|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-322 |
1.60e-122 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 356.04 E-value: 1.60e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 1 MSPLVSSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANL 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGQWDITQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTlHTPTILSLALL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 161 STLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTM 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 241 MILALLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGYLTSLIIAPNTNMTKLNWRLKPN 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
..
gi 52220998 321 HP 322
Cdd:MTH00135 320 QL 321
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-322 |
1.20e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 353.74 E-value: 1.20e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 1 MSPLVSSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANL 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGQWDITQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLALL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 161 STLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTM 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 241 MILALLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGYLTSLIIAPNTNMTKLNWRLKPN 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
..
gi 52220998 321 HP 322
Cdd:MTH00112 321 KN 322
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-320 |
8.62e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 331.50 E-value: 8.62e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 1 MSPLVSSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANL 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGQWDITQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLALL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 161 STLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTM 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 241 MILALLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGYLTSLIIAPNTNMTKLNWRLKPN 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-322 |
1.57e-103 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 307.93 E-value: 1.57e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 1 MSPLVSSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANL 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGQWDITQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLALL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 161 STLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTM 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 241 MILALLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGYLTSLIIAPNTNMTKLNWRLKPN 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
..
gi 52220998 321 HP 322
Cdd:MTH00105 321 KP 322
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-320 |
2.19e-88 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 269.15 E-value: 2.19e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 1 MSPLVSSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANL 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGQWDITQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLALL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 161 STLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTM 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 241 MILALLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGYLTSLIIAPNTNMTKLNWRLKPN 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-316 |
8.79e-82 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 252.54 E-value: 8.79e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 1 MSPLVSSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANL 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGQWDITQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLALL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 161 STLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTM 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 52220998 241 MILALLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGYLTSLIIAPNTNMTKLNWR 316
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWR 316
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-274 |
6.37e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 180.08 E-value: 6.37e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 1 MSPLVSSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANL 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGQWDItqlttqpaITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILS-LAL 159
Cdd:MTH00144 81 SFSWFS--------MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCvISV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 160 LSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPT 239
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKT 232
|
250 260 270
....*....|....*....|....*....|....*
gi 52220998 240 MMILALLtLISLGGLPPLSGFAPKWLILTELTTWH 274
Cdd:MTH00144 233 GLSIISL-LLSLGGLPPFLGFCSKLLVLISSMESS 266
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-314 |
4.26e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 178.09 E-value: 4.26e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 1 MSPLVSSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANL 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGqwditqLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLqtaHTLHTPTILSLALL 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLS---YLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 161 STLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTM 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 52220998 241 MILALLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGYLTSLIIAPNTNMTKLN 314
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK 306
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
6-271 |
9.92e-46 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 158.79 E-value: 9.92e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 6 SSMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILnanltgQWD 85
Cdd:MTH00011 8 MFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 86 ITQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLALLSTLIG 165
Cdd:MTH00011 82 FPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 166 GWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTMMILAL 245
Cdd:MTH00011 162 GLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLF 241
|
250 260
....*....|....*....|....*.
gi 52220998 246 LTLISLGGLPPLSGFAPKWLILTELT 271
Cdd:MTH00011 242 IMLLSLGGLPPFTGFMPKLMAIETLT 267
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
7-298 |
1.71e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 147.51 E-value: 1.71e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 7 SMMLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANltgqwdi 86
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFS------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 87 TQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPsaLLLQTAHTLHTPTILSLALLSTLIGG 166
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 167 WGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTMMILALL 246
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 52220998 247 TLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGY 298
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
6.48e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 127.06 E-value: 6.48e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 13 VAAGTIIAASTHHWLLAWMGLELNTLAILPLLATS-HTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVALKrDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 88 QLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTlhTPTILSLALLSTLIGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPV--TNVVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 168 GGLNQTQLRKLLAFSSIAHLGWMMSIITMNT----DLMLLTLTIYIIMTTTMFSIILT-SHTKSL-KDMTMMSSINPTMM 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFSIILSlKLTKGLiVEVSGLSRKNPVIA 343
|
250 260
....*....|....*....|....*.
gi 52220998 242 ILALLTLISLGGLPPLSGFAPKWLIL 267
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
25-280 |
1.91e-32 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 122.42 E-value: 1.91e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 25 HWLLAWMGLELNTLAILPLLA-TSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQP---------- 93
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALtgglnssgll 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 94 -AITMLTLALMMKLGLAPMHAWLPEVMQGTPTQM-AFIMATWQKLAPSAL-----LLQTAHTLHTPTILSLALLSTLIGG 166
Cdd:pfam00361 83 lLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLirrslLYLPSSPFIQQILLILAIISMLLGS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 167 WGGLNQTQLRKLLAFSSIAHLGWMMSIITMNT----DLMLLTLTIYIIMTTTMFSIIL-----TSHTKSLKDMTMMSSIN 237
Cdd:pfam00361 163 LAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygiQAAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAKTM 242
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 52220998 238 PTMMILALLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMAT 280
Cdd:pfam00361 243 PILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
7-270 |
5.60e-32 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 124.84 E-value: 5.60e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 7 SMMLSSVAaGTIIAASTHHWLLAWMGLELNTLAILPLLA-TSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWD 85
Cdd:COG1007 106 ALLLFATL-GMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 86 ITQL-----TTQPAITMLTLALMM-------KLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLH--- 150
Cdd:COG1007 185 LAGIaaalaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFpgl 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 151 ----TPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDL----MLLTLTIYIIMTTTMFSIIL-- 220
Cdd:COG1007 265 aadwQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFAVILll 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 52220998 221 ---TSHTKSLKDMTMMSSINPTMMILALLTLISLGGLPPLSGFAPKWLILTEL 270
Cdd:COG1007 345 srkGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA 397
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
4.98e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 120.52 E-value: 4.98e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 13 VAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSH-TPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDI----- 86
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRgSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLsyinl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 87 --------TQLTTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAhtLHTPTILSLA 158
Cdd:MTH00196 82 vlnsgqsfSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIG--LNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 159 LLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNT----DLMLLTLTIYIIMTTTMFSIILTSHTKS--LKDMTM 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270
....*....|....*....|....*....|....*
gi 52220998 233 MSSINPTMMILALLTLISLGGLPPLSGFAPKWLIL 267
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-267 |
2.44e-30 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 120.31 E-value: 2.44e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 8 MMLSsvAAGTIIAASTHHWLLAWMGLELNTLAiLPLLATSH--TPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWD 85
Cdd:PRK05777 109 VLFA--LLGMMVMVSANDLLTLFLGLELLSLP-LYALAALRrdRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 86 ITQLTTQPA------------ITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLL-------QTA 146
Cdd:PRK05777 186 FAGIAKALAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvvafGGL 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 147 HTLHTPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDL----MLLTLTIYIIMTTTMFSIILTS 222
Cdd:PRK05777 266 SEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAFGVISLL 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 52220998 223 HTK-----SLKDMTMMSSINPTMMILALLTLISLGGLPPLSGFAPKWLIL 267
Cdd:PRK05777 346 RRKggeaeSISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVF 395
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
15-268 |
5.40e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 110.24 E-value: 5.40e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 15 AGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQL----- 89
Cdd:COG0651 118 AGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarla 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 90 -----TTQPAITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMA-TWQKLAPSALLL-------QTAHTLHTPTILS 156
Cdd:COG0651 198 eldpgLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSgLLTKVGVYAILRvltllfgADPALFLGTLLLV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 157 LALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYII----MTTTMF----SIILTSHTKSLK 228
Cdd:COG0651 278 LGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFlaagAIERATGTRDLD 357
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 52220998 229 DMTMMSSINPTMMILALLTLISLGGLPPLSGFAPKWLILT 268
Cdd:COG0651 358 KLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
4.42e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 97.24 E-value: 4.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 13 VAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAI---------EATTKYFLIQAAASSMLLFASILNANLTGQ 83
Cdd:MTH00198 197 VGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGN 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 84 -------WDITQLTTQPAIT-------MLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLapSALLLQTAHTL 149
Cdd:MTH00198 277 egmlgtiLSATLETTNIELRqgslgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVI 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 150 HTPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLT----LTIYIIMTTTMFSIILT---- 221
Cdd:MTH00198 355 TSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAswtyAVTYLVSALASFTVICTleef 434
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 52220998 222 -----------------SHTKSLKDMTMMSSINPTMMILALLTLISLGGLPPLSGFAPKWLIL 267
Cdd:MTH00198 435 gtrtptsrqrdgsfgnyNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-270 |
5.10e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 90.71 E-value: 5.10e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 33 LELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQP--------AITMLTLALMM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenptvvtAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 105 KLGLAPMHAWLPEVMQGTPTQ-MAFIMATWQKLAPSALLLQTAHTLHTPT---------ILSLALLSTLIGGWGGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVvTALLSGLVTKVAVYALIRIYFTVFGGDFrfalglgwlLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 175 LRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYI----IMTTTMF----SIILTSHTKSLKDMTMMSSINPTMMILALL 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALFlaagAIEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260
....*....|....*....|....
gi 52220998 247 TLISLGGLPPLSGFAPKWLILTEL 270
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGA 398
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-260 |
9.73e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 83.90 E-value: 9.73e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 51 RAIEATTKYFLIQAAASSMLLFA---------------SILNANLTGQwditqlTTQPAITMLTLALMM-----KLGLAP 110
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGfswlyglsggeielqEIVNGLINTQ------MYNSPGISIALIFITvgigfKLSLAP 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 111 MHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPT------ILS-LALLSTLIGGWGGLNQTQLRKLLAFSS 183
Cdd:CHL00049 233 FHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSsnewhlLLEiLAILSMILGNLIAITQTSMKRMLAYSS 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 184 IAHLGWMM-SIITMNTDL----MLLTLTIYIIMTTTMFSII----LTSHTKSLKDMTMMSSINPTMMILALLTLISLGGL 254
Cdd:CHL00049 313 IGQIGYVIiGIIVGDSNDgyasMITYMLFYIFMNLGTFACIvlfgLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGI 392
|
....*.
gi 52220998 255 PPLSGF 260
Cdd:CHL00049 393 PPLAGF 398
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
35-260 |
9.02e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 81.25 E-value: 9.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 35 LNTLAILPLLATSHT---PRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQPAITMLTLALMM------- 104
Cdd:PRK02504 139 LETLSIASYLLTGYMkrdPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGSTQLSAIALALITSPSLGLALalvfvia 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 105 ----KLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSAL---LLQTA--------HTLHTptilSLALLSTLIGGWGG 169
Cdd:PRK02504 219 giafKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAfpsfdeqwKLLFT----ALAILSMVLGNVVA 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 170 LNQTQLRKLLAFSSIAHLGWMMSIITMNTD----LMLLTLTIYIIMTTTMFS-IILTS---HTKSLKDMTMMSSINPTMM 241
Cdd:PRK02504 295 LAQTSMKRMLAYSSIGQAGFVMIGLVAGTEagyaSMVFYLLAYLFMNLGAFAcVILFSlrtGTDQISDYAGLYQKDPLLT 374
|
250
....*....|....*....
gi 52220998 242 ILALLTLISLGGLPPLSGF 260
Cdd:PRK02504 375 LGLSLCLLSLGGIPPLAGF 393
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.03e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 71.67 E-value: 1.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 33 LELNTLAILPLLATSH-TPRAIEATTKYFLIQAAASSMLLFASILnanLTGQWDI-------------TQLTTQPAITML 98
Cdd:PRK08376 150 LEIMSIASYALVAFRNdTWEAIEAGIKYMFVGSLASSMVLLGIAL---LYGQYGTlnmaylavkmsenPTVVAKIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 99 TLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATwQKLAPSALLLQTAHTLHTPT---------ILSLALLSTLIGGWGG 169
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLV-IKQAGLYALARVLFSIYGPAinlatvgwvIIILGCLTMFVGVAMA 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 170 LNQTQLRKLLAFSSIAHLGWMM-----------SIITMNTDLMLLTLTIYIIMTTTMF---------SIILTSHTKSLKD 229
Cdd:PRK08376 306 VVQKDVKRLLAYHSVSQIGYMLlglgvglaalgDPAMASYGEIALAGGIYHIVNHALYkallfltagAVIYETGTRNLNE 385
|
250 260 270
....*....|....*....|....*....|....*..
gi 52220998 230 MTMMSSINPTMMILALLTLISLGGLPPLSGFAPKWLI 266
Cdd:PRK08376 386 LGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
54-279 |
2.05e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.10 E-value: 2.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 54 EATTKYFLIQAAASSMLLFASILNANLTGQWDI----------TQLTTQPAITMLTLAL-MMKLGLAPMHAWLPEVMQGT 122
Cdd:PRK08668 147 KASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFadisqglindTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEA 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 123 PTQM------------AFIMATWQKLAPSALLLQTAHTLHTPTILS-----LALLSTLIGGWGGLNQTQLRKLLAFSSIA 185
Cdd:PRK08668 227 PQSFsavlsgqlsklgAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNyilawLGNISIIVGTLMAILQEDIKKLIAYSSVA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 186 HLGWMMSIITMNTDLMLLTLTIYII---MTTTMF-----SIILTSHTKSLKDMTMMSSINPTMMILALLTLISLGGLPPL 257
Cdd:PRK08668 307 NGGYILVGLGLGTSLGFAGGLFHVFnhaLFKGLFflifaAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPM 386
|
250 260
....*....|....*....|..
gi 52220998 258 SGFAPKWLILTELTTWHLPAMA 279
Cdd:PRK08668 387 SGFASKWLIFEALISKGMPITA 408
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-279 |
9.98e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 65.94 E-value: 9.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 48 HTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQ-------PAITMLTLALMM----KLGLAPMHAWLP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAaptilssPLLTLILLLLLLgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 117 EVMQG-TP-----------TQMAFIMAtwqKLAPsaLLLQTAHTLHTptILSLALLSTLIGGWGGLNQTQLRKLLAFSSI 184
Cdd:COG1009 236 DAMEGpTPvsallhaatmvKAGVYLLA---RLSP--LFALSPVWLTV--VAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 185 AHLGWMMSIITMNTdlmlLTLTIYIIMTTTMF---------SIILTSHTkslKDMTMMSSINPTMMILALLTLI---SLG 252
Cdd:COG1009 309 SQLGYMFLALGVGA----YVAALFHLLTHAFFkallflgagSVIHATGT---RDIRKMGGLRKKMPITAITFLIgalSLA 381
|
250 260
....*....|....*....|....*..
gi 52220998 253 GLPPLSGFAPKWLILTELTTWHLPAMA 279
Cdd:COG1009 382 GIPPFAGFFSKEAILEAALEAGGLGPL 408
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
50-267 |
1.52e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 65.10 E-value: 1.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 50 PRAIEATTKYFLIQAAASSMLLFASILNANLTGQW--DITQLTTQP--------AITMLTLALMMKLGLAPMHAWLPEVM 119
Cdd:COG1008 157 ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPlpltaqllLFLAFFIAFAVKVPMFPFHTWLPDAH 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 120 QGTPTQMAFIMAtwqklapsALLLQT---------------AHTLHTPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSI 184
Cdd:COG1008 237 VEAPTAGSVLLA--------GVLLKMggygllrfalplfpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 185 AHLGWMMSIITMNTDLMLLTLTIYII----MTTTMFSII----LTSHTKSLKDMTMMSSINPTMMILALLTLISLGGLPP 256
Cdd:COG1008 309 SHMGFVLLGIFALNPLGLQGAVLQMVshglITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
250
....*....|.
gi 52220998 257 LSGFAPKWLIL 267
Cdd:COG1008 389 TSGFVGEFLVL 399
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-278 |
1.71e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 64.97 E-value: 1.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 33 LELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQP--AITMLTLALMMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADpeAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 111 MHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHT--PTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGldLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 189 WMMSIITMNTdlmLLTLTiYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTMMILALLTLiSLGGLPPLSGFAPKWLILT 268
Cdd:PRK07234 283 FILAAPLVGG---LYALA-HGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMASF-SIAGFPLLAGFVSKVLTLK 357
|
250
....*....|
gi 52220998 269 ELTTWHLPAM 278
Cdd:PRK07234 358 NLLPWQAIAL 367
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
9-268 |
3.53e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 64.18 E-value: 3.53e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 9 MLSSVAAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASIL----NANLTGQW 84
Cdd:PRK06458 113 MYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTILvyanAATVMGDG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 85 DITQLTTQ---------PAITMLTLALMM-----KLGLAPMHAWLPEVMQGTPTQMAFIM-------ATWQKLAPSALLL 143
Cdd:PRK06458 193 EMAILWTEllkhaslldPTLMKLAFVFLLigfgtKVGLFPMHAWLPDAHSEAPSPVSALLsgvllnvALYAVLRYYILID 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 144 QTAHTLHTPTILS-LALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDL----MLLTLTIYIIMTTTMF-- 216
Cdd:PRK06458 273 AAIGSDFPGRLLLiFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAIFfa 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 52220998 217 --SIILTSHTKSLKDMTMMSSINPTMMILALLTLISLGGLPPLSGFAPKWLILT 268
Cdd:PRK06458 353 sgNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-299 |
4.44e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 60.76 E-value: 4.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 50 PRAIEATTKYFLIQAAASSMLLFASI-------------LNANLTGQWDITQ--------LTTQPAITMLTLALMMKLGL 108
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAflyatfgtlnmadLSAKIRGLSFPLTgglagnppLALGVALALALWAFTIKAAI 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 109 APMHAWLPEVMQGTPTQMAFIMA--------------TWQKLAPSALLLQTAHTLhTPTILSLALLSTLIGGWGGLNQTQ 174
Cdd:PRK12667 240 FPNHFWLPDAHPAAPSPVSAMLSglvvnvgayaiirfLYTIFGISPSLIDFRAAL-SPILIILGAVSAIIGALMMVVQKD 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 175 LRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYII----------MTTTMFsiILTSHTKSLKDMTMMSSINPTMMILA 244
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVF--IHAAGTRDIDELAGLGRKMPIASFAF 396
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 52220998 245 LLTLISLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFYIRLGYL 299
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
43-263 |
1.03e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.60 E-value: 1.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 43 LLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLT---------TQPAI-TMLTLALMMKLGLAPMH 112
Cdd:PRK12665 150 LLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAvrldelpsgTRTALfAVLLVAFGIKAAVFPLS 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 113 AWLPEvmqGTPTQMAFIMATW----QKLAPSAL-----LLQTAHTLHTPtILSLALLSTLIGGWGGLNQTQLRKLLAFSS 183
Cdd:PRK12665 230 FWLPD---SYPTAPAPVTAVFagllTKVGVYAIirthtLLFPGGGLDTL-LMVVALLTMVVGILGAIAQSDIKRLLSFTL 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 184 IAHLGWMMSIITMNTDLMLLTLTIY----IIMTTTMFS----IILTSHTKSLKDMTMMSSINPTMMILALLTLISLGGLP 255
Cdd:PRK12665 306 VSHIGYMVFGIALSTVAGLSGAIYYvahhITVQTTLFLvvglIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIP 385
|
....*...
gi 52220998 256 PLSGFAPK 263
Cdd:PRK12665 386 PFSGFIGK 393
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
28-270 |
7.45e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 53.61 E-value: 7.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 28 LAWMGLELNTLAILPLLATSHTPRAIEATTKYFLIqaAASSML--------LFASILNANLTGQWDITQLTTQ-----PA 94
Cdd:PRK08676 126 LFWIFAELTTVFSAMLIAILSARENIDAALKYIFI--ASTAMIfafiglifLFSLTRQALGTGTLNWTELAAHasllsPS 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 95 ITMLTLALMM-----KLGLAPMHAWLPEVMQGTPTQMAFIMA-------TWQKLAPSALLLQT-AHTLHTPTILSLALLS 161
Cdd:PRK08676 204 VLGASFLFIFigflaKSGLVPFHTWLPAAYAKAPSVVSALLSgtvlnigIYGILRLSALLRQSgAAEQFSNVLIGLGIFS 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 162 TLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLL-----TLTIYIIMTTTMFSI-ILTSHTKS--LKDMTMM 233
Cdd:PRK08676 284 IAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlfhMLAHSLVKSGLFFSAgILHRQYRSdrFDRIFDV 363
|
250 260 270
....*....|....*....|....*....|....*..
gi 52220998 234 SSINPTMMILALLTLISLGGLPPLSGFAPKWLILTEL 270
Cdd:PRK08676 364 FRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-263 |
2.13e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.62 E-value: 2.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 75 ILNANLTGQWDITQLTTQP--------AITMLTLALMMKLGLAPMHAWLPEVMQG-TPTQMAFIMATWQK--------LA 137
Cdd:PRK12644 178 IILGQAAGTYRLSELLADPptgpavsvAVVLILVGALSKSAIVPFHFWLPGAMAApTPVSAYLHAAAMVKagiylvarLA 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 138 PSALLLQTAHtlhtPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNT-DLMLLTLTiyIIMTTTMF 216
Cdd:PRK12644 258 PGFADVPVWR----PTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTrDAALAGLA--MLLAHALF 331
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 52220998 217 SIIL---------TSHTKSLKDMTMMSSINPTMMILALLTLISLGGLPPLSGFAPK 263
Cdd:PRK12644 332 KAALflvvgiidhSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
58-271 |
2.53e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 52.45 E-value: 2.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 58 KYFLIQAAASSMLLFASILNANLTGQWDITQLTTQ-----------PAITMLTLALMMKLGLAPMHAWLPEVMQG-TPTQ 125
Cdd:PRK12646 165 QSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQadhiknhglfiPMIFMFLLGAFTKSAQFPFHIWLPRAMAApTPVS 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 126 MAFIMATWQKlAPSALLLQTAHTL-----HTPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDL 200
Cdd:PRK12646 245 AYLHSATMVK-AGIFLLFRFTPLLglsnmYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGY 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 201 -------------MLLTLTIYIIMTTTMFSIIL---------TSHTKSLKDMTMMSSINPTMMILALLTLISLGGLPPLS 258
Cdd:PRK12646 324 aqhqqdaiasiyvFVLFAALFHLMNHAIFKCALfmgvgiidhEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLN 403
|
250
....*....|...
gi 52220998 259 GFAPKWLILTELT 271
Cdd:PRK12646 404 GFLSKEMFLDALT 416
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
15-279 |
3.61e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 51.81 E-value: 3.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 15 AGTIIAASTHHWLLAWmglELNTLAILPLLATSHTPRAI-EATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQP 93
Cdd:PRK06521 127 VLVLLADDAFSFLVAW---ETMSLSSWFLVIANHREAEIrRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAH 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 94 -----AITMLTLALM---MKLGLAPMHAWLPEVMQGTPTQMAFIM-ATWQKLAPSALLLQTAHTLHTPT------ILSLA 158
Cdd:PRK06521 204 lspfwASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMsGVMLKVAIYGILRVVFDLLGAPGwwwgvlVLALG 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 159 LLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMM-----SIITMNTDLML-----LTLTIYIIMTTTMF---------SII 219
Cdd:PRK06521 284 AISAVLGVLYALAEHDLKRLLAYSTIENIGIIFvglglAMVFIAYGMPLlaalaLTAALYHLLNHALFksllflgagAVL 363
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 52220998 220 LTSHTKslkDMTMMSSINPTMMILALLTLI---SLGGLPPLSGFAPKWLIL-TELTTWHLPAMA 279
Cdd:PRK06521 364 HATGTR---DMEKLGGLIRRMPWTAWAFLIgclAISALPPLNGFVSEWLLLqSLLSSPGLPQWG 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-274 |
5.34e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 51.08 E-value: 5.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 100 LALMMKLGLAPMHAWLPEVMQGTPTQMAFIMA-TWQKLAPSAL------LLQTAHTLHTPTILSLALLSTLIGGWGGLNQ 172
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAgILLKLGGYGLvrlswpILPLGAQNLAPAVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 173 TQLRKLLAFSSIAHLGwMMSIITMNTDLMLLTLTIYIIMTTTMFSIIL---------TSHTKSLKDMTMMSSINPTMMIL 243
Cdd:MTH00226 318 IDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLfilvtilydRHHTRLIKYYRGLSITMPIWGTI 396
|
170 180 190
....*....|....*....|....*....|.
gi 52220998 244 ALLTLISLGGLPPLSGFAPKWLILTELTTWH 274
Cdd:MTH00226 397 MIVTSLANVAVPPSGNFIGEYLSILSSFNWN 427
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
28-268 |
1.00e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.43 E-value: 1.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 28 LAWmglELNTLAILPLLATShTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQPA---ITMLTLALMM 104
Cdd:PRK12650 137 VAW---ELVSLASFFLIARS-GSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaeKPGLTTVVAV 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 105 KLGLA--------PMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLALLST-----LIGGWGGLN 171
Cdd:PRK12650 213 LIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVgmitaLMGAVFAVQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 172 QTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYII----MTTTMFSII-LTSHTKSLKDMTMMSSINPTMMI---L 243
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLahalFKSSLFMLIgVVDHQAGTRDIRRLGSLWRRMPFtfvS 372
|
250 260
....*....|....*....|....*
gi 52220998 244 ALLTLISLGGLPPLSGFAPKWLILT 268
Cdd:PRK12650 373 VTIAALSMAAVPPLFGFVSKEGMLT 397
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
1.82e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 49.35 E-value: 1.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 33 LELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQL-----------TTQPAITMLTLA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 102 LMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLH-----------TPTILSLALLSTLIGGWGGL 170
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFkanfvfttlpfNNVFMILAALAIVFGSVLAI 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 171 NQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYII----MTTTMF----SIILTSHTKSLKDMTMMSSINPTMMI 242
Cdd:PRK12662 299 LSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFmvsgSISYHFGTTKLEDCLNLWKSMPKITL 378
|
250 260
....*....|....*....|....*
gi 52220998 243 LALLTLISLGGLPPLSGFAPKWLIL 267
Cdd:PRK12662 379 AFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
43-268 |
2.25e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.18 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 43 LLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQ-------PAITMLT----LALMMKLGLAPM 111
Cdd:PRK12663 147 LITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRlndmgdtATLTTIAllflLAFGMKAALFPF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 112 HaWLPEVMQGTPTQMAFIMAT-WQKLAPSAL-------LLQTAHTLHtPTILSLALLSTLIGGWGGLNQTQLRKLLAFSS 183
Cdd:PRK12663 227 M-WLPAAYHTPNTEVAALFAAlLTKVGIYALirvftllFPQERELLH-PLLATMAAITMVIGALGALAYKDIRRIAGYQV 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 184 IAHLGWMMSIITMNTDLMLLTLTIY----IIMTTTMF----SIILTSHTKSLKDMTMMSSINPTMMILALLTLISLGGLP 255
Cdd:PRK12663 305 ISSIGFILLGLALGTPAGINGAIFYlvhdMVVKTALFliagSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLP 384
|
250
....*....|...
gi 52220998 256 PLSGFAPKWLILT 268
Cdd:PRK12663 385 PFSGFWGKVLLVQ 397
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-316 |
4.18e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.53 E-value: 4.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 105 KLGLapmHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTL-HTPTILSLAL----LSTLIGGWGGLNQTQLRKLL 179
Cdd:MTH00020 226 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFeQAPLALIIVTivgsLTVFFAATVGLVQNDLKKVI 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 180 AFSSIAHLGWMMsiitMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSL-------KDMTMMSSIN---PTMMILALLTLI 249
Cdd:MTH00020 303 AYSTCSQLGYMV----VACGLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeQDMRKMGGLIsflPLTYIFFLIGSL 378
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 52220998 250 SLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFY-IRLGYLTSLiiaPNTNMTKLNWR 316
Cdd:MTH00020 379 SLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYsIRLIYLTFL---SNTNLKKAVFF 443
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
70-271 |
4.20e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 48.38 E-value: 4.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 70 LLFASILNANLTGQWDITQLTTQ----------PAITMLTLA-LMMKLGLAPMHAWLPEVMQG-TPTQMAFIMATWQKlA 137
Cdd:PRK12647 162 LLAGLILLGNVTGTYSLSELLASgdvirehplyLAILLLVLGgAFTKSAQFPFHFWLPNAMEApTPVSAYLHSATMVK-A 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 138 PSALLLQTAHTL-HTP---TILSLA-LLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYIIMT 212
Cdd:PRK12647 241 GIYLLARLNPVLgGTPlwqTILPLFgGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAH 320
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 52220998 213 T----TMFSIILT-SHTKSLKDMTMMSSINPTMMI---LALLTLISLGGLPPLSGFAPKWLILTELT 271
Cdd:PRK12647 321 SlykgALFMVAGIiDHETGTRDITKLGGLRRAMPItaaAALLAALSMAGLPPLFGFLAKELIYEALL 387
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
5.27e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 47.89 E-value: 5.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 50 PRAIEATTKYFLIQAAASSMLLFASI----LNANLTGQWDITQLTTQP----AITMLTLALMM----KLGLAPMHAWLPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPlppgVQYWLFLAFFIafavKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 118 VMQGTPTQMAFIMA-TWQKLAPSALL------LQTAHTLHTPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGW- 189
Cdd:PRK05846 237 AHVQAPTAGSVLLAgILLKMGAYGLLrfslplFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFv 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 190 MMSIITMNTdLMLLTLTIYII----MTTTMFSII--LTSHTKSlKDMTMMSSINPTMMILALLTLISLG---GLPPLSGF 260
Cdd:PRK05846 317 TLGIFAGNQ-LGIQGAIFQMIshglSSAALFLLVgvLYDRLHT-RDIADYGGLAKVMPVLAAFFLFFAMaslGLPGTSGF 394
|
....*..
gi 52220998 261 APKWLIL 267
Cdd:PRK05846 395 VGEFLIL 401
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
15-270 |
7.17e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 47.80 E-value: 7.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 15 AGTIIAASTHHWLLAWmglELNTLAILPLLATSHT-PRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQP 93
Cdd:PRK08667 125 LGVVASANTFSFLFFW---EIMALSSFFLVMNDYQeEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 94 AITMLT-----LALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTP------TILSLALLST 162
Cdd:PRK08667 202 GILSLVflllfLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPelwwgvLILLAGSISA 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 163 LIGGWGGLNQTQLRKLLAFSSIAHLGWMMS------IITMNTDLMLLTLTI---------YIIMTTTMF----SIILTSH 223
Cdd:PRK08667 282 LLGVIYALKEHDLKGLLAYSSIENIGIILMgiglyvIFGVYGLDTLALLALggalfhslnHALFKSLLFltagSVVHATG 361
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 52220998 224 TKSLKDMTMMSSINPTMMILALLTLISLGGLPPLSGFAPKWLILTEL 270
Cdd:PRK08667 362 TRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESF 408
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
7.70e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.52 E-value: 7.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 48 HTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQPAIT---------MLTLALMM-----KLGLAPMHA 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplfLITLILIFigaaaKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 114 WLPEVMQGtPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLALLS------TLIGGWGGLNQTQLRKLLAFSSIAHL 187
Cdd:PRK12649 236 WLPNAMEA-PTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSgtgmitMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 188 GWMMSIITMNT----DLMLLTLTIYIIMTTTMFSII-----LTSHTKSLKDMTMMSSIN---PTMMILALLTLISLGGLP 255
Cdd:PRK12649 315 AYLMTMYGYTTyhepGLGVAAATFHLLNHATFKACLflvagIVAHEAATRDIRKLGGLRkemPITFIVASIAALAMAGIP 394
|
....*...
gi 52220998 256 PLSGFAPK 263
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-261 |
1.23e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 46.95 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 55 ATTKYFLIQAAASSMLLFASILNANLTGQ--WDITQLTTQPAITMLTL--------ALMMKLGLAPMHAWLPEVMQGTPT 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAKSYPLALELllyagfliAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 125 QMAFIMA-TWQKLAPSAL------LLQTAHTLHTPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMN 197
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALirfnvqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAF 297
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 52220998 198 TDL-----MLLTLTIYIIMTTTMFSIILT---SHTKSLKDMTMMSSINPTmmILALLTLISLG--GLPPLSGFA 261
Cdd:PRK12561 298 TDLgisgaMLQMISHGLIAAALFFLTGVTyerTHTLSIPNMGGLAKVMPK--TFALFTASSMAslALPGMSGFV 369
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
33-267 |
2.44e-05 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 45.91 E-value: 2.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 33 LELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQL-----TTQPAITMLTLALMMkLG 107
Cdd:PRK08377 137 MEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIaqlagTIDPTVAQVGLALLI-FG 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 108 LA------PMHAWLPEVMQGTP---TQM--AFIM-ATWQKLAPSALLLQTAHTLHTPT--ILSLALLSTLIGGWGGLNQT 173
Cdd:PRK08377 216 LAveaelfPLNAWAPDAYQAAPhpiTVMfsAFVVkAGLYAMARILYLMQNANGWSSVLklVIIMATLTVFFAELSALRQK 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 174 QLRKLLAFSSIAHLGWMMSIITMNTDL--------MLLTLTIYIIMTTTMFSIILTSHTKSLKDMTMMSSINPTMMILAL 245
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
250 260
....*....|....*....|..
gi 52220998 246 LTLISLGGLPPLSGFAPKWLIL 267
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRII 397
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-267 |
3.64e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 45.53 E-value: 3.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 82 GQWDITQLTTQP----AITMLTLALMMKLGLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLH-----TP 152
Cdd:MTH00207 165 GHWSITNMWQTDmnnyIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSstywfNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 153 TILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNtdlmLLTLTIYIIMTTTMFSIIL----------TS 222
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLG----MPKLALFHLITHALFKALLfvcagslihsHH 320
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 52220998 223 HTKSLKDMTMMSSINPTMMILALLTLISLGGLPPLSGFAPKWLIL 267
Cdd:MTH00207 321 HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLIL 365
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
4-270 |
6.27e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.78 E-value: 6.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 4 LVSSMMLSSVAAGTIIAASTHH--WLLAWMGLELNTLAILPLLATSHTPRAIeattkyFLIQAAASSMLLFA-SILNANL 80
Cdd:PRK06459 73 WLSSLYILTILGMAIVLTSDNYllFLAGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAgFAWAFII 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 81 TGQWDITQLTTQPAITMLTLALMMKLGLAPMH--AWLPEVMQGTPTQMAFIM-ATWQKLAPSALLLQTAHTLHTP----- 152
Cdd:PRK06459 147 SGTTNFSYLPSPVPLILASFGFIIKMGMMPFLvsEWLPIAHGNAPSNFSAILsATMTLMGVYGILKMTILTQTIPigyfg 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 153 -TILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIIT--MNTDLMLLTLTIYIIMTTTMFS---------IIL 220
Cdd:PRK06459 227 lTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGlyMVTKQLITSIEHFSLITVILYSfahsvaktgLFL 306
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 52220998 221 TSHTKSLKDMTMMSSINPTMMIL-ALLTLISLGGLPPLSGFAPKWLILTEL 270
Cdd:PRK06459 307 SSGLQEKQSITYSKKIRNRWIELgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-266 |
6.32e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 44.64 E-value: 6.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 34 ELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQ----LTTQPAITMLTLALMMKL--- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnaLLVNPTSPVIYGGLLLLIfgl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 107 ----GLAPMHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTLHTPT--------ILSLALLSTLIGGWGGLNQTQ 174
Cdd:PRK06277 210 lygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLSyfpsaqgvLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 175 LRKLLAFSSIAHLGWMMSIITMNTDLM----LLTLTIYIIMTTTMF----SIILTSHTKSLKDMTMMSSINPTMMILALL 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFlgagIVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260
....*....|....*....|
gi 52220998 247 TLISLGGLPPLSGFAPKWLI 266
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLML 389
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-266 |
7.50e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.17 E-value: 7.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 104 MKLGLAPMHAWLPEVMQGTPTQM-AFIMATWQKLAPSA------LLLQTAHTLHTPTILSLALLSTLIGGWGGLNQTQLR 176
Cdd:PRK07691 221 TKAGLFPLYFWLPGSYYAPPIAIaALFGALLTKVGVYAiartftLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 177 KLLAFSSIAHLGWMMSIITMNTDLMLLTLTIY----IIMTTTMF----SIILTSHTKSLKDMTMMSSINPTMMILALLTL 248
Cdd:PRK07691 301 KIIIYNIMIAVGVILVGVAMMTESGMIGAIYYlihdMIVKAALFlligIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAA 380
|
170
....*....|....*...
gi 52220998 249 ISLGGLPPLSGFAPKWLI 266
Cdd:PRK07691 381 LSLAGIPPLSGFYGKFFI 398
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-271 |
1.21e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.79 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 111 MHAWLPEVMQGtPTQMAFIMATWQKLAPSALLLQTAHTLHTPTILSLAL------LSTLIGGWGGLNQTQLRKLLAFSSI 184
Cdd:MTH00032 244 LHTWLPDAMEG-PTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIitifgaLTAFFAATVGLVQNDLKKVIAYSTC 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 185 AHLGWMMSIITM--NTDLMLLTLTIYIIMTTTMF---SIILTSHTKSLKDMTMMSSI---NPTMMILALLTLISLGGLPP 256
Cdd:MTH00032 323 SQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFlsaGSVIHSTTVDEQDMRKMGGLihsIPFTYTMMLIGSFSIMGLPY 402
|
170
....*....|....*
gi 52220998 257 LSGFAPKWLILtELT 271
Cdd:MTH00032 403 LTGFYSKDLIL-ELT 416
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
3.71e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.11 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 33 LELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLF-ASILNANLTGQWDITQLTTQPAITMLTLALMMKLGLA-- 109
Cdd:PRK06589 145 YELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLpAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAkt 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 110 ---PMHAWLPEVM-----------------QGTPTQMAFIMATWqKLAPSALLLQTAHTLHTPTILSLALLSTLiggwgG 169
Cdd:PRK06589 225 aifPVHSWLPAAMvahypvsallhavivvkTGLFCIYKILLYIF-GLSYLQRIFAEFNWLIFIPIVSIFYSSLK-----A 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 170 LNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIY--------IIMTTTMFSIILTSHTKSLKDMTMMSSINPTMM 241
Cdd:PRK06589 299 LKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHlvshsfakICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLIS 378
|
250 260
....*....|....*....|....*.
gi 52220998 242 ILALLTLISLGGLPPLSGFAPKWLIL 267
Cdd:PRK06589 379 FIISISSLSLIGIPIFSGFISKFLIL 404
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
14-210 |
5.24e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 41.61 E-value: 5.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 14 AAGTIIAASTHHWLLAWMGLELNTLAILPLLATSHTPRAIEATTKyFLIQAAASSMLLFASILN-ANLTG----QWDITQ 88
Cdd:PRK06473 117 NAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATK-FLLYTAISGILILVSFLGlVWLSGassfDYEPLR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 89 LTTQPAITMLTL------ALMMKLGLAPMHAWLPEVMQGTPTQMAFIMA-------TWQKLAPSALLLQTAHTLHTPTIL 155
Cdd:PRK06473 196 SHTLPLSTQLLLlapilvGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAgvllklgTYGLLRFGVGLFPEAWVYLAPWLA 275
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 52220998 156 SLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLMLLTLTIYII 210
Cdd:PRK06473 276 TWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMI 330
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-316 |
9.44e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 41.15 E-value: 9.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 105 KLGLapmHAWLPEVMQGTPTQMAFIMATWQKLAPSALLLQTAHTL-HTPTILS----LALLSTLIGGWGGLNQTQLRKLL 179
Cdd:MTH00210 227 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFeGSPLALTivtiLGALTAFFAATVGVVQNDLKKVI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 180 AFSSIAHLGWMmsiiTMNTDLMLLTLTIYIIMTTTMFSIILTSHTKSL-------KDMTMMSSINPTMMILALLTLI--- 249
Cdd:MTH00210 304 AYSTCSQLGYM----VMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVihavsdeQDMRKMGGLIKSIPFTYVMILIgsl 379
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 52220998 250 SLGGLPPLSGFAPKWLILTELTTWHLPAMATLMALASLLSLAFY-IRLGYLTSLIiapNTNMTKLNWR 316
Cdd:MTH00210 380 SLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYsIRLIYLTFIT---NTNSKKEVFI 444
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-267 |
1.28e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.78 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 110 PMHAWLPEVMQGtPTQMAFIMATWQKLAPSALLLQTAHTL--HTPTILSL-ALLSTL---IGGWGGLNQTQLRKLLAFSS 183
Cdd:PRK07376 245 PLHVWLPDAMEG-PTPISALIHAATMVAAGVFLVARMYPVfeQFPAVMTViAWTGAItafLGASIALTQNDIKKGLAYST 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 184 IAHLGWMMsiitMNTDLMLLTLTIYIIMTTTMF---------SII-----LTSHTKSL-KDMTMMSSINPTMMILALLTL 248
Cdd:PRK07376 324 ISQLGYMV----MAMGCGAYSAGLFHLMTHAYFkamlflgsgSVIhgmeeVVGHDPVLaQDMRLMGGLRKYMPITAITFL 399
|
170 180
....*....|....*....|..
gi 52220998 249 I---SLGGLPPLSGFAPKWLIL 267
Cdd:PRK07376 400 IgclAISGIPPFAGFWSKDEIL 421
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
28-272 |
1.47e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.46 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 28 LAWmglELNTLAILPLLATSHTPRAIEATTKYFLIQAAASSMLLFASILNANLTG--QWDITQLTTQPAITMLTL----- 100
Cdd:PRK02546 142 LAW---ELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYGDtpTFDMTALAAKDFGLGFQLlcyag 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 101 ---ALMMKLGLAPMHAWLPEVM--QGTPTQM--AFI---MATWQKLAPSALLLQTAHTLHTPTILSLALLSTLIGGWGGL 170
Cdd:PRK02546 219 lliAYGVKLPIVPLHTWLPDAHgeATAPVHMllAGIllkMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSF 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 171 NQTQLRKLLAFSSIAHLGWMMSIITMNTDL-----MLLTLTIYIIMTTTMFSIILT---SHTKSLKDmtmMSSINPTM-M 241
Cdd:PRK02546 299 AQRNLKRKIAYSSISHMGFVLIGIGSFTDLgtsgaMLQMISHGLIGASLFFLVGATydrTHTLMLDE---MGGVGQKMrK 375
|
250 260 270
....*....|....*....|....*....|...
gi 52220998 242 ILALLTLISLG--GLPPLSGFAPKWLILTELTT 272
Cdd:PRK02546 376 MFAMWTACSLAslALPGMSGFVAELMVFVGFAT 408
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
60-267 |
1.73e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.08 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 60 FLIQAAASSMLLFASILNANLTGQ---WDITQLTTQ--PAITMLTLALMMKLG------LAPMHAWLPEV-MQGTPTQMA 127
Cdd:PRK07363 162 FLIYTAVSGLLVLAAFLGIVWLSGstsFDYDAISTQnlSLNTQLILLTGLLLGfgikipLVPLHTWLPDAyTEASPAVAI 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 128 FIMATWQKLAPSAL------LLQTAHTLHTPTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDLM 201
Cdd:PRK07363 242 LLGGVLAKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLS 321
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 52220998 202 LLTLTIYIIMTTTMFSIIL--------TSHTKSLKDMT-MMSSINPTMMILALLTL--ISLGGLPPLSGFAPKWLIL 267
Cdd:PRK07363 322 LLGAVAQMISHGLILALLFhlvgiverKVGTRDLDVLNgLMNPIRGLPLTSALLVLagMASAGIPGLVGFVAEFIVF 398
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
49-200 |
1.87e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 39.88 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 49 TPRAIEATTKYFLIQAAASSMLLFASILNANLTGQWDITQLTTQPAI-TMLTL-ALMMKLGLAPMHAWLPEVM-QGTPTQ 125
Cdd:PRK12668 138 TKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTaAWLILiGFGVNAAFPPLHAWLPDAYpEATVTG 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 52220998 126 MAFIMATWQKLAPSALLLQTAHTLhtpTILSLALLSTLIGGWGGLNQTQLRKLLAFSSIAHLGWMMSIITMNTDL 200
Cdd:PRK12668 218 SVFLSAFTTKTAVYALARAFPGTE---LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTAL 289
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-188 |
6.02e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.49 E-value: 6.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52220998 100 LALMMKLGLAPMHAWLPEVMQGTPTQMAFIMA-TWQKLAP------SALLLQTAHTLHTPTILSLALLSTLIGGWGGLNQ 172
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAgVLLKLGGygfirfSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQ 293
|
90
....*....|....*.
gi 52220998 173 TQLRKLLAFSSIAHLG 188
Cdd:MTH00217 294 VDLKRIIAYSSVAHMG 309
|
|
| |
