NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|52221001|ref|YP_086858|]
View 

ATP synthase F0 subunit 8 (mitochondrion) [Diplometopon zarudnyi]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009574)

ATP synthase F0 subunit 8 is a component of the mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) that produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-53 6.95e-09

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 214426  Cd Length: 54  Bit Score: 45.65  E-value: 6.95e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 52221001   1 MPQLNPAPWLMLLMLTWTTLIL-YMTKTSYFTFHMYPTSQPIMKTKIYWTWPWP 53
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILiIQPKILSFTPTNNPTKTNTTTNTTPWTWPWT 54
 
Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-53 6.95e-09

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 45.65  E-value: 6.95e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 52221001   1 MPQLNPAPWLMLLMLTWTTLIL-YMTKTSYFTFHMYPTSQPIMKTKIYWTWPWP 53
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILiIQPKILSFTPTNNPTKTNTTTNTTPWTWPWT 54
 
Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-53 6.95e-09

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 45.65  E-value: 6.95e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 52221001   1 MPQLNPAPWLMLLMLTWTTLIL-YMTKTSYFTFHMYPTSQPIMKTKIYWTWPWP 53
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILiIQPKILSFTPTNNPTKTNTTTNTTPWTWPWT 54
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-52 2.64e-07

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 41.78  E-value: 2.64e-07
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 52221001   1 MPQLNPAPWLMLLMLTWTT-LILYMTKTSYFTFHMYPTSQPIMKTKI-YWTWPW 52
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVfLTIIPPKVLAHTFPNEPTPQSTEKPKTePWNWPW 54
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-53 4.48e-06

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 38.80  E-value: 4.48e-06
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 52221001   1 MPQLNPAPWLMLLMLTWTT-LILYMTKTSYFTFHMYPTSQPIMKTKIYWTWPWP 53
Cdd:MTH00072  1 MPQLNPGPWFAIFLMSWLIfLLILPFKISNHKNLNEPTSQNKKNKPESWNWPWT 54
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-52 3.11e-03

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 31.56  E-value: 3.11e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 52221001   1 MPQLNPAPWLMLLMLTWTTLILYMTKTSYFT-FHMYPTSQPIMKTKIY-WTWPW 52
Cdd:MTH00171  1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHiFTNKPSPNQTEKPKPNeWNWPW 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH