|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
2-591 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 1029.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 2 NLLLNSSAMLTIIILTLPLLHNAIFPNKTHDFPLHCKNMITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLSF 81
Cdd:MTH00108 1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 82 KFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHA 161
Cdd:MTH00108 81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 162 RSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTDM--STLALLGLIIAATGKSAQFSLHPWLPSAMEGP 239
Cdd:MTH00108 161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPnnSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 240 TPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLN 319
Cdd:MTH00108 241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 320 QPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMN 399
Cdd:MTH00108 321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 400 TSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSSMVPL 479
Cdd:MTH00108 401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 480 TMPAIAKFSALLVSLLGLLMAMELNYMTTSLPVLSTMNLHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLIDLNWYEK 559
Cdd:MTH00108 481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
|
570 580 590
....*....|....*....|....*....|..
gi 56548702 560 TGPQGLASTHSTISSYITaTQKGLLKTYFLSF 591
Cdd:MTH00108 561 ILPKTISLIQMKASTTIS-NQKGLIKLYFLSF 591
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-591 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 926.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 1 MNLLLNSSAMLTIIILTLPLLhNAIFPN-KTHDFPL-HCKNMITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLN 78
Cdd:MTH00137 3 TTLIMTSSLILIFALLIYPLL-TTLSPNpQKPNWALtHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDIN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 79 LSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGW 158
Cdd:MTH00137 82 ISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGW 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 159 WHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMT----DMsTLALLGLIIAATGKSAQFSLHPWLPS 234
Cdd:MTH00137 162 WYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALskdfDL-TLPLLGLILAATGKSAQFGLHPWLPS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 235 AMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMV 314
Cdd:MTH00137 241 AMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 315 TIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSI 394
Cdd:MTH00137 321 TIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 395 IEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPS 474
Cdd:MTH00137 401 IEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 475 SMVPLTMPAIAKFSALLVSLLGLLMAMELNYMTTS-LPVLSTMNLHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLID 553
Cdd:MTH00137 481 KTPVMTMPPLLKLAALIVTILGLLIALELASLTNKqFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVD 560
|
570 580 590
....*....|....*....|....*....|....*...
gi 56548702 554 LNWYEKTGPQGLASTHSTISSYITATQKGLLKTYFLSF 591
Cdd:MTH00137 561 QTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTLF 598
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-591 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 880.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 1 MNLLLNSSAMLTIIILTLPLLHNAIFPNKTHdFPLHCKNMITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLS 80
Cdd:MTH00004 1 MTLLLNTTTLLTLLILLTPILLPLLSKNLKN-SPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 81 FKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWH 160
Cdd:MTH00004 80 FKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 161 ARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFM-TDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGP 239
Cdd:MTH00004 160 GRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSpTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGP 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 240 TPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLN 319
Cdd:MTH00004 240 TPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLN 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 320 QPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMN 399
Cdd:MTH00004 320 QPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLN 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 400 TSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSSMVPL 479
Cdd:MTH00004 400 TSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPM 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 480 TMPAIAKFSALLVSLLGLLMAMELNYMTTSLPVLSTMNLHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLIDLNWYEK 559
Cdd:MTH00004 480 TMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEK 559
|
570 580 590
....*....|....*....|....*....|..
gi 56548702 560 TGPQGLASTHSTISSYITATQKGLLKTYFLSF 591
Cdd:MTH00004 560 MGPKGLANLQLTASKTLTTLQKGLIKNYLTSF 591
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-591 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 858.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 1 MNLLLNSSAMLTIIILTLPLLhnaifPNKTHDFPLHCKNMITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLS 80
Cdd:MTH00066 3 LMLIFNSSMILSLLLLILPLL-----LPKSNNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 81 FKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWH 160
Cdd:MTH00066 78 FKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWH 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 161 ARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMT-DMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGP 239
Cdd:MTH00066 158 ARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLnDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 240 TPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLN 319
Cdd:MTH00066 238 TPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLN 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 320 QPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMN 399
Cdd:MTH00066 318 QPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMN 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 400 TSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSSMVPL 479
Cdd:MTH00066 398 TSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQIL 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 480 TMPAIAKFSALLVSLLGLLMAMELNYMTTSLPvlSTMNLHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLIDLNWYEK 559
Cdd:MTH00066 478 TMPTFMKLAALLVTLLGLLIALDLAKITSKTT--PKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEK 555
|
570 580 590
....*....|....*....|....*....|..
gi 56548702 560 TGPQGLASTHSTISSYITATQKGLLKTYFLSF 591
Cdd:MTH00066 556 SGPKGLTNQQLPPIKTITNIQTGLIKTYLTLF 587
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-592 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 694.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 1 MNLLLNSSAMLTIIILTLPLLhnaifpNKTHDFPLHCKNMITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLS 80
Cdd:MTH00211 1 MNTIFNSGFLLILILLLLPLL------LPLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 81 FKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWH 160
Cdd:MTH00211 75 FKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 161 ARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIF-MTDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGP 239
Cdd:MTH00211 155 GRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFiLNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 240 TPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLN 319
Cdd:MTH00211 235 TPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 320 QPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMN 399
Cdd:MTH00211 315 QPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMN 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 400 TSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSSMVPL 479
Cdd:MTH00211 395 GSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIL 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 480 TMPAIAKFSALLVSLLGLLMAMELNYMTTSlpvLSTMNLHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLIDLNWYEK 559
Cdd:MTH00211 475 SLPFLLKLMPLLVTIVGLLLGLELVNLTHK---QLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEK 551
|
570 580 590
....*....|....*....|....*....|...
gi 56548702 560 TGPQGLASTHSTISSYITATQKGLLKTYFLSFV 592
Cdd:MTH00211 552 LGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLL 584
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
42-591 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 591.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 42 TLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKY 121
Cdd:MTH00208 64 TLAFLSLINLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 122 LTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQ 201
Cdd:MTH00208 144 LIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 202 IFM-----TDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSIT 276
Cdd:MTH00208 224 ILSlnnsnSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLC 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 277 LCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIR 356
Cdd:MTH00208 304 LILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLR 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 357 KMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPRS 436
Cdd:MTH00208 384 KMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSF 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 437 LPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSsmVPLTMPAIAKFSALLVSLLGLLMAMELNYMTTSLPVLStm 516
Cdd:MTH00208 464 SPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNL--PPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINS-- 539
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 56548702 517 NLHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLIDLNWYEKTGPQGLASTHSTISSYITATQKGLLKTYFLSF 591
Cdd:MTH00208 540 NFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSS 614
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
40-467 |
8.23e-139 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 416.86 E-value: 8.23e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 40 MITLAFTMSLTTLMTFIltGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFF 119
Cdd:COG1009 37 APLAAFVLSLLLFPAVL--GGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 120 KYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDL 199
Cdd:COG1009 115 AYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 200 QQIFM-------TDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTI 272
Cdd:COG1009 195 SELLAaaptilsSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVW 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 273 LSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNdE 352
Cdd:COG1009 275 LTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-T 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 353 QDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATS-LTAVYSLRIIYFALL 431
Cdd:COG1009 354 RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFF 433
|
410 420 430
....*....|....*....|....*....|....*.
gi 56548702 432 NQPRSLPLSPLNENNPHLINSITRLALGSIFAGFIL 467
Cdd:COG1009 434 GKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLL 469
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
40-468 |
4.54e-131 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 397.61 E-value: 4.54e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 40 MITLAFTMSLTTLMTFILTGQET-TITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRF 118
Cdd:PRK06590 38 LVGLSALLSLVVFFDFLLGGGRAfSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 119 FKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWD 198
Cdd:PRK06590 118 FAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLN 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 199 LQQIFM-------TDMSTLALLG--LIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTN 269
Cdd:PRK06590 198 YDEVFAaapqffgLGWSALTLICllLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELS 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 270 STILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSL 349
Cdd:PRK06590 278 PEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 350 NDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYtNSWALTTTLIATSLTAVYSLRIIYFA 429
Cdd:PRK06590 358 HHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLV 436
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 56548702 430 LLNQPRSLP----LSPLNENNPHLInsitrLALGSIFAGFILT 468
Cdd:PRK06590 437 FHGKEKEKIhhphESPAVMTLPLIV-----LAVLSVFAGALIV 474
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
41-473 |
5.64e-126 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 383.94 E-value: 5.64e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 41 ITLAFTMSLTTLMTFILTGQETTITN--WQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRF 118
Cdd:TIGR01974 37 VGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRF 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 119 FKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWD 198
Cdd:TIGR01974 117 FAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLN 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 199 LQQIFMT------DMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTI 272
Cdd:TIGR01974 197 FQEVFALapgaffSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 273 LSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDE 352
Cdd:TIGR01974 277 LYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHE 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 353 QDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLN 432
Cdd:TIGR01974 357 QDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG 436
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 56548702 433 QPRSLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISP 473
Cdd:TIGR01974 437 KERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEF 477
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
43-591 |
4.45e-120 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 368.64 E-value: 4.45e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 43 LAFTMSLTTLMTF--ILTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFK 120
Cdd:MTH00020 36 LIISLSWSFLIFYeiLFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMS 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 121 YLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQ 200
Cdd:MTH00020 116 YLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 201 QIF-MTDMS-----TLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILS 274
Cdd:MTH00020 196 SVFnMVVSApssdiTLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 275 ITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQD 354
Cdd:MTH00020 276 IVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQD 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 355 IRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQP 434
Cdd:MTH00020 356 MRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNT 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 435 RSLP--LSPLNENNPHLINSITRLALGSIFAGF-----ILTMNISPSSMVPLTMPAIAKFSALLVSLLGLLMAMELNYMT 507
Cdd:MTH00020 436 NLKKavFFHLHEGDWNLLLPLGILALGSIFVGYlakemIWSFQITLPPIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTF 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 508 TSLPVLSTMNLHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLIDLNWYEKTGPQGLASTHSTISSYITATQKGLLKTY 587
Cdd:MTH00020 516 RVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNY 595
|
....
gi 56548702 588 FLSF 591
Cdd:MTH00020 596 ALVI 599
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
41-486 |
1.36e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 352.00 E-value: 1.36e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 41 ITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFK 120
Cdd:MTH00210 36 IVISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMS 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 121 YLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQ 200
Cdd:MTH00210 116 YLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 201 QIFM-------TDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTIL 273
Cdd:MTH00210 196 TISSllvtninKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLAL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 274 SITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQ 353
Cdd:MTH00210 276 TIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQ 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 354 DIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQ 433
Cdd:MTH00210 356 DMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITN 435
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 56548702 434 PRSLPLSPLN--ENNPHLINSITRLALGSIFAGFiLTMNISPSSMVPLTMPAIAK 486
Cdd:MTH00210 436 TNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGY-LGKEVVLSNVIPPIVPNSIK 489
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
37-469 |
3.22e-110 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 341.82 E-value: 3.22e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 37 CKNMITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIH 116
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 117 RFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHArSDANTAALQAVLYNRIGDiGFMLSMAWLMINNNS 196
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQN-KKSLSAGMLTALTNRIGD-VLILLSIALLVLLGH 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 197 WDLqqIFMTDMSTLALLG--LIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILS 274
Cdd:MTH00151 164 WSI--LSMWDFKLSGWLGllLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 275 ITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQD 354
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 355 IRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQP 434
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430
....*....|....*....|....*....|....*
gi 56548702 435 RSLPLSPLNENNPHLINSITRLALGSIFAGFILTM 469
Cdd:MTH00151 402 KSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQS 436
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
40-592 |
5.78e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 338.65 E-value: 5.78e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 40 MITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFF 119
Cdd:MTH00165 9 FFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 120 KYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHaRSDANTAALQAVLYNRIGDIGFMLSMAWlMINNNSWD- 198
Cdd:MTH00165 89 YLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQ-NKKSYNAGMLTALSNRIGDVAILLSIAW-MMNFGSWNf 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 199 ---LQQIFMTDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQtNSTILSI 275
Cdd:MTH00165 167 ifyLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLF-SSFFSKF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 276 TLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDI 355
Cdd:MTH00165 246 LLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDI 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 356 RKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPR 435
Cdd:MTH00165 326 RFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFN 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 436 SLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSSMVPLtMPAIAKFSALLVSLLGLLMAMELNYMTTSLPVLSt 515
Cdd:MTH00165 406 LKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMIC-LPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKS- 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 516 MNLHNFSNMLGH---------FTLIFHRLNPLASLHagrqtatMLIDLNWYEKTGPQGLASTHSTISSYITATQKGLLKT 586
Cdd:MTH00165 484 LKNYKLSSFLGSmwfmpflstYGISYYPLNLGSLSL-------KSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKI 556
|
....*.
gi 56548702 587 YFLSFV 592
Cdd:MTH00165 557 YLLSFL 562
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
40-592 |
4.43e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 315.55 E-value: 4.43e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 40 MITLAFTMslTTLMTFILTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFF 119
Cdd:MTH00207 14 LWFMSILM--FPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 120 KYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFML-IGWWHARSDAntAALQAVLYNRIGDIGFMLSMAWlMINNNSWD 198
Cdd:MTH00207 92 SLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILvIYYQNPKSLG--AGMITALTNRIGDVMLLLSIGW-TLNQGHWS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 199 LQQIFMTDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLC 278
Cdd:MTH00207 169 ITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 279 LGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKM 358
Cdd:MTH00207 249 TASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTM 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 359 GGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPRSLP 438
Cdd:MTH00207 329 GNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSP 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 439 LSPLNENNPHLINSITRLALGSIFAGFILTMNIsPSSMVPLTMPAIAKFSALLVSLLGLLMAME-LNYMTTSLPVLSTMN 517
Cdd:MTH00207 409 YHHLEDEDKSLTTPMLLLTLGAITSGSALNWWL-PTPQEEPILPLQYKLLPLLVVTLGALLAWLfTTPNITKTPLLINNP 487
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 56548702 518 LHNFSNMLGHFTLIFHRLNPLASLHAGRQTATMLIDLNWYEKTGPQGLASTHSTISSYITATQKGLLKTY-FLSFV 592
Cdd:MTH00207 488 LSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYlMMSFV 563
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
38-592 |
5.05e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 315.05 E-value: 5.05e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 38 KNMITLAFTMSLTTLMTFI--LTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNI 115
Cdd:MTH00209 3 KMQMFSLMLLFLFSFLMFVifMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 116 HRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHaRSDANTAALQAVLYNRIGDIGFMLSMAWLMINNN 195
Cdd:MTH00209 83 KRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQ-NSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 196 SWDLQQIFMTDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSI 275
Cdd:MTH00209 162 WNIFYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 276 TLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDI 355
Cdd:MTH00209 242 LLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDI 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 356 RKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPR 435
Cdd:MTH00209 322 RMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 436 SLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSSMVPlTMPAIAKFsALLVSLLGLLMAMELNYMTTSLPVLST 515
Cdd:MTH00209 402 SKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSV-VLPWFLKL-LPIMLILFGVLLMYMVLKKNFFLIKGY 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 516 MNLHNFSNMLghftlifhRLNPLASLHAGR------QTATMLIDLNWYEKTGPQGLASTHSTISSYITATQKGLLKTYFL 589
Cdd:MTH00209 480 KVNYFLSQMW--------FLPDLSSQPVNKftmklsKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVT 551
|
...
gi 56548702 590 SFV 592
Cdd:MTH00209 552 FMM 554
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
47-592 |
1.91e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 301.11 E-value: 1.91e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 47 MSLTTLMTFILTGQ------ETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFK 120
Cdd:MTH00032 36 MGSSTLIALFLAYEvlindaVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLC 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 121 YLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLM--------- 191
Cdd:MTH00032 116 YLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYktigsldfl 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 192 ----------INNNSWDLQQIFMTDMSTLALLG--LIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLL 259
Cdd:MTH00032 196 tfnggsvgsgIMDRGYYGGGAYESPLAPFAIIGilLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLM 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 260 IRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPH-LAFLHICTHAFFKAML 338
Cdd:MTH00032 276 IRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALL 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 339 FLCSGSIIHSLN-DEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIE--------------------- 396
Cdd:MTH00032 356 FLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqg 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 397 ---------------AMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQP----RSLPLSPLNENNPHLINSITRLA 457
Cdd:MTH00032 436 digikkddrgsiggpEGYPSRGSAFAFWLGTVAALLTAFYSIRLVYITFIISPnspkESLISSHINIVDKRVLTVLSLLC 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 458 LGSIFAGF----ILTMNISPSSMVPL--TMPAIAKFSALLVSLLGLLMAMELNYMTTSLPVLSTMNLHNFSNMLG--HFT 529
Cdd:MTH00032 516 FGAIFVGYliqdILIGDIEHPIVPPLikVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGawQGD 595
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 56548702 530 LIFHRLNPLASLHAGRQTATMLIDLNWYEKTGPQGLASTHSTISSYITATQKGLLKTYFLSFV 592
Cdd:MTH00032 596 HLINKLVAIPLFSFGHWGIYKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLL 658
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
44-428 |
6.46e-88 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 286.53 E-value: 6.46e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 44 AFTMSLTTLMTFIlTGQETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLT 123
Cdd:PRK07376 51 AAVLSYALLWSQI-QGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 124 LFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQI- 202
Cdd:PRK07376 130 LFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIa 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 203 --FMTDMST------LALLGLIIAATG---KSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNST 271
Cdd:PRK07376 210 drLSELVSSgavsgwLALLLCILVFLGpmaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 272 ILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLND 351
Cdd:PRK07376 290 VMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEE 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 352 --------EQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALttTLIATSLTAVYSL 423
Cdd:PRK07376 370 vvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWFV--GFLTAGMTAFYMF 447
|
....*
gi 56548702 424 RiIYF 428
Cdd:PRK07376 448 R-MYF 451
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-428 |
5.48e-69 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 237.48 E-value: 5.48e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 67 WQWLSINTFtlnlSFKFDYF-----SIIFIPIALyVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQL 141
Cdd:CHL00025 73 WSWTINNDF----SLEFGYLidpltSIMLILITT-VGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 142 FIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMA---WL---------------MINNNSWDLqqIF 203
Cdd:CHL00025 148 YIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILgfyWItgsfefrdlfeifnnLIYNNEVNL--LF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 204 MTDMSTLALLGliiaATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAIT 283
Cdd:CHL00025 226 ATLCAFLLFLG----PVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIIT 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 284 TLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDI 355
Cdd:CHL00025 302 ALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNM 381
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 56548702 356 RKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIeamntsyTNSWALTTTL--IATS---LTAVYSLRiIYF 428
Cdd:CHL00025 382 VLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-------NDSWLYSPIFaiIAWStagLTAFYMFR-IYL 451
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
43-414 |
3.60e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 216.32 E-value: 3.60e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 43 LAFTMSLTTLMTFILTGQETTITnWQWlsINTFTLNLSFKFDYFSIIFipiALYVT---WSILEFSLWYMYSDPNIHRFF 119
Cdd:PRK12647 25 LALFLYFLSFIPEIAAGETVRGG-YAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDLGRFY 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 120 KYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDL 199
Cdd:PRK12647 99 SYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 200 QQIF-MTDMST------LALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTI 272
Cdd:PRK12647 179 SELLaSGDVIRehplylAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLW 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 273 LSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHSL 349
Cdd:PRK12647 259 QTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHET 338
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 56548702 350 NdEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAmnTSYTNSWALTTTLIA 414
Cdd:PRK12647 339 G-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-441 |
2.34e-59 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 213.51 E-value: 2.34e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 10 MLTIIILTLPLLhNAIFPNKthdFPLHCKNMIT-LAFTMSLTTL-MTFILTGQ----ETTITNWQWLSinTFTLNLSFKF 83
Cdd:PRK12648 1 MSLLLLVLLPFL-GALLAAL---LPRNARNAEAwLAGLVALAALvLLALLYPAvaagEVIRAEIEWLP--ALGLNLSLRL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 84 DYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARS 163
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 164 DANTAALQAVLYNRIGdiGFMLSMAWLMINN--NSWDLQQIFMT-------DMSTLALLGLIIAATGKSAQFSLHPWLPS 234
Cdd:PRK12648 155 DARRGARMALTVTGAG--GLALLAGVLLLGHivGSYDLDVVLAAgdlirahPLYPPALVLILLGAFTKSAQFPFHFWLPH 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 235 AMEGPTPVSALLHSSTMVVAGIFLLIRFHP-MIQTNSTILSITLClGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMM 313
Cdd:PRK12648 233 AMAAPTPVSAYLHSATMVKAGVFLLARLWPvLAGTEEWFWIVGGA-GLITLLLGAYFALFQHDLKGLLAYSTISHLGLIT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 314 VTIGLNQPhLAFL----HICTHAFFKAMLFLCSGSIIHslndE---QDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLA 386
Cdd:PRK12648 312 LLLGLGSP-LAAVaaifHIINHATFKASLFMAAGIIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLN 386
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 387 GFYSKDSII-EAMNTSYTNSWALTTTLIAT---SLTAVYSLRIIYFALLNQPRS-LPLSP 441
Cdd:PRK12648 387 GFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIHDVFFGPPPDdLPKTP 446
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
77-467 |
5.67e-56 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 204.12 E-value: 5.67e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 77 LNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLI 156
Cdd:PRK12650 71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 157 gwwhARS--DANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTD--------MSTLALLgLIIAATGKSAQF 226
Cdd:PRK12650 151 ----ARSgsGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDvwaekpglTTVVAVL-IAVAAFTKSAQF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 227 SLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNST--ILSITlcLGAITTLFTAICAITQNDIKKIVAFS 304
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVwnWLLII--VGMITALMGAVFAVQKTDLKKLTAYS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 305 TSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHSLPITSSCLMTGSLALMG 381
Cdd:PRK12650 304 TVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAALSMAA 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 382 TPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAV----YSLRIIYFALLNQPRslPLSPLNENNPHLINSITRLA 457
Cdd:PRK12650 383 VPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR--DMSHVKEAPVSLWLPAALPG 460
|
410
....*....|
gi 56548702 458 LGSIFAGFIL 467
Cdd:PRK12650 461 ALSLPLGLVP 470
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
77-432 |
4.67e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 195.14 E-value: 4.67e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 77 LNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLI 156
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 157 GWWHaRSDANTAALQAVLYNRIGDIgFMLSMAWLMINNNSWDLQQIFMTDMSTLALLgliIAATGKSAQFSLHPWLPSAM 236
Cdd:MTH00095 117 LFYN-NWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFFSSSMILMLL---LTSFTKSAQFPFSSWLPKAM 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 237 EGPTPVSALLHSSTMVVAGIFLLIRFHPMIQtNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTI 316
Cdd:MTH00095 192 SAPTPVSSLVHSSTLVTAGLILLMNFSYLIL-NMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTF 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 317 GLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGlLHSLPITSSCLMTGSL-ALMGTPFLAGFYSKDSII 395
Cdd:MTH00095 271 GSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSN-NGNLPMFIQLQLLVTLfCLCGLMFTSGMVSKELIL 349
|
330 340 350
....*....|....*....|....*....|....*..
gi 56548702 396 EAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFALLN 432
Cdd:MTH00095 350 ELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
75-435 |
1.65e-54 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 198.15 E-value: 1.65e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 75 FTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFM 154
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 155 LIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTDMSTL-------ALLGLIIAATGKSAQFS 227
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRnsplfgtAMVLVLLGAFTKSAQFP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 228 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSS 307
Cdd:TIGR00940 225 FHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTIS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 308 QLGLMMVTIGLNQPHL----------------AFLHICTHAFFKAMLFLCSGSIIHSlNDEQDIRKMGGLLHSLPITSSC 371
Cdd:TIGR00940 305 QLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTL 383
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 56548702 372 LMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTL---------IATSLTAVYSLRIIYFALLNQPR 435
Cdd:TIGR00940 384 AMIASAAMAGVPPFNGFLSKEMFFAEAITAHLVNPFDTVTLgylfpyvatVASVFTFVYSLRFIHGVFFGRPK 456
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
59-465 |
1.74e-54 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 199.77 E-value: 1.74e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 59 GQETTITNWqwlsINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSD-PNIHRFFKYLTLFLLTMIILVSANN 137
Cdd:PRK12644 52 GAPTEVVPW----IPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDN 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 138 LFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFM----TDMSTLALL 213
Cdd:PRK12644 128 LLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLAdpptGPAVSVAVV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 214 GLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAIT 293
Cdd:PRK12644 208 LILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALR 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 294 QNDIKKIVAFSTSSQLGLMMVTIGLNQPH--LAFLH-ICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHSLPITS- 369
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDaaLAGLAmLLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAv 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 370 -SCLMTGSLAlmGTPFLAGFYSKDSIIEAMNTSYTNS----WALTTTLIATSLTAVYSLRIIYFALLNQPR---SLPLSP 441
Cdd:PRK12644 367 vAALAAASMA--GLPPLLGFVAKEAALEAVLHDGALGpagpVVLAGIVLGSILTVAYSLRFLWGAFARKPGafpSVAVTE 444
|
410 420
....*....|....*....|....
gi 56548702 442 LNENNPHLINSITRLALGSIFAGF 465
Cdd:PRK12644 445 MHRPSPLFLAPPAVLAVLGLVLGL 468
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
135-397 |
4.32e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 183.28 E-value: 4.32e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 135 ANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTD-------M 207
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALtgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 208 STLALLGLIIAATGKSAQFSLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPMIQTNS-TILSITLCLGAITTL 285
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 286 FTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLL 362
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*
gi 56548702 363 HSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEA 397
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAA 274
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
72-426 |
8.97e-52 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 190.74 E-value: 8.97e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 72 INTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSD-PNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGI 150
Cdd:PRK12646 65 MKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 151 MSFMLIGWWHARSDANTAALQAVLYNRIGD----IGFMLSMAWLMINNNSWDLQQIFMTDMSTL---ALLGLIIAATGKS 223
Cdd:PRK12646 145 SSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHGLfipMIFMFLLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 224 AQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAF 303
Cdd:PRK12646 225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 304 STSSQLGLMMVTIGLN-----QPHLAF------------LHICTHAFFKAMLFLCSGSIIHSlNDEQDIRKMGGLLHSLP 366
Cdd:PRK12646 305 STISQLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFP 383
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 56548702 367 ITSSCLMTGSLALMGTPFLAGFYSKDSIIEAM-NTSYTNSWALTTT-------LIATSLTAVYSLRII 426
Cdd:PRK12646 384 KMNLVMTIAALSMAGVPFLNGFLSKEMFLDALtQTGQLSQFSLISMiiivfigVIASIFTFTYALYMV 451
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
80-429 |
3.32e-50 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 179.57 E-value: 3.32e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 80 SFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGwW 159
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-L 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 160 HARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSW---DLQQIFMTDMSTLALLGLIIAATG---KSAQFSLHPWLP 233
Cdd:COG0651 150 GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLnmaDLAARLAELDPGLLLAAFALLLVGfgiKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 234 SAM-EGPTPVSALLhSSTMVVAGIFLLIRFHPMI---QTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQL 309
Cdd:COG0651 230 DAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQI 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 310 GLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLA 386
Cdd:COG0651 309 GYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLS 387
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 56548702 387 GFYSKDSIIEAMNTSytNSWALTTTLIATS-LTAVYSLRIIYFA 429
Cdd:COG0651 388 GFVSKWLLLQAALEA--GAWLLAAVLLLSSlLTLAYFVRIFGRA 429
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
40-423 |
9.29e-50 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 182.42 E-value: 9.29e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 40 MITLAFTMSLTTLmtFILTGQETTITNWQWLsiNTFTLNLSFKFDYFSIIFIPIALYVTWSILE--FSLWYMYSDPNIHR 117
Cdd:PRK07390 46 MTLLAFVHSLLAL--RAIWNQPPQQLSFPWL--QVADLDLSLSLEISPVTLGALELITGLSLLAqiYALGYLEKDWGLAR 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 118 FFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSW 197
Cdd:PRK07390 122 FFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 198 DLQQIFM------TDMSTLALLG--LIIAATGKSAQFSLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFHPMIQTN 269
Cdd:PRK07390 202 NFSDLAAwaatanLDPLTATLLGlaLIAGPTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALS 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 270 STILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSL 349
Cdd:PRK07390 281 PVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTT 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 350 NDeQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYskdSIIEAMNTSYTNSWAL------TTTLIATSLTAVYSL 423
Cdd:PRK07390 361 IT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFW---ALLRLADGLWAVSPWLvgvlllVNALTAFNLTRVFRL 436
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
77-426 |
2.13e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 180.80 E-value: 2.13e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 77 LNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLI 156
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 157 GWWHARSDANTAALQAVLYNRIGD----IGFML------SMAWLMINNNSWDLQQIFMTDMSTLALLGLIIAATGKSAQF 226
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGlfmfAGFLLlhvitgTYDIATILQDSELIENIKGHPLFLITLILIFIGAAAKSAQG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 227 SLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTS 306
Cdd:PRK12649 232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 307 SQLGLMMVTIGLNQPH-------LAFLHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHSLPITSSCLMTGSLAL 379
Cdd:PRK12649 312 SQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAM 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 56548702 380 MGTPFLAGFYSKDSIIEA---MNTSYTNSWALTTTLIATS---LTAVYSLRII 426
Cdd:PRK12649 391 AGIPPLNGFLSKEMFYETsveMGALIGGPFTIIIPAVAVLggvFTFAYSIKLI 443
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
116-427 |
1.03e-45 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 173.19 E-value: 1.03e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 116 HRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNN 195
Cdd:PRK12645 110 GNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 196 SWDLQQIFMT-------DMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQT 268
Cdd:PRK12645 190 SFSIREMIANadeiqnsPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 269 NSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHL----------------AFLHICTHA 332
Cdd:PRK12645 270 SQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHA 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 333 FFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAM-NTSYTNSWALTT- 410
Cdd:PRK12645 350 TFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMlNATEANLFSLDTw 428
|
330 340
....*....|....*....|....
gi 56548702 411 -------TLIATSLTAVYSLRIIY 427
Cdd:PRK12645 429 gvlfpviAWVASVFTFVYSIIFIF 452
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
117-423 |
2.81e-45 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 167.07 E-value: 2.81e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 117 RFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWwHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNS 196
Cdd:PRK06525 114 RYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 197 WDLQQI--FMTDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhpmIQTNSTILS 274
Cdd:PRK06525 193 FALSALsgLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA---IQSMGPIPH 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 275 ITLCLGAITTLFTAICAIT----QNDIKKIVAFSTSSQLGLMMVTIGLN--QPHLAF----LHICTHAFFKAMLFLCSGS 344
Cdd:PRK06525 270 VIGYVGAVMAIVTLLYGFLmylpQQDMKRLLAYSTITQLGYMFFGLSLAilGSRLALegsiAYIFNHAFAKSLFFLVAGA 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 56548702 345 IIHSLNdEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSL 423
Cdd:PRK06525 350 LSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVASF 427
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
84-465 |
3.48e-38 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 147.33 E-value: 3.48e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 84 DYFSIIFIPIALYVTWsileFSLWYMY-SDPNIHRFFKYLTLFLLT--MIILVSANnLFQLFIGWEGVGIMSFMLIGWwH 160
Cdd:PRK08375 76 DSLSALFLLVTSILAI----AALLYAIgYGEHRQTRFYALFLLLLAglLGALLTAD-LFNLFVFLEIMSLSSYALVAM-G 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 161 ARSDANTAALQAVLYNRIGD------IGFMLSMAWLMinnNSWDLQQIFMTDMSTLALLGLIIAATG-KSAQFSLHPWLP 233
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGStflligVGLLYGVTGTL---NMADLAGALAENPTVVTAFGFVLLALAlKAAVFPLHTWLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 234 SAMEGPTPVSALLHSSTMVVAGIFLLIR-----FHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQ 308
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRiyftvFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 309 LGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFL 385
Cdd:PRK08375 307 MGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPT 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 386 AGFYSKDSIIEAMNtsYTNSWALTTTLIATSL-TAVYSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAG 464
Cdd:PRK08375 386 SGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLG 463
|
.
gi 56548702 465 F 465
Cdd:PRK08375 464 I 464
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
421-592 |
7.91e-37 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 135.37 E-value: 7.91e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 421 YSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAGFILTMNISPSSMVPlTMPAIAKFSALLVSLLGLLMA 500
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMM-TMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 501 MELNYMTTSLP-VLSTMNLHNFSNMLGHFTLIFHRLNPLASLHAGrQTATMLIDLNWYEKTGPQGLASTHSTISSYITAT 579
Cdd:pfam06455 80 LELSNLSNKQLkKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLG-QKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNS 158
|
170
....*....|...
gi 56548702 580 QKGLLKTYFLSFV 592
Cdd:pfam06455 159 QKGLIKIYLLSFL 171
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-436 |
6.15e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 129.71 E-value: 6.15e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 101 ILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQ--------- 171
Cdd:PRK12667 98 ILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKyaligavgt 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 172 -------AVLYNRIGdigfMLSMAWLMINNNSwdlQQIFMTDMST--------LALLGLIIAATGKSAQFSLHPWLPSAM 236
Cdd:PRK12667 178 tlyflalAFLYATFG----TLNMADLSAKIRG---LSFPLTGGLAgnpplalgVALALALWAFTIKAAIFPNHFWLPDAH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 237 -EGPTPVSALLhSSTMVVAGIFLLIRFHPMI--------QTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSS 307
Cdd:PRK12667 251 pAAPSPVSAML-SGLVVNVGAYAIIRFLYTIfgispsliDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTIS 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 308 QLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPF 384
Cdd:PRK12667 330 HMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPP 408
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 56548702 385 LAGFYSKDSIIEAMNTSYTNSWALtTTLIATSLTAVYSLRIIYFALLNQPRS 436
Cdd:PRK12667 409 LNGFFSKLLLFNALLESGFYLPAL-VLLIASAISLVGYFRAWYSLFFGKPKS 459
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
56-423 |
3.30e-31 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 128.70 E-value: 3.30e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 56 ILTGQETTITNWQWLSintfTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWY---MYSDPNIHRFFKYLTLFLLTMIIL 132
Cdd:PRK08667 52 LFTGNPLDIPLWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGV 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 133 VSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTDMS-TLA 211
Cdd:PRK08667 128 VASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIlSLV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 212 LLGLIIAATGKSAQFSLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFHPMIQTNSTILSIT-LCLGAITTLFTAI 289
Cdd:PRK08667 208 FLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWGVLiLLAGSISALLGVI 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 290 CAITQNDIKKIVAFSTSSQLGLMMVTIGL-------NQPHLAFL-------HICTHAFFKAMLFLCSGSIIHSLNDeQDI 355
Cdd:PRK08667 287 YALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGT-RNI 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 56548702 356 RKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEamntSYTNSWALTTTLIATSLTAVYSL 423
Cdd:PRK08667 366 EKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE----SFFQSFSVADPLIKILLFSVLAI 429
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
99-346 |
5.80e-31 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 126.74 E-value: 5.80e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 99 WSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRI 178
Cdd:PRK08168 83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 179 GDI--GFMLSMAWLMINNNSWD--LQQIFMTDMST---LALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTM 251
Cdd:PRK08168 163 AELllLAAAALAYLEVGSLSLSalWAHLAAQGASPslqAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 252 VVAGiFLLIRFHPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTH 331
Cdd:PRK08168 243 NLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAH 321
|
250
....*....|....*
gi 56548702 332 AFFKAMLFLCSGSII 346
Cdd:PRK08168 322 SLYKAHAFLSASEAV 336
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
10-424 |
6.66e-30 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 123.27 E-value: 6.66e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 10 MLTIIILtLPLLHNAI---FPNKTHDFPLhcknMITLAFTMSLTTLMTFILTGQETTITNWQWLS----INTFTLNLSFK 82
Cdd:COG1008 5 LLSLLIL-LPLLGALLlllLPRRNARLAR----WVALAVSLLTLLLSLYLLAGFDPGTGGFQFVEsypwIPSLGISYHLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 83 FDYFSIIFIPIALYVTWSILefslwyMYSDPNIHRFFK-YLTLFLLT---MIILVSANNLFQLFIGWEGVGIMSFMLIGW 158
Cdd:COG1008 80 VDGISLPLVLLTALLTPLAI------LASWNEIKKRPKlYYALLLLLeagMIGVFLALDLFLFYVFWELMLIPMYFLIGI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 159 WhARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSW--DLQQIFMTDMS----TLALLGLIIAATGKSAQFSLHPWL 232
Cdd:COG1008 154 W-GGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPltaqLLLFLAFFIAFAVKVPMFPFHTWL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 233 PSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPMI-----QTNSTILSItlcLGAITTLFTAICAITQNDIKKIVAFSTS 306
Cdd:COG1008 233 PDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFALPLfpeasAYFAPLLAA---LGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 307 SQLGLMMVTIG-LNQPHL--AFLHICTHAFFKAMLFLCSGSIIHSLNDeQDIRKMGGLLHSLPITSSCLMTGSLALMGTP 383
Cdd:COG1008 309 SHMGFVLLGIFaLNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 56548702 384 FLAGFYSKDSIIEAmntSYTNSWALttTLIATS---LTAVYSLR 424
Cdd:COG1008 388 GTSGFVGEFLVLLG---AFQVNPWL--AILAALgliLTAAYLLW 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
68-477 |
2.36e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 118.77 E-value: 2.36e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 68 QWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYM---YSDPNIHRFFKYLTLFLLTMIILVSANnLFQLFIG 144
Cdd:PRK06589 66 QFELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLainNIDSSSRFLFFFNLTILIGVLIALSSD-LFTMFVC 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 145 WEGVGIMSFMLIGwwHARSDANTAALQ---AVLYNRiGDIGFMLSMAWLMINNNSWDLQQ--IFMTDMStLALLGLIIAA 219
Cdd:PRK06589 145 YELLTISTAFLIG--HTRNNISLSGGYkylKILMIS-ALLLFLPAVILIYTKTGNLDFVSggLFSKNQS-IILLLMFIYG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 220 TGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSIT-----LCLGAITTLFTA-ICAIT 293
Cdd:PRK06589 221 IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALK 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 294 QNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIhSLNDEQDIRKMGGLLHSLPITSS 370
Cdd:PRK06589 301 TDNIKKILAYSTISQLSLALLSAFILTPkalGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISF 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 371 CLMTGSLALMGTPFLAGFYSKDSIIEAM--NTSYTNSWALTTTLIATS-LTAVYSLRIIYFALlnQPRSLPLSPLNENNP 447
Cdd:PRK06589 380 IISISSLSLIGIPIFSGFISKFLILLAAseQNQPWLSIIVMLVVIASSiLSALYLLKILSSIY--KPSLSENSFITKSLP 457
|
410 420 430
....*....|....*....|....*....|
gi 56548702 448 HLINSITRLALGSIFAGFILTMNISPSSMV 477
Cdd:PRK06589 458 YLMQISVITCCCALTLFYFIQILIREFLAY 487
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
117-429 |
1.42e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 116.20 E-value: 1.42e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 117 RFFKYLTLFLLTMIILV-SANNLFQLFIGWEGVGIMSFMLIGwwHARSD-ANTAALQAVLYNRIGDIGFMLSMAWLMINN 194
Cdd:PRK07234 94 RFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQAN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 195 NSWDLQQIFMTDMSTLALLGLIIAAtgKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILS 274
Cdd:PRK07234 172 GTFAFSGLATADPEAFALIALGLLV--KGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVR 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 275 ItlcLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVT--IGlnqphlAFLHIcTHAFFKAMLFLCSGsIIHSLNDE 352
Cdd:PRK07234 250 I---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAplVG------GLYAL-AHGLVKSTLFLCAG-ALPSRNFT 318
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 56548702 353 QDIRKMGGLLHSLPITssclmTGSLALMGTPFLAGFYSKdsiieAMNTSYTNSWALTTTLIATSLTAVYSLRIIYFA 429
Cdd:PRK07234 319 ELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSK-----VLTLKNLLPWQAIALNLAAVGTAASFWKFIFLP 385
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
124-391 |
2.27e-27 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 117.30 E-value: 2.27e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 124 LFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIF 203
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 204 MTDMS----TLALLGLIIAATGKSAQFSLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRF-----HPMIQTNSTIL 273
Cdd:PRK06521 201 AAHLSpfwaSLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVvfdllGAPGWWWGVLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 274 sitLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGL-------NQPHLAFL-------HICTHAFFKAMLF 339
Cdd:PRK06521 280 ---LALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSLLF 356
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 56548702 340 LCSGSIIHSLNdEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSK 391
Cdd:PRK06521 357 LGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
74-434 |
3.25e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 115.58 E-value: 3.25e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 74 TFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSF 153
Cdd:PRK08376 79 GFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASY 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 154 MLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQI--------FMTDMSTLALLglIIAATGKSAQ 225
Cdd:PRK08376 159 ALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLavkmsenpTVVAKIALALF--IAGLAMKSGA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 226 FSLHPWLPSAM-EGPTPVSALLHSSTmvVAGIFLLIR-----FHPMIQTNsTILSITLCLGAITTLFTAICAITQNDIKK 299
Cdd:PRK08376 237 VPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvlfsiYGPAINLA-TVGWVIIILGCLTMFVGVAMAVVQKDVKR 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 300 IVAFSTSSQLGLMMVTIG-----LNQPHL----------AFLHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHS 364
Cdd:PRK08376 314 LLAYHSVSQIGYMLLGLGvglaaLGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLART 392
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 56548702 365 LPITSSCLMTGSLALMGTPFLAGFYSKDSIIEamnTSYTNSWALTT-TLIATSLTAVYSLRIIYFALLNQP 434
Cdd:PRK08376 393 MPKTTIAFLIGAAAIVGLPPFNGFASKWLIYE---SSALFNPILGViAMIGSVLTLASFVKVFHTAFFGPP 460
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
86-427 |
4.17e-26 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 112.17 E-value: 4.17e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 86 FSIIFIPIALYVTWSILEFSLWYMYSDPNIhrffKYLTLFLLTMII---LVSANNLFQLFIGWEGVGIMSFMLIGWwHAR 162
Cdd:PRK08377 79 FAALFVLIIAIVSFIMSIFSLKAVEVEPID----KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY-NKT 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 163 SDANTAALQAVLYNRIGDIGFMLSMAWL---MINNNSWDLQQIFMTDMSTLALLGLIIAATG---KSAQFSLHPWLPSAM 236
Cdd:PRK08377 154 GEAAEASMKYIVLGGIGSSFFLIGVALIygaTGTLNMAHIAQLAGTIDPTVAQVGLALLIFGlavEAELFPLNAWAPDAY 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 237 EG-PTPVSALLhSSTMVVAGIFLLIRFHPMIQTN---STILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLM 312
Cdd:PRK08377 234 QAaPHPITVMF-SAFVVKAGLYAMARILYLMQNAngwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 313 MVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQdIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFY 389
Cdd:PRK08377 313 ALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFW 391
|
330 340 350
....*....|....*....|....*....|....*....
gi 56548702 390 SKDSIIEA-MNTSYTnsWALTTTLIATSLTAVYSLRIIY 427
Cdd:PRK08377 392 SKFRIILAgLSAGYT--WPVALVLGASVVEAVYYFRLIH 428
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
67-424 |
4.30e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 112.28 E-value: 4.30e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 67 WQWLSINTFTLNLSFKFDYFSIIFIPIALY---VTWSILE-----FSLWYMYSDpniHRF---------FKYLTLFLLTM 129
Cdd:MTH00063 13 IFFLFLVGVSSSVSLNFLSFGGYSWLINFDfdyVTFGVLLmllicFYYSLLYTF---HYFggsyasfllNKLIVLFVLVM 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 130 IILVSANNLFQLFIGWEGVGIMSFMLIgWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWdlqqifmtdmST 209
Cdd:MTH00063 90 GILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGS----------FL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 210 LALLGLIIAATgKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILSITLCLgAITTLFTAI 289
Cdd:MTH00063 159 CCLFFFLIVFT-KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL-LLTIFITGV 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 290 CAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMggllHSLPITS 369
Cdd:MTH00063 237 SSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCV----YSSILYG 312
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 56548702 370 SCLMTGS----LALMGTPFLAGFYSKDSIIEAMNTSYTNSWALTTTLIATSLTAVYSLR 424
Cdd:MTH00063 313 SWNLFYLfllvLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFR 371
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
49-426 |
1.12e-24 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 107.60 E-value: 1.12e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 49 LTTLMTFILTGQ-----ETTITNWQ------WlsINTFTLNLSFKFDYFSIIFI-------PIALYVTWSILEFSLwymy 110
Cdd:PRK05846 37 IGTLLTLLLSLVlwigfDSSNAGFQfvekhpW--IPRFGISYHLGVDGISLLLVvltalltPLAVLASWEEIKKRV---- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 111 sdpnihRFFKYLTLFLLTMIILV-SANNLFQLFIGWEGVGIMSFMLIGWWhARSDANTAALQAVLYNRIGDIGFMLSMAW 189
Cdd:PRK05846 111 ------KFYMAALLWLEGGVIGVfAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMLVAIIY 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 190 L----MINNNSWDLQQIFMTDMS----TLALLGLIIAATGKSAQFSLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL-- 258
Cdd:PRK05846 184 LvvvyYNATGTFDIADLLNLPLPpgvqYWLFLAFFIAFAVKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkm 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 259 ----LIRFH-PMIQTNSTILSITLC-LGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIG-LNQPHL--AFLHIC 329
Cdd:PRK05846 257 gaygLLRFSlPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFaGNQLGIqgAIFQMI 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 330 THAFFKAMLFLCSGSIIHSLNDEqDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIeaMNTSYTNSWAlt 409
Cdd:PRK05846 337 SHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVI-- 411
|
410 420
....*....|....*....|
gi 56548702 410 tTLIATS---LTAVYSLRII 426
Cdd:PRK05846 412 -AFIATTgliLAAVYSLWLY 430
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
70-397 |
3.17e-24 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 107.00 E-value: 3.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 70 LSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNihrFFKYLTLFLLTMIILV-SANNLFQLFIGWEGV 148
Cdd:PRK08668 54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDA---YFNMFALMSLAGVLGVfLANDLLTLYIFWEIM 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 149 GIMSFMLIgwWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSW---DLQQIFMTDMST----LALLGLIIAATG 221
Cdd:PRK08668 131 TFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFdfaDISQGLINDTSTgfalIVFLFLLAFGVA 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 222 KSAQFSLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRF------------HPMIQTNSTILSITLCLGAITTLFTA 288
Cdd:PRK08668 209 KAGIFPLHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFLLVlyvlpgtklfseFGTYRGVPLFNYILAWLGNISIIVGT 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 289 ICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHSlNDEQDIRKMGGLLHSL 365
Cdd:PRK08668 288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKM 366
|
330 340 350
....*....|....*....|....*....|..
gi 56548702 366 PITSSCLMTGSLALMGTPFLAGFYSKDSIIEA 397
Cdd:PRK08668 367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEA 398
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
67-484 |
7.28e-23 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 102.12 E-value: 7.28e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 67 WQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMySDPNIHRF-FKYLTLF-LLTMIILVSANNLFQLFIG 144
Cdd:COG1007 52 LALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGeFYALLLFaTLGMMLMASANDLLTLFLG 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 145 WEGVGIMSFMLIGWWHARSDANTAALQAVLynrIGDI--GFML-SMAWLMINNNSWDLQQIF-----MTDMSTLALLGLI 216
Cdd:COG1007 131 LELLSLSLYVLVAFRRDDRRSSEAALKYFL---LGALssGFLLyGISLLYGATGSLNLAGIAaalaaGGANSPLLLLGLV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 217 IAATG---KSAQFSLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-----FHPMIQTNSTILSItlcLGAITTLFT 287
Cdd:COG1007 208 LVLAGlafKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRllveaFPGLAADWQLLLAV---LAVLSMTVG 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 288 AICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLHS 364
Cdd:COG1007 284 NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARR 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 365 LPITSSCLMTGSLALMGTPFLAGFYSKDSIIEA-MNTSYtnsWALTTTLIATS-LTAVYSLRIIYFALLNQPrslplspl 442
Cdd:COG1007 364 SPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAaVEAGL---YWLAVIAVLNSvISAYYYLRVVKAMYFDEP-------- 432
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 56548702 443 NENNPHLINSITRLALgSIFAGFILTMNISPSSMVPLTMPAI 484
Cdd:COG1007 433 EEEAPISAPPGLRVAL-VIAALLVLLLGIFPGPLLDLAAAAA 473
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
133-397 |
3.81e-21 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 97.27 E-value: 3.81e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 133 VSANNLFQLFIGWEGVGIMSFMLIgwWHARSDANTAA-LQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTDMST-- 209
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV--WARGTKAAVRAgFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAaw 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 210 LALLGLIIaatgKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPmiqtnSTILSITLclGAITTLFTAI 289
Cdd:PRK12668 188 LILIGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP-----GTELLIYI--GAAMAVYGVF 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 290 CAITQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHSLNdEQDIRKMGGLLHSLP 366
Cdd:PRK12668 257 FALLENDLRRLLSYHIVSQVGYMVAGIGIGTAlaiNGAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMP 335
|
250 260 270
....*....|....*....|....*....|.
gi 56548702 367 ITSSCLMTGSLALMGTPFLAGFYSKDSIIEA 397
Cdd:PRK12668 336 LTALFCLVGALSISAFPLFSGFVSKSMIISA 366
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
73-390 |
9.63e-21 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 95.77 E-value: 9.63e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 73 NTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYM--------YSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIG 144
Cdd:PRK06458 57 EIFAAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMrhevehgeLSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVA 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 145 WEGVGIMSFMLIGWWHARSDANTA-------------ALQAV--LY----NRIGDIGfmLSMAWLMINNNSWDLQQIFMT 205
Cdd:PRK06458 137 IEATTLSSALLVGIYRTRASLEAAwkyiiicsvgvafALFGTilVYanaaTVMGDGE--MAILWTELLKHASLLDPTLMK 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 206 dmstLALLGLIIAATGKSAQFSLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFHPMIQTN------STILSItlc 278
Cdd:PRK06458 215 ----LAFVFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAigsdfpGRLLLI--- 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 279 LGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHSLnDEQDI 355
Cdd:PRK06458 287 FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDI 365
|
330 340 350
....*....|....*....|....*....|....*
gi 56548702 356 RKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYS 390
Cdd:PRK06458 366 NVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
93-346 |
7.26e-18 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 87.01 E-value: 7.26e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 93 IALYVT---WSILEFSLWYMYSDpniHRFFKYLTLFLLTMI---ILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDAN 166
Cdd:PRK08601 77 MAFFVLtlgFIIQRFSVRYLLGD---RSYRKYFALFTFTTGfasLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 167 TAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTDmsTLALLG----------LIIAATGKSAQFSLHPWLPSAM 236
Cdd:PRK08601 154 EAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLSNE--NLAQLGtwektginllLILAVMIPAAQWPFQRWLIESA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 237 EGPTPVSALLHSStMVVAGIFLLIRFHPMIqtNSTI-LSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVT 315
Cdd:PRK08601 232 VAPTPVSAIMHAG-LVNAGGIMLTRFSPLF--HDDIaQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQ 308
|
250 260 270
....*....|....*....|....*....|.
gi 56548702 316 IGLNQPHLAFLHICTHAFFKAMLFLCSGSII 346
Cdd:PRK08601 309 CALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-397 |
7.44e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 86.54 E-value: 7.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 79 LSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHrFFKYLTLFLLTMII-LVSANNLFQLFIGWEGVGIMSFMLIg 157
Cdd:PRK07691 71 IVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERY-YYYPSVLFMLAGVNgAFLTGDIFNLFVFFEVMLMASYVLI- 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 158 wwharSDANT-----AALQAVLYNRIGDIGFMLSMAWLM-------INNNSWDLQQIFMTD---MSTLALLGLIIAATgK 222
Cdd:PRK07691 149 -----VIGGTkiqlrESIKYVLINVVSSAFFVVAVAILYsvvgtlnMADISVKIAELSAGQtglITVVAILFLFVFAT-K 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 223 SAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNSTILS--ITLCLGAITTLFTAICAITQNDIKKI 300
Cdd:PRK07691 223 AGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKKI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 301 VAFSTSSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHsLNDEQDIRKMGGLLHSLPITSSCLMTGSL 377
Cdd:PRK07691 303 IIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAAL 381
|
330 340
....*....|....*....|
gi 56548702 378 ALMGTPFLAGFYSKDSIIEA 397
Cdd:PRK07691 382 SLAGIPPLSGFYGKFFIVEG 401
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
117-423 |
1.08e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 86.24 E-value: 1.08e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 117 RFFKYLTLFLLTMIILV-SANNLFQLFIGWEGVGIMSFMLIGWWHARSdANTAALQAVLYNRIGDIGFM---LSMAwLMI 192
Cdd:PRK12561 87 RLFYFLMLVLYSAQIGVfLAQDLLLFFLMWELELVPVYLLISIWGGQK-RLYAATKFILYTALASIFILvagLALA-LSG 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 193 NNNSWDLQQIFMTDMST----LALLGLIIAATGKSAQFSLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIR 261
Cdd:PRK12561 165 DTFTFDLAELGAKSYPLalelLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIR 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 262 FHPMIQTNSTIL--SITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTI------GLNQphlAFLHICTHAF 333
Cdd:PRK12561 238 FNVQMLPDAHVYfaPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG---AMLQMISHGL 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 334 FKAMLFLCSGSI---IHSLNdeqdIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTS--YTNSWAL 408
Cdd:PRK12561 315 IAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSdvYSSTFRT 390
|
330
....*....|....*...
gi 56548702 409 TTTLIATS---LTAVYSL 423
Cdd:PRK12561 391 ITILLAAVgliLTPIYLL 408
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
79-464 |
1.31e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 86.16 E-value: 1.31e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 79 LSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGW 158
Cdd:PRK12663 71 IQFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 159 WHARSDANtAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFM--------TDMSTLALLgLIIAATGKSAQFSLHp 230
Cdd:PRK12663 151 GQEREQLR-GAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMrlndmgdtATLTTIALL-FLLAFGMKAALFPFM- 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 231 WLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMI--QTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQ 308
Cdd:PRK12663 228 WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 309 LGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHsLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFL 385
Cdd:PRK12663 308 IGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPF 386
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 56548702 386 AGFYSKDSIIEAMNTSytNSWALTTTLIATSLTAVYSLRIIYFALLNQPRSLPLSPLNENNPHLINSITRLALGSIFAG 464
Cdd:PRK12663 387 SGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMG 463
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
69-466 |
2.03e-17 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 85.26 E-value: 2.03e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 69 WLSINTFTLNLSFKFDYFSIIFIPIALYVTWsileFSLWYMYSDPNIHRFFKYLTLFLLT---MIILVSANNLFQLFIGW 145
Cdd:PRK05777 57 GAAGGGTAFGGMLVVDGFALFLKGLILLASL----LALLLARPYLEDRGRGEFYLLVLFAllgMMVMVSANDLLTLFLGL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 146 EGVGIMSFMLIGWWHARSDANTAALQavlYNRIGDI--GFML-SMAWLMINNNSWDLQQIF-----MTDMSTLALLGL-- 215
Cdd:PRK05777 133 ELLSLPLYALAALRRDRRRSLEAAIK---YFVLGALasGFLLyGMSLLYGATGSLSFAGIAkaladGSGNSLLLLFGLvf 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 216 IIAATG-KSAQFSLHPWLPSAMEG-PTPVSALLHSSTMvVAGIFLLIR-----FHPMIQTNSTILSItlcLGAITTLFTA 288
Cdd:PRK05777 210 LLVGLAfKLSAVPFHMWTPDVYEGaPTPVTAFLATAPK-IAAFAVLLRllvvaFGGLSEDWQQVLAI---IAIASMLVGN 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 289 ICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLLHSL 365
Cdd:PRK05777 286 LAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRS 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 366 PITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSytNSWALTTTLIATSL-TAVYSLRIIYFALLNQPRSLPlsPLNE 444
Cdd:PRK05777 366 PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEA--GLWWLAVIGVLNSAiGAFYYLRVIKLMYFDEPPRDA--PVNW 441
|
410 420
....*....|....*....|..
gi 56548702 445 NNPHLINSITRLALGSIFAGFI 466
Cdd:PRK05777 442 PLSAGGAVLSVSALLVLVLGIF 463
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
111-485 |
8.62e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 80.13 E-value: 8.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 111 SDPNIHRFFKYLTLFLLTMIILVSA---NNLFQLFIGWEGVGIMSFMLIGWWHArSDANTAALQAVLYNRIGDIGFMLS- 186
Cdd:PRK06473 99 SDESIQRPRFYYSLLLLLNAGVSGAflaQDLLLFFLFYELELIPLYLLIAIWGG-QRRGYAATKFLLYTAISGILILVSf 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 187 --MAWLM-INNNSWDLQQIFMTDMST--LALLGLIIAATGKSAQFSLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLI 260
Cdd:PRK06473 178 lgLVWLSgASSFDYEPLRSHTLPLSTqlLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 261 RF--HPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFK 335
Cdd:PRK06473 257 RFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLIS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 336 AMLFLCSGsIIHSLNDEQDIRKMGGLLH---SLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWALttTL 412
Cdd:PRK06473 337 ALLFLLVG-VVYKKTGSRDVDVLRGLLNperGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLL--CM 413
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 56548702 413 IATSLTAVYSL----RIIYFALLNQPRSLPLSPLNENNPHLinsitrlalgsIFAGFILTMNISPSSMVPLTMPAIA 485
Cdd:PRK06473 414 IGTGLTAVYFLllvnRVFFGRLTAELSNLPRVLWSERLPAL-----------VLAVLIVVLGIQPSWLVRWTEPTAT 479
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
10-421 |
2.13e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 78.99 E-value: 2.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 10 MLTIIILtLPLLHNAI---FPNKthdFPLHCKNMITLAFTMSLTTLMTFILTGQETTITNWQWLS----INTFTLNLSFK 82
Cdd:PRK07363 1 MLSVLLW-LPILGAIIigfFPGN---LPSARLRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEylpwNEPLGLSYSLG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 83 FDYFSIIFIPIALYVTWsILEFSlwymySDPNIHRFFKYLTLFLLT---MIILVSANNLFQLFIGWEGVGIMSFMLIGWW 159
Cdd:PRK07363 77 VDGLSLPLLVLNSLLTW-IAIYS-----IGENTERPRLYYSLILLInggIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 160 HARSDAnTAALQAVLYNRIGD---IGFMLSMAWLMiNNNSWDLQQIFMTDMST---LALLGLIIAATG-KSAQFSLHPWL 232
Cdd:PRK07363 151 GGEKRG-YASIKFLIYTAVSGllvLAAFLGIVWLS-GSTSFDYDAISTQNLSLntqLILLTGLLLGFGiKIPLVPLHTWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 233 PSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMI--QTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLG 310
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 311 LMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGsIIHSLNDEQDIRKMGGLLH---SLPITSSCLMTGSLALMGTPF 384
Cdd:PRK07363 309 YILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGMASAGIPG 387
|
410 420 430
....*....|....*....|....*....|....*..
gi 56548702 385 LAGFYSKDSIIEAMNTSYTNSWALttTLIATSLTAVY 421
Cdd:PRK07363 388 LVGFVAEFIVFQGSFSTFPIPTLL--CIVASGLTAVY 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
120-426 |
2.49e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 79.01 E-value: 2.49e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 120 KYLTLFLLT----MIILVSaNNLFQLFIGWEGVGIMSFMLIGWWHARSdANTAALQAVLYNRIG------DIGFMLSM-A 188
Cdd:PRK12662 111 SFYSAFLLClgglLGILVS-NDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGatfyliGIGFLYAItG 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 189 WLMINNNSWDLQQIFMTDMSTLALLGLIIAATGKSAQFSLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR-FHPMI 266
Cdd:PRK12662 189 TLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYDVF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 267 QTNSTILS-----ITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAML 338
Cdd:PRK12662 268 KANFVFTTlpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSAL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 339 FLCSGSIIHSLnDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSytNSWA-LTTTLIATSL 417
Cdd:PRK12662 348 FMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIgLVVLLVGSGL 424
|
....*....
gi 56548702 418 TAVYSLRII 426
Cdd:PRK12662 425 SVIYVWKIV 433
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
87-395 |
3.83e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 75.18 E-value: 3.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 87 SIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDAN 166
Cdd:PRK08676 73 SVVFILAALYARGYVDHLLSNGELDPENLKVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENID 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 167 TA------ALQAVLYNRIGDIG-FMLSMAWLMINNNSWD----LQQIFMTDMSTLALLGLIIAATGKSAQFSLHPWLPSA 235
Cdd:PRK08676 153 AAlkyifiASTAMIFAFIGLIFlFSLTRQALGTGTLNWTelaaHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 236 -MEGPTPVSALLhSSTMVVAGIFLLIRFHPMIQTN---STILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGL 311
Cdd:PRK08676 233 yAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGL 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 312 MMVTIGLNQPHLAF---LHICTHAFFKAMLFLCSGsIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGF 388
Cdd:PRK08676 312 MLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLF 390
|
....*..
gi 56548702 389 YSKDSII 395
Cdd:PRK08676 391 LSKFFIL 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
215-423 |
5.78e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 71.54 E-value: 5.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 215 LIIAATGKSAQFSLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRFHPMIQTNSTILSITLCLGAITTLFTAI 289
Cdd:PRK12665 215 LLVAFGIKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGIL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 290 CAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGsIIHSLNDEQDIRKMGGLLHSLP 366
Cdd:PRK12665 290 GAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 56548702 367 ITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTN-SWALTTTLIATSLTAVYSL 423
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDGTWlAWALVAGGVVTSLLTLYAV 426
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
69-119 |
1.01e-12 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 62.83 E-value: 1.01e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 56548702 69 WLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFF 119
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
45-390 |
6.24e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 68.17 E-value: 6.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 45 FTMSLTTLMTFILTGQETTITNWQWLSINTFTLN----------LSFKFDYFSIIFIPIALYVTWSILEFslwymysdpn 114
Cdd:MTH00204 40 LFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQwgplvfavdgVSLFFILLTTLLIPICILISWKSIKF---------- 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 115 ihrFFKYLTLFLLTMIILV----SANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWL 190
Cdd:MTH00204 110 ---LFKEFLLCLLFLEVLLigvfSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 191 MINNNSWDLQQIFMTDMST----LALLGLIIAATGKSAQFSLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------L 259
Cdd:MTH00204 187 YSITGTTDYQILLNIKLPLsiqkWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLklggygF 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 260 IRF-HPMIQTNSTILS-ITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLmmVTIGLNQPHL-----AFLHICTHA 332
Cdd:MTH00204 260 LRFsWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHG 337
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 56548702 333 FFKAMLFLCSgSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTP----FLAGFYS 390
Cdd:MTH00204 338 FVSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPlscnFVGEFFS 398
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
120-429 |
1.26e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 67.25 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 120 KYLTL-FLLTMIIL-------VSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLM 191
Cdd:MTH00226 127 KYLTKsFLICMLILefllyavFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLY 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 192 INNNSWDL------QQIFMTDMSTLALLGLIIAATGKSAQFSLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFHP 264
Cdd:MTH00226 207 NIHGTTDYltlascSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWP 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 265 MIQTNSTILS-ITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVT------IGLNQPHLAFLhicTHAFFKAM 337
Cdd:MTH00226 287 ILPLGAQNLApAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITlvthdiIGLTGSIFIML---AHGIVSSL 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 338 LFLCSgSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKD-SIIEAMNTSYTNSWALTTTLIats 416
Cdd:MTH00226 364 LFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYlSILSSFNWNPIIGVFVCSGVI--- 439
|
330
....*....|...
gi 56548702 417 LTAVYSLriiYFA 429
Cdd:MTH00226 440 LSAVYSF---YFA 449
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
3-391 |
2.33e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 66.18 E-value: 2.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 3 LLLNSSAMLTIIILTLPLLHNAIFpnkthDFPLHCKNMITLAFtMSLTTLMTFIltgqetTITNWQWLSINTFTLNLSFK 82
Cdd:CHL00049 9 LLFDGSFIFPECILIFGLILLLMI-----DLTSDQKDIPWLYF-ISSTSLVMSI------TALLFQWREEPMISFSGNFQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 83 FDYFSIIF-IPIALYVTWSILEFSLWYMYSDPNIHRFFkyltLFLLTMII----LVSANNLFQLFIGWEGVGIMSFMLIG 157
Cdd:CHL00049 77 TNNFNEIFqFLILLCSTLCIPLSVEYIECTEMAITEFL----LFVLTATLggmfLCGANDLITIFVALECLSLCSYLLSG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 158 WWHARSDANTAALQAVLYNRIGDIGFMLSMAWLM-INNNSWDLQQIF-------MTDMSTLAL-LGLIIAATG-KSAQFS 227
Cdd:CHL00049 153 YTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYgLSGGEIELQEIVnglintqMYNSPGISIaLIFITVGIGfKLSLAP 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 228 LHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-----FHPMIQTNSTILSITLCLgaiTTLFTAICAITQNDIKKIV 301
Cdd:CHL00049 233 FHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEILAIL---SMILGNLIAITQTSMKRML 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 302 AFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFkaMLFLCSGS----IIHSLNDEQD-IRKMGGLLHSLPITSSCLMTGS 376
Cdd:CHL00049 309 AYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCL 386
|
410
....*....|....*
gi 56548702 377 LALMGTPFLAGFYSK 391
Cdd:CHL00049 387 LSLGGIPPLAGFFGK 401
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
228-388 |
6.06e-11 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 65.23 E-value: 6.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 228 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhPMIQTNSTIL--SITLCLGAITTLFTAICAITQNDIKKIVAFST 305
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTL-SLLGGNAPLWwgVALLVLGMITAFVGGLYALMEHNIQRLLAYHT 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 306 SSQLGLMMVTIG-------LNQPHLAFL-------HICTHAFFKAMLFLCSGSIIHSlNDEQDIRKMGGLLHSLPITSSC 371
Cdd:PRK08042 278 LENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIA 356
|
170
....*....|....*..
gi 56548702 372 LMTGSLALMGTPFLAGF 388
Cdd:PRK08042 357 MLVGLMAMAALPPLNGF 373
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
68-391 |
3.19e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 62.76 E-value: 3.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 68 QWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYM-YSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWE 146
Cdd:PRK02504 61 QWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 147 GVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLM-INNNSWDLQQI---FMTDMSTLALLGLIIAATG- 221
Cdd:PRK02504 141 TLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYgLSGGSTQLSAIalaLITSPSLGLALALVFVIAGi 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 222 --KSAQFSLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFhpmiqtnstilsITLCLGAITT----LFTA------ 288
Cdd:PRK02504 221 afKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTAlailsm 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 289 ----ICAITQNDIKKIVAFSTSSQLGLMMvtIGLnqphlaflhIC-THAFFKAMLF---------LC--SGSIIHSLNDE 352
Cdd:PRK02504 288 vlgnVVALAQTSMKRMLAYSSIGQAGFVM--IGL---------VAgTEAGYASMVFyllaylfmnLGafACVILFSLRTG 356
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 56548702 353 QD-IRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSK 391
Cdd:PRK02504 357 TDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
12-423 |
2.48e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.57 E-value: 2.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 12 TIIILTLPLLHNAIFpnkthdfplhCKNMITLAFTMSLTTLMTFILTGQETTITNWQWLSINTFtlnlsFKFDYFSIIFI 91
Cdd:MTH00206 1 KILIPLIMLLLMTIL----------SKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLY-----LSYDPLSSPLV 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 92 PIALYVTWSILEFSLWYMYSDP-NIHRFFKYLTLFLLTMIILV-SANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAA 169
Cdd:MTH00206 66 ILSCWLLPLMFLASQNHMKNEPiNRQRIYITLLIVLQLFLILFfSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 170 LQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTDMSTLAL----LGLIIAATGKSAQFSLHPWLPSA-MEGPTpvsa 244
Cdd:MTH00206 146 YYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNnlwwLACILAFLVKLPLYGVHLWLPKAhVEAPV---- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 245 llhSSTMVVAGIFL------LIRFHPMIQ-TNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIG 317
Cdd:MTH00206 222 ---AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGIL 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 318 LNQP---HLAFLHICTHAFFKAMLFlCSGSIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSI 394
Cdd:MTH00206 299 SGSPwgfKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLI 377
|
410 420
....*....|....*....|....*....
gi 56548702 395 IeaMNTSYTNSWALTTTLIATSLTAVYSL 423
Cdd:MTH00206 378 I--TSLFSWSNFTLPLLGLGFLFTAIYSL 404
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
242-397 |
1.97e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 56.96 E-value: 1.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 242 VSALLHSS---TMVVAGIFLLIRFHPMIQTNSTILSItLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGL 318
Cdd:PRK06277 233 GSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVL-IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLAL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 319 NQPH---LAFLHICTHAFFKAMLFLCSGsIIHSLNDEQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSII 395
Cdd:PRK06277 312 GTPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
|
..
gi 56548702 396 EA 397
Cdd:PRK06277 391 QA 392
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
10-312 |
3.54e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 56.14 E-value: 3.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 10 MLTIIILTLPLLHNAIFPNKTHDFPlhcknmITLAFTMSLTTLMTFILTGQetTITNWQWLSINTFTLNLSFKFDYFSII 89
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWP------ISISQSSLISLLSLFLLNNH--WSSSWHNLSLSLATDSLSSPLIILSCW 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 90 FIPIALYVTWSILEFslwymYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAA 169
Cdd:MTH00044 73 LAPLSLLASINHLSN-----NSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 170 LQAVLYNRIGDIGFMLSM-------AWLMINNNSWDLQQIFMTDMSTLALLGLIIAATGKSAQFSLHPWLPSA-MEGPTP 241
Cdd:MTH00044 148 LYFLFYTLFGSLPLLISLiaiysssSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVA 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 242 VSallhsstMVVAGIFL------LIR-----FHPMIQTNSTILSITLCLGAittLFTAICAITQNDIKKIVAFSTSSQLG 310
Cdd:MTH00044 228 GS-------MILAAILLklggygLIRlinlfSLPSANNISFILIVFCCWGA---LITSIICLRQTDLKALIAYSSVGHMS 297
|
..
gi 56548702 311 LM 312
Cdd:MTH00044 298 LV 299
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
40-320 |
3.85e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 55.90 E-value: 3.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 40 MITLAFTMSLTTLMTFILTgqETTITNWQWLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFF 119
Cdd:MTH00014 16 LIKYPWSWALTFSTLLLLS--LFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFM 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 120 KYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDL 199
Cdd:MTH00014 94 TNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSM 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 200 QQIFMTD----MSTLALLGLIIAATGKSAQFSLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPMIQT 268
Cdd:MTH00014 174 LMSSMEPpsiyLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMH 246
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 56548702 269 NST-----ILSITLCLGAITTLftaICaITQNDIKKIVAFSTSSQLGLMMVTIGLNQ 320
Cdd:MTH00014 247 INKslsapFSSISLVGAVITSL---IC-IRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
71-464 |
5.45e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 55.51 E-value: 5.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 71 SINTFTLNLSFKFdYFSIIFIPIALYVtWSILEFSLWYMYSdpnihrffkyLTLFLLTMIILVSANNLFQLFIGWEGVGI 150
Cdd:PRK12664 30 SEPVYNLDLVLFI-VLSFSLALIFLYI-LPIKNMRFSEMLC----------YLLYYISSIAAISSSSLTLVVIGFEFMAL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 151 MSFMLIGWWHARSDANTAALQAVLYNRIGDIgfmlsmawLMINNNSWDLQQIFMTDMSTLALLGLIIAAtgksAQFSLHP 230
Cdd:PRK12664 98 SALMIIAAGCPGGNIGAFIHYACVHFFSGVL--------LLVGASGQAQNGQYTGYCKLLFMLGLLINC----ACFPASS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 231 WLPSAMEGPTPVSALLHS--STMVVAGIFLLIRFHPmiqtnstilSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQ 308
Cdd:PRK12664 166 WVVDAYPAASNFGIIVLSlfTTKVAALVLLLFFSGE---------EILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQ 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 309 LGLMMVTIGLNQPH-----LAFLHICTHAFFKAMLFLCSGSIIHSlNDEQDIRKMGGLLhSLPITSSCLMTGSLALMGTP 383
Cdd:PRK12664 237 MGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR-TRKFNLNRVGGLF-KMSLEAMCCIIAILNMGAFP 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 384 FLAGFYSKDSIIEAMNTSYTNSWALTTT--LIATSLTAVYSLRIIYFALLNQPRSLPLSplNENNPHLINSITRLALGSI 461
Cdd:PRK12664 315 GTAGFVSKSLITHSIDTAGLTLVLYKKLflICSLLLFASVGLKFFWYAFISKSKSKPEA--EKVYIGSKLSMIILVLICV 392
|
...
gi 56548702 462 FAG 464
Cdd:PRK12664 393 VLG 395
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
117-420 |
5.58e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 55.48 E-value: 5.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 117 RFFKYLTLFLLTMIILVSA-NNLFQLFIGWEGVGIMSFMLIGWWHARSdANTAALQAVLYNRIGDIgFMLSMAWLMI--- 192
Cdd:PRK02546 115 KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLLLAIWGGKK-RQYAATKFILYTAGSSL-FILLAALAMAfyg 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 193 NNNSWDLQQIFMTDMST----LALLGLIIAATGKSAQFSLHPWLPSAM-EGPTPVSALLhsstmvvAGIFLLIRFHPMIQ 267
Cdd:PRK02546 193 DTPTFDMTALAAKDFGLgfqlLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLKMGGYALLR 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 268 TNSTIL--------SITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKA 336
Cdd:PRK02546 266 MNAGMLpdahaqfaPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDlgtSGAMLQMISHGLIGA 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 337 MLFLCSGSI---IHSLNDEQdirkMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSytNSWALTTTLI 413
Cdd:PRK02546 346 SLFFLVGATydrTHTLMLDE----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATS--DAYTLPFRVV 419
|
....*..
gi 56548702 414 ATSLTAV 420
Cdd:PRK02546 420 VVFLAAV 426
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
124-484 |
5.67e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 55.04 E-value: 5.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 124 LFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIF 203
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 204 MTDMSTLALLG---------LIIAATGKSAQFSLHPWLPSAMEG-PTPVSALLhsSTMVVAGIFLLIrfhpmIQTNSTIl 273
Cdd:MTH00196 81 LVLNSGQSFSSvsvpigyllIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSIL-----VSIGLNV- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 274 SITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQphLAFLHIC-THAFFKAMLFLCSGSIIHSLNDE 352
Cdd:MTH00196 153 NILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGS--FESIQASlVYLFIYIIMSICVFSIILALNVY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 353 QD-IRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMnTSYTNSWALTTTLIATSLTAVYSLRIIYFaLL 431
Cdd:MTH00196 231 KNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSG-VVYQYYLIFLLAVFCSVIAGVYYVRIVKI-LF 308
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 56548702 432 NQPRSLPLSPLNE-NNPHLINSITRLALGSIFAgFILTMNISPSSMVPLTMPAI 484
Cdd:MTH00196 309 FQANSFLLISTKIlKKENKINLRKALLIGFSLY-LILFTILSPNFFFQLAHWAI 361
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
195-429 |
1.18e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 54.06 E-value: 1.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 195 NSWDLQQIFMTDMS-TLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIQTNstil 273
Cdd:MTH00112 77 NAWNTGQWDITQLTnPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT---- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 274 sITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNqPHLAFLHICTHAFFKAMLFLcsgsIIHSLNdEQ 353
Cdd:MTH00112 153 -LLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS-TK 225
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 56548702 354 DIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMnTSYTNSWALTTTLIATSLTAVYSLRIIYFA 429
Cdd:MTH00112 226 TLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQEL-TKQNMTPTATIMAMLSLLSLFFYLRLTYIS 300
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
43-318 |
1.91e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 53.90 E-value: 1.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 43 LAFTMSLTTLMTFILTGQETTITNWQWL-SINTFTLNLSFKFDYFSIIF-------IPIALYVTWSILEFSlwymysdpn 114
Cdd:MTH00217 37 LTLTATILLWASFDGEGQFQAIKKFEWIpGIEPVFGPVVFAVDGISIFFliltallTPICILISWNSIKFL--------- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 115 IHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINN 194
Cdd:MTH00217 108 IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYA 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 195 NSWDLQQI----FMTDMSTLALLGLIIAATGKSAQFSLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRFH 263
Cdd:MTH00217 188 GTTDYQALcclkIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFS 260
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 56548702 264 ------------PMIQTNSTILSItlcLGAITTlftaiCaiTQNDIKKIVAFSTSSQLGLmmVTIGL 318
Cdd:MTH00217 261 wpllpeaseyfsPLIQTLSLLAII---YGSLTT-----C--RQVDLKRIIAYSSVAHMGL--VTLGI 315
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
77-318 |
1.45e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 51.33 E-value: 1.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 77 LNLSFKFDYFSIIFIPIALYVTWsileFSLWYMYSDpnihrffKYLT----LFLLTMIILVSANNLFQLFIGWEGVGIMS 152
Cdd:PRK06459 40 YEYNGVLSFFSIISTIVWILASL----YSIEYDHYG-------KWLSslyiLTILGMAIVLTSDNYLLFLAGWEIMTIPS 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 153 FMLIGWWharSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQIFMTDMSTLALLGLIIaatgKSAQFSLH--P 230
Cdd:PRK06459 109 YVAIALT---KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFII----KMGMMPFLvsE 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 231 WLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFHPMIQTNST--ILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSS 307
Cdd:PRK06459 182 WLPIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIE 260
|
250
....*....|.
gi 56548702 308 QLGLMMVTIGL 318
Cdd:PRK06459 261 NNGAILVALGL 271
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
72-423 |
1.68e-06 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 50.71 E-value: 1.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 72 INTFTLNLSFKFDYFSIIFIPIALYVTwSILEFSLWYMYSDPnihRFFKYLTLFLLT-MIILVSANNLFQLFIGWEGVGI 150
Cdd:CHL00011 71 INFFDFHWRLGIDGLSIGPILLTGFIT-TLATLAAWPVTRNS---RLFYFLMLAMYSgQIGLFSSRDLLLFFIMWELELI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 151 MSFMLIGWWHARSDAnTAALQAVLYNRIGDIGFM---LSMAWLMINNNSWDLQ----QIFMTDMSTLALLGLIIAATGKS 223
Cdd:CHL00011 147 PVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLLigvLGMGLYGSNEPTLNFEtlanQSYPVALEILFYIGFLIAYAVKL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 224 AQFSLHPWLPSamegpTPVSAllHSST-MVVAGIFLLIRFHPMIQTNSTIL----SI----TLCLGAITTLFTAICAITQ 294
Cdd:CHL00011 226 PIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIRINMELLphahSIfspwLVIVGAIQIIYAASTSLGQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 295 NDIKKIVAFSTSSQLGLMMVTI------GLNQphlAFLHICTHAFFKAMLFLCSGSI---IHSLNDEQdirkMGGLLHSL 365
Cdd:CHL00011 299 RNLKKRIAYSSVSHMGFIIIGIgsitdtGLNG---AILQIISHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPM 371
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 56548702 366 PITSSCLMTGSLALMGTPFLAGFYSKD----SIIEAMNTSYTNSWALT-TTLIATSLTAVYSL 423
Cdd:CHL00011 372 PKIFTMFSSFSMASLALPGMSGFVAELivffGIITSQKYLLMPKILITfVMAIGMILTPIYLL 434
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
77-316 |
1.96e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 50.36 E-value: 1.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 77 LNLSFKFDYFSIIFIPIALYVTWSILEFSLWYMYSDPNIHRFFKYLTLFLLTMIILVSANNLFQLFIGWEGVGIMSFMLI 156
Cdd:MTH00205 49 ISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 157 GWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDL----QQIFMTDMSTLALLGLIIAATGKSAQFSLHPWL 232
Cdd:MTH00205 129 LGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMffnfPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 233 PSA-MEGPTpvsallhSSTMVVAGIFL------LIRF-HPMIQTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFS 304
Cdd:MTH00205 209 PKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYS 281
|
250
....*....|..
gi 56548702 305 TSSQLGLMMVTI 316
Cdd:MTH00205 282 SVGHMGLMVVGV 293
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
69-316 |
2.71e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 50.15 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 69 WLSINTFTLNLSFKFDYFSIIFIPIALYVTWSILeFSLWYMYSDPNIHRFFKYLTLFLLTMIILV-SANNLFQLFIGWEG 147
Cdd:MTH00163 40 SLSFYFSNISYFFGLDLLSFGLILLSFWICMLMI-LSSESVYKKNNYSNLFLFLILFLLIFLLLTfSSMNLLLFYIFFES 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 148 VGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQI-FMTDMSTLALLGLIIAATGKSAQF 226
Cdd:MTH00163 119 SLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLnFFGSLNFLWYLSMILAFLVKMPMF 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 227 SLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPMIQTNSTILSITL-CLGAITTLFTAICAITQNDIK 298
Cdd:MTH00163 199 FVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFFSKLGLKFNYIWiSISLVGGVIVSLICLRQVDLK 271
|
250
....*....|....*...
gi 56548702 299 KIVAFSTSSQLGLMMVTI 316
Cdd:MTH00163 272 SLIAYSSVAHMGLVLGGL 289
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
122-468 |
1.35e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 47.66 E-value: 1.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 122 LTLFLLTMIILvSANNLFQLFIGWEGVGIMSFMLIGWWHArSDANTAALQAVLYNRIGDIGFMLSMAWLMINNNSWDLQQ 201
Cdd:MTH00200 11 LSLGLGTLLTF-SSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 202 IfmtdMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIqtNSTILsitLCLGA 281
Cdd:MTH00200 89 M----LGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPAL--NSNIL---LLLGL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 282 ITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNqPHLAFLHicthaFFKAMLFLCSGSIIHSLNDEQDIRKMGGL 361
Cdd:MTH00200 160 LSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSLSSS 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 362 LHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMnTSYTNSWALTTTLIATSLTAVYSLRIIYFALLNQPRSLPLSP 441
Cdd:MTH00200 234 KTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQEL-SKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMM 312
|
330 340
....*....|....*....|....*..
gi 56548702 442 LNENNPHLINSITRLALGSIFAGFILT 468
Cdd:MTH00200 313 SSWRTKSNSNLLVGLLLLLSILGLPLT 339
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
203-421 |
2.43e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 43.72 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 203 FMTDMSTLALLGLIIaatgKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhPMIQTNSTILSITLCLGAI 282
Cdd:MTH00144 82 FSWFSMSLLLLGLCL----KLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 283 TTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHSLndeqdirKMGGLL 362
Cdd:MTH00144 154 SALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-------KDLGSL 226
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 56548702 363 HSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSytNSWALTTTLIATSLTAVY 421
Cdd:MTH00144 227 KPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMES--SPLLLILLLLLGSLISLF 283
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
118-481 |
6.18e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 42.35 E-value: 6.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 118 FFKYLTLFLLTMIILvSANNLFQLFIGWEgVGIMSFMLIGWWHARSDANTAALQAVLYNRIGDIgFMLSMAWLMINNNSW 197
Cdd:MTH00197 1 FLFLFIIFGGVLFSL-SSSNWFLVWIGME-LNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSA-LLLMGGSLSFSNLYL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 198 DLQQIFMTDMSTLALLGLiiaatgksaqFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIrfhpmiqTNSTILSITL 277
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGA----------FPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILA-------FNSSSFMGLL 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 278 CLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHIcthAFFKAMLFLCSgsiIHSLNDEQDIRK 357
Cdd:MTH00197 141 ICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYL---IYFVIMFMLFL---FLSKNNLSSLNQ 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 358 MGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSytNSWALTTTLI-ATSLTAVYSLRIIYfallnqpRS 436
Cdd:MTH00197 215 QYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSS--NISLITFMLIlSTCFSLYYYLSLAY-------KS 285
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 56548702 437 LPLSPLNENNPHLINSITRLAlgsifagFILTMNISPSSMVPLTM 481
Cdd:MTH00197 286 LILSNWMINFLMKINLLYSGL-------FILLMMMLPLLMIFTMI 323
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
194-454 |
7.94e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 41.83 E-value: 7.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 194 NNSWDLQQIFMTDMST-LALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPMIqtNSTI 272
Cdd:MTH00070 76 INAWFTGEWTIMNMQTpLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL--NSNL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 273 LSItlcLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNqPHLAFLH-----ICTHAFFKAMLFLCSgsiih 347
Cdd:MTH00070 154 LII---MGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLMNLNS----- 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 348 slndeQDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKDSIIEAMNTSYTNSWAlTTTLIATSLTAVYSLRIIY 427
Cdd:MTH00070 225 -----TNINKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLA-TLMALSALLSLFFYLRLSY 298
|
250 260 270
....*....|....*....|....*....|
gi 56548702 428 FALLNQPRSLPLSPLN---ENNPHLINSIT 454
Cdd:MTH00070 299 AMSLTTSPNTSNSKLYwrfKNKTNNLLSLT 328
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
193-427 |
1.03e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 41.45 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 193 NNNSWDLqqifMTDMSTLALLGLIIAATGKSAQFSLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhpmiqTNSTI 272
Cdd:MTH00041 80 LSGSWSI----NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISI-----SNLLN 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 273 LSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLMMVTIGLNqPHLAFLHICTHAFFKAMLFLcsgsiIHSLNDE 352
Cdd:MTH00041 151 SNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIFL-----IGNNFSL 224
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 56548702 353 QDIRKMGGLLHSLPITSSCLMTGSLALMGTPFLAGFYSKdsIIEAMNTSYTNSWALTTTLIATSLTAVY-SLRIIY 427
Cdd:MTH00041 225 STLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNK--FISLYCLIQNNSILISIILIIGSLLSLFfYLRISF 298
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
108-312 |
1.37e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 41.36 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 108 YMYSDPNIHRFFKYLTLFLLTMIILV-SANNLFQLFIGWEGVGIMSFMLIGWWHARSDAntaaLQAVLYNRIGDIG---- 182
Cdd:MTH00150 46 KSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLLILGWGYQPER----LQAGMYMMLYTVGaslp 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56548702 183 --FMLSMAWLMINNNSWDLQQIFMTDMSTLALLGLII--AATGKSAQFSLHPWLPSA-MEGPTpvsallhSSTMVVAGIF 257
Cdd:MTH00150 122 llLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVflAFLVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGIL 194
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 56548702 258 L------LIRFHPMI-QTNSTILSITLCLGAITTLFTAICAITQNDIKKIVAFSTSSQLGLM 312
Cdd:MTH00150 195 LklggygILRMMMVFsLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLV 256
|
|
| |
