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helicase-primase subunit [Cercopithecine alphaherpesvirus 2]
Protein Classification
PHA03144 family protein ( domain architecture ID 10010436 )
PHA03144 family protein
List of domain hits
Name
Accession
Description
Interval
E-value
PHA03144
PHA03144 helicase-primase primase subunit; Provisional
1-740
0e+00
helicase-primase primase subunit; Provisional
Pssm-ID: 223000
Cd Length: 746
Bit Score: 771.22
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 1 M G EDG L AWAE E SVCA VT LY AA W L PPRT R DRLHAL L YLLCRDA R GD AV ARFAEV A V A S S ELQ - A F Y GP GEIS AA G AVAAAR 79
Cdd:PHA03144 1 M M EDG V AWAE G SVCA TS LY SL W T PPRT P DRLHAL V YLLCRDA A GD YT ARFAEV S V S S N ELQ t G F R GP ADVT AA R AVAAAR 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 80 AAA S PAA A PLE T L N DPALW R ALYAS A LAAL E R E VG GAPLFV P A R V G R DP R TGLV A RIE A APGG RP - V APR G A A L G V D A Q V 158
Cdd:PHA03144 81 AAA A PAA W PLE P L G DPALW K ALYAS V LAAL R R Q VG RFAFYS P L R F G V DP Q TGLV V RIE P APGG GE p A APR A A I L N V T A K V 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 159 AT DPLALAAH V A AR P A A R LA W ARLAAI Q D --- TP Q CAS A ASL A V R I D T G TARFAREY T TL T FPPV RK EGA VG D V FEVRE A 235
Cdd:PHA03144 161 DL DPLALAAH A A SS P G A S LA R ARLAAI R D gyf TP S CAS D ASL E V E I T T K TARFAREY D TL Q FPPV KR EGA MA D L FEVRE R 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 236 V LRPRGH a Q A VTARVLVPRG YEY F AVR AEGFSAPAL V AL F RQWH L TV H AAPGAL P PIFAFLGPE F EPRG GA VD H F A VLGF 315
Cdd:PHA03144 241 T LRPRGH - Q R VTARVLVPRG FDC F VAC AEGFSAPAL M AL Y RQWH A TV F AAPGAL V PIFAFLGPE L EPRG EE VD Y F C VLGF 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 316 PGWPTLKV P A G AA AVPAA AL T A HAE L A G A WPA A GARA LA P ARL WA AAAAG A P G R L S P A LR ------------- R PA TPGL 382
Cdd:PHA03144 320 PGWPTLKV S A A AA EAVRE AL A A YVL L D G L WPA L GARA FH P LAP WA PEDRA A A G S L T P R LR eaaarlqnglrdk W PA GRVS 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 383 RL LD P PAVIG P V C LA R F R F PGLEAR L AA AL CG lglepr ADP R DPL A RG AR cwral A ADAR PW AR A VAALALAEAREE CPA 462
Cdd:PHA03144 400 CI LD H PAVIG G V W LA K F D F SAFFPT L YL AL FP ------ GHE R LAR A VR AR ----- A RREK PW LK A ALVSFFGGLQHI CPA 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 463 FA R V L DGVVA AV GLR LE A AA GD V DL AVC GNEGASL WGVL N VDPQ --- G A AGP AA V ERARAA LEGV A GEA LA GG GLL R PE E 539
Cdd:PHA03144 469 AY R A L IALAN AV SRA LE R AA NA V GF AVC TYVKDGF WGVL G VDPQ dav S A DAL AA A ERARAA CQAA A EAV LA DM GLL L PE G 548
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 540 P P PS L E LEG I YTHAV L WSQ T G A W F WN A RTD ADRLE GFP Q R gpa Y AAA A AA TRRALRGAV AA Y A EG A G AE KA R L AA E EA L D 619
Cdd:PHA03144 549 A P LH L R LEG L YTHAV S WSQ H G Y W L WN R RTD TEDFV GFP L R --- S AAA R AA KAALRALLR AA V A DS A D AE TL R Q AA R EA C D 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 620 G LVLEAFARRLDAE Y W A V AEGP SDP G D TP PAAA L RGGALLD SERH SRRVVRVCGG p D GGS V A VP I DLYPRPLVLPPIDCA 699
Cdd:PHA03144 626 R LVLEAFARRLDAE F W S V PTPI SDP S D PL PAAA F RGGALLD ADHG SRRVVRVCGG - D CEP V P VP W DLYPRPLVLPPIDCA 704
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 56694730 700 HHLR DV LAEAE AV L R GAL AG LWGED GG -- FA YPFE E r F L FLF D 740
Cdd:PHA03144 705 HHLR PI LAEAE SM L N GAL SA LWGED EP fe VT YPFE D - F A FLF A 746
Name
Accession
Description
Interval
E-value
PHA03144
PHA03144 helicase-primase primase subunit; Provisional
1-740
0e+00
helicase-primase primase subunit; Provisional
Pssm-ID: 223000
Cd Length: 746
Bit Score: 771.22
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 1 M G EDG L AWAE E SVCA VT LY AA W L PPRT R DRLHAL L YLLCRDA R GD AV ARFAEV A V A S S ELQ - A F Y GP GEIS AA G AVAAAR 79
Cdd:PHA03144 1 M M EDG V AWAE G SVCA TS LY SL W T PPRT P DRLHAL V YLLCRDA A GD YT ARFAEV S V S S N ELQ t G F R GP ADVT AA R AVAAAR 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 80 AAA S PAA A PLE T L N DPALW R ALYAS A LAAL E R E VG GAPLFV P A R V G R DP R TGLV A RIE A APGG RP - V APR G A A L G V D A Q V 158
Cdd:PHA03144 81 AAA A PAA W PLE P L G DPALW K ALYAS V LAAL R R Q VG RFAFYS P L R F G V DP Q TGLV V RIE P APGG GE p A APR A A I L N V T A K V 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 159 AT DPLALAAH V A AR P A A R LA W ARLAAI Q D --- TP Q CAS A ASL A V R I D T G TARFAREY T TL T FPPV RK EGA VG D V FEVRE A 235
Cdd:PHA03144 161 DL DPLALAAH A A SS P G A S LA R ARLAAI R D gyf TP S CAS D ASL E V E I T T K TARFAREY D TL Q FPPV KR EGA MA D L FEVRE R 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 236 V LRPRGH a Q A VTARVLVPRG YEY F AVR AEGFSAPAL V AL F RQWH L TV H AAPGAL P PIFAFLGPE F EPRG GA VD H F A VLGF 315
Cdd:PHA03144 241 T LRPRGH - Q R VTARVLVPRG FDC F VAC AEGFSAPAL M AL Y RQWH A TV F AAPGAL V PIFAFLGPE L EPRG EE VD Y F C VLGF 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 316 PGWPTLKV P A G AA AVPAA AL T A HAE L A G A WPA A GARA LA P ARL WA AAAAG A P G R L S P A LR ------------- R PA TPGL 382
Cdd:PHA03144 320 PGWPTLKV S A A AA EAVRE AL A A YVL L D G L WPA L GARA FH P LAP WA PEDRA A A G S L T P R LR eaaarlqnglrdk W PA GRVS 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 383 RL LD P PAVIG P V C LA R F R F PGLEAR L AA AL CG lglepr ADP R DPL A RG AR cwral A ADAR PW AR A VAALALAEAREE CPA 462
Cdd:PHA03144 400 CI LD H PAVIG G V W LA K F D F SAFFPT L YL AL FP ------ GHE R LAR A VR AR ----- A RREK PW LK A ALVSFFGGLQHI CPA 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 463 FA R V L DGVVA AV GLR LE A AA GD V DL AVC GNEGASL WGVL N VDPQ --- G A AGP AA V ERARAA LEGV A GEA LA GG GLL R PE E 539
Cdd:PHA03144 469 AY R A L IALAN AV SRA LE R AA NA V GF AVC TYVKDGF WGVL G VDPQ dav S A DAL AA A ERARAA CQAA A EAV LA DM GLL L PE G 548
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 540 P P PS L E LEG I YTHAV L WSQ T G A W F WN A RTD ADRLE GFP Q R gpa Y AAA A AA TRRALRGAV AA Y A EG A G AE KA R L AA E EA L D 619
Cdd:PHA03144 549 A P LH L R LEG L YTHAV S WSQ H G Y W L WN R RTD TEDFV GFP L R --- S AAA R AA KAALRALLR AA V A DS A D AE TL R Q AA R EA C D 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 620 G LVLEAFARRLDAE Y W A V AEGP SDP G D TP PAAA L RGGALLD SERH SRRVVRVCGG p D GGS V A VP I DLYPRPLVLPPIDCA 699
Cdd:PHA03144 626 R LVLEAFARRLDAE F W S V PTPI SDP S D PL PAAA F RGGALLD ADHG SRRVVRVCGG - D CEP V P VP W DLYPRPLVLPPIDCA 704
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 56694730 700 HHLR DV LAEAE AV L R GAL AG LWGED GG -- FA YPFE E r F L FLF D 740
Cdd:PHA03144 705 HHLR PI LAEAE SM L N GAL SA LWGED EP fe VT YPFE D - F A FLF A 746
Herpes_HEPA
pfam03324 Herpesvirus DNA helicase/primase complex associated protein; This family includes HSV UL8, ...
228-321
1.62e-27
Herpesvirus DNA helicase/primase complex associated protein; This family includes HSV UL8, EHV-1 54, VZV 52 AND HCMV 102.
Pssm-ID: 367447 [Multi-domain]
Cd Length: 95
Bit Score: 106.71
E-value: 1.62e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 228 D V FEV REAV L RPR G HA qa VT A RVL V P RGYEYFAVRA E G F SAP ALVA L FR QW H LTVHAA PG A L P P I FA F LGP EFE P R G GAV 307
Cdd:pfam03324 4 D I FEV VDCA L VLG G RQ -- VT V RVL L P PAFDCLVTND E C F WNL ALVA F FR AL H EKIFGE PG G L V P L FA Y LGP GLN P E G EDF 81
90
....*....|....
gi 56694730 308 D H F AVL GFPG W P T L 321
Cdd:pfam03324 82 D Y F CSP GFPG F P N L 95
PksD
COG3321 Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
200-724
4.33e-08
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain]
Cd Length: 1386
Bit Score: 56.80
E-value: 4.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 200 R IDTG T AR F A RE Y -- TT L TFPPVRKEG A VGDVFEVREAVLRPRGH A Q A VT A RVLVPRGYEYF A VR A EGFSAPALVALFRQ 277
Cdd:COG3321 860 R VPLP T YP F Q RE D aa AA L LAAALAAAL A AAAALGALLLAALAAAL A A A LL A LAAAAAAALAL A AA A LAALLALVALAAAA 939
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 278 WH L TVH AA PG A LPPIFAFLGPEFEPRGG A VDHF A VLGFPGWPTLKVP A G AAA VP AA ALT A H A ELAG A WP A AGAR A L A P A R 357
Cdd:COG3321 940 AA L LAL AA AA A AAAAALAAAEAGALLLL A AAAA A AAAAAAAAAAAAA A A AAA AA AA LAA A A A LALL A AA A LLLA A A A A A A 1019
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 358 LWA A A AA GAPGRLSPALRRP A TPGLRLLDPPAVIGPVCL A RFRFPGLEAR L A AAL CG L G L EPR A DPRDPLARG A RCWR AL 437
Cdd:COG3321 1020 ALL A L AA LLAAAAAALAAAA A AAAAAAALAALAAAAAAA A ALALALAALL L L AAL AE L A L AAA A LALAAALAA A ALAL AL 1099
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 438 AA D A RPWARAVAAL ALA E A REECPAF A RVLDGVV AA VGLR L E AAA GDVDLAVCGNEG A S L WGV L NVDPQG AA GPAAVERA 517
Cdd:COG3321 1100 AA L A AALLLLALLA ALA L A AAAAALL A LAALLAA AA AAAA L A AAA AAAAALALAAAA A A L AAA L AAALLA AA ALLLALAL 1179
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 518 RA A LEGV A GE A LAGGG LL RPEEPPPSLE L EGIYTH A VLWSQTGAWFWN A RTD A DR L EGFPQRGP A Y AA A AAA TRRA L RGA 597
Cdd:COG3321 1180 AL A AALA A AL A GLAAL LL AALLAALLAA L LALALA A LAAAAAALLAAA A AAA A LA L LALAAAAA A V AA L AAA AAAL L AAL 1259
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 598 V A AYAEG A G A EK A R LAA EE A LDGLV L EAF A RRLD A EYWAV A EGPSDPGDTPP AAA LRGG A L L DSERHSRRVVRVCGGPDG 677
Cdd:COG3321 1260 A A LALLA A A A GL A A LAA AA A AAAAA L ALA A AAAA A AAALA A LLAAAAAAAAA AAA AAAA A A L AAALLAAALAALAAAVAA 1339
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 56694730 678 GSVAVPIDLYPRPLVLPPIDC A HHLRDVL A E A E A VLRGAL A GLWGED 724
Cdd:COG3321 1340 ALALAAAAAAAAAAAAAAAAA A ALAAAAG A A A A A AALALA A LAAAVA 1386
Name
Accession
Description
Interval
E-value
PHA03144
PHA03144 helicase-primase primase subunit; Provisional
1-740
0e+00
helicase-primase primase subunit; Provisional
Pssm-ID: 223000
Cd Length: 746
Bit Score: 771.22
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 1 M G EDG L AWAE E SVCA VT LY AA W L PPRT R DRLHAL L YLLCRDA R GD AV ARFAEV A V A S S ELQ - A F Y GP GEIS AA G AVAAAR 79
Cdd:PHA03144 1 M M EDG V AWAE G SVCA TS LY SL W T PPRT P DRLHAL V YLLCRDA A GD YT ARFAEV S V S S N ELQ t G F R GP ADVT AA R AVAAAR 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 80 AAA S PAA A PLE T L N DPALW R ALYAS A LAAL E R E VG GAPLFV P A R V G R DP R TGLV A RIE A APGG RP - V APR G A A L G V D A Q V 158
Cdd:PHA03144 81 AAA A PAA W PLE P L G DPALW K ALYAS V LAAL R R Q VG RFAFYS P L R F G V DP Q TGLV V RIE P APGG GE p A APR A A I L N V T A K V 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 159 AT DPLALAAH V A AR P A A R LA W ARLAAI Q D --- TP Q CAS A ASL A V R I D T G TARFAREY T TL T FPPV RK EGA VG D V FEVRE A 235
Cdd:PHA03144 161 DL DPLALAAH A A SS P G A S LA R ARLAAI R D gyf TP S CAS D ASL E V E I T T K TARFAREY D TL Q FPPV KR EGA MA D L FEVRE R 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 236 V LRPRGH a Q A VTARVLVPRG YEY F AVR AEGFSAPAL V AL F RQWH L TV H AAPGAL P PIFAFLGPE F EPRG GA VD H F A VLGF 315
Cdd:PHA03144 241 T LRPRGH - Q R VTARVLVPRG FDC F VAC AEGFSAPAL M AL Y RQWH A TV F AAPGAL V PIFAFLGPE L EPRG EE VD Y F C VLGF 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 316 PGWPTLKV P A G AA AVPAA AL T A HAE L A G A WPA A GARA LA P ARL WA AAAAG A P G R L S P A LR ------------- R PA TPGL 382
Cdd:PHA03144 320 PGWPTLKV S A A AA EAVRE AL A A YVL L D G L WPA L GARA FH P LAP WA PEDRA A A G S L T P R LR eaaarlqnglrdk W PA GRVS 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 383 RL LD P PAVIG P V C LA R F R F PGLEAR L AA AL CG lglepr ADP R DPL A RG AR cwral A ADAR PW AR A VAALALAEAREE CPA 462
Cdd:PHA03144 400 CI LD H PAVIG G V W LA K F D F SAFFPT L YL AL FP ------ GHE R LAR A VR AR ----- A RREK PW LK A ALVSFFGGLQHI CPA 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 463 FA R V L DGVVA AV GLR LE A AA GD V DL AVC GNEGASL WGVL N VDPQ --- G A AGP AA V ERARAA LEGV A GEA LA GG GLL R PE E 539
Cdd:PHA03144 469 AY R A L IALAN AV SRA LE R AA NA V GF AVC TYVKDGF WGVL G VDPQ dav S A DAL AA A ERARAA CQAA A EAV LA DM GLL L PE G 548
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 540 P P PS L E LEG I YTHAV L WSQ T G A W F WN A RTD ADRLE GFP Q R gpa Y AAA A AA TRRALRGAV AA Y A EG A G AE KA R L AA E EA L D 619
Cdd:PHA03144 549 A P LH L R LEG L YTHAV S WSQ H G Y W L WN R RTD TEDFV GFP L R --- S AAA R AA KAALRALLR AA V A DS A D AE TL R Q AA R EA C D 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 620 G LVLEAFARRLDAE Y W A V AEGP SDP G D TP PAAA L RGGALLD SERH SRRVVRVCGG p D GGS V A VP I DLYPRPLVLPPIDCA 699
Cdd:PHA03144 626 R LVLEAFARRLDAE F W S V PTPI SDP S D PL PAAA F RGGALLD ADHG SRRVVRVCGG - D CEP V P VP W DLYPRPLVLPPIDCA 704
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 56694730 700 HHLR DV LAEAE AV L R GAL AG LWGED GG -- FA YPFE E r F L FLF D 740
Cdd:PHA03144 705 HHLR PI LAEAE SM L N GAL SA LWGED EP fe VT YPFE D - F A FLF A 746
PHA03140
PHA03140 helicase-primase primase subunit; Provisional
13-739
2.15e-77
helicase-primase primase subunit; Provisional
Pssm-ID: 222998
Cd Length: 772
Bit Score: 264.88
E-value: 2.15e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 13 V CA VTL Y A AW LPP -- R T R DRLHA LLYLLC RDAR G DAVAR FAE VA V ASSE L QAFY - GP G EIS AA GAVAA -- A RAA A S P A A A 87
Cdd:PHA03140 15 I CA ASI Y S AW TQG gd R A R EYPYV LLYLLC KRGD G GYDPV FAE IT V LAED L CRYS r HA G DVT AA TLASL cr A ASS A A P D A W 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 88 PLE T L NDPAL WR A LY A SALA A L E R EV G GAPLFV P A R V G R D PR TGL - V ARIE A APGGRPV AP RGAA L GVDAQ VA TDPL A LA 166
Cdd:PHA03140 95 PLE P L GNADT WR C LY G SALA T L R R RL G FFSFYS P V R F G T D TA TGL l V KAEP A PDATADA AP STGV L RAALR VA IEES A VR 174
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 167 A HV AA R P AAR LA W ARL A A IQ D TPQC A SAAS L AVRID T G TAR FA R E Y TTLTF PP VRKE G AVG DVF EV RE AVLRPR G HA q A V 246
Cdd:PHA03140 175 A CA AA A P GGS LA Y ARL C A LK D GHAN A PGTA L EFELT T K TAR IY R S Y ASIFS PP RERA G RLS DVF NL RE YRVCTS G GR - A T 253
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 247 TA RVL V P R G YEYFAVR A EGF S APALVALF RQW HLTVHAA PG ALPP I F A F LGPE FE P R G GAV D H F AVL GFPGW P TL KVPAG 326
Cdd:PHA03140 254 VV RVL L P V G FDCLVTD A RVT S PLSALLVY RQW YAAAFGK PG GPRQ I L A Y LGPE LS P G G EER D Y F CTV GFPGW T TL RTSTP 333
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 327 A A AVPAA AL T A HA E LA G A WP AA G AR A LAPARL W AAAAAGAPGR L SP --- A L RR -------------- PA TPGLRL LD P P A 389
Cdd:PHA03140 334 D A ESVRD AL E A YV E TD G L WP VT G IH A FHYLAP W DFHPPLPVAG L DR ria A A RR alpagggsgdgadw PA GRISTI LD S P V 413
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 390 VIGPVC LA R F R F PGLEARLAA AL C glglepradprd P L - AR G AR CW RA LAADA RP WARAVAALALAEA R EEC P AFARVLD 468
Cdd:PHA03140 414 CVRDLW LA K F D F SAFFPTIYC AL F ------------ P E h AR L AR II RA RRRRG RP CLKPALVTFFGGL R HIH P PAYKAII 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 469 GVVA A VGLRL E A AA GDVDL A V C GNEGASL WG VL - NVD P QGAAGP AA VER A --- R AAL E GVAGEA L AGGGL LRP - E EPP P S 543
Cdd:PHA03140 482 ALAN A ISACV E R AA NERNF A I C TYVKDGF WG AF g DLV P GAVSRD AA RAA A lal R DDC E RAVEAV L RDDLG LRP a E GAE P H 561
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 544 L EL EG IY THAV L W SQ TG A W F WNA R T DA - DR L E G F P Q R ----------- GPAYAA A A A ATR R ALRGAVAAYAEGAGAEKAR 611
Cdd:PHA03140 562 L RF EG VF THAV S W CT TG Y W L WNA T T GE s EH L V G V P C R seaardakesl AGLLCR A V A IRE R LYASTWTVSNYITWPGDTV 641
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 612 L AA EE A L D G LV LE AF A RR L D AE YW AVAEGPS D P G d TP P AA AL R GG AL LD SERHS R RV V R V C G - G P DGGSVAV P ID LY PR P 690
Cdd:PHA03140 642 A AA AA A C D A LV HA AF E RR G D VR YW SATAPIG D W G - AV P RS AL S GG DM LD KDHKP R QY V L V R G h I P EAAPFPL P WT LY RA P 720
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 56694730 691 LV LPPIDC AH HL RDV L AEAEAVLR GALA G lw G E D G G FAYP - FE --- ERFL FLF 739
Cdd:PHA03140 721 VC LPPIDC RA HL APL L QTFARMIN GALA A -- G N D F G EPPT k FE ydl ADYD FLF 771
PHA03181
PHA03181 helicase-primase primase subunit; Provisional
13-738
6.99e-43
helicase-primase primase subunit; Provisional
Pssm-ID: 165452
Cd Length: 764
Bit Score: 166.63
E-value: 6.99e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 13 V C AV TLY AA W LPPRTRDR L H AL L YLL C R DAR G DAV A RFAE V AVASSE L QAFY G -- P GE I SA A GAVAA A R AA ASPAAA P LE 90
Cdd:PHA03181 19 I C YT TLY RL W TSSNRTEG L T AL C YLL F R NVC G NYS A HYST V NFSGKS L AKAW G ln P DT I TD A TLASM A N AA SVTGRW P SC 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 91 TLNDPA LW R AL Y A SA LA A L EREV G GAPLFV P ARVGR D PR TGLV ARI E AAP G G R p VA PR GAA L GV D AQVATDPLA L AAHVA 170
Cdd:PHA03181 99 NADQHT LW K AL L A FT LA K L RHRL G YHAYYT P VNMYV D KI TGLV LSC E PLN G E R - YK PR PGL L KT D GTINVEESS L LSTAM 177
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 171 ARPAARLAWARLAAIQDTPQCASAASLAVR I D T GTA RF A REY TTLTFPPVR - K EGAVGDV F E V R E AV L RPR G HAQA V TAR 249
Cdd:PHA03181 178 KFTEGATLAHIKLSALKNIETIPEFDARIE I Q T KED RF Y REY KSVSSRTKK t K LHNSNNI F H V V E KP L ILD G SQAP V RTL 257
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 250 V LVP RGYEYFAVRAEG FS AP AL V A LFRQ WH LTVHAAP G A ---- L P PIF AFL GPE FE PRG GA VD HFAVL GFPGWP TL K VPA 325
Cdd:PHA03181 258 T LVP TSFDCLVTTPAE FS LS AL L A IYAK WH EKLYSTA G G seki L T PIF TYI GPE TN PRG ED VD YACII GFPGWP MV K SST 337
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 326 GAAAVPAA A LTAH A ELA G A WP A AG A --------- R ALAPARLWAAAAAGAPGRLSP A LR R P A --- T P G l R L --- LDP P AV 390
Cdd:PHA03181 338 ASHLAIKE A IDSY A ATD G L WP L AG P rtfhllapw R PENHPSPTIDICHYLKAESNV A RG R I A ddw T E G - R I tci FRE P TL 416
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 391 I GPVCL A R F R F PGLE A R L A aalcg LGL E P - RADP RD pl A RG AR CW R alaad ARP W ARAVAALALAEAREECPAFARVLD G 469
Cdd:PHA03181 417 I ENAAI A K F D F SAFF A T L Y ----- LGL F P c HSRL RD -- A VK AR LR R ----- EKD W LKRPIVEFGGLLKHFREDVYKAII G 484
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 470 VVAAVG L RL EA A A GDVDL A V C GNEGASL WG VLNVDPQGAAGPA ----- AV E RA R A A LEGV A GEALAGG GL LR P EEPPPSL 544
Cdd:PHA03181 485 IGNHIS L EV EA T A STLMF A P C TYVKDGM WG TFIDKANNVIVSP egnen IF E TL R V A CNES A NRLATSI GL RF P DGINLQM 564
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 545 E LEG I YTHA VL W SQTGA W F WN AR T DADRLE GFP QRGPAYAA A AA A TRRA L RGAVAAYAEGAGAEKARLAAEEALDG L VLE 624
Cdd:PHA03181 565 R LEG V YTHA MS W NANCY W L WN RN T RESDFV GFP KQPEFATH A KE A LSTL L EEICLCNDTDESLLTIQEKVQKVFEE L LYM 644
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 625 AF AR R L DA EY W AVAEGPS D pg DT PPAA AL -- RGG A LL D SERHS R RV V RVCGG p DG GS V A V PID L YP - RPLV LP P I D C AH H 701
Cdd:PHA03181 645 AF KK R G DA SF W SCPTESY D -- DT LYIV AL gs KAA A RF D TSAFR R EM V QTVTT - DG NI V P V TCS L FE g THFI LP A I S C ID H 721
730 740 750 760
....*....|....*....|....*....|....*....|
gi 56694730 702 LRDV L AEAEAV L RGA LA GL W G -- ED G G F AYPF E E - RF L F L 738
Cdd:PHA03181 722 MKPI L SAFSRL L ISV LA SK W P nv DQ G S F TFDV E H y RF M F I 761
Herpes_HEPA
pfam03324 Herpesvirus DNA helicase/primase complex associated protein; This family includes HSV UL8, ...
228-321
1.62e-27
Herpesvirus DNA helicase/primase complex associated protein; This family includes HSV UL8, EHV-1 54, VZV 52 AND HCMV 102.
Pssm-ID: 367447 [Multi-domain]
Cd Length: 95
Bit Score: 106.71
E-value: 1.62e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 228 D V FEV REAV L RPR G HA qa VT A RVL V P RGYEYFAVRA E G F SAP ALVA L FR QW H LTVHAA PG A L P P I FA F LGP EFE P R G GAV 307
Cdd:pfam03324 4 D I FEV VDCA L VLG G RQ -- VT V RVL L P PAFDCLVTND E C F WNL ALVA F FR AL H EKIFGE PG G L V P L FA Y LGP GLN P E G EDF 81
90
....*....|....
gi 56694730 308 D H F AVL GFPG W P T L 321
Cdd:pfam03324 82 D Y F CSP GFPG F P N L 95
PksD
COG3321 Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
200-724
4.33e-08
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain]
Cd Length: 1386
Bit Score: 56.80
E-value: 4.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 200 R IDTG T AR F A RE Y -- TT L TFPPVRKEG A VGDVFEVREAVLRPRGH A Q A VT A RVLVPRGYEYF A VR A EGFSAPALVALFRQ 277
Cdd:COG3321 860 R VPLP T YP F Q RE D aa AA L LAAALAAAL A AAAALGALLLAALAAAL A A A LL A LAAAAAAALAL A AA A LAALLALVALAAAA 939
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 278 WH L TVH AA PG A LPPIFAFLGPEFEPRGG A VDHF A VLGFPGWPTLKVP A G AAA VP AA ALT A H A ELAG A WP A AGAR A L A P A R 357
Cdd:COG3321 940 AA L LAL AA AA A AAAAALAAAEAGALLLL A AAAA A AAAAAAAAAAAAA A A AAA AA AA LAA A A A LALL A AA A LLLA A A A A A A 1019
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 358 LWA A A AA GAPGRLSPALRRP A TPGLRLLDPPAVIGPVCL A RFRFPGLEAR L A AAL CG L G L EPR A DPRDPLARG A RCWR AL 437
Cdd:COG3321 1020 ALL A L AA LLAAAAAALAAAA A AAAAAAALAALAAAAAAA A ALALALAALL L L AAL AE L A L AAA A LALAAALAA A ALAL AL 1099
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 438 AA D A RPWARAVAAL ALA E A REECPAF A RVLDGVV AA VGLR L E AAA GDVDLAVCGNEG A S L WGV L NVDPQG AA GPAAVERA 517
Cdd:COG3321 1100 AA L A AALLLLALLA ALA L A AAAAALL A LAALLAA AA AAAA L A AAA AAAAALALAAAA A A L AAA L AAALLA AA ALLLALAL 1179
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 518 RA A LEGV A GE A LAGGG LL RPEEPPPSLE L EGIYTH A VLWSQTGAWFWN A RTD A DR L EGFPQRGP A Y AA A AAA TRRA L RGA 597
Cdd:COG3321 1180 AL A AALA A AL A GLAAL LL AALLAALLAA L LALALA A LAAAAAALLAAA A AAA A LA L LALAAAAA A V AA L AAA AAAL L AAL 1259
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 56694730 598 V A AYAEG A G A EK A R LAA EE A LDGLV L EAF A RRLD A EYWAV A EGPSDPGDTPP AAA LRGG A L L DSERHSRRVVRVCGGPDG 677
Cdd:COG3321 1260 A A LALLA A A A GL A A LAA AA A AAAAA L ALA A AAAA A AAALA A LLAAAAAAAAA AAA AAAA A A L AAALLAAALAALAAAVAA 1339
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 56694730 678 GSVAVPIDLYPRPLVLPPIDC A HHLRDVL A E A E A VLRGAL A GLWGED 724
Cdd:COG3321 1340 ALALAAAAAAAAAAAAAAAAA A ALAAAAG A A A A A AALALA A LAAAVA 1386
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
