|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-719 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1408.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 1 MEHTYQYSWIIPLVPLPVPMLIGVGLLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRTWTITSD 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 81 LSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 161 LIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVNLLFVTLCAFLLFAGPVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 321 YSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYFPDKSQNMVLMGGLRKHVPITKTAFLV 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 401 GTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGPFNFCLQNYSGKKRNSLYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 481 KEEPKPIKNkfhLVALLTMNNNKRASFFAKKTHRIASTVTNMPFITIFPFGAAKTFCYPHESDNTILFVMLVLVLFPLFV 560
Cdd:CHL00025 481 KEESKKINK---LLLLLTMNNNERVSFFSKKTYKIDGNVRNMIRSFITIFGNKKTFSYPHESDNTMLFPLLVLVLFTLFV 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 561 GAIGIPLNQEVIESDILSKLLTPSINLLQQNSTHFVDWYEVVKNPTLSVSITYFGILLAYFLYKPFYSSLHNWNILNFFA 640
Cdd:CHL00025 558 GFIGIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFV 637
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114329704 641 KRGPKRILWDKILNFLYDWSYNRAYIDAFYTRSLTEGIRGLAELTHLFDRRVIDGITNGVGITSFFVGEGIKYLGGSRI 719
Cdd:CHL00025 638 KGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGRI 716
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-718 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 690.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 1 MEHTYQYSWIIPLVPLPVPMLIGVGLLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRTWTITSD 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 81 LSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 161 LIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVNLLFVTLCAFLLFAGPVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 321 YSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYFPDKSQNMVLMGGLRKHVPITKTAFLV 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 401 GTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGPFnfclqnysgkkrnslysislwg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEGEF---------------------- 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 481 KEEPKPIKNKFHLVALLTMNNNKRASFFAKKTHRIAStvtnmpfitifpfgaaktfcyPHESDNTILFVMLVLVLFPLFV 560
Cdd:PRK07376 459 RGNDKELQKELLAAADAPGHHEGHHEEHGEHHHHSGS---------------------PHESPWTMTLPLVVLAVPSVLI 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 561 GAIGIPLNqeviesDILSKLLTPSINLLQQnSTHFvDWYEVVKNPTLSVSITYFGILLAYFLYkpfysSLHNWNiLNFFA 640
Cdd:PRK07376 518 GLLGTPWN------NRFEAFLHAPGEALEA-AAHF-EWGEFLILAGASVGIALIGITLASLMY-----LLKKID-PAAIA 583
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 114329704 641 KRGPKrilwdkilnfLYDWSYNRAYIDAFYTRSLTEGIRGLAELTHLFDRRVIDGITNGVGITSFFVGEGIKYLGGSR 718
Cdd:PRK07376 584 ERFPP----------LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENGR 651
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-714 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 540.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 5 YQYSWIIPLVPLpvpmligVGLLFFPTATKNLRRMWAF-ISILLLSIVMIFSIDLSIEQIDRTSIYQSLrTWTITSDLSF 83
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLLFPAVLGGEVVVELY-TWIPVGSLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 84 EFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIG 163
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 164 FWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIynnevNLLFVTLCAFLLFAGPVAKSAQ 243
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYST 323
Cdd:COG1009 228 FPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 324 MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyfpdkSQNMVLMGGLRKHVPITKTAFLVGTL 403
Cdd:COG1009 308 VSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGAL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 404 SLCGIPPLACFWSKDEILNDTW---LYSPIFATIAFFTAGLTAFYMFRIYLLTFegpfnfclqnysgkkrnslysislWG 480
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FG 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 481 KEEPKPIKNkfhlvalltmnnnkrasffakkthriastvtnmpfitifpfgaaktfcyPHESDNTILFVMLVLVLFPLFV 560
Cdd:COG1009 435 KPRPKTPKH-------------------------------------------------PHESPWLMTLPLVVLAVLSLVL 465
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 561 GAIGIPLNQEVIESDilsklltpSINLLQQNSTHFVdwyeVVKNPTLSVSItyFGILLAYFLYkpfysslhnwnilnffa 640
Cdd:COG1009 466 GLLLPGLLEGLLAPA--------AVLGGELHLAHGL----LLNALPLLLSL--LGIALGYLLY----------------- 514
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114329704 641 KRGPKRILWDKiLNFLYDWSYNRAYIDAFYTRSLTEGIRGLAELTHlFDRRVIDGITNGVGITSFFVGEGIKYL 714
Cdd:COG1009 515 LKRPLPALAER-LKPLYRLLANKWYFDELYDALFVKPVRALARFLW-FDRYVIDGIVNGLARLTLFSGRLLRRL 586
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-711 |
1.81e-176 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 518.94 E-value: 1.81e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 7 YSWIIPLVPLpVPMLIgvgLLFFPTATKNLRRMWafISILLLSIVMIFSIDLSIEQIDRT--SIYQSLRTWTITSDLSFE 84
Cdd:PRK06590 4 LLWLIVLLPL-IGALI---LGLFGRRIGEKWAHL--VGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDFDVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 85 FGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGF 164
Cdd:PRK06590 78 FGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 165 WFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEilkNLIYNNEVNLLFVTLCAFLLFAGPVAKSAQF 244
Cdd:PRK06590 158 WYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFA---AAPQFFGLGWSALTLICLLLFIGAMGKSAQF 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTM 324
Cdd:PRK06590 235 PLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTM 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 325 SQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTAFLVGTLS 404
Cdd:PRK06590 315 SQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLIGTLA 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 405 LCGIPPLACFWSKDEILNDTWLYSPIFA-TIAFFTAGLTAFYMFRIYLLTfegpfnfclqnysgkkrnslysislwgkee 483
Cdd:PRK06590 387 LIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLV------------------------------ 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 484 pkpiknkfhlvalltmnnnkrasFFAKKTHRIAstvtnmpfitifpfgaaktfcYPHESDNTILFVMLVLVLFPLFVGAI 563
Cdd:PRK06590 437 -----------------------FHGKEKEKIH---------------------HPHESPAVMTLPLIVLAVLSVFAGAL 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 564 GIPLNQEViesdilskLLTPSINLLQQNSTHFVDWyevVKNPTLSVSITyfGILLAYFLYKpfysslhnwnilnffaKRG 643
Cdd:PRK06590 473 IVPPFLGV--------LPLTTELAHGEAEHHLPVW---VALLPLVVALA--GIALAWLLYL----------------KKP 523
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114329704 644 PKRILWDKILNFLYDWSYNRAYIDAFYTRSLTEGIRGLAE-LTHLFDRRVIDGITNGVGITSFFVGEGI 711
Cdd:PRK06590 524 TLPTSIAAPGRFLYTLLRNKYYFDELYEKVFVKPGLALARlLWKDGDDGIIDGLVPNSARLVGGGSRVL 592
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-708 |
6.04e-151 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 452.89 E-value: 6.04e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 44 SILLLSIVMIFSIDLSIEQIDRTSIYQSLRTWTITSDLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLR 123
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 124 FFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSF 203
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 204 EFRDLFEILKNLIYNnevnllFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
Cdd:TIGR01974 196 NFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 284 FIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSI 363
Cdd:TIGR01974 270 FELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSV 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 364 IHSMEaivgyfpdKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTW--LYSPIFATIAFFTAGL 441
Cdd:TIGR01974 350 IHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 442 TAFYMFRIYLLTfegpfnfclqnysgkkrnslysislwgkeepkpiknkfhlvalltmnnnkrasFFAKKTHRIAStvtn 521
Cdd:TIGR01974 422 TAFYSFRLIFMV-----------------------------------------------------FHGKERHEADA---- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 522 mpfitifpfgaaktfcYPHESDNTILFVMLVLVLFPLFVGAIGIPLNQeviesdilskLLTPSINLLQQNSTHFVDWYEV 601
Cdd:TIGR01974 445 ----------------HPHESPLVMLLPLIVLAVGSVFAGFFIVPLFE----------FLKGVLPTSAEPALEHHHVPAL 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 602 VKNPTLSVSITyfGILLAYFLYkpfyssLHNWNILNFFAKRGPkrilwdKILNFLydwsYNRAYIDAFYTRSLTEGIRGL 681
Cdd:TIGR01974 499 EIWSPTAVAIL--GILLAYLLY------LGNPTLPAKIAQRHS------GLYRLL----LNKWYFDELYDKVFVKPYLFL 560
|
650 660
....*....|....*....|....*...
gi 114329704 682 AELTHLF-DRRVIDGITNGVGITSFFVG 708
Cdd:TIGR01974 561 GKLLWKDpDDKIIDGFGPGIARLVGAIS 588
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-689 |
1.12e-130 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 387.35 E-value: 1.12e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 448 RIYLLTFEGPFNFCLQNYSGKKRNSLYSISLWGKEEPKPIKNKFHLVALLTMNNNKRASFFAKKTHRIASTVTNM--PFI 525
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMtrPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 526 TIFPFGAAKTFCYPHESDNTILFVMLVLVLFPLFVGAIGIPLNQEVIESDILSKLLTPSINLLQQNSTHFVDWYEVVKNP 605
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 606 TLSVSITYFGILLAYFLYKPFYSSLHNWNILNFFAKRGPKRILWDKILNFLYDWSYNRAYIDAFYTRSLTEGIRGLAELT 685
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 114329704 686 HLFD 689
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
67-454 |
3.58e-106 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 336.98 E-value: 3.58e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 67 SIYQSLRTWTITSDLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQ 146
Cdd:MTH00210 56 ATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQ 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 147 IYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVnllfv 226
Cdd:MTH00210 136 LFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL----- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 227 TLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGA 306
Cdd:MTH00210 211 TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 307 TLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGG 386
Cdd:MTH00210 291 TVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMRKMGG 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 387 LRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTW-LYSPIFAT-IAFFTAGLTAFYMFRIYLLTF 454
Cdd:MTH00210 363 LIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTF 432
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-454 |
8.19e-105 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 333.58 E-value: 8.19e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 46 LLLSIVMIFSIDLSI-----EQIDRTSIYQSLRTWTITSDLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 121 YLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLT 200
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 201 GSFEFRDLFEILKNLIYNNevnllfVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 281 LPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGS 360
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 361 GSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWL-YSPIFAT-IAFFT 438
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410
....*....|....*.
gi 114329704 439 AGLTAFYMFRIYLLTF 454
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-713 |
6.66e-86 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 283.72 E-value: 6.66e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 6 QYSWIIPLVPLpvpmlIGvGLLFFPTATKNLRRMW----AFISILLLSIVMIFSIDLSIEQIDRTSIYQSLrTWTITSDL 81
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRRTGprpaAYLNLLMTLLAFVHSLLALRAIWNQPPQQLSF-PWLQVADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 82 SFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLL 161
Cdd:PRK07390 80 DLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 162 IGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKnliyNNEVNLLFVTLCAFLLFAGPVAKS 241
Cdd:PRK07390 160 VGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA----TANLDPLTATLLGLALIAGPTGKC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 242 AQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAY 321
Cdd:PRK07390 236 AQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 322 STMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIhsmeaivgyFPDKSQNMVLMGGLRKHVPITKTAFLVG 401
Cdd:PRK07390 315 STSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII---------LTTITQDLTELGGLWSRMPATTLAFLVG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 402 TLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGPfnfclqnysgkkrnslysislwgk 481
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGK------------------------ 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 482 eePKPiknkfhlvalltmnnnkrasffakKTHRIASTVTNMpfitIFPfgaaktfcyphesdntilfvMLVLVLFPLFVg 561
Cdd:PRK07390 442 --PQQ------------------------KTRRSPEVLWPM----ALP--------------------MVILAGFTLHL- 470
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 562 aigiPLnqeviesdILSKLltpsiNLLQqnSTHFVDWYEVvknPTLSVSiTYFGILLAYFLYkpfyssLHNwnilnffAK 641
Cdd:PRK07390 471 ----PL--------LLQQW-----GLLP--SWEALNLWAA---PLLVAS-GLLGVLLGAWIY------LNK-------AW 514
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 114329704 642 RGPKRILWDKILNFL-YDWsynraYIDAFYTRSLTEGIRGLAELTHLFDRRVIDGITNGVGITSFFVGEGIKY 713
Cdd:PRK07390 515 SRPIQLPLRFLQDLLaYDF-----YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKY 582
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
39-454 |
4.92e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 275.29 E-value: 4.92e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 39 MWAFISILLLSIVMIFSIDLSIeqidrtsiyQSLRTWTITSDLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHD 118
Cdd:MTH00211 36 KLSFFISLIPLLIFLDQGLETI---------LTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 119 QGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYW 198
Cdd:MTH00211 107 PNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 199 LTGSFEFRDLFeilknliynneVNLLFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 278
Cdd:MTH00211 187 NLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLI 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 279 RLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFL 358
Cdd:MTH00211 256 RLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFM 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 359 GSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWL-YSPIFATIAFF 437
Cdd:MTH00211 336 CSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGsYLNAWALLLTL 407
|
410
....*....|....*...
gi 114329704 438 TA-GLTAFYMFRIYLLTF 454
Cdd:MTH00211 408 LAtSLTAAYSFRLIFLSL 425
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
63-425 |
1.79e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 273.37 E-value: 1.79e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 63 IDRTSIYQSLRTWTITSDLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSS 142
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 143 NFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEF---------RDLFEILK 213
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 214 NLIYNNEVNLLFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNL 293
Cdd:MTH00032 212 YGGGAYESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 294 ISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivg 372
Cdd:MTH00032 292 ITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV--- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 114329704 373 yfpdKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTW 425
Cdd:MTH00032 369 ----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTY 417
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
5.50e-79 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 254.93 E-value: 5.50e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 141 SSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 221 VNLLFvtlcaFLLFAGPVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPYAMNLISLIG 298
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 299 IITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyfp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 114329704 376 dKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
12-460 |
7.17e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 262.60 E-value: 7.17e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 12 PLVPLPVPMLIGVGLLFFPTATKNLRRMWAFISIL-LLSIVMIFSIDLSIeQIDRTSIYQSLRTWTITSDLSFEFGYFID 90
Cdd:MTH00208 28 SNLPNISTSNASLGGNNNNNSIINYNNSNFSISLLkTLAFLSLINLLIWI-LLGCPNINISLSNWLSNTLFNFSLSFIFD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 91 pltsIMSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWF 166
Cdd:MTH00208 107 ----FYFILFFSVALFVtwsiIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWT 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 167 TRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFefrDLFEIlknlIYNNEVNLLFVTLCAFLLFAGPVAKSAQFPL 246
Cdd:MTH00208 183 TRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSW---NLNEI----LSLNNSNSFLINILLFGILLAAAGKSAQFGL 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQ 326
Cdd:MTH00208 256 HPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQ 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 327 LGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTAFLVGTLSLC 406
Cdd:MTH00208 336 LGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALM 407
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 114329704 407 GIPPLACFWSKDEIL-----NDTWLYSPIFATIAFFtagLTAFYMFRIYLLTFEGPFNF 460
Cdd:MTH00208 408 GTPFLAGFYSKDLILeaglaSISNLLSIILALIATL---LTAVYSFRIIFFCFLNNPSF 463
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
3.09e-74 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 246.98 E-value: 3.09e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 11 IPLVPLPV--PMLIGVGLLFFPTATKnLRRMWAFISILLLSIVmifSIDLSIEQIDRTSIYQSLRTWTitsdLSFEFGYF 88
Cdd:COG0651 2 SHLLILPVllPLLAAALLLLLGRRRR-LQRALSLLASLALLAL---ALALLLQVLAGGPLVYALGGWP----APFGIVLV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTR 168
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 169 PIAAGAcQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKnliynnEVNLLFVTLCAFLLFAGPVAKSAQFPLHV 248
Cdd:COG0651 154 EALRAG-LKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA------ELDPGLLLAAFALLLVGFGIKAALFPLHF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 249 WLPDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---VIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTM 324
Cdd:COG0651 227 WLPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 325 SQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRKHVPITKTAFLVG 401
Cdd:COG0651 306 SQIGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIG 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 114329704 402 TLSLCGIPPLACFWSKDEILNDTW-LYSPIFATIAFFTAGLTAFYMFRIY 450
Cdd:COG0651 377 ALALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-449 |
1.05e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 250.60 E-value: 1.05e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 29 FPTATKNLRRMWAFISILLLsivMIFsIDLSIEQIDRTSIYQSLRTWTITSDLSFEfgyfidpltsIMSILITTVGILV- 107
Cdd:MTH00066 30 FHTNVKTSVKTAFFISLIPL---MIF-INQGLESITTSFHWMNIFNFNINSSFKFD----------QYSIIFLPIALFVt 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 108 ---LIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRV 184
Cdd:MTH00066 96 wsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRV 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 185 GDFGLLLGILGLYWLTGSFEFRDLFeilknLIYNNEVNLLFvtlcAFLLFAgpVAKSAQFPLHVWLPDAMEGPTPISALI 264
Cdd:MTH00066 176 GDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPLL----GLILAA--AGKSAQFGLHPWLPAAMEGPTPVSALL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 265 HAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALF 344
Cdd:MTH00066 245 HSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFF 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 345 HLITHAYSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI---- 420
Cdd:MTH00066 325 HICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIieam 396
|
410 420 430
....*....|....*....|....*....|...
gi 114329704 421 ----LNDTWLYSPIFATiAFftaglTAFYMFRI 449
Cdd:MTH00066 397 ntsnLNSWALILTLIAT-SF-----TAVYSFRI 423
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
114-453 |
1.31e-72 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 247.77 E-value: 1.31e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 114 YMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00004 107 YMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 194 LglyWL---TGSFEFRDLFeilknliYNNEVNLLfvTLCAFLLFAgpVAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00004 187 A---WLamtLNTWEIQQLF-------SPTQTPTL--PLLGLILAA--TGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMV 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 271 AAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHA 350
Cdd:MTH00004 253 VAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHA 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 351 YSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKD---EILN----D 423
Cdd:MTH00004 333 FFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNtsylN 404
|
330 340 350
....*....|....*....|....*....|.
gi 114329704 424 TW-LYSPIFATIafftagLTAFYMFRIYLLT 453
Cdd:MTH00004 405 AWaLLLTLLATS------FTAAYSLRMILLV 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-457 |
4.34e-70 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 244.44 E-value: 4.34e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 80 DLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSY 159
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 160 LLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEiLKNLIYNNEVNLLFVtlcaFLLFAGPVA 239
Cdd:PRK12647 133 LLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHPLYLAIL----LLVLGGAFT 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGL 319
Cdd:PRK12647 208 KSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLIL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 320 AYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyfpdkSQNMVLMGGLRKHVPITKT 396
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITAA 358
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 114329704 397 AFLVGTLSLCGIPPLACFWSKDEILN-----DTWlySPIFATIAFFTAGLTAFYMFRIYLLTFEGP 457
Cdd:PRK12647 359 AALLAALSMAGLPPLFGFLAKELIYEalleaPLW--SLILTVAAVLGNALMVAVAFLVGIKPFLGK 422
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
20-449 |
2.57e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 233.57 E-value: 2.57e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 20 MLIGVGLLFFPTAT----KNLRRMWA------------FISILLLsivMIFsIDLSIEQIdrTSIYQSLRTWTITSDLSF 83
Cdd:MTH00137 11 LILIFALLIYPLLTtlspNPQKPNWAlthvktavktafFVSLLPL---FLF-LNQGAETI--ITNWNWMNTLTFDINISF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 84 EFGYFidpltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSY 159
Cdd:MTH00137 85 KFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 160 LLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILglyWL---TGSFEFRDLFEILKNLiynnevNLLFVTLCAFLLFAG 236
Cdd:MTH00137 157 LLIGWWYGRADANTAALQAVIYNRVGDIGLILAMA---WMatnLNSWEIQQIFALSKDF------DLTLPLLGLILAATG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 237 pvaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIK 316
Cdd:MTH00137 228 ---KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIK 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 317 RGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKT 396
Cdd:MTH00137 305 KIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSS 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 114329704 397 AFLVGTLSLCGIPPLACFWSKDEI---LNDTWL--YSPIFATIAfftAGLTAFYMFRI 449
Cdd:MTH00137 377 CLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIA---TSFTAVYSLRV 431
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
13-421 |
1.92e-66 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 227.55 E-value: 1.92e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 13 LVPLPVPMLIGVGLLFFPTATKNlrrmWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRTWTITSdlsfEFGYFIDPL 92
Cdd:PRK06525 5 LLTLLLPFIGALVVFFLPGRRAA----ELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVA----LFGLVIDPV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 93 TSIMSILITTVGILVLIYSDNYMS-------HDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFW 165
Cdd:PRK06525 77 SVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 166 FTrPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEF---RDLFEILKNLIYnnevnllfvtlcAFLLFAGpVAKSA 242
Cdd:PRK06525 157 QS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALsalSGLHGSLKYLVF------------LGILFAA-WGKSA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYAMnliSLIGIITVFLGATLALAQQDIKRG 318
Cdd:PRK06525 223 QLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVG---AVMAIVTLLYGFLMYLPQQDMKRL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 319 LAYSTMSQLGYMMLALGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRKHVP 392
Cdd:PRK06525 300 LAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLP 370
|
410 420
....*....|....*....|....*....
gi 114329704 393 ITKTAFLVGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK06525 371 LVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
29-456 |
3.65e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 230.12 E-value: 3.65e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 29 FPTATKNLRrMWAFISILLLSIVMIFSIDLSIeqidrTSIYQSLRTWTITSDLSFEFGYFidpltsimSILITTVGILV- 107
Cdd:MTH00108 32 YPLYVKTTI-SYAFIISLIPTMMFIHSGQEMI-----ISNWHWMTIQTLKLSLSFKLDYF--------SMIFIPVALFVt 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 108 ---LIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRV 184
Cdd:MTH00108 98 wsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 185 GDFGLLLGILglyWL---TGSFEFRDLFeilknLIYNNEVNLlfvTLCAFLLFAgpVAKSAQFPLHVWLPDAMEGPTPIS 261
Cdd:MTH00108 178 GDIGFILAMA---WFllnLNSWDLQQIF-----MLNPNNSNL---PLMGLLLAA--TGKSAQFGLHPWLPSAMEGPTPVS 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 262 ALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRA 341
Cdd:MTH00108 245 ALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 342 ALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKD--- 418
Cdd:MTH00108 325 AFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDlii 396
|
410 420 430
....*....|....*....|....*....|....*....
gi 114329704 419 EILNDTwlYSPIFA-TIAFFTAGLTAFYMFRIYLLTFEG 456
Cdd:MTH00108 397 EAANTS--YTNAWAlLITLIATSLTAAYSTRIIFFALLG 433
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
85-458 |
4.73e-66 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 234.05 E-value: 4.73e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 85 FGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIG 163
Cdd:PRK12645 72 FTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 164 FWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILkNLIYNNEvnllFVTLCAFLLFAGPVAKSAQ 243
Cdd:PRK12645 152 YWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANA-DEIQNSP----LFIPAMILILLGAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYST 323
Cdd:PRK12645 227 FPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 324 MSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyfpdkSQNMVLMGGL 387
Cdd:PRK12645 307 VSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 388 RKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILN-------------DTWLYspIFATIAFFTAGLTAFYMFRIYLLTF 454
Cdd:PRK12645 378 MTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTF 455
|
....
gi 114329704 455 EGPF 458
Cdd:PRK12645 456 FGKY 459
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
81-450 |
2.67e-65 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 231.66 E-value: 2.67e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 81 LSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYL 160
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 161 LIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIynNEVNLLFVTLcafLLFAGPVAK 240
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAMV---LVLLGAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLA 320
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 321 YSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyfpDKSQNMVLM 384
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 385 GGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILN-------------DTWLY-SPIFATIA-FFTAGLTAFYMFRI 449
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGYlFPYVATVAsVFTFVYSLRFIHGV 450
|
.
gi 114329704 450 Y 450
Cdd:TIGR00940 451 F 451
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
85-457 |
1.72e-63 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 228.54 E-value: 1.72e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 85 FGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGF 164
Cdd:PRK12648 70 LSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 165 WFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFefrDLFEIL--KNLIYNNEvnLLFVTLCAFLLfaGPVAKSA 242
Cdd:PRK12648 150 WHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSY---DLDVVLaaGDLIRAHP--LYPPALVLILL--GAFTKSA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYS 322
Cdd:PRK12648 223 QFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 323 TMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyfpdKSQNMVLMGGLRKHVPITKTAFL 399
Cdd:PRK12648 303 TISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAM 373
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114329704 400 VGTLSLCGIPPLACFWSK----DEILNDTWLYS-----PIFATIAfftAGLTAFYMFRIYLLTFEGP 457
Cdd:PRK12648 374 VAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA---GAFSVAYSLRFIHDVFFGP 437
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-418 |
2.38e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 223.17 E-value: 2.38e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 41 AFISILLLSIVMIFSIDlsieqidrTSIYQSLRTWTITSDLSFEFgyFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:PRK12649 40 AFTSFALIAQVAPEVIH--------GTIITGSISWLPSAGVEFSI--YADGLAVLIGLIASGIGVIIMSYSNGYMSHKED 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 121 YLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLT 200
Cdd:PRK12649 110 LPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVIT 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 201 GSFefrDLFEILKN--LIYNNEVNLLFVtLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 278
Cdd:PRK12649 190 GTY---DIATILQDseLIENIKGHPLFL-ITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVA 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 279 RLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYR-------AALFHLITHAY 351
Cdd:PRK12649 266 RIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHAT 345
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114329704 352 SKALLFLGSGSIIHsmEAivgyfpdKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKD 418
Cdd:PRK12649 346 FKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-417 |
5.46e-58 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 212.86 E-value: 5.46e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 80 DLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCS 158
Cdd:PRK12644 63 SLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 159 YLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDlfeilknlIYNNEVNLLFVTLCAFLLFAGPV 238
Cdd:PRK12644 143 FLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSE--------LLADPPTGPAVSVAVVLILVGAL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRG 318
Cdd:PRK12644 215 SKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLI 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 319 LAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmeaiVGyfpdkSQNMVLMGGLRKHVPITK 395
Cdd:PRK12644 295 LAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSGLGRRQPVLA 365
|
330 340
....*....|....*....|..
gi 114329704 396 TAFLVGTLSLCGIPPLACFWSK 417
Cdd:PRK12644 366 VVAALAAASMAGLPPLLGFVAK 387
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
106-478 |
4.82e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 204.22 E-value: 4.82e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 106 LVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIgFWFTRPIAAGACQKAFVTNRVG 185
Cdd:MTH00165 69 MVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 186 DFGLLLGILglyWLT--GSFEFRDLFEILKNLIYNNEVnLLFVTLCAFllfagpvAKSAQFPLHVWLPDAMEGPTPISAL 263
Cdd:MTH00165 148 DVAILLSIA---WMMnfGSWNFIFYLDFMKNSFEMLLI-GLLIMLAAM-------TKSAQIPFSSWLPAAMAAPTPVSAL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 264 IHAATMVAAGIFLVARLLPLFIvIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAAL 343
Cdd:MTH00165 217 VHSSTLVTAGVYLLIRFNNLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAF 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 344 FHLITHAYSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILND 423
Cdd:MTH00165 296 FHLLTHALFKALLFLCAGSIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEM 367
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 114329704 424 TWL-YSPIFATIAFFTA-GLTAFYMFRIYLLTFEGPFNF-CLQNYSGKKRNSLYSISL 478
Cdd:MTH00165 368 VSMsNLNFFIFFLFFFStGLTVSYSFRLIYYSMSGDFNLkSLNNLSDESKFMLKSMIL 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
8-459 |
4.83e-57 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 208.46 E-value: 4.83e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 8 SWIIPLVPLPVPMLIGVGLLFfptaTKNLRRMWAFISIL---LLSIVMIFSI-DLSIEQIDRTSIyqslrTWTITSDLSF 83
Cdd:PRK12646 2 SLVYLLIAILVIMAMILLTSK----RRALAKYAGYIALVapiISSIYFLIQIpSVAKLQYLSTSI-----PWMKTLDINL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 84 EFGyfIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLI 162
Cdd:PRK12646 73 DLR--LDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 163 GFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEiLKNLIYNNEvnlLFVTLcAFLLFAGPVAKSA 242
Cdd:PRK12646 151 SYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILG-QADHIKNHG---LFIPM-IFMFLLGAFTKSA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYS 322
Cdd:PRK12646 226 QFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 323 TMSQLGYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMG 385
Cdd:PRK12646 306 TISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILS 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 386 GLRKHVPITKTAFLVGTLSLCGIPPLACFWSKD----------EILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFE 455
Cdd:PRK12646 377 GMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFW 456
|
....
gi 114329704 456 GPFN 459
Cdd:PRK12646 457 GKYD 460
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
79-474 |
2.10e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 199.68 E-value: 2.10e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 79 SDLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCS 158
Cdd:MTH00151 42 SSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVS 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 159 YLLIGFWFTRPIAAGACQKAFvTNRVGD-FGLLLGILGLYWLTGSFEFRDLFEilknliynnevnlLFVTLCAFLLFAGp 237
Cdd:MTH00151 122 FALVIYYQNKKSLSAGMLTAL-TNRIGDvLILLSIALLVLLGHWSILSMWDFK-------------LSGWLGLLLVLAA- 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKR 317
Cdd:MTH00151 187 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKK 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 318 GLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpDKSQNMVLMGGLRKHVPITKTA 397
Cdd:MTH00151 267 IIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGC 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 398 FLVGTLSLCGIPPLACFWSKDEILnDTWLYSPI--FATIAFFTA-GLTAFYMFRIYLLTFEGPFNFCLqnYSGKKRNSLY 474
Cdd:MTH00151 339 LNISSLSLCGAPFLSGFYSKDLIL-ESSLMSPTslLMVLLMFVGvGLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-460 |
1.01e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 194.86 E-value: 1.01e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 45 ILLLSIVMIFSIDLSIEQIDRTSIYqsLRTWTITS--DLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL 122
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIV--ILEWELLSlnSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 123 RFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWF-TRPIAAGACqkAFVTNRVGDFGLLLGILglyWLT- 200
Cdd:MTH00209 84 RFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQnSKSLSAGML--TALTNRVGDALLILSIA---WMLm 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 201 -GSFefrdlfeilkNLIYNNEVNLLFVTLCAFLLFAGpVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 279
Cdd:MTH00209 159 hGNW----------NIFYLNFNSNLGSVISVLIVLAA-MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 280 LLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLG 359
Cdd:MTH00209 228 FFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFIC 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 360 SGSIIHSMEaivgyfpdKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILnDTWLYS--PIFATIAFF 437
Cdd:MTH00209 308 AGNIIHSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMF 378
|
410 420
....*....|....*....|....
gi 114329704 438 TA-GLTAFYMFRIYLLTFEGPFNF 460
Cdd:MTH00209 379 LStSLTAAYSMRLSYFSLWGPNSS 402
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
18-459 |
4.32e-52 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 188.37 E-value: 4.32e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 18 VPMLIGVGLLFFPTATKNLRRMWAFIS---ILLLSIVMIFSIDLSIEQIdrtsIYQSLRTWTITSDLSFEFGyfIDPLTS 94
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPGTGGF----QFVESYPWIPSLGISYHLG--VDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 95 IMSILITTVGILVLIYSDNYMSHDQGylRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFW--FTRPIAA 172
Cdd:COG1008 86 PLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 173 gacQKAFVTNRVGDFGLLLGILGLYWLTGSFEFrDLFEILKNLIYNNEVNLLFvtlcaFLLFAGPVAKSAQFPLHVWLPD 252
Cdd:COG1008 164 ---IKFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLF-----LAFFIAFAVKVPMFPFHTWLPD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 253 A-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----YAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQ 326
Cdd:COG1008 235 AhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 327 LGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRKHVPITKTAFLVGTL 403
Cdd:COG1008 311 MGFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAAL 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 114329704 404 SLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGPFN 459
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
26-457 |
1.23e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 189.21 E-value: 1.23e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 26 LLFFPT---ATKNLRRMWAFISILLLSIVMIFS---IDLSIEQIDRTSIYqslrtwtitsdlsfeFGYFIDPLTSIMSIL 99
Cdd:MTH00207 1 LRMFKPssiASYLLWFMSILMFPLSLYLMMCNKtilIEWEIFTISSSPIN---------------FTIILDPTGTLFSST 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 100 ITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIgFWFTRPIAAGACQKAF 179
Cdd:MTH00207 66 VLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 180 VTNRVGDFGLLlgilglywLTGSFEFRDLFEILKNLIYNNEVNllFVTLCAFLlfaGPVAKSAQFPLHVWLPDAMEGPTP 259
Cdd:MTH00207 145 LTNRIGDVMLL--------LSIGWTLNQGHWSITNMWQTDMNN--YIALSIMI---AAMTKSAQMPFSSWLPAAMAAPTP 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 260 ISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSY 339
Cdd:MTH00207 212 VSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMP 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 340 RAALFHLITHAYSKALLFLGSGSIIHSMEaivgyfpdKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDE 419
Cdd:MTH00207 292 KLALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDL 363
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 114329704 420 ILNDTwLYSP---IFATIAFFTAGLTAFYMFRIYLLTFEGP 457
Cdd:MTH00207 364 ILESS-LFYPhnsLMILMIFLATALTAAYSTRFTLAVLWSP 403
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
16-447 |
5.02e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 189.10 E-value: 5.02e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 16 LPVPMLIGVGLLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLrTWT---ITSDLSFEFGYFIDPL 92
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALTWSV-TWIpdlLGNGVDVNLALRADAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 93 TSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGfwftRPIAA 172
Cdd:PRK12650 81 SLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA----RSGSG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 173 G--ACQKAFVTNRVGDFGLLLGILGLYWLTGSfefRDLFEILKNLIYNNevNLLFVTLCAFLLFAGPVAKSAQFPLHVWL 250
Cdd:PRK12650 157 GeaGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAE--KPGLTTVVAVLIAVAAFTKSAQFPFHFWL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 251 PDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYM 330
Cdd:PRK12650 232 PEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 331 MLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyfpdKSQNMVLMGGLRKHVPITKTAFLVGTLSLCG 407
Cdd:PRK12650 312 VATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAA 382
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 114329704 408 IPPLACFWSKDEILnDTWLYSPIFAT---IAFFTAGLTAFYMF 447
Cdd:PRK12650 383 VPPLFGFVSKEGML-TAFLEAPGGNAgvvLLLVGAALGAVFTF 424
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-464 |
1.67e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 181.83 E-value: 1.67e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 18 VPMLIGVGLLFFPTATKNLRRMWAfisILLLSIVMIFSIDLSIEQIDRTSIYQSLRTWTITSDLSFEFGYF-------ID 90
Cdd:PRK08376 13 IPLFGAFSMPIVSLLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIVYVLGAESPTLTLPFGSGGFpiriiweVD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 91 PLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPI 170
Cdd:PRK08376 90 LFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 171 AAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEfrdlfeiLKNLIYNNEVNLLFVTLCAF-LLFAGPVAKSAQFPLHVW 249
Cdd:PRK08376 170 AIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALaLFIAGLAMKSGAVPVHMW 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 250 LPDAM-EGPTPISALIHAATmvAAGIFLVARLlpLFIVIPYAMNL------ISLIGIITVFLGATLALAQQDIKRGLAYS 322
Cdd:PRK08376 243 LPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINLatvgwvIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 323 TMSQLGYMMLALGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGL 387
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGL 389
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114329704 388 RKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGPFNFCLQN 464
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMN 466
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-457 |
5.07e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 180.55 E-value: 5.07e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 87 YFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 167 TRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVNL---LFVTLCAFLLFAGPV--AKS 241
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLagnPPLALGVALALALWAftIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 242 AQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFIVIPYAMNLISLIGIITVFLGATLALAQ 312
Cdd:PRK12667 238 AIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 313 QDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRK 389
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGR 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114329704 390 HVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSP-IFATIAFFTAGLTAFYMFRIYLLTFEGP 457
Cdd:PRK12667 388 KMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFyLPALVLLIASAISLVGYFRAWYSLFFGK 456
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-449 |
9.03e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 179.30 E-value: 9.03e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 10 IIPLVPLPVPmLIGVGLLFFPTATKNLRRMWAFI-SILLLSIVMIFSIDLSIEQIDRTSIYQSLRTWTITsdlsfefgYF 88
Cdd:PRK08375 4 HLLPLLVAVP-LLAAALIVLLPKRRRLRWALALLvAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGIE--------LR 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGylRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTR 168
Cdd:PRK08375 75 ADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 169 PIAAGAcQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILknliynNEVNLLFVTLcAFLLFAGpVAKSAQFPLHV 248
Cdd:PRK08375 153 RALAAA-RKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAL------AENPTVVTAF-GFVLLAL-ALKAAVFPLHT 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYST 323
Cdd:PRK08375 224 WLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYST 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 324 MSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmEAIVGyfpdkSQNMVLMGGLRKHVPITKTAFLV 400
Cdd:PRK08375 304 VSQMGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAV 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 114329704 401 GTLSLCGIPPLACFWSKDEIL---NDTWLYSPIFATIAffTAGLTAFYMFRI 449
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLA--SSLLALLYFLRI 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-449 |
4.23e-40 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 154.12 E-value: 4.23e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 10 IIPLVPLPVPMLIGVGLLFFPTATKNL-RRMWAFISILLLSIVMIFSidlsieqidrtsiyqsLRTWTITSDLSFEFGYF 88
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLDLFLPRRsRRLLAGLALLGLLLALALL----------------LLALGGGTGTAFGGMFV 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLR-FFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFT 167
Cdd:COG1007 68 VDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRD 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 168 RPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFefrDLFEILKNLIYNNEVNLLFVTLCAFLLfAGPVAKSAQFPLH 247
Cdd:COG1007 148 DRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSL---NLAGIAAALAAGGANSPLLLLGLVLVL-AGLAFKLSAVPFH 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 248 VWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTM 324
Cdd:COG1007 224 MWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 325 SQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihsmeAIVGYFPDKSQNMVLMG---GLRKHVPITKTAF 398
Cdd:COG1007 303 AHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAF-----------AVILLLSRKGGEAEEIEdlaGLARRSPLLALAM 371
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 114329704 399 LVGTLSLCGIPPLACFWSKDEIL------NDTWLyspifATIAFFTAGLTAFYMFRI 449
Cdd:COG1007 372 TIFLLSLAGIPPTAGFFGKFYVFsaaveaGLYWL-----AVIAVLNSVISAYYYLRV 423
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
83-449 |
5.25e-39 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 153.23 E-value: 5.25e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 83 FEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFfnASMLGLVTSSNFIQIYIFWELVGMCSYLLI 162
Cdd:PRK08668 61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMV 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 163 gfWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFrdlFEILKNLIynNEVNLLFVTLCAFLLFAGPVAKSA 242
Cdd:PRK08668 139 --PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF---ADISQGLI--NDTSTGFALIVFLFLLAFGVAKAG 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 243 QFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LFIVIPYAMNLISLIGIITVFLGATLAL 310
Cdd:PRK08668 212 IFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNISIIVGTLMAI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 311 AQQDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGL 387
Cdd:PRK08668 292 LQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRT---------GTTKISEMGGL 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 114329704 388 RKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDtwLYS---PIFATIAFFTAGLTAFYMFRI 449
Cdd:PRK08668 363 IEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEA--LISkgmPITAFMAFFGSIGSFLYVFRP 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-457 |
9.29e-39 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 150.36 E-value: 9.29e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 10 IIPLVPLPVPMLIGVGLLFFPTATKN--LRRMWAFISILLLSIVMIFsidlsieqidrtsIYQSLRTWTITSDLsfefgY 87
Cdd:PRK05777 8 LILLLPELILLGAAVVLLLIDAFVRRhsRRATLAVLALLLALVALLF-------------VLGAAGGGTAFGGM-----L 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 88 FIDPLTSIMSILITTVGILVLIYSDNYMShDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFT 167
Cdd:PRK05777 70 VVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 168 RPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDlfeILKNLIYNNEVNLLFVTLCAFLLfAGPVAKSAQFPLH 247
Cdd:PRK05777 149 RRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAG---IAKALADGSGNSLLLLFGLVFLL-VGLAFKLSAVPFH 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 248 VWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLpLFIVIPYAM---NLISLIGIITVFLGATLALAQQDIKRGLAYST 323
Cdd:PRK05777 225 MWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLL-VVAFGGLSEdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 324 MSQLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEAIVGYFPDKSQnmvlMGGLRKHVPITKTAFLV 400
Cdd:PRK05777 303 IAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTI 374
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114329704 401 GTLSLCGIPPLACFWSKDEIL------NDTWLyspifATIAFFTAGLTAFYMFR-IYLLTFEGP 457
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRvIKLMYFDEP 433
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
3.95e-38 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 149.08 E-value: 3.95e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 10 IIPLVPlPVPMLIGVGLLFF-PTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIdrtsiyqslrtWTITSDLSfefgyf 88
Cdd:PRK08168 5 VCALLP-AVLMSLAAGGLLLsRWLTRALWRIAQAASLAGLFLALLGLVLFATGAA-----------WPAAAWLE------ 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTR 168
Cdd:PRK08168 67 VSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 169 PIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEIlknliYNNEVNLLFVTLCAFLLFAGPVAKSAQFPLHV 248
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 249 WLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLG 328
Cdd:PRK08168 222 WLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
330 340 350
....*....|....*....|....*....|....*.
gi 114329704 329 YMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 364
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-457 |
9.96e-37 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 146.96 E-value: 9.96e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGY----LRFFayMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFF--YNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 165 WFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLfeilknliynNEVNLL-FVTLCAFLL-FAGPVAKSA 242
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM----------RAAHLSpFWASLVFLLaLFGFGAKAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 243 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIP--YAMNLISLIGIITVFLGATLALAQQDIKRGL 319
Cdd:PRK06521 226 LVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwWWGVLVLALGAISAVLGVLYALAEHDLKRLL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 320 AYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyfpdkSQNMVLMG 385
Cdd:PRK06521 305 AYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKLG 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 386 GLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL--------NDTWLYS---PIFATIAFFTAGLTAFYMFRIYLLTF 454
Cdd:PRK06521 376 GLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITF 455
|
...
gi 114329704 455 EGP 457
Cdd:PRK06521 456 LGR 458
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
18-457 |
2.03e-35 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 140.72 E-value: 2.03e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 18 VPMLIGVGLLFFPTATKNLRRMWAFIS---ILLLSIVMIFSIDLSieqidrTSIYQS--LRTWTITSDLSFEFGyfIDPL 92
Cdd:PRK05846 12 LPLIGGLLVLLTERFGARLARWIALIGtllTLLLSLVLWIGFDSS------NAGFQFveKHPWIPRFGISYHLG--VDGI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 93 TSIMSILITTVGILVLIYSDNYMSHDQGylRFFAYMSFFNASMLGLVTSSNFIQIYIFWE--LVGMcsYLLIGFW--FTR 168
Cdd:PRK05846 84 SLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVWggKNR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 169 PIAAgacQKAFVTNRVGDFGLLLGILGLYWL----TGSFEFRDLfeiLKNLIYNNEVNLLFvtLCAFLLFAgpvAKSAQF 244
Cdd:PRK05846 160 IYAA---TKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL---LNLPLPPGVQYWLF--LAFFIAFA---VKMPMF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIP-YAMNLISLIGIITVFLGATLALAQQDIKRGLAYS 322
Cdd:PRK05846 229 PLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 323 TMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRKHVPITKTAFL 399
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVLAAFFL 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 114329704 400 VGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGP 457
Cdd:PRK05846 380 FFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-454 |
2.83e-35 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 140.82 E-value: 2.83e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 81 LSFEFGYFIDPLtsIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYL 160
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 161 LIGFWFTRPIAAGACQKAFvTNRVGDFGLLLGILGlYWLTGSFEFRDLFeilknliynnevnllFVTLCAFLLFAGPVAK 240
Cdd:MTH00095 115 LVLFYNNWDSNSGAMNTAL-TNRIGDFFIFLFFSG-FIFSSYYFFSFSF---------------FSSSMILMLLLTSFTK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYaMNLISLIGIITVFLGATLALAQQDIKRGLA 320
Cdd:MTH00095 178 SAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNV-MKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 321 YSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivgyfpdkSQNMVLMGGLRKHVPITKTAFLV 400
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQLLV 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 114329704 401 GTLSLCGIPPLACFWSKDEILNDTWL--YSPIFATIAFFTAGLTAFYMFRIYLLTF 454
Cdd:MTH00095 329 TLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-449 |
2.92e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 137.26 E-value: 2.92e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 13 LVPLPVPMLIGVGLLFfpTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSiyqslrtWTITSDLSFEFGYFIDPL 92
Cdd:PRK06589 14 LSTLLVGALNLTSPFA--TKKDSFIRNFLLITISIFFFGNILLIDLLFLKGIRAQ-------FELMDFGNYSIGLHLEPL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 93 TSIMSILITTVGILVLIYSDNYMSHDQGYLRFfAYMSFFNASML---GLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRP 169
Cdd:PRK06589 85 GLIFLLLIGFLWICALLYTPKYLAINNIDSSS-RFLFFFNLTILigvLIALSSDLFTMFVCYELLTISTAFLIGHTRNNI 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 170 IAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNliynnevnllfVTLCAFLLFAGPVAKSAQFPLHVW 249
Cdd:PRK06589 164 SLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKN-----------QSIILLLMFIYGIAKTAIFPVHSW 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 250 LPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAM------NLISLIGIITVFLGATLALAQQDIKRGLAYST 323
Cdd:PRK06589 233 LPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSSLKALKTDNIKKILAYST 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 324 MSQLGYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYFPDKSQNMVLMGGLRKHVPITKTAFLV 400
Cdd:PRK06589 313 ISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFIISI 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 114329704 401 GTLSLCGIPPLACFWSKDEIL----NDTWLYSPIFATIAFF-TAGLTAFYMFRI 449
Cdd:PRK06589 384 SSLSLIGIPIFSGFISKFLILlaasEQNQPWLSIIVMLVVIaSSILSALYLLKI 437
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
18-457 |
3.08e-34 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 136.99 E-value: 3.08e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 18 VPMLIGVGLLFFPTATKNLRRMWAFIS---ILLLSIVMIFSIDLSIEQIDrtsiYQSLRTWTITSDLSFEFGyfIDPLTS 94
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPTGSGFQ----FTEDIPWIPALGISYHLG--VDGISL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 95 IMSILITTVGILVLIYSDNYMSHDQGYlrFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWfTRPIAAGA 174
Cdd:TIGR01972 81 LLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 175 CQKAFVTNRVGDFGLLLGILGLYWLTG-SFefrDLFEILKNLIYNNEVNLLFVTLcaFLLFAgpvAKSAQFPLHVWLPDA 253
Cdd:TIGR01972 158 AMKFFLYTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFLAF--FIAFA---VKVPLFPLHTWLPDA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 254 M-EGPTPISALIHAATMVAAGIFLVARLLPLFiviPYAMN----LISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLG 328
Cdd:TIGR01972 230 HvEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PDASLyfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 329 YMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRKHVPITKTAFLVGTLSL 405
Cdd:TIGR01972 307 FVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVLYERA---------HTRDIAKYGGLANKMPVLAAFFMLFAMAS 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 114329704 406 CGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGP 457
Cdd:TIGR01972 378 LGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGE 429
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-417 |
2.64e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 136.40 E-value: 2.64e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 20 MLIGVGLLFFPTAT------KNLRR----MWAFISILLLSIVMIFSIDLSIEQidrtsiyqSLRTWTITSDLSFEFgyFI 89
Cdd:PRK08667 6 FLGAILLLLAAAVIplvfrhKRKRVwqsvLWLVIAIALLLFAGSLQLFTGNPL--------DIPLWGIAPGLDITF--HI 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 90 DPLTSIMSILITTVGILVLIYSDNYMSHDQGYLR---FFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK08667 76 DRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDY 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 167 TRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFrdlfeilkNLIYNNEVNLLFVTLCAFLLFAgpvAKSAQFPL 246
Cdd:PRK08667 156 QEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL--------SPLGASAGILSLVFLLLFLGFG---IKAGIIPF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 247 HVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMS 325
Cdd:PRK08667 225 HKWLPYAHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 326 QLGYMMLALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRKHV 391
Cdd:PRK08667 305 NIGIILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLM 375
|
410 420
....*....|....*....|....*.
gi 114329704 392 PITKTAFLVGTLSLCGIPPLACFWSK 417
Cdd:PRK08667 376 PYTSALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-421 |
1.74e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 125.83 E-value: 1.74e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 19 PMLIGVGLLFFPTATKNLRRMWAFISILLLSIVMIFSIDLSIEQIDrtsiyqslrtwtitsdlSFEFGYFIDPLTSIMSI 98
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLD-----------------NFGVTLRADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 99 LITTVGILVLIYSdnyMSHDQGYLrFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKA 178
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 179 FVTNrVGDFGLLLGILGLYWLTGSFEFRDLFEILKnliynnevnllfvtLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPT 258
Cdd:PRK07234 151 FYSN-VAMLFYLIGAVLVYQANGTFAFSGLATADP--------------EAFALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 259 PISALIHAATMVAAGIFLVARLLplfIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGs 338
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 339 yraALFHLiTHAYSKALLFLGSGSIIHSmeaivgyfpDKSQNMVLMGGLRKHVPITktaflVGTLSLCGIPPLACFWSKD 418
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAGALPSR---------NFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
...
gi 114329704 419 EIL 421
Cdd:PRK07234 354 LTL 356
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-456 |
4.77e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 121.59 E-value: 4.77e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 13 LVPLPVPMLIGVGLLFFPTATKNLRrmwaFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRTWTITSDLSFefgyFIDPL 92
Cdd:PRK07691 7 ILPILIPVITAILLIFLGKRPIIQR----YVALIGSLLTLVAAIILVANVYKHGIQTLELGNWKAPFGIVF----VADMF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 93 TSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRpIAA 172
Cdd:PRK07691 79 AALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 173 GACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVNLLFVTLCAFLLFAgpvAKSAQFPLHVWLPD 252
Cdd:PRK07691 158 RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAILFLFVFA---TKAGLFPLYFWLPG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 253 AMEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGY 329
Cdd:PRK07691 235 SYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGV 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 330 MMLALGMG---SYRAALFHLITHAYSKALLFLgsgsIIHSMEAIVGYFPDKSqnmvlMGGLRKHVPITKTAFLVGTLSLC 406
Cdd:PRK07691 314 ILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLA 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 114329704 407 GIPPLACFWSKDEILNDTWLY-SPIFATIAFFTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
88-444 |
9.61e-29 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 120.81 E-value: 9.61e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 88 FIDPLTSIMSILITTVGILVLIYSDNYMSHDQ-------GYLRFFAYM-SFFNASMLGLVTSSNFIQIYIFWELVGMCSY 159
Cdd:PRK06458 66 FIDDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 160 LLIGFWFTRPiAAGACQKAFVTNRVGDFGLLLGILGLYW----LTGSFEFRDLFEIL---KNLIYNNEVNLLFVtlcafL 232
Cdd:PRK06458 146 LLVGIYRTRA-SLEAAWKYIIICSVGVAFALFGTILVYAnaatVMGDGEMAILWTELlkhASLLDPTLMKLAFV-----F 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 233 LFAGPVAKSAQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVIPYAM------------NLISLI 297
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLRYYIlidaaigsdfpgRLLLIF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 298 GIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyf 374
Cdd:PRK06458 288 GLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY------- 360
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 375 pdKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAF 444
Cdd:PRK06458 361 --GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAF 428
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
88-456 |
1.07e-27 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 117.56 E-value: 1.07e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 88 FIDPLTSIMSILITTVGILVLIYSDNYMSHDQgylrFFAYMSFFNASMLG---LVTSSNFIQIYIFWELVGMCSYLLIGF 164
Cdd:PRK08377 75 YIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP----IDKYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 165 WFTRPiAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILknliynNEVNLLFVTLCAFLLFAGPVAKSAQF 244
Cdd:PRK08377 151 NKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLA------GTIDPTVAQVGLALLIFGLAVEAELF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 245 PLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIPYAMNLISLI---GIITVFLGATLALAQQDIKRGLA 320
Cdd:PRK08377 224 PLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 321 YSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRKHVPITKTA 397
Cdd:PRK08377 303 YSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALA 373
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 114329704 398 FLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLT-AFYMFR-IYLLTFEG 456
Cdd:PRK08377 374 LTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVeAVYYFRlIHTMWFKG 434
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
24-449 |
1.23e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 113.89 E-value: 1.23e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 24 VGLLFFPTATKNLRRMWAFISILLLSIVMIFSIdlsieqidrtsiyqslrTWTITSDLSFEFGYFI-DPLTSIMSILITT 102
Cdd:TIGR01770 19 LYGLFYSRKKRNPLLLKNLSYIVLLSALVSLFL-----------------TLQYAAYLFTGFSFFIvDNFALLIKLILLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 103 VGILVLIYSDNYMSHDQ-GYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVT 181
Cdd:TIGR01770 82 STLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFIL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 182 NRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNlIYNNEVNLLFVTLcafLLFAGPVAKSAQFPLHVWLPDAMEG-PTPI 260
Cdd:TIGR01770 162 GAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSN-GMLNISLLLLGIV---LILVGLLFKLSAVPFHMWVPDVYEGaPTPV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 261 SALIHAATMVAAGIFLVaRLLPLFIVIPYAM--NLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGS 338
Cdd:TIGR01770 238 TAFFSIVPKIAIFAVFL-RLFLYILFGFSEAwqIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGT 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 339 ---YRAALFHLITHAYSKALLFlgsgSIIHSMEAIvGYFPDKSqnMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFW 415
Cdd:TIGR01770 317 legIKAVLFYIFIYALMSLGAF----GVLSLLRSY-KDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFF 389
|
410 420 430
....*....|....*....|....*....|....*....
gi 114329704 416 SKDEIL-----NDTWLyspiFATIAFFTAGLTAFYMFRI 449
Cdd:TIGR01770 390 GKFYVFfallkSGLYW----LAVIAVLTSVIGAFYYLRV 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
8-457 |
1.73e-23 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 104.65 E-value: 1.73e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 8 SWIIpLVPLPVPMLIGVGLLFFptatKNLRRMWAFISILLLSIVMIFSIDLSIEQIDRTSIYQSLRTWTITSDLSFefgy 87
Cdd:PRK12663 3 SNLL-ILPMLLPLLCGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGWLPPFGIQF---- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 88 FIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFT 167
Cdd:PRK12663 74 TGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 168 RPIAAGACQKAFVtNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVnllfVTLCAFLLFAGPVaKSAQFPLH 247
Cdd:PRK12663 154 REQLRGAIKYVVL-NLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 248 vWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPYAMN-LISLIGIITVFLGATLALAQQDIKRGLAYSTM 324
Cdd:PRK12663 228 -WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 325 SQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeAIVGYFPDKSqnmvlMGGLRKHVPITKTAFLVG 401
Cdd:PRK12663 306 SSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 114329704 402 TLSLCGIPPLACFWSKDEIL-----NDTWlyspIFATIAFFTAGLTAFYMFRIYLLTFEGP 457
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAYWGD 433
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-364 |
4.72e-23 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 103.58 E-value: 4.72e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSF--FNASMLGLvtSSNFIQIYIFWELVGMCSYLLIG--- 163
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 164 FWftRPIAAGACQKAFVTNrVGDFGLLLGILGLYWLTGSFEFRdlfeilKNLIYNNEVNL--LFVTLCAFLLFAGPVAKS 241
Cdd:PRK08601 148 GW--KVAREAAKISGMLFL-ISWLALALAIVWLFIATGEWQLT------SVLSNENLAQLgtWEKTGINLLLILAVMIPA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFIViPYAMNLISLIGIITVFLGATLALAQQDIKRGLAY 321
Cdd:PRK08601 219 AQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHD-DIAQILLLIFASISVLIGTGISLVQVDYKRQLVG 296
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 114329704 322 STMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 364
Cdd:PRK08601 297 STMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
89-417 |
1.99e-22 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 102.28 E-value: 1.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSdnymSHDQGYLRFFAYMsFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIgfWFTR 168
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAAL-LYVGSALGAVFAGDLLTLFVFWELMAFTSTFLV--WARG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 169 -PIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFrDLFEILKnliynnevnllfvTLCAFLLFAGPVAKSAQFPLH 247
Cdd:PRK12668 138 tKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLH 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYamnlislIGIITVFLGATLALAQQDIKRGLAYSTMSQL 327
Cdd:PRK12668 204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELLIY-------IGAAMAVYGVFFALLENDLRRLLSYHIVSQV 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 328 GYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyfpdKSQNMVLMGGLRKHVPITKTAFLVGTLS 404
Cdd:PRK12668 277 GYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRT---------GTEKLTELGGLYRSMPLTALFCLVGALS 347
|
330
....*....|...
gi 114329704 405 LCGIPPLACFWSK 417
Cdd:PRK12668 348 ISAFPLFSGFVSK 360
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
82-417 |
1.82e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 98.80 E-value: 1.82e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 82 SFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLL 161
Cdd:MTH00063 36 SWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 162 IGFWFTrPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFefrdlfeilknliynnevnlLFVTLCAFLLFAgpvAKS 241
Cdd:MTH00063 116 ILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGS--------------------FLCCLFFFLIVF---TKS 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAY 321
Cdd:MTH00063 172 ASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVAL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 322 STMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIihsmeaIVGYFPDKSQNMVLMGGLRKHVPITKTAFLVg 401
Cdd:MTH00063 251 STCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV- 323
|
330
....*....|....*.
gi 114329704 402 tLSLCGIPPLACFWSK 417
Cdd:MTH00063 324 -LGLSGVPFIGVFFSK 338
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-449 |
4.35e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 97.50 E-value: 4.35e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSdNYMSHDQ----GYLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGF 164
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 165 WFTRPiAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNN--EVNLLFVTLcafllfaGPVAKSA 242
Cdd:PRK12662 153 GRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRaiQIGVLFIMV-------GLFIKAA 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 243 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLP-------LFIVIPYAMNLISLIGIITVFlGATLALAQQD 314
Cdd:PRK12662 225 LFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYdvfkanfVFTTLPFNNVFMILAALAIVF-GSVLAILSKD 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 315 IKRGLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMEaivgyfpdkSQNMVLMGGLRKHV 391
Cdd:PRK12662 303 IKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSM 373
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 392 PITKTAFLVGTLSLCGIPPLACFWSKDEILnDTWLYSPIFATIAFFTAG--LTAFYMFRI 449
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYIL-DAFIKSNAWIGLVVLLVGsgLSVIYVWKI 432
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
13-451 |
1.67e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 95.55 E-value: 1.67e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 13 LVPLPVPMLIGVGLLFFPTATKNLRRMWAFIS--ILLLSIVMIFSIDLSIEQIDrtsiYQSLRTWTITSDLSFEFGyfID 90
Cdd:PRK07363 5 LLWLPILGAIIIGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQ----FQEYLPWNEPLGLSYSLG--VD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 91 PLtSIMSILITTVGILVLIYSDNYMSHDQGYlrFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPi 170
Cdd:PRK07363 79 GL-SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 171 AAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVNLLFVTLCAFLLfagpvaKSAQFPLHVWL 250
Cdd:PRK07363 155 RGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGI------KIPLVPLHTWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 251 PDAMEGPTPISALIHAATMVAAGIFLVARL-LPLFiviPYAMNLIS----LIGIITVFLGATLALAQQDIKRGLAYSTMS 325
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 326 QLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmEAIVGyfpdkSQNMVLMGGLRKHV---PITKTAFL 399
Cdd:PRK07363 306 HMGYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLV 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 114329704 400 VGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYmFRIYL 451
Cdd:PRK07363 377 LAGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-456 |
3.05e-19 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 92.20 E-value: 3.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQ----GYLrffayMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGf 164
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLFNIDWHRHAQvkanGLL-----INLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 165 wftrpiaagaCQKA----FVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVNLLFVTlcAFLLFAGPVak 240
Cdd:PRK08042 132 ----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVI--GFGLLAGII-- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 241 saqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIpyamnLISLIGIITVFLGATLALAQQD 314
Cdd:PRK08042 198 ----PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 315 IKRGLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYFPDKSQN 380
Cdd:PRK08042 269 IQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSV---------WFRTGHRD 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 381 MVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILND-----------TWLYSPIFATIAFFTAGLTAFYMFRI 449
Cdd:PRK08042 340 IEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSffklsnsgafvARLLGPLLAVGLAITGALAVMCMAKV 419
|
....*..
gi 114329704 450 YLLTFEG 456
Cdd:PRK08042 420 YGVTFLG 426
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
45-477 |
1.00e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 90.06 E-value: 1.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 45 ILLLSIVMIFSIDLSIEQIDR------------TSIYQSLRTWTITSDLSFEFGYFIDPLTSIMSILITTVGILVLIYSD 112
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIpwlyfisstslvMSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 113 NYMSHDQGYLRFFayMSFFNASMLG---LVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVtnrVGDFGL 189
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLL---MGGASS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 190 LLGILGLYWLTG-SFEFRDLFEILKNLIYNNEVNLLFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEG-PTPISALIhAA 267
Cdd:CHL00049 176 SILVYGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SV 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 268 TMVAAGIFLVARLLPlfIVIPYAMN----LISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAAL 343
Cdd:CHL00049 255 TSKVAASALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGY 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 344 FHLITHAYSKALLFLGSGSIIHSMEAIVGyfpdkSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILND 423
Cdd:CHL00049 333 ASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWC 407
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 424 TW---LYSPIFatIAFFTAGLTAFYMFRIYLLTFEG---PFNFCLQNYsgkKRNSLYSIS 477
Cdd:CHL00049 408 GWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGrnqEITPYVRNY---RRSPLRSNN 462
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
227-454 |
4.40e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 85.02 E-value: 4.40e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 227 TLCAFLLFAGPVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPYAMNLISLIGIITVFLG 305
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 306 ATLALAQQDIKRGLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIihsmEAIVGyfpdkSQNMV 382
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 114329704 383 LMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL-----NDTWL-YSPIFATIAffTAGLTAFYMFRIYLLTF 454
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWLaWALVAGGVV--TSLLTLYAVARVWTKAF 434
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
87-454 |
6.30e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 81.34 E-value: 6.30e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 87 YFIDPLtSIMSILITTVG-ILVLIYSDNYMSH-------DQGYLR-FFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMC 157
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKvFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 158 SYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILglywltgsfefrdLFEILKNLIYNNEVNLL------------F 225
Cdd:PRK08676 138 SAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIF-------------LFSLTRQALGTGTLNWTelaahasllspsV 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 226 VTLCAFLLFAGPVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPYAMNLISLIGIIT 301
Cdd:PRK08676 205 LGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFS 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 302 VFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYFPDKS 378
Cdd:PRK08676 284 IAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRF 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 114329704 379 QNmvlMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTF 454
Cdd:PRK08676 358 DR---IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-462 |
1.99e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 78.53 E-value: 1.99e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 134 SMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRdlfeiLK 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 214 NLIYNNEVNL--LFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPYA 290
Cdd:MTH00196 80 NLVLNSGQSFssVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 291 MNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFlgsgsiihsm 367
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVF---------- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 368 eAIVGYFPDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIF-ATIAFFTAGLTAFYM 446
Cdd:MTH00196 222 -SIILALNVYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLiFLLAVFCSVIAGVYY 300
|
330
....*....|....*.
gi 114329704 447 FRIYLLTFEGPFNFCL 462
Cdd:MTH00196 301 VRIVKILFFQANSFLL 316
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
18-445 |
2.13e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 79.74 E-value: 2.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 18 VPMLIGVGLLFFPTATK-NLRRMWAFI---SILLLSIVMIFSIDLSIEQIDRTSIYqslrTWTITSDLSFEFGyfIDPLt 93
Cdd:PRK06473 8 IPLLGAILIGFWPSGINgKLARSVALViasVLLLLSLVLAFQFDPGNPNQQFTEFI----PWIDSLGLSYHLG--VDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 94 SIMSILITTVGILVLIYSDNYMSHDQGYlrFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFW--FTRPIA 171
Cdd:PRK06473 81 SLPLLVLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWggQRRGYA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 172 AgacQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEILKNLIYNNEVNLLFVTLCAFLLfagpvaKSAQFPLHVWLP 251
Cdd:PRK06473 159 A---TKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLLLAPILVGFGI------KIPLVPFHTWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 252 DA-MEGPTPISALIhAATMVAAGIFLVARL-LPLFI-VIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLG 328
Cdd:PRK06473 230 DAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGLFPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 329 YMMLALGMG---SYRAALFHLITHAYSKALLFLGSGsiihsmeaiVGYFPDKSQNMVLMGGL---RKHVPITKTAFLVGT 402
Cdd:PRK06473 309 YILLAAAAAtplSILAAVFQMISHGLISALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGV 379
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 114329704 403 LSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFY 445
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVY 422
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
44-421 |
4.18e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 78.52 E-value: 4.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 44 SILLLSIVMIFSIDLSIEQiDRTSIYQSLRTWTITSDLSFEFGYFIdpltsIMSILITTVGILVLIYSDNYMSHDQGYLR 123
Cdd:MTH00199 25 STLKLSIGVLLLIGLIVEL-NSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 124 FFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSF 203
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 204 EFRDLfeilkNLIYNNEVNLLFVTLCafLLFagpvaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllP 282
Cdd:MTH00199 179 SIQGI-----NSILTGDVGKILITIS--LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------S 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 283 LFIVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSY---RAALFHLITHayskALLFLG 359
Cdd:MTH00199 239 ILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 114329704 360 SGSIIHSMEAIVGYfpdksqnMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
240-457 |
4.81e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 78.53 E-value: 4.81e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 240 KSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV----------ARLLPLFIVIpYAMNLISLiGIITVFLGATL 308
Cdd:PRK12561 198 KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmggyalirfnVQMLPDAHVY-FAPALAIL-GVVNIIYGALN 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 309 ALAQQDIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALFHLITHAYSKALLFLGSGSiihsmeaivgyFPDKSQNMVL 383
Cdd:PRK12561 269 AFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTGV-----------TYERTHTLSI 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 384 --MGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI---LNDTWLYSPIFATIAFFTAG----LTAFYMFRIYLLTF 454
Cdd:PRK12561 336 pnMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTITILLAAvgliLTPIYLLSMLRRVF 415
|
...
gi 114329704 455 EGP 457
Cdd:PRK12561 416 YGP 418
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-417 |
1.24e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 76.99 E-value: 1.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 87 YFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLrFFAYMSFfnASMLGLVTSSNFIQIYIFWELVGMCSYLLIgfwf 166
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLYVFFEIAAIVQVGLV---- 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 167 trpIAAG------ACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLfeilKNLIYNNEVNLLFVtLCAFLLFAGPVAK 240
Cdd:PRK06277 141 ---IASGteeaykAALKYMILGNVAGSILLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIY-GGLLLLIFGLLYG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 241 SAQFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPYAMNLISLIGIITVFLGATLALAQQDIK 316
Cdd:PRK06277 213 SGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYK 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 317 RGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYFPDKSQNMVLMGGLRKHVPI 393
Cdd:PRK06277 292 RLLAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPV 362
|
330 340
....*....|....*....|....
gi 114329704 394 TKTAFLVGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 363 VAFMVLCAKLAISGVPPFNGFQSK 386
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
3.52e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 67.07 E-value: 3.52e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 114329704 75 WTITSDLSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
45-417 |
8.29e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 71.62 E-value: 8.29e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 45 ILLLSIVMIFSIDLSIEQIDR------------TSIYQSLRTWTITSDLSFeFGYFI-DPLTSIMSILITTVGILVLIYS 111
Cdd:PRK02504 20 IVILTLLGVLLVDLIGGRTASrwlpylaiaglgAALVALALQWDNPNPISF-LGSFNaDNLSIAFRAIIALSTLVTLLMS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 112 DNYMshDQGYLRFFAYMSFFNASMLG---LVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFG 188
Cdd:PRK02504 99 WRYV--EQSGTPLGEFAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAI 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 189 LLLGILGLYWLTGSFEfrDLFEILKNLIynNEVNLLFVTLCAFLLfAGPVAKSAQFPLHVWLPDAMEG-PTPISALIHAA 267
Cdd:PRK02504 177 FLYGSSLLYGLSGGST--QLSAIALALI--TSPSLGLALALVFVI-AGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 268 TMvAAGIFLVARLLPL-FIVIPYAMNLI-SLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGS---YRAA 342
Cdd:PRK02504 252 SK-AAGFALAIRLLVTaFPSFDEQWKLLfTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASM 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 343 LFHLITH------AYSKALLF-LGSGSiihsmEAIVGYfpdksqnmvlmGGLRKHVPITKTAFLVGTLSLCGIPPLACFW 415
Cdd:PRK02504 331 VFYLLAYlfmnlgAFACVILFsLRTGT-----DQISDY-----------AGLYQKDPLLTLGLSLCLLSLGGIPPLAGFF 394
|
..
gi 114329704 416 SK 417
Cdd:PRK02504 395 GK 396
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
223-421 |
8.18e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 65.26 E-value: 8.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 223 LLFVtlcAFLLfagpvaKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF------IVIPYAMNLIS 295
Cdd:PRK12666 215 LLLV---VFLI------KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 296 LIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFL-----------GSG 361
Cdd:PRK12666 284 PGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAAD 363
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 362 SIIHSMEAivgYFPDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK12666 364 RLAVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-460 |
1.49e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 61.41 E-value: 1.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfivipyAMNLISLIGIITVFLGATLALAQQDIKRG 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 319 LAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEAIVGYFPDKSQNMVLMGG------------ 386
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 387 LRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDT----WLYS-PIFATIAFFT---AGLTAFYMFRIYLLTFegpF 458
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYYLVALFAiicTCISAFYYIRIVATIY---F 539
|
..
gi 114329704 459 NF 460
Cdd:MTH00198 540 NF 541
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
30-460 |
5.25e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 56.08 E-value: 5.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 30 PTATKNLRRMWAFISiLLLSIVMIFSID-----LSIEQIDRTSIYQSLRTWTITSDLSFEFG----YFIdpltsIMSILI 100
Cdd:MTH00226 41 TSSLKRIALFWSFIS-LISTIILWLSLDqeggfTPLMDIDWIEGPEKIIPIIMGGPLVFAVDgisiYFI-----ILTGFI 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 101 TTVGILVLIYSDNYMSHDqgylrFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQKAFV 180
Cdd:MTH00226 115 VPCSILISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 181 TNRVGDFGLLLGILGLYWLTGSFEFRDLFEIlKNLIYNNEVNLLFVTlcaflLFAGPVAKSAQFPLHVWLPDA-MEGPTP 259
Cdd:MTH00226 190 YTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVA 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 260 ISALIHAATMVAAGIFLVARLLPLFIVipYAMNL---ISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLAL-- 334
Cdd:MTH00226 264 GSVLLAGILLKLGGYGLVRLSWPILPL--GAQNLapaVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvt 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 335 -GMGSYRAALFHLITHAYSKALLFLgsgsiihsmeaIVGYFPDKSQNMVL--MGGLRKHVPITKTAFLVGTLSLCGIPPL 411
Cdd:MTH00226 342 hDIIGLTGSIFIMLAHGIVSSLLFI-----------LVTILYDRHHTRLIkyYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 114329704 412 ACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIY-LLTFEGPFNF 460
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFAnRVTFGAPGNL 460
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-478 |
6.16e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 55.28 E-value: 6.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 222 NLLFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpyamNLISLIGIIT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLA----YLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 302 VFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYFPDKSQNM 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 382 VLMGGLrkhvpitktaflvgtLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTA--FYMFRIYLLTFEGPFN 459
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSSSKS 299
|
250
....*....|....*....
gi 114329704 460 FCLqnysgKKRNSLYSISL 478
Cdd:MTH00144 300 KKS-----NSSKVLNSSII 313
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
244-459 |
8.13e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 55.48 E-value: 8.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 244 FPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLPLFIVIpYAMNLISLiGIITVFLGATLALAQQ 313
Cdd:PRK02546 230 VPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPDAHAQ-FAPLLIVL-GVVNIIYAALTSFAQR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 314 DIKRGLAYSTMSQLGYMMlaLGMGSYRA-----ALFHLITHAYSKALLFLgsgsiihsmeaIVGYFPDKSQNMVL--MGG 386
Cdd:PRK02546 302 NLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF-----------LVGATYDRTHTLMLdeMGG 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 387 LRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEI---LNDTWLYSPIFATIAFFTAG----LTAFYMFRIYLLTFEGPFN 459
Cdd:PRK02546 369 VGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAvgviLTPIYLLSMLREIFFGPEN 448
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
75-409 |
1.56e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 54.68 E-value: 1.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 75 WTITSDLSFEFGYFIDPLTSI------MSILITTVGILVLIYSDNYMshdqgYLRFFAYMSFFNASMLGLVTSSNFIQIY 148
Cdd:MTH00204 64 WIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLFY 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 149 IFWELVGMCSYLLIGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEIlkNLIYNNEvnlLFVTL 228
Cdd:MTH00204 139 ILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI--KLPLSIQ---KWLLV 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 229 CAFLLFAgpvAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-YAMNLISLIGIITVFLGA 306
Cdd:MTH00204 214 GFFLSLA---VKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYGS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 307 TLALAQQDIKRGLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYFPDKSQNMVL 383
Cdd:MTH00204 291 LTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRLIKY 361
|
330 340
....*....|....*....|....*.
gi 114329704 384 MGGLRKHVPITKTAFLVGTLSLCGIP 409
Cdd:MTH00204 362 YRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-363 |
2.27e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 54.03 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 94 SIMSILITTVGILVLIYSDNYmSHDQGYLRffAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGfwftrpIAAG 173
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIA------LTKK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 174 ACQKAFVTNRVGDFGLLLG---ILGLYWLTGSFEFRDLFEIlknliynneVNLLFVTLcafllfaGPVAKSAQFPLHV-- 248
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLIlagFAWAFIISGTTNFSYLPSP---------VPLILASF-------GFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYAM--NLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQ 326
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYfgLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 114329704 327 LGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSI 363
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
85-457 |
4.30e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 53.02 E-value: 4.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 85 FGYFIDPLTSIMSILITTVGILVLIYSDNYMsHDQGYLRFFAYMSFFNASMLGLV---TSSNFIQIYIFWELVGMCSYLL 161
Cdd:MTH00206 53 LYLSYDPLSSPLVILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 162 IGFWFTRPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFrDLFEILKNLIYNNEVNLLFVTLcAFLlfagpvAKS 241
Cdd:MTH00206 132 ITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-AFL------VKL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 242 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVA---RLLPLFIVIPYAMNLISLI----GIITVFLGATLALAQQ 313
Cdd:MTH00206 204 PLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFfiilGLWGSIMTSSICLRQT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 314 DIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmeaiVGYFPDKSQNMVLMGGLRK 389
Cdd:MTH00206 277 DLKSLIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQM 346
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 114329704 390 HVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGP 457
Cdd:MTH00206 347 ILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGK 414
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
139-447 |
5.70e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 52.28 E-value: 5.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 139 VTSSNFIQIYIFWELVGMCSYLLIGFWFTrPIAAGACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEilknliyn 218
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEMLG-------- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 219 nevnllfvTLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagiFLVARLLPLFIV---IPYAMNLIS 295
Cdd:MTH00200 92 --------PLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLI----------LSTWQKLAPFALliqLAPALNSNI 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 296 L--IGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmeaivgY 373
Cdd:MTH00200 154 LllLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------L 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 114329704 374 FPDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMF 447
Cdd:MTH00200 220 NLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFY 293
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
43-444 |
6.85e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 52.44 E-value: 6.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 43 ISILLLS-IVMIFSIDLSIEQIDRTSIYQSLRTWTITSDLS-FEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:MTH00014 9 ISLLLLPlIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSmFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 121 YLRFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGAcqkafvtnrvgdfgllLGILGLYWLT 200
Cdd:MTH00014 89 PKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQA----------------SFYLMIYTVT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 201 GSFEFrdLFEILKNLIYNNEVNLL----------FVTLCAFLLFAGPVAKSAQFPLHVWLPDA-MEGPTpisalihAATM 269
Cdd:MTH00014 153 ASLPL--LMSILLIFYTNNSLSMLmssmeppsiyLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSM 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 270 VAAGIFL------VARLLPLFIVIPYAM-NLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGS---Y 339
Cdd:MTH00014 224 ILAGILLklggygLLRMSSLFMHINKSLsAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgW 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 340 RAALFHLITHAYSKALLFLGSGSIihsmeaivgYFPDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSK-- 417
Cdd:MTH00014 304 QGALAMMIAHGLCSSALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEim 374
|
410 420
....*....|....*....|....*....
gi 114329704 418 --DEILNDTWLYSPIFATIAFFTAGLTAF 444
Cdd:MTH00014 375 llTSILSSSLSTAILLAITSFLAAAYSLF 403
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
245-453 |
1.00e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 51.36 E-value: 1.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 245 PLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPlfivipyaMNLISLIGIITVFLGATLALAQQDIKRGLAY 321
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLN--------PTLLLTLAILSTLIGGWGGLNQTQLRKIMAF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 322 STMSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMeaivgyfpdKSQNMVLMGGLRKHVPITKTAFLVG 401
Cdd:MTH00112 182 SSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTT---------STKTLKDMMTSWTKSPTLNTTLMLT 247
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 114329704 402 TLSLCGIPPLACFWSKDEILND-TWLYSPIFATIAFFTAGLT-AFYMFRIYLLT 453
Cdd:MTH00112 248 LLSLAGLPPLTGFMPKWLILQElTKQNMTPTATIMAMLSLLSlFFYLRLTYIST 301
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
38-332 |
1.05e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 48.62 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 38 RMWAFISILLLSIVMIFSIDLsieqIDRTSIYQSLRTWTitSDLSFEfgYFIDPLTSIMSILITTVGILVLIYSDN---- 113
Cdd:PRK06591 32 RIITRICILSSLLVSIYGYSI----IQNTELSYTMGGWT--SKIGIE--YRLNSLNQAIIVYLNLVLLFFLVFCHKitnq 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 114 ----YMSHDQGYLrFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGACQkAFVTNRVGDFGL 189
Cdd:PRK06591 104 tilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFD-YLIMGSIGATLI 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 190 LLGILGLYWLTGSFEFRDLFEILKnliynNEVNLLFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATM 269
Cdd:PRK06591 182 LIAIGFLLSITGSLNMTDIAAYLQ-----EHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGIS 256
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 114329704 270 VAAGIFLVARLlpLFIVIPYAM------NLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMML 332
Cdd:PRK06591 257 TIIGIYIIYKF--TYIIIGYETiktaitNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFL 323
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-430 |
4.39e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 46.65 E-value: 4.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 221 VNLLFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipYAMNLISLIGII 300
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 301 TVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSMEAIvgyfp 375
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 114329704 376 dksqNMVLMGGLRKhVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPI 430
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
228-457 |
4.54e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 46.49 E-value: 4.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 228 LCAFLLfagpvaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPYAMNLISLIGIItvf 303
Cdd:MTH00127 201 LLAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILALWGII--- 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 304 LGATLALAQQDIKRGLAYSTMSQLGYM---MLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAIVGYFPDKSQN 380
Cdd:MTH00127 272 MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALFC---------LANTNYERTHSRT 342
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 114329704 381 MVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGP 457
Cdd:MTH00127 343 MLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGP 419
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-478 |
5.27e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 45.82 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 222 NLLFVTLCAFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPYAMNLISLI--GI 299
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 300 ITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYFPDKSQ 379
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 380 NMVLmgglrkhvpitktaFLVGTLSLCGIPPLACFWSKDEILND-TWLYSPIFATIAFFTAGLTAFYMFRIYLLTFEGPF 458
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILTSlLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSN 290
|
250 260
....*....|....*....|
gi 114329704 459 NFCLQNYSGKKRNSLYSISL 478
Cdd:MTH00197 291 WMINFLMKINLLYSGLFILL 310
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
95-359 |
1.23e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 45.43 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 95 IMSILITTVGILVLIYSDNYMSHDqgylrFFAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAAGA 174
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 175 CQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRdlfeILKNLIYNNEVNlLFVTLCAFLLFAgpvAKSAQFPLHVWLPDA- 253
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQ----ALCCLKIEKELQ-YFIFLGFFLSLA---IKIPKIPFHIWLPQAh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 254 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPYAMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMML 332
Cdd:MTH00217 234 VEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTL 313
|
250 260 270
....*....|....*....|....*....|
gi 114329704 333 AL---GMGSYRAALFHLITHAYSKALLFLG 359
Cdd:MTH00217 314 GIfshTIQGLVAAIFLMLAHGLVSSALFIA 343
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-457 |
2.08e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 44.52 E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 88 FIDPLTSIMSILITTVGILVLIYSDNYMS-----HDQGYLrffAYMSFFNASMLGLVTSSNFIQIYIFWELVGMCSYLLI 162
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYI---SMLIILQLTLILAFSATELILFYIFFEATLIPTLIII 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 163 GFWF--TRPIAAGAcQKAFVTnRVGDFGLLLGILGLYWLTGSFEFrDLFEILKNLIYNNEVNLLFVTLC--AFLLfagpv 238
Cdd:MTH00068 134 TRWGnqEERLNAGT-YFLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLACllAFMV----- 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 239 aKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL---------VARLL-PLFIVIPYAMNLISLIGIItvfLGAT 307
Cdd:MTH00068 206 -KMPLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygilrISILLtPLSKELSYPFIILALWGVL---MTSL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 308 LALAQQDIKRGLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLgsgsiihsmeAIVGYFPDKSQNMVL 383
Cdd:MTH00068 275 ICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----------ANTNYERTHSRTLLL 344
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 114329704 384 MGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIfaTIAFFTAGL--TAFYMFRIYLLTFEGP 457
Cdd:MTH00068 345 LRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNW--TILITGLGTliTAAYTLYMFLMTQRGP 418
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
199-361 |
2.78e-04 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 44.17 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 199 LTGSFEFRDLFEILKNLIYNNEVNLLFVtLCAFLLFAgpvAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLV 277
Cdd:CHL00011 187 LYGSNEPTLNFETLANQSYPVALEILFY-IGFLIAYA---VKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLK 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 278 A----------RLLP--LFIVIPYAMnlisLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMlaLGMGSY-----R 340
Cdd:CHL00011 256 MgayglirinmELLPhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglN 329
|
170 180
....*....|....*....|.
gi 114329704 341 AALFHLITHAYSKALLFLGSG 361
Cdd:CHL00011 330 GAILQIISHGFIGAALFFLAG 350
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
245-448 |
5.58e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 42.99 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 245 PLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLfivipyamNLISLIGIITVFLGATLALAQQDIKRGL 319
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNS--------NLLIIMGLLSTLIGGWGGLNQTQLRKIM 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 320 AYSTMSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgSIIHSMeaivgyfpdkSQNMVLMGGLRKHVPITKTAFL 399
Cdd:MTH00070 180 AYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLN----------STNINKLSSSWSKNPTLTSMMM 245
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 114329704 400 VGTLSLCGIPPLACFWSKDEILND-TWLYSPIFATIAFFTAGLTAFYMFR 448
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKWLILQElTKQNLTTLATLMALSALLSLFFYLR 295
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
198-480 |
1.18e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 41.84 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 198 WLTGSFEFrdlfeilknLIYNNEVNLLFVTLCAFLlfagpvaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLV 277
Cdd:MTH00041 79 WLSGSWSI---------NGPLNTLSSIIITLALAL-------KLGLAPCHFWFPDVLQGLPFLQGLI---------IATW 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 278 ARLLPLFIVIPYA----MNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSK 353
Cdd:MTH00041 134 QKIAPLILLISISnllnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINT 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 354 ALLFLGSGSIIHSMEAIvgyfpdksqnmvlmGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNdTWLYSPIFAT 433
Cdd:MTH00041 214 SIFLIGNNFSLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLY-CLIQNNSILI 278
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 434 IAFFTAG--LTAFYMFRIYL-----------LTFEGPFNFCLQNYSGKKRNSLYSISLWG 480
Cdd:MTH00041 279 SIILIIGslLSLFFYLRISFntsltlfpqhsISLFSWRNSGNITVYGVILSILSSISILG 338
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
208-479 |
3.72e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.19 E-value: 3.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 208 LFEILKNLIYNNEVNLLFVTLCAFLLFAgpvaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVI 287
Cdd:MTH00160 72 LFSIILNMLNLMLFNNISSMLINSSLLL----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLILLS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 288 PY-AMNLISLIGIITVFLGATLALAQQDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLIthaYSKALLFLgsgsiihs 366
Cdd:MTH00160 139 YLiNNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI-------- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 367 meaIVGYFPDKSQNMVLMGGLRKHVPITKTAFLVGTLSLCGIPPLACFWSKDEILND-TWLYSPIFATIAFFTAGLTAFY 445
Cdd:MTH00160 208 ---ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLlISNNMFFLLFILIMSSLITLYF 284
|
250 260 270
....*....|....*....|....*....|....
gi 114329704 446 MFRIYLLTFEGPFNFCLQNYSGKKRNSLYSISLW 479
Cdd:MTH00160 285 YLRISYSSLMLNYNKNKWNLKKKKNKFSLILNFL 318
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
230-447 |
5.49e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 39.76 E-value: 5.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 230 AFLLFAGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipYAMNLISLIGIITVFLGATLA 309
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 114329704 310 LAQQDIKRGLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEAIVGYFPDKSQNMvlMGGLR 388
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTKF--NSKIS 230
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 114329704 389 KHVPITKTAFLVGTLSLCGIPPLACFWSKDEILNDTWLYSPIFATIAFFTAGLTAFYMF 447
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYY 289
|
|
| |
