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Conserved domains on  [gi|51873053|ref|NP_001004019|]
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fibulin-2 isoform a precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
430-490 1.63e-09

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


:

Pssm-ID: 237984  Cd Length: 70  Bit Score: 55.16  E-value: 1.63e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51873053  430 PRSSPEGSTKD-LIETCCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCCVSYLQEKSCM 490
Cdd:cd00017    1 KNSEKAAQYKDkELRKCCLDGMRENPMGQTCEERAAYITDGKECRKAFLECCVYAEELRDEE 62
EGF_CA pfam07645
Calcium-binding EGF domain;
1072-1106 2.55e-07

Calcium-binding EGF domain;


:

Pssm-ID: 429571  Cd Length: 32  Bit Score: 48.00  E-value: 2.55e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 51873053   1072 DVDECALGTHNCSEAETCHNIQGSFRCLrfeCPPN 1106
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR---CPDG 32
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
515-563 3.34e-07

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


:

Pssm-ID: 237984  Cd Length: 70  Bit Score: 48.61  E-value: 3.34e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 51873053  515 YKQCCDCCGLGLRVRAEGQSCESNP---NLGYPCNHVMLSCCEGEEPLIVPE 563
Cdd:cd00017   11 DKELRKCCLDGMRENPMGQTCEERAayiTDGKECRKAFLECCVYAEELRDEE 62
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
616-644 9.98e-07

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


:

Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 46.08  E-value: 9.98e-07
                           10        20
                   ....*....|....*....|....*....
gi 51873053    616 CQHLCINTVGSYHCACFPGFSLQDDGRTC 644
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
905-947 1.37e-06

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 46.09  E-value: 1.37e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873053     905 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQRdafGRGCI 947
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYTD---GRNCE 39
EGF_CA pfam07645
Calcium-binding EGF domain;
811-846 1.67e-06

Calcium-binding EGF domain;


:

Pssm-ID: 429571  Cd Length: 32  Bit Score: 45.69  E-value: 1.67e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873053    811 DVDECAMGTHTCQPGFLCQNTKGSFYCqarqRCMDG 846
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
857-904 5.95e-06

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 44.16  E-value: 5.95e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 51873053     857 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYHasdDGTKCV 904
Cdd:smart00179    1 DIDECASGN-PCQNGGTCVNTVGSYRCE-----CPPGYT---DGRNCE 39
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
960-988 4.86e-05

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


:

Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 41.46  E-value: 4.86e-05
                           10        20
                   ....*....|....*....|....*....
gi 51873053    960 CQHTCENTLGSYRCSCASGFLLAADGKRC 988
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
1011-1032 7.18e-05

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


:

Pssm-ID: 463661  Cd Length: 22  Bit Score: 40.86  E-value: 7.18e-05
                           10        20
                   ....*....|....*....|..
gi 51873053   1011 QCYCRQGYQLAEDGHTCTDIDE 1032
Cdd:pfam12662    1 TCSCPPGYQLDPDGRTCVDIDE 22
EGF_CA pfam07645
Calcium-binding EGF domain;
766-801 1.38e-04

Calcium-binding EGF domain;


:

Pssm-ID: 429571  Cd Length: 32  Bit Score: 40.30  E-value: 1.38e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873053    766 DINECVTDLHTCSRGEHCVNTLGSFHCykalTCEPG 801
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
685-717 1.41e-03

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


:

Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 37.22  E-value: 1.41e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 51873053    685 DNGPCKQVCSTVGGSAICSCFPGYAIMADGVSC 717
Cdd:pfam14670    4 NNGGCSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA pfam07645
Calcium-binding EGF domain;
719-746 2.51e-03

Calcium-binding EGF domain;


:

Pssm-ID: 429571  Cd Length: 32  Bit Score: 36.45  E-value: 2.51e-03
                           10        20
                   ....*....|....*....|....*...
gi 51873053    719 DQDECLMGAHDCSRRQFCVNTLGSFYCV 746
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR 28
EGF_CA smart00179
Calcium-binding EGF-like domain;
1029-1071 2.72e-03

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 36.84  E-value: 2.72e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873053    1029 DIDECAQGAGILCTFRCLNVPGSYQCACPEqGYTmtaNGRSCK 1071
Cdd:smart00179    1 DIDECASGNPCQNGGTCVNTVGSYRCECPP-GYT---DGRNCE 39
 
Name Accession Description Interval E-value
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
430-490 1.63e-09

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


Pssm-ID: 237984  Cd Length: 70  Bit Score: 55.16  E-value: 1.63e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51873053  430 PRSSPEGSTKD-LIETCCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCCVSYLQEKSCM 490
Cdd:cd00017    1 KNSEKAAQYKDkELRKCCLDGMRENPMGQTCEERAAYITDGKECRKAFLECCVYAEELRDEE 62
EGF_CA pfam07645
Calcium-binding EGF domain;
1072-1106 2.55e-07

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 48.00  E-value: 2.55e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 51873053   1072 DVDECALGTHNCSEAETCHNIQGSFRCLrfeCPPN 1106
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR---CPDG 32
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
515-563 3.34e-07

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


Pssm-ID: 237984  Cd Length: 70  Bit Score: 48.61  E-value: 3.34e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 51873053  515 YKQCCDCCGLGLRVRAEGQSCESNP---NLGYPCNHVMLSCCEGEEPLIVPE 563
Cdd:cd00017   11 DKELRKCCLDGMRENPMGQTCEERAayiTDGKECRKAFLECCVYAEELRDEE 62
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
616-644 9.98e-07

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 46.08  E-value: 9.98e-07
                           10        20
                   ....*....|....*....|....*....
gi 51873053    616 CQHLCINTVGSYHCACFPGFSLQDDGRTC 644
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
905-947 1.37e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 46.09  E-value: 1.37e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873053     905 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQRdafGRGCI 947
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYTD---GRNCE 39
EGF_CA pfam07645
Calcium-binding EGF domain;
811-846 1.67e-06

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 45.69  E-value: 1.67e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873053    811 DVDECAMGTHTCQPGFLCQNTKGSFYCqarqRCMDG 846
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
905-938 5.92e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.16  E-value: 5.92e-06
                         10        20        30
                 ....*....|....*....|....*....|....
gi 51873053  905 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQ 938
Cdd:cd00054    1 DIDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT 33
EGF_CA smart00179
Calcium-binding EGF-like domain;
857-904 5.95e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 44.16  E-value: 5.95e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 51873053     857 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYHasdDGTKCV 904
Cdd:smart00179    1 DIDECASGN-PCQNGGTCVNTVGSYRCE-----CPPGYT---DGRNCE 39
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
960-988 4.86e-05

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 41.46  E-value: 4.86e-05
                           10        20
                   ....*....|....*....|....*....
gi 51873053    960 CQHTCENTLGSYRCSCASGFLLAADGKRC 988
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA pfam07645
Calcium-binding EGF domain;
905-936 6.17e-05

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 41.07  E-value: 6.17e-05
                           10        20        30
                   ....*....|....*....|....*....|..
gi 51873053    905 DVNECETGVHRCGEGQVCHNLPGSYRCDCKAG 936
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECRCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
948-989 6.47e-05

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.08  E-value: 6.47e-05
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 51873053     948 DVNECwaSPGRLCQH--TCENTLGSYRCSCASGFLlaaDGKRCE 989
Cdd:smart00179    1 DIDEC--ASGNPCQNggTCVNTVGSYRCECPPGYT---DGRNCE 39
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
1011-1032 7.18e-05

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


Pssm-ID: 463661  Cd Length: 22  Bit Score: 40.86  E-value: 7.18e-05
                           10        20
                   ....*....|....*....|..
gi 51873053   1011 QCYCRQGYQLAEDGHTCTDIDE 1032
Cdd:pfam12662    1 TCSCPPGYQLDPDGRTCVDIDE 22
EGF_CA pfam07645
Calcium-binding EGF domain;
766-801 1.38e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 40.30  E-value: 1.38e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873053    766 DINECVTDLHTCSRGEHCVNTLGSFHCykalTCEPG 801
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
857-895 2.11e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 39.93  E-value: 2.11e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 51873053  857 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYH 895
Cdd:cd00054    1 DIDECASGN-PCQNGGTCVNTVGSYRCS-----CPPGYT 33
EGF_CA smart00179
Calcium-binding EGF-like domain;
766-802 2.54e-04

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 39.54  E-value: 2.54e-04
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 51873053     766 DINECVTDlHTCSRGEHCVNTLGSFHCykalTCEPGY 802
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRC----ECPPGY 32
ANATO smart00104
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
445-480 3.41e-04

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 197517  Cd Length: 35  Bit Score: 39.24  E-value: 3.41e-04
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 51873053     445 CCAAGQQWAIDNDECLEIPESGTEDNvCRTAQRHCC 480
Cdd:smart00104    1 CCADGMRLAPMGETCEERAARINSGD-CRKAFLQCC 35
EGF_CA pfam07645
Calcium-binding EGF domain;
857-884 5.79e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 38.37  E-value: 5.79e-04
                           10        20
                   ....*....|....*....|....*...
gi 51873053    857 DINECTSLSEPCRPGFSCINTVGSYTCQ 884
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR 28
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
948-989 1.00e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 38.00  E-value: 1.00e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 51873053  948 DVNECwaSPGRLCQH--TCENTLGSYRCSCASGFLlaadGKRCE 989
Cdd:cd00054    1 DIDEC--ASGNPCQNggTCVNTVGSYRCSCPPGYT----GRNCE 38
EGF_CA smart00179
Calcium-binding EGF-like domain;
604-644 1.09e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.09e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873053     604 DQDECLLlpGELCQH--LCINTVGSYHCACFPGFSlqdDGRTC 644
Cdd:smart00179    1 DIDECAS--GNPCQNggTCVNTVGSYRCECPPGYT---DGRNC 38
EGF_CA smart00179
Calcium-binding EGF-like domain;
811-847 1.25e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.25e-03
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 51873053     811 DVDECAMGtHTCQPGFLCQNTKGSFYCQarqrCMDGF 847
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCE----CPPGY 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
1072-1107 1.34e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.34e-03
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 51873053    1072 DVDECALGtHNCSEAETCHNIQGSFRClrfECPPNY 1107
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRC---ECPPGY 32
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
685-717 1.41e-03

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 37.22  E-value: 1.41e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 51873053    685 DNGPCKQVCSTVGGSAICSCFPGYAIMADGVSC 717
Cdd:pfam14670    4 NNGGCSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
766-805 2.22e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 36.85  E-value: 2.22e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 51873053  766 DINECvTDLHTCSRGEHCVNTLGSFHCykalTCEPGYALK 805
Cdd:cd00054    1 DIDEC-ASGNPCQNGGTCVNTVGSYRC----SCPPGYTGR 35
EGF_CA pfam07645
Calcium-binding EGF domain;
719-746 2.51e-03

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 36.45  E-value: 2.51e-03
                           10        20
                   ....*....|....*....|....*...
gi 51873053    719 DQDECLMGAHDCSRRQFCVNTLGSFYCV 746
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR 28
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
804-842 2.56e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 40.83  E-value: 2.56e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 51873053  804 LKDGECEDVDECAMGTHTCQPGflCQNTKGSFYCQARQR 842
Cdd:cd01475  179 FQGKICVVPDLCATLSHVCQQV--CISTPGSYLCACTEG 215
EGF_CA smart00179
Calcium-binding EGF-like domain;
1029-1071 2.72e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 36.84  E-value: 2.72e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873053    1029 DIDECAQGAGILCTFRCLNVPGSYQCACPEqGYTmtaNGRSCK 1071
Cdd:smart00179    1 DIDECASGNPCQNGGTCVNTVGSYRCECPP-GYT---DGRNCE 39
ANATO smart00104
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
521-553 2.77e-03

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 197517  Cd Length: 35  Bit Score: 36.54  E-value: 2.77e-03
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 51873053     521 CCGLGLRVRAEGQSCESNPNLGY--PCNHVMLSCC 553
Cdd:smart00104    1 CCADGMRLAPMGETCEERAARINsgDCRKAFLQCC 35
ANATO pfam01821
Anaphylotoxin-like domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated ...
445-480 2.81e-03

Anaphylotoxin-like domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 460347  Cd Length: 36  Bit Score: 36.48  E-value: 2.81e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873053    445 CCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCC 480
Cdd:pfam01821    1 CCLDGMKRNPMGRSCEQRAARIKEGPRCRKAFLQCC 36
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
604-644 6.37e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 35.69  E-value: 6.37e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 51873053  604 DQDECLLLPGELCQHLCINTVGSYHCACFPGFSlqddGRTC 644
Cdd:cd00054    1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT----GRNC 37
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
717-759 7.06e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 39.68  E-value: 7.06e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 51873053  717 CEDQDECLMGAHDCsrRQFCVNTLGSFYCVnhtvlCADGYILN 759
Cdd:cd01475  184 CVVPDLCATLSHVC--QQVCISTPGSYLCA-----CTEGYALL 219
 
Name Accession Description Interval E-value
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
430-490 1.63e-09

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


Pssm-ID: 237984  Cd Length: 70  Bit Score: 55.16  E-value: 1.63e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51873053  430 PRSSPEGSTKD-LIETCCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCCVSYLQEKSCM 490
Cdd:cd00017    1 KNSEKAAQYKDkELRKCCLDGMRENPMGQTCEERAAYITDGKECRKAFLECCVYAEELRDEE 62
EGF_CA pfam07645
Calcium-binding EGF domain;
1072-1106 2.55e-07

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 48.00  E-value: 2.55e-07
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 51873053   1072 DVDECALGTHNCSEAETCHNIQGSFRCLrfeCPPN 1106
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR---CPDG 32
ANATO cd00017
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
515-563 3.34e-07

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to repeats in fibulins.


Pssm-ID: 237984  Cd Length: 70  Bit Score: 48.61  E-value: 3.34e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 51873053  515 YKQCCDCCGLGLRVRAEGQSCESNP---NLGYPCNHVMLSCCEGEEPLIVPE 563
Cdd:cd00017   11 DKELRKCCLDGMRENPMGQTCEERAayiTDGKECRKAFLECCVYAEELRDEE 62
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
616-644 9.98e-07

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 46.08  E-value: 9.98e-07
                           10        20
                   ....*....|....*....|....*....
gi 51873053    616 CQHLCINTVGSYHCACFPGFSLQDDGRTC 644
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA smart00179
Calcium-binding EGF-like domain;
905-947 1.37e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 46.09  E-value: 1.37e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873053     905 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQRdafGRGCI 947
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYTD---GRNCE 39
EGF_CA pfam07645
Calcium-binding EGF domain;
811-846 1.67e-06

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 45.69  E-value: 1.67e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873053    811 DVDECAMGTHTCQPGFLCQNTKGSFYCqarqRCMDG 846
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
905-938 5.92e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.16  E-value: 5.92e-06
                         10        20        30
                 ....*....|....*....|....*....|....
gi 51873053  905 DVNECETGvHRCGEGQVCHNLPGSYRCDCKAGFQ 938
Cdd:cd00054    1 DIDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT 33
EGF_CA smart00179
Calcium-binding EGF-like domain;
857-904 5.95e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 44.16  E-value: 5.95e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 51873053     857 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYHasdDGTKCV 904
Cdd:smart00179    1 DIDECASGN-PCQNGGTCVNTVGSYRCE-----CPPGYT---DGRNCE 39
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
960-988 4.86e-05

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 41.46  E-value: 4.86e-05
                           10        20
                   ....*....|....*....|....*....
gi 51873053    960 CQHTCENTLGSYRCSCASGFLLAADGKRC 988
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA pfam07645
Calcium-binding EGF domain;
905-936 6.17e-05

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 41.07  E-value: 6.17e-05
                           10        20        30
                   ....*....|....*....|....*....|..
gi 51873053    905 DVNECETGVHRCGEGQVCHNLPGSYRCDCKAG 936
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECRCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
948-989 6.47e-05

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.08  E-value: 6.47e-05
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....
gi 51873053     948 DVNECwaSPGRLCQH--TCENTLGSYRCSCASGFLlaaDGKRCE 989
Cdd:smart00179    1 DIDEC--ASGNPCQNggTCVNTVGSYRCECPPGYT---DGRNCE 39
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
1011-1032 7.18e-05

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


Pssm-ID: 463661  Cd Length: 22  Bit Score: 40.86  E-value: 7.18e-05
                           10        20
                   ....*....|....*....|..
gi 51873053   1011 QCYCRQGYQLAEDGHTCTDIDE 1032
Cdd:pfam12662    1 TCSCPPGYQLDPDGRTCVDIDE 22
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
999-1027 9.01e-05

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 40.69  E-value: 9.01e-05
                           10        20
                   ....*....|....*....|....*....
gi 51873053    999 CSQECANIYGSYQCYCRQGYQLAEDGHTC 1027
Cdd:pfam14670    8 CSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
EGF_CA pfam07645
Calcium-binding EGF domain;
766-801 1.38e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 40.30  E-value: 1.38e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873053    766 DINECVTDLHTCSRGEHCVNTLGSFHCykalTCEPG 801
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFEC----RCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
857-895 2.11e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 39.93  E-value: 2.11e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 51873053  857 DINECTSLSePCRPGFSCINTVGSYTCQrnpliCARGYH 895
Cdd:cd00054    1 DIDECASGN-PCQNGGTCVNTVGSYRCS-----CPPGYT 33
EGF_CA smart00179
Calcium-binding EGF-like domain;
766-802 2.54e-04

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 39.54  E-value: 2.54e-04
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 51873053     766 DINECVTDlHTCSRGEHCVNTLGSFHCykalTCEPGY 802
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRC----ECPPGY 32
ANATO smart00104
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
445-480 3.41e-04

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 197517  Cd Length: 35  Bit Score: 39.24  E-value: 3.41e-04
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 51873053     445 CCAAGQQWAIDNDECLEIPESGTEDNvCRTAQRHCC 480
Cdd:smart00104    1 CCADGMRLAPMGETCEERAARINSGD-CRKAFLQCC 35
EGF_CA pfam07645
Calcium-binding EGF domain;
857-884 5.79e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 38.37  E-value: 5.79e-04
                           10        20
                   ....*....|....*....|....*...
gi 51873053    857 DINECTSLSEPCRPGFSCINTVGSYTCQ 884
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR 28
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
948-989 1.00e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 38.00  E-value: 1.00e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 51873053  948 DVNECwaSPGRLCQH--TCENTLGSYRCSCASGFLlaadGKRCE 989
Cdd:cd00054    1 DIDEC--ASGNPCQNggTCVNTVGSYRCSCPPGYT----GRNCE 38
EGF_CA smart00179
Calcium-binding EGF-like domain;
604-644 1.09e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.09e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873053     604 DQDECLLlpGELCQH--LCINTVGSYHCACFPGFSlqdDGRTC 644
Cdd:smart00179    1 DIDECAS--GNPCQNggTCVNTVGSYRCECPPGYT---DGRNC 38
EGF_CA smart00179
Calcium-binding EGF-like domain;
811-847 1.25e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.25e-03
                            10        20        30
                    ....*....|....*....|....*....|....*..
gi 51873053     811 DVDECAMGtHTCQPGFLCQNTKGSFYCQarqrCMDGF 847
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRCE----CPPGY 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
1072-1107 1.34e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 37.61  E-value: 1.34e-03
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 51873053    1072 DVDECALGtHNCSEAETCHNIQGSFRClrfECPPNY 1107
Cdd:smart00179    1 DIDECASG-NPCQNGGTCVNTVGSYRC---ECPPGY 32
FXa_inhibition pfam14670
Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is ...
685-717 1.41e-03

Coagulation Factor Xa inhibitory site; This short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442.


Pssm-ID: 464251 [Multi-domain]  Cd Length: 36  Bit Score: 37.22  E-value: 1.41e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 51873053    685 DNGPCKQVCSTVGGSAICSCFPGYAIMADGVSC 717
Cdd:pfam14670    4 NNGGCSHLCLNTPGGYTCSCPEGYELQDDGRTC 36
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
946-986 1.72e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 41.22  E-value: 1.72e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 51873053  946 CIDVNECwASPGRLCQHTCENTLGSYRCSCASGFLLAADGK 986
Cdd:cd01475  184 CVVPDLC-ATLSHVCQQVCISTPGSYLCACTEGYALLEDNK 223
cEGF pfam12662
Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved ...
972-993 1.75e-03

Complement Clr-like EGF-like; cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteriztic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL receptor. The core fold of the EGF domain consists of two small beta-hairpins packed against each other. Two major structural variants have been identified based on the structural context of the C-terminal cysteine residue of disulfide 'c' in the C-terminal hairpin: hEGFs and cEGFs. In cEGFs the C-terminal thiol resides on the C-terminal beta-sheet, resulting in long loop-lengths between the cysteine residues of disulfide 'c', typically C[10+]XC. These longer loop-lengths may have arisen by selective cysteine loss from a four-disulfide EGF template such as laminin or integrin. Tandem cEGF domains have five linking residues between terminal cysteines of adjacent domains. cEGF domains may or may not bind calcium in the linker region. cEGF domains with the consensus motif CXN4X[F,Y]XCXC are hydroxylated exclusively on the asparagine residue.


Pssm-ID: 463661  Cd Length: 22  Bit Score: 36.62  E-value: 1.75e-03
                           10        20
                   ....*....|....*....|..
gi 51873053    972 RCSCASGFLLAADGKRCEDVNE 993
Cdd:pfam12662    1 TCSCPPGYQLDPDGRTCVDIDE 22
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
766-805 2.22e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 36.85  E-value: 2.22e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 51873053  766 DINECvTDLHTCSRGEHCVNTLGSFHCykalTCEPGYALK 805
Cdd:cd00054    1 DIDEC-ASGNPCQNGGTCVNTVGSYRC----SCPPGYTGR 35
EGF_CA pfam07645
Calcium-binding EGF domain;
719-746 2.51e-03

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 36.45  E-value: 2.51e-03
                           10        20
                   ....*....|....*....|....*...
gi 51873053    719 DQDECLMGAHDCSRRQFCVNTLGSFYCV 746
Cdd:pfam07645    1 DVDECATGTHNCPANTVCVNTIGSFECR 28
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
804-842 2.56e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 40.83  E-value: 2.56e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 51873053  804 LKDGECEDVDECAMGTHTCQPGflCQNTKGSFYCQARQR 842
Cdd:cd01475  179 FQGKICVVPDLCATLSHVCQQV--CISTPGSYLCACTEG 215
EGF_CA smart00179
Calcium-binding EGF-like domain;
1029-1071 2.72e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 36.84  E-value: 2.72e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 51873053    1029 DIDECAQGAGILCTFRCLNVPGSYQCACPEqGYTmtaNGRSCK 1071
Cdd:smart00179    1 DIDECASGNPCQNGGTCVNTVGSYRCECPP-GYT---DGRNCE 39
ANATO smart00104
Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments ...
521-553 2.77e-03

Anaphylatoxin homologous domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 197517  Cd Length: 35  Bit Score: 36.54  E-value: 2.77e-03
                            10        20        30
                    ....*....|....*....|....*....|....*
gi 51873053     521 CCGLGLRVRAEGQSCESNPNLGY--PCNHVMLSCC 553
Cdd:smart00104    1 CCADGMRLAPMGETCEERAARINsgDCRKAFLQCC 35
ANATO pfam01821
Anaphylotoxin-like domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated ...
445-480 2.81e-03

Anaphylotoxin-like domain; C3a, C4a and C5a anaphylatoxins are protein fragments generated enzymatically in serum during activation of complement molecules C3, C4, and C5. They induce smooth muscle contraction. These fragments are homologous to a three-fold repeat in fibulins.


Pssm-ID: 460347  Cd Length: 36  Bit Score: 36.48  E-value: 2.81e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 51873053    445 CCAAGQQWAIDNDECLEIPESGTEDNVCRTAQRHCC 480
Cdd:pfam01821    1 CCLDGMKRNPMGRSCEQRAARIKEGPRCRKAFLQCC 36
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
903-937 3.85e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 40.45  E-value: 3.85e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 51873053  903 CVDVNECETGVHRCGegQVCHNLPGSYRCDCKAGF 937
Cdd:cd01475  184 CVVPDLCATLSHVCQ--QVCISTPGSYLCACTEGY 216
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
604-644 6.37e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 35.69  E-value: 6.37e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 51873053  604 DQDECLLLPGELCQHLCINTVGSYHCACFPGFSlqddGRTC 644
Cdd:cd00054    1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT----GRNC 37
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
811-847 6.43e-03

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 35.69  E-value: 6.43e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 51873053  811 DVDECAMGtHTCQPGFLCQNTKGSFYCQarqrCMDGF 847
Cdd:cd00054    1 DIDECASG-NPCQNGGTCVNTVGSYRCS----CPPGY 32
vWA_Matrilin cd01475
VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and ...
717-759 7.06e-03

VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.


Pssm-ID: 238752 [Multi-domain]  Cd Length: 224  Bit Score: 39.68  E-value: 7.06e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 51873053  717 CEDQDECLMGAHDCsrRQFCVNTLGSFYCVnhtvlCADGYILN 759
Cdd:cd01475  184 CVVPDLCATLSHVC--QQVCISTPGSYLCA-----CTEGYALL 219
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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