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Conserved domains on  [gi|57527112|ref|NP_001009661|]
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WW domain-binding protein 11 [Rattus norvegicus]

Protein Classification

WW domain binding protein 11( domain architecture ID 10559531)

WW domain binding protein 11 activates pre-mRNA splicing and may inhibit PP1 phosphatase activity

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Wbp11 pfam09429
WW domain binding protein 11; The WW domain is a small protein module with a triple-stranded ...
 12-92 5.29e-21

WW domain binding protein 11; The WW domain is a small protein module with a triple-stranded beta-sheet fold. This is a family of WW domain binding proteins.


:

Pssm-ID: 462795 [Multi-domain]  Cd Length: 76  Bit Score: 87.22  E-value: 5.29e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57527112    12 GKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKLDEMEFNPVQQPQlnekvLKDKRKKLRETFER 91
Cdd:pfam09429   1 EKSLNPADAYRKAQKKKELKKNKKERQKVREEKLAKKDPDRLEREIDELKELESSGKLSPH-----EKERLEELEKDLKA 75


                  .
gi 57527112    92 I 92
Cdd:pfam09429  76 V 76
 
Name Accession Description Interval E-value
Wbp11 pfam09429
WW domain binding protein 11; The WW domain is a small protein module with a triple-stranded ...
 12-92 5.29e-21

WW domain binding protein 11; The WW domain is a small protein module with a triple-stranded beta-sheet fold. This is a family of WW domain binding proteins.


Pssm-ID: 462795 [Multi-domain]  Cd Length: 76  Bit Score: 87.22  E-value: 5.29e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57527112    12 GKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKLDEMEFNPVQQPQlnekvLKDKRKKLRETFER 91
Cdd:pfam09429   1 EKSLNPADAYRKAQKKKELKKNKKERQKVREEKLAKKDPDRLEREIDELKELESSGKLSPH-----EKERLEELEKDLKA 75


                  .
gi 57527112    92 I 92
Cdd:pfam09429  76 V 76
 
Name Accession Description Interval E-value
Wbp11 pfam09429
WW domain binding protein 11; The WW domain is a small protein module with a triple-stranded ...
 12-92 5.29e-21

WW domain binding protein 11; The WW domain is a small protein module with a triple-stranded beta-sheet fold. This is a family of WW domain binding proteins.


Pssm-ID: 462795 [Multi-domain]  Cd Length: 76  Bit Score: 87.22  E-value: 5.29e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 57527112    12 GKFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKLDEMEFNPVQQPQlnekvLKDKRKKLRETFER 91
Cdd:pfam09429   1 EKSLNPADAYRKAQKKKELKKNKKERQKVREEKLAKKDPDRLEREIDELKELESSGKLSPH-----EKERLEELEKDLKA 75


                  .
gi 57527112    92 I 92
Cdd:pfam09429  76 V 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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