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Conserved domains on  [gi|163644318|ref|NP_001013011|]
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uncharacterized protein C9orf152 [Homo sapiens]

Protein Classification

DUF4682 domain-containing protein( domain architecture ID 11238983)

DUF4682 domain-containing protein similar to Homo sapiens protein C9orf152

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4682 pfam15733
Domain of unknown function (DUF4682); This domain family is found in eukaryotes, and is ...
 39-154 1.47e-50

Domain of unknown function (DUF4682); This domain family is found in eukaryotes, and is typically between 152 and 183 amino acids in length. The family is found in association with pfam00566. There is a conserved NHLL sequence motif.


:

Pssm-ID: 464830  Cd Length: 121  Bit Score: 161.00  E-value: 1.47e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163644318   39 IQFLRAQYEGLKRQQRTQAHLLVL-PKGGNTPAPAES---MVNAVWINKERRSSLSLEEAD-SEVEGRLEEAAQGCLQAP 113
Cdd:pfam15733   1 IQALKKQYERLRRRQRQQAHLIYIaPKTGNLPSPANSspvVVNHLLIGKKARSSNSGERAGpPEREGSLEEADRGCLQAP 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 163644318  114 KSPWHTHLEMHCLVQTSPQDTSHQVHHRGKLVGSDQRLPPE 154
Cdd:pfam15733  81 NSPWHTHLEMHRRVQTRAREQLGQGDSKGRLDGSDQRLKPE 121
 
Name Accession Description Interval E-value
DUF4682 pfam15733
Domain of unknown function (DUF4682); This domain family is found in eukaryotes, and is ...
 39-154 1.47e-50

Domain of unknown function (DUF4682); This domain family is found in eukaryotes, and is typically between 152 and 183 amino acids in length. The family is found in association with pfam00566. There is a conserved NHLL sequence motif.


Pssm-ID: 464830  Cd Length: 121  Bit Score: 161.00  E-value: 1.47e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163644318   39 IQFLRAQYEGLKRQQRTQAHLLVL-PKGGNTPAPAES---MVNAVWINKERRSSLSLEEAD-SEVEGRLEEAAQGCLQAP 113
Cdd:pfam15733   1 IQALKKQYERLRRRQRQQAHLIYIaPKTGNLPSPANSspvVVNHLLIGKKARSSNSGERAGpPEREGSLEEADRGCLQAP 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 163644318  114 KSPWHTHLEMHCLVQTSPQDTSHQVHHRGKLVGSDQRLPPE 154
Cdd:pfam15733  81 NSPWHTHLEMHRRVQTRAREQLGQGDSKGRLDGSDQRLKPE 121
 
Name Accession Description Interval E-value
DUF4682 pfam15733
Domain of unknown function (DUF4682); This domain family is found in eukaryotes, and is ...
 39-154 1.47e-50

Domain of unknown function (DUF4682); This domain family is found in eukaryotes, and is typically between 152 and 183 amino acids in length. The family is found in association with pfam00566. There is a conserved NHLL sequence motif.


Pssm-ID: 464830  Cd Length: 121  Bit Score: 161.00  E-value: 1.47e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 163644318   39 IQFLRAQYEGLKRQQRTQAHLLVL-PKGGNTPAPAES---MVNAVWINKERRSSLSLEEAD-SEVEGRLEEAAQGCLQAP 113
Cdd:pfam15733   1 IQALKKQYERLRRRQRQQAHLIYIaPKTGNLPSPANSspvVVNHLLIGKKARSSNSGERAGpPEREGSLEEADRGCLQAP 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 163644318  114 KSPWHTHLEMHCLVQTSPQDTSHQVHHRGKLVGSDQRLPPE 154
Cdd:pfam15733  81 NSPWHTHLEMHRRVQTRAREQLGQGDSKGRLDGSDQRLKPE 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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