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Conserved domains on  [gi|71834496|ref|NP_001025346|]
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AN1-type zinc finger protein 3 [Danio rerio]

Protein Classification

zf-A20 and Peroxin-3 domain-containing protein( domain architecture ID 10484656)

zf-A20 and Peroxin-3 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CUZ1 super family cl27569
CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As ...
 155-191 7.52e-06

CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As/Sb toxicity) [Defense mechanisms];


The actual alignment was detected with superfamily member COG3582:

Pssm-ID: 442801 [Multi-domain]  Cd Length: 279  Bit Score: 45.67  E-value: 7.52e-06
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 71834496 155 RCHRCQTKLELVQQelgsCR-CGYVFCMLHRLPEQHDC 191
Cdd:COG3582   3 KCDICGKEENLPYQ----CRyCGGTFCSEHRLPENHDC 36
zf-A20 pfam01754
A20-like zinc finger; The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding ...
 19-36 2.16e-03

A20-like zinc finger; The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation.


:

Pssm-ID: 460313  Cd Length: 24  Bit Score: 34.40  E-value: 2.16e-03
                          10
                  ....*....|....*...
gi 71834496    19 PCGFWGSSKTMNLCSKCF 36
Cdd:pfam01754   6 GCGFYGSPATNGLCSKCY 23
 
Name Accession Description Interval E-value
CUZ1 COG3582
CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As ...
 155-191 7.52e-06

CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As/Sb toxicity) [Defense mechanisms];


Pssm-ID: 442801 [Multi-domain]  Cd Length: 279  Bit Score: 45.67  E-value: 7.52e-06
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 71834496 155 RCHRCQTKLELVQQelgsCR-CGYVFCMLHRLPEQHDC 191
Cdd:COG3582   3 KCDICGKEENLPYQ----CRyCGGTFCSEHRLPENHDC 36
zf-A20 pfam01754
A20-like zinc finger; The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding ...
 19-36 2.16e-03

A20-like zinc finger; The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation.


Pssm-ID: 460313  Cd Length: 24  Bit Score: 34.40  E-value: 2.16e-03
                          10
                  ....*....|....*...
gi 71834496    19 PCGFWGSSKTMNLCSKCF 36
Cdd:pfam01754   6 GCGFYGSPATNGLCSKCY 23
 
Name Accession Description Interval E-value
CUZ1 COG3582
CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As ...
 155-191 7.52e-06

CDC48-associated ubiquitin-like protein CUZ1, contains AN1-type Zn-finger (protection from As/Sb toxicity) [Defense mechanisms];


Pssm-ID: 442801 [Multi-domain]  Cd Length: 279  Bit Score: 45.67  E-value: 7.52e-06
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 71834496 155 RCHRCQTKLELVQQelgsCR-CGYVFCMLHRLPEQHDC 191
Cdd:COG3582   3 KCDICGKEENLPYQ----CRyCGGTFCSEHRLPENHDC 36
zf-A20 pfam01754
A20-like zinc finger; The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding ...
 19-36 2.16e-03

A20-like zinc finger; The A20 Zn-finger of bovine/human Rabex5/rabGEF1 is a Ubiquitin Binding Domain. The zinc finger mediates self-association in A20. These fingers also mediate IL-1-induced NF-kappa B activation.


Pssm-ID: 460313  Cd Length: 24  Bit Score: 34.40  E-value: 2.16e-03
                          10
                  ....*....|....*...
gi 71834496    19 PCGFWGSSKTMNLCSKCF 36
Cdd:pfam01754   6 GCGFYGSPATNGLCSKCY 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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