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Conserved domains on  [gi|270309169|ref|NP_001034299|]
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putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform 3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PssE super family cl49515
PssE/Cps14G family polysaccharide biosynthesis glycosyltransferase;
4-57 1.27e-07

PssE/Cps14G family polysaccharide biosynthesis glycosyltransferase;


The actual alignment was detected with superfamily member NF041548:

Pssm-ID: 469433 [Multi-domain]  Cd Length: 146  Bit Score: 47.52  E-value: 1.27e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 270309169   4 VFVTVGTTSFDDLIACVsapDSLqkIESLGYNRLILQIGRGTVVPEPFSTESFT 57
Cdd:NF041548   1 IFVTVGTTRFDSLIKAI---DEL--IEGLIDYEVTFQIGDGKYIPKNGEYFDFL 49
 
Name Accession Description Interval E-value
PssE NF041548
PssE/Cps14G family polysaccharide biosynthesis glycosyltransferase;
4-57 1.27e-07

PssE/Cps14G family polysaccharide biosynthesis glycosyltransferase;


Pssm-ID: 469433 [Multi-domain]  Cd Length: 146  Bit Score: 47.52  E-value: 1.27e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 270309169   4 VFVTVGTTSFDDLIACVsapDSLqkIESLGYNRLILQIGRGTVVPEPFSTESFT 57
Cdd:NF041548   1 IFVTVGTTRFDSLIKAI---DEL--IEGLIDYEVTFQIGDGKYIPKNGEYFDFL 49
Glyco_tran_28_C pfam04101
Glycosyltransferase family 28 C-terminal domain; The glycosyltransferase family 28 includes ...
 4-60 2.77e-03

Glycosyltransferase family 28 C-terminal domain; The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.


Pssm-ID: 427711 [Multi-domain]  Cd Length: 166  Bit Score: 35.77  E-value: 2.77e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 270309169    4 VFVTVGTTSFDDLIACVsaPDSLQKIESLGYNRLILQIGRGTVVPEPFSTESFTLDV 60
Cdd:pfam04101   2 ILVTGGSQGARALNELV--LSVLPLLELKGELQVLHQTGKGDLEEVKIDYAELGINY 56
 
Name Accession Description Interval E-value
PssE NF041548
PssE/Cps14G family polysaccharide biosynthesis glycosyltransferase;
4-57 1.27e-07

PssE/Cps14G family polysaccharide biosynthesis glycosyltransferase;


Pssm-ID: 469433 [Multi-domain]  Cd Length: 146  Bit Score: 47.52  E-value: 1.27e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 270309169   4 VFVTVGTTSFDDLIACVsapDSLqkIESLGYNRLILQIGRGTVVPEPFSTESFT 57
Cdd:NF041548   1 IFVTVGTTRFDSLIKAI---DEL--IEGLIDYEVTFQIGDGKYIPKNGEYFDFL 49
Glyco_tran_28_C pfam04101
Glycosyltransferase family 28 C-terminal domain; The glycosyltransferase family 28 includes ...
 4-60 2.77e-03

Glycosyltransferase family 28 C-terminal domain; The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.


Pssm-ID: 427711 [Multi-domain]  Cd Length: 166  Bit Score: 35.77  E-value: 2.77e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 270309169    4 VFVTVGTTSFDDLIACVsaPDSLQKIESLGYNRLILQIGRGTVVPEPFSTESFTLDV 60
Cdd:pfam04101   2 ILVTGGSQGARALNELV--LSVLPLLELKGELQVLHQTGKGDLEEVKIDYAELGINY 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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