|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
458-1246 |
8.03e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.73 E-value: 8.03e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 458 LVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQ---QDLQSKFVAKENEVQSLHS 534
Cdd:TIGR02168 230 LVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQkelYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 535 KLTDtlvSKQQLEQRLMQLMESEQKRVNKEESLQM---QVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAE 611
Cdd:TIGR02168 310 RLAN---LERQLEELEAQLEELESKLDELAEELAEleeKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRS 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 612 KDKQIKQTEDSLASERDRLtskEEELKDIQNMNFLLKAEVQKLQALANEQAAAAH-----ELEKMQQSVYVKDDKIRLLE 686
Cdd:TIGR02168 387 KVAQLELQIASLNNEIERL---EARLERLEDRRERLQQEIEELLKKLEEAELKELqaeleELEEELEELQEELERLEEAL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 687 EQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVS--EQPNKDVVEQMEKCIQEKDE-----KLKTVEELLETGLiqVA 759
Cdd:TIGR02168 464 EELREELEEAEQALDAAERELAQLQARLDSLERLQEnlEGFSEGVKALLKNQSGLSGIlgvlsELISVDEGYEAAI--EA 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 760 TKEEELNAIRTENSSLTKE-VQDLKAKQNDQVSFASLVeelkkvihekdgkiksveellEAELLKVANKEKTVQLSITSK 838
Cdd:TIGR02168 542 ALGGRLQAVVVENLNAAKKaIAFLKQNELGRVTFLPLD---------------------SIKGTEIQGNDREILKNIEGF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 839 VQELQNLLKGKEEQMNTMKAVLeekekdlaNTGKWLQDLQEENESLKAHVQEVAQHNL------KEASSASQFEELEIVL 912
Cdd:TIGR02168 601 LGVAKDLVKFDPKLRKALSYLL--------GGVLVVDDLDNALELAKKLRPGYRIVTLdgdlvrPGGVITGGSAKTNSSI 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 913 KEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNEL 992
Cdd:TIGR02168 673 LERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQL 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 993 DSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTSKERQQQVEAVELEAKEVlkklfpkvsvpsnlsygewl 1072
Cdd:TIGR02168 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEL-------------------- 812
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1073 hgfekkakecmagtsgsEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTI 1152
Cdd:TIGR02168 813 -----------------TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL 875
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1153 KQMQSSFTSSEQELERLRSE----NKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQN----- 1223
Cdd:TIGR02168 876 EALLNERASLEEALALLRSEleelSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSltlee 955
|
810 820
....*....|....*....|....*.
gi 118498362 1224 ---ERQKVAGDLHKAQQSLELIQSKI 1246
Cdd:TIGR02168 956 aeaLENKIEDDEEEARRRLKRLENKI 981
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
448-1249 |
1.15e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.80 E-value: 1.15e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 448 LNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAAtQLKVQLQEAER-----RWEEvqsyIRKRTAEHEAAQQDLQSKF 522
Cdd:TIGR02168 181 LERTRENLDRLEDILNELERQLKSLERQAEKAERYK-ELKAELRELELallvlRLEE----LREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 523 VAKENEVQSLHSKLTDTLVSKQQLEQRLmqlmESEQKRVNkeeSLQMQVQDILEQNEALKAQIQQFHSQIaaqtsasvla 602
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEI----EELQKELY---ALANEISRLEQQKQILRERLANLERQL---------- 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 603 EELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDiqnmnflLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKI 682
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELES-------LEAELEELEAELEELESRLEELEEQLETLRSKVAQL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 683 RLLEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKE 762
Cdd:TIGR02168 392 ELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELE 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 763 EELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGkiksveelleaellkvankektvqlsITSKVQEL 842
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSG--------------------------LSGILGVL 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 843 QNLLKGKEEQMNTMKAVLEEKEKDL----ANTGKWLQDLQEENESLKAHVQE--VAQHNLKEASSASQFEELEIVLkeke 916
Cdd:TIGR02168 526 SELISVDEGYEAAIEAALGGRLQAVvvenLNAAKKAIAFLKQNELGRVTFLPldSIKGTEIQGNDREILKNIEGFL---- 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 917 NELKRLEAMLKERESDLSSKTQLLQDVQDenklFKSQIEQLKQQNYQQA-------------SSFPPHEELLKVISEREK 983
Cdd:TIGR02168 602 GVAKDLVKFDPKLRKALSYLLGGVLVVDD----LDNALELAKKLRPGYRivtldgdlvrpggVITGGSAKTNSSILERRR 677
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 984 EISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKvNKTSKERQQQVEAVELEAKEVLKKLfpkvsvp 1063
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEEL-SRQISALRKDLARLEAEVEQLEERI------- 749
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1064 sNLSYGEWLHGFEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKV 1143
Cdd:TIGR02168 750 -AQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLES 828
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1144 KVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQN 1223
Cdd:TIGR02168 829 LERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
810 820
....*....|....*....|....*.
gi 118498362 1224 ERQKVAGDLHKAQQSLELIQSKIVKA 1249
Cdd:TIGR02168 909 KRSELRRELEELREKLAQLELRLEGL 934
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
446-995 |
8.97e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.60 E-value: 8.97e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 446 AELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAK 525
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 526 ENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 605
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 606 HKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLL 685
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 686 EEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEkLKTVEELLETgLIQVATKEEEL 765
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAV-LIGVEAAYEA-ALEAALAAALQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 766 NAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEE--LLEAELLKVANKEKTVQLSITSKVQELQ 843
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAavDLVASDLREADARYYVLGDTLLGRTLVA 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 844 NLLKGKEEQMNTMKAVLEEKEKDLAnTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEiVLKEKENELKRLE 923
Cdd:COG1196 630 ARLEAALRRAVTLAGRLREVTLEGE-GGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE-LEEALLAEEEEER 707
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 118498362 924 AMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSL 995
Cdd:COG1196 708 ELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
408-1225 |
1.73e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.48 E-value: 1.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 408 FQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSA------ELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQ 481
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEvseleeEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 482 AATQLKVQLQEAERRWEEVQsyirKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRV 561
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELA----EELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLE 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 562 NKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAE--ELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKD 639
Cdd:TIGR02168 393 LQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElkELQAELEELEEELEELQEELERLEEALEELREELEE 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 640 IQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSV-YVKDDKIRL------------LEEQLQHEISNKMEEF------ 700
Cdd:TIGR02168 473 AEQALDAAERELAQLQARLDSLERLQENLEGFSEGVkALLKNQSGLsgilgvlselisVDEGYEAAIEAALGGRlqavvv 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 701 KILNDQNKALKSEVQKLQTLVSEQPNKDVVEQMekcIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQ 780
Cdd:TIGR02168 553 ENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTE---IQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVD 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 781 DLKAKQNDQV------SFASLVEEL---KKVIHEKDGKIKSVEELLEAELLKVANKEKTVQlsitSKVQELQNLLKGKEE 851
Cdd:TIGR02168 630 DLDNALELAKklrpgyRIVTLDGDLvrpGGVITGGSAKTNSSILERRREIEELEEKIEELE----EKIAELEKALAELRK 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 852 QMNTMKAVLEEKEKDLANTGkwlQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAMLKERES 931
Cdd:TIGR02168 706 ELEELEEELEQLRKELEELS---RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA 782
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 932 DLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDLRE 1011
Cdd:TIGR02168 783 EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIE 862
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1012 KNWEAMEAlastekmLQDKVNKTSKERQQQVEAVElEAKEVLKKLfpkvsvpsnlsygewlhgfekkakecmagtsgSEE 1091
Cdd:TIGR02168 863 ELEELIEE-------LESELEALLNERASLEEALA-LLRSELEEL--------------------------------SEE 902
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1092 VKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQrsvEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRS 1171
Cdd:TIGR02168 903 LRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQ---ERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLEN 979
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 118498362 1172 ENKDIE--NLRREREHLEMELEKAEMerSTYVTEVRELKAQLNETLTKLRTEQNER 1225
Cdd:TIGR02168 980 KIKELGpvNLAAIEEYEELKERYDFL--TAQKEDLTEAKETLEEAIEEIDREARER 1033
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
398-960 |
4.58e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.20 E-value: 4.58e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 398 YQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDYARLVNELTEKTGKLQQEEVQKK 477
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELE-LELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 478 NAEQAAtqlkVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESE 557
Cdd:COG1196 313 ELEERL----EELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEEL 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 558 QKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEEL 637
Cdd:COG1196 389 LEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAEL 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 638 KDIQNmnfLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQheISNKMEEFKILNDQNKALKSEVQKL 717
Cdd:COG1196 469 LEEAA---LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG--LRGLAGAVAVLIGVEAAYEAALEAA 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 718 QTLVSEQPNKDVVEQMEKCIQE-KDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLV 796
Cdd:COG1196 544 LAAALQNIVVEDDEVAAAAIEYlKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLL 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 797 EElkkVIHEKDGKIKSVEELLEAELLKVANKEKTVQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLAntgkwlQD 876
Cdd:COG1196 624 GR---TLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEE------LE 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 877 LQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENElkRLEAMLKERESDLSSKTQLLQDVQDENKLfKSQIEQ 956
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREE--LLEELLEEEELLEEEALEELPEPPDLEEL-ERELER 771
|
....
gi 118498362 957 LKQQ 960
Cdd:COG1196 772 LERE 775
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
667-1300 |
6.21e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.94 E-value: 6.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 667 ELEKMQQSVYVKDdkirllEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEqpNKDVVEQMEKCIQEKDEKLKT 746
Cdd:TIGR02168 221 ELRELELALLVLR------LEELREELEELQEELKEAEEELEELTAELQELEEKLEE--LRLEVSELEEEIEELQKELYA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 747 VEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQvsfASLVEELKKVIHEKDGKIKSVEELLEAELLKVAN 826
Cdd:TIGR02168 293 LANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDEL---AEELAELEEKLEELKEELESLEAELEELEAELEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 827 KEKTVQlSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESL---------KAHVQEVAQHNLK 897
Cdd:TIGR02168 370 LESRLE-ELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELlkkleeaelKELQAELEELEEE 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 898 EASSASQFEELEIVLKEKENELKRLEAMLKERESDL---SSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEEL 974
Cdd:TIGR02168 449 LEELQEELERLEEALEELREELEEAEQALDAAERELaqlQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSEL 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 975 LKVISEREKEISG---------LWNELDSLKDAVEHQRKKN-----------NDLREKNWEAMEALASTEKMLQDKVNkt 1034
Cdd:TIGR02168 529 ISVDEGYEAAIEAalggrlqavVVENLNAAKKAIAFLKQNElgrvtflpldsIKGTEIQGNDREILKNIEGFLGVAKD-- 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1035 skerqqqVEAVELEAKEVLKKLFPKVSVPSNL---------SYGEW----LHGFEKKAKECMAGTSGSEEVKVLEHK--L 1099
Cdd:TIGR02168 607 -------LVKFDPKLRKALSYLLGGVLVVDDLdnalelakkLRPGYrivtLDGDLVRPGGVITGGSAKTNSSILERRreI 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1100 KEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENL 1179
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1180 RREREHLEMELEKAEMERSTYVTEVRELKAQLNET---LTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAAGDTTV- 1255
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLkeeLKALREALDELRAELTLLNEEAANLRERLESLERRIAATERr 839
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 118498362 1256 IENSDVSPETESSEKETMSVSLNQTVTQLQQLLQAVnQQLTKEKE 1300
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAEIEELEELIEELESEL-EALLNERA 883
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
29-160 |
4.61e-12 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 64.76 E-value: 4.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 29 MKETLYDEVLAKQKREQKLIPTKTDKKKAEKKKNKKK------EIQNGNLHESD----SESVPRDFKLSDALAVEDDQVA 98
Cdd:pfam05104 1 MKETSYEEALAKQRRELKKTPTEKEKKKKEKKKEKKKkskkkeEKPNGKLPESEqadeSEEEPREFKTPDEAPSAALEPE 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 118498362 99 PVPlnVVETSSSVRERKKKEKKQKPVLEEQVIKESDASKIPGKKVEPVPVTKQPTPPSEAAA 160
Cdd:pfam05104 81 PVP--TPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVEPAETPEAVQPKPALEKEEPPA 140
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
309-1060 |
1.69e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.85 E-value: 1.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 309 KEKSGVIQDALKKSSKGELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMTEKER---SNVVITRMKDRIGTLEK 385
Cdd:TIGR02168 300 LEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEleeLEAELEELESRLEELEE 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 386 EHNVFQNKIHVSYQETQQMQMKFQqvreQMEAEIAHLKQENGILRdavSNTTNQLESKQSAELNKLRQDYARLVNELTEK 465
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEIE----RLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEEL 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 466 TGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSyirkRTAEHEAAQQDLQSKFVAKENEVQSLhSKLTDTLvskqq 545
Cdd:TIGR02168 453 QEELERLEEALEELREELEEAEQALDAAERELAQLQA----RLDSLERLQENLEGFSEGVKALLKNQ-SGLSGIL----- 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 546 leQRLMQLMESEQK-RVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSA-SVLAEELHKVIAEKDKQIKQTEDSL 623
Cdd:TIGR02168 523 --GVLSELISVDEGyEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTfLPLDSIKGTEIQGNDREILKNIEGF 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 624 ASERDRLTSKEEELKDiqNMNFLL-----------KAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHE 692
Cdd:TIGR02168 601 LGVAKDLVKFDPKLRK--ALSYLLggvlvvddldnALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRRE 678
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 693 ISNKMEEFKILNDQNKALKSEVQKLQTLVSEQpnKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTEN 772
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEEL--EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL 756
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 773 SSLTKEVQDLKAKQNDQvsfASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQL------SITSKVQELQNLL 846
Cdd:TIGR02168 757 TELEAEIEELEERLEEA---EEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLlneeaaNLRERLESLERRI 833
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 847 KGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEE----NESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRL 922
Cdd:TIGR02168 834 AATERRLEDLEEQIEELSEDIESLAAEIEELEELieelESELEALLNERASLEEALALLRSELEELSEELRELESKRSEL 913
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 923 EAMLKEResdlssKTQLLQDVQDENKLfKSQIEQLKQQNYQQASSfpPHEELLKVISEREKEISGLWNELDSLKDAVehq 1002
Cdd:TIGR02168 914 RRELEEL------REKLAQLELRLEGL-EVRIDNLQERLSEEYSL--TLEEAEALENKIEDDEEEARRRLKRLENKI--- 981
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 118498362 1003 rkknNDLREKNWEAMEALASTEKMLQ------DKVNKTSKERQQQVEAVELEAKEVLKKLFPKV 1060
Cdd:TIGR02168 982 ----KELGPVNLAAIEEYEELKERYDfltaqkEDLTEAKETLEEAIEEIDREARERFKDTFDQV 1041
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
442-884 |
2.63e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.57 E-value: 2.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 442 SKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTaEHEAAQQDLQSK 521
Cdd:TIGR04523 148 KKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNK-SLESQISELKKQ 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 522 FVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAA--QTSAS 599
Cdd:TIGR04523 227 NNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlnNQKEQ 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 600 VLAEELHKVIAEKDKQIKQTEDSLA-------SERDRLTSKEEELKDIQNMNFLLKAE-------VQKLQALANEQAAAA 665
Cdd:TIGR04523 307 DWNKELKSELKNQEKKLEEIQNQISqnnkiisQLNEQISQLKKELTNSESENSEKQREleekqneIEKLKKENQSYKQEI 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 666 HELEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEQPNKDVV------------EQM 733
Cdd:TIGR04523 387 KNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVkeliiknldntrESL 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 734 EKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNdqvSFASLVEELKKVIHEKDGKIKSV 813
Cdd:TIGR04523 467 ETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKIS---SLKEKIEKLESEKKEKESKISDL 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 814 E---------------ELLEAELLKVANKEKTVQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQ 878
Cdd:TIGR04523 544 EdelnkddfelkkenlEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAK 623
|
....*.
gi 118498362 879 EENESL 884
Cdd:TIGR04523 624 KENEKL 629
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
610-1278 |
3.89e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.70 E-value: 3.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 610 AEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQL 689
Cdd:PTZ00121 1127 ARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAAR 1206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 690 QHEISNKMEEFKILNDQNKAlkSEVQKlqtlvSEQPNKDVVEQmekciqEKDEKLKTVEELLETGLIQVATKEEELNAIR 769
Cdd:PTZ00121 1207 KAEEERKAEEARKAEDAKKA--EAVKK-----AEEAKKDAEEA------KKAEEERNNEEIRKFEEARMAHFARRQAAIK 1273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 770 TENSSLTKEVQdlKAKQNDQVSFASLVEELKKViheKDGKIKSVEELLEAELLKVANKEKTVQLSITSKVQELQNLLKGK 849
Cdd:PTZ00121 1274 AEEARKADELK--KAEEKKKADEAKKAEEKKKA---DEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAA 1348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 850 EEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEV---------AQHNLKEASSASQFEELEIV---LKEKEN 917
Cdd:PTZ00121 1349 KAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKkkadeakkkAEEDKKKADELKKAAAAKKKadeAKKKAE 1428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 918 ELKRLEAMLKERESDLSS---KTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDS 994
Cdd:PTZ00121 1429 EKKKADEAKKKAEEAKKAdeaKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 995 LKDAVE----HQRKKNNDLR--EKNWEAMEALASTEKMLQDKVNKT-------------SKERQQQVEAVELEAKEVLKK 1055
Cdd:PTZ00121 1509 KKKADEakkaEEAKKADEAKkaEEAKKADEAKKAEEKKKADELKKAeelkkaeekkkaeEAKKAEEDKNMALRKAEEAKK 1588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1056 LFPKVSVPSNLSYGEWLHGFEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVL-AETEGILQKLQRSV 1134
Cdd:PTZ00121 1589 AEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKkAEEENKIKAAEEAK 1668
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1135 EQEENKWKVKvdeshkTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEM---ELEKAEMERSTYVTEVRELKAQL 1211
Cdd:PTZ00121 1669 KAEEDKKKAE------EAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKkaeELKKAEEENKIKAEEAKKEAEED 1742
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 118498362 1212 NETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAAGDTTVIENSDVSPETESSEKETMSVSLN 1278
Cdd:PTZ00121 1743 KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFAN 1809
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
416-958 |
4.62e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.85 E-value: 4.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 416 EAEIAHLKQENGILRDAVSNTTNQLESKQ---SAELNKLRqdyaRLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQE 492
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELpelREELEKLE----KEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 493 AERRWEEVqsyiRKRTAEHEAAQQDLQS-KFVAKE-NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQ 570
Cdd:PRK03918 264 LEERIEEL----KKEIEELEEKVKELKElKEKAEEyIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEER 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 571 VQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAE-KDKQIKQTEDSLASERDRLTSKEEELKDIqnmnfllKA 649
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRlTGLTPEKLEKELEELEKAKEEIEEEISKI-------TA 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 650 EVQKLQALANEQAAAAHELEKMQQSVYV------KDDKIRLLEEQLQhEISNKMEEFKILNDQNKALKSEVQKLQTLVSE 723
Cdd:PRK03918 413 RIGELKKEIKELKKAIEELKKAKGKCPVcgreltEEHRKELLEEYTA-ELKRIEKELKEIEEKERKLRKELRELEKVLKK 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 724 QPNKDVVEQMEKCIQEKDEKLKTVE-ELLETGLIQVATKEEELNAIRTENSSLTKEVQDLkakqndqvsfaslvEELKKV 802
Cdd:PRK03918 492 ESELIKLKELAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKL--------------EELKKK 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 803 IHEKDGKIKSVEELLEAELLKVANKEKTVQLSITSKVQELQNL------LKGKEEQMNTMKAVLEEKEKDLANTGKWLQD 876
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFyneyleLKDAEKELEREEKELKKLEEELDKAFEELAE 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 877 LQEENESLKAHVQEvaqhnLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQ 956
Cdd:PRK03918 638 TEKRLEELRKELEE-----LEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKE 712
|
..
gi 118498362 957 LK 958
Cdd:PRK03918 713 LE 714
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
602-1219 |
5.21e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.85 E-value: 5.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 602 AEELHKVIAEKDKQIKQTEDSLASE---RDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVyvk 678
Cdd:PRK03918 164 YKNLGEVIKEIKRRIERLEKFIKRTeniEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEI--- 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 679 dDKIRLLEEQLQHEISNKMEEFKILNDQNKALKSEVQKLqtlvseqpnKDVVEQMEKcIQEKDEKLKTVEELLETGLIQV 758
Cdd:PRK03918 241 -EELEKELESLEGSKRKLEEKIRELEERIEELKKEIEEL---------EEKVKELKE-LKEKAEEYIKLSEFYEEYLDEL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 759 ATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQLSITSK 838
Cdd:PRK03918 310 REIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 839 VQELQNLLKGKEE------QMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKE------ASSASQFE 906
Cdd:PRK03918 390 EKELEELEKAKEEieeeisKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEeytaelKRIEKELK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 907 ELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQqassfppHEELLKVISEREKEIS 986
Cdd:PRK03918 470 EIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEE-------YEKLKEKLIKLKGEIK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 987 GLWNELdslkdavehqrKKNNDLREKNWEAMEALASTEKMLQDKVNKTSKERQQQVEAVELEAKEvLKKLfpkvsvpsnl 1066
Cdd:PRK03918 543 SLKKEL-----------EKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKE-LEPF---------- 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1067 sYGEWLhgfekkakecmagtsgseEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWkvkvd 1146
Cdd:PRK03918 601 -YNEYL------------------ELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKY----- 656
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 118498362 1147 eSHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLnETLTKLR 1219
Cdd:PRK03918 657 -SEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKAL-ERVEELR 727
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
461-1055 |
5.50e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 5.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 461 ELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSkltdtl 540
Cdd:PTZ00121 1221 EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADE------ 1294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 541 vSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTE 620
Cdd:PTZ00121 1295 -AKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKK 1373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 621 DSLASERDRLTSKEEELKdiqnmnfllKAEvqKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEF 700
Cdd:PTZ00121 1374 EEAKKKADAAKKKAEEKK---------KAD--EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 701 KILNDQNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQE--KDEKLKTVEELLETGLIQVATKEEElnaiRTENSSLTKE 778
Cdd:PTZ00121 1443 AKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEakKADEAKKKAEEAKKKADEAKKAAEA----KKKADEAKKA 1518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 779 VQDLKAKQNDQVSFASLVEELKKVIHEKDG-KIKSVEELLEAELLKVANKEKTVQLSITSKVQELQNLLKGKEEQMNTMK 857
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKADEAKKAEEKKKAdELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVM 1598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 858 AVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKT 937
Cdd:PTZ00121 1599 KLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAE 1678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 938 QLLQDVQDENKlfksQIEQLKQQNYQQASSfpphEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEam 1017
Cdd:PTZ00121 1679 EAKKAEEDEKK----AAEALKKEAEEAKKA----EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE-- 1748
|
570 580 590
....*....|....*....|....*....|....*...
gi 118498362 1018 ealASTEKMLQDKVNKTSKERQQQVEAVELEAKEVLKK 1055
Cdd:PTZ00121 1749 ---AKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE 1783
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
357-970 |
5.78e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 60.90 E-value: 5.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 357 QLTQEMMTEKERSNVVITRMKDRIGTLEKEHnvfQNKIHVSYQetqQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNT 436
Cdd:pfam15921 224 KILRELDTEISYLKGRIFPVEDQLEALKSES---QNKIELLLQ---QHQDRIEQLISEHEVEITGLTEKASSARSQANSI 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 437 TNQLE------------------------SKQSAELNKLRQDYARLVNELTEK----TGKLQQEEVQKKNAEQAATQLKV 488
Cdd:pfam15921 298 QSQLEiiqeqarnqnsmymrqlsdlestvSQLRSELREAKRMYEDKIEELEKQlvlaNSELTEARTERDQFSQESGNLDD 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 489 QLQ---------EAERRWEEVQS-YIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQ 558
Cdd:pfam15921 378 QLQklladlhkrEKELSLEKEQNkRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKN 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 559 KRVNKEESLQMQVQdilEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELK 638
Cdd:pfam15921 458 ESLEKVSSLTAQLE---STKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQ 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 639 DIQN-----MNFLLKAEVQKLQALANEQAAA--AHELEKMQQSVYVKD---DKIRLLEEQLQHEISNK---MEEFKILND 705
Cdd:pfam15921 535 HLKNegdhlRNVQTECEALKLQMAEKDKVIEilRQQIENMTQLVGQHGrtaGAMQVEKAQLEKEINDRrleLQEFKILKD 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 706 QNKAlksEVQKLQTLVSeqpnkDVVEQMEKCIQEKDEKLKTVEELLEtgliqvaTKEEELNAIRTENSSLTKEVQDLKAK 785
Cdd:pfam15921 615 KKDA---KIRELEARVS-----DLELEKVKLVNAGSERLRAVKDIKQ-------ERDQLLNEVKTSRNELNSLSEDYEVL 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 786 QNDqvsFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQLSITSKVQeLQNLLKGKEEQMNTMKAVLEEKEK 865
Cdd:pfam15921 680 KRN---FRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMG-MQKQITAKRGQIDALQSKIQFLEE 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 866 DLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKeneLKRLEAMLKERESDLSSKTQLLQDVQD 945
Cdd:pfam15921 756 AMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEK---VANMEVALDKASLQFAECQDIIQRQEQ 832
|
650 660
....*....|....*....|....*....
gi 118498362 946 ENKLFKSQ----IEQLKQQNYQQASSFPP 970
Cdd:pfam15921 833 ESVRLKLQhtldVKELQGPGYTSNSSMKP 861
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
356-1046 |
9.94e-09 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 59.98 E-value: 9.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 356 KQLTQEMMTEKERSNVVITRMKDRIGTLEKEHNVFQNKIHVSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSN 435
Cdd:TIGR00618 165 KKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAY 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 436 TTNQLESKQSaelnklRQDYARLVNELTEKTGKLQQEEvqkknAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQ 515
Cdd:TIGR00618 245 LTQKREAQEE------QLKKQQLLKQLRARIEELRAQE-----AVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIH 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 516 QDLQSKFVAKENEVQSLHSKLTDTLVSKQQleQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQ 595
Cdd:TIGR00618 314 TELQSKMRSRAKLLMKRAAHVKQQSSIEEQ--RRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 596 TSASVLAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKlqaLANEQAAAAHELEKMQQSV 675
Cdd:TIGR00618 392 TQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITC---TAQCEKLEKIHLQESAQSL 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 676 YVKDDKIRLLEEQLQHEISNKMEEFKILNDQN-------KALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVE 748
Cdd:TIGR00618 469 KEREQQLQTKEQIHLQETRKKAVVLARLLELQeepcplcGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVY 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 749 ELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNdqvSFASLVEELKKVIHEKDGKIKSVEELLEAELLKV---- 824
Cdd:TIGR00618 549 HQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIP---NLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLqpeq 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 825 ---------ANKEKTVQLSITSKVQELQNLLkgKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHN 895
Cdd:TIGR00618 626 dlqdvrlhlQQCSQELALKLTALHALQLTLT--QERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQ 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 896 LKeassasqFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQdeNKLFKSQIEQLKQQNYQQASSFP------ 969
Cdd:TIGR00618 704 TL-------LRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSL--KELMHQARTVLKARTEAHFNNNEevtaal 774
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 970 ----PHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEA-LASTEKMLQDKVNKTSKERQQQVEA 1044
Cdd:TIGR00618 775 qtgaELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQeEEQFLSRLEEKSATLGEITHQLLKY 854
|
..
gi 118498362 1045 VE 1046
Cdd:TIGR00618 855 EE 856
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
741-1225 |
1.09e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.69 E-value: 1.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 741 DEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAkqndqvsFASLVEELKKVIHEKDGKIKSVEELLEAE 820
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE-------LKEEIEELEKELESLEGSKRKLEEKIREL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 821 LLKVANKEKTVQlSITSKVQELQNLlKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAqhnlkeaS 900
Cdd:PRK03918 265 EERIEELKKEIE-ELEEKVKELKEL-KEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELE-------E 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 901 SASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQlKQQNYQQASsfpphEELLKVISE 980
Cdd:PRK03918 336 KEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEK-ELEELEKAK-----EEIEEEISK 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 981 REKEISGLWNELDSLKDAVEHQRKKNNDL----REKNWEAMEALASTEKMLQDKVNKTSKERQQQVEAVELEAKEVLKKL 1056
Cdd:PRK03918 410 ITARIGELKKEIKELKKAIEELKKAKGKCpvcgRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVL 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1057 FPKVSVPSNLSYGEWLHGFEKKAKECMAG--TSGSEEVKVLEHKLKEADEMHTLLQLECEK---YKSVLAETEGILQKLQ 1131
Cdd:PRK03918 490 KKESELIKLKELAEQLKELEEKLKKYNLEelEKKAEEYEKLKEKLIKLKGEIKSLKKELEKleeLKKKLAELEKKLDELE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1132 RSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQL 1211
Cdd:PRK03918 570 EELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKEL 649
|
490
....*....|....
gi 118498362 1212 NETLTKLRTEQNER 1225
Cdd:PRK03918 650 EELEKKYSEEEYEE 663
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
448-1281 |
6.74e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 57.44 E-value: 6.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 448 LNKLRQDYARLVNELTEKTGKLQQ-EEVQKKNAEQAATQLKVQLQEAERRwEEVQSYIRKRTAEheaAQQDLQSKFVAKE 526
Cdd:pfam15921 76 IERVLEEYSHQVKDLQRRLNESNElHEKQKFYLRQSVIDLQTKLQEMQME-RDAMADIRRRESQ---SQEDLRNQLQNTV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 527 NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEqkrvnkeESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASvLAEELH 606
Cdd:pfam15921 152 HELEAAKCLKEDMLEDSNTQIEQLRKMMLSH-------EGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRS-LGSAIS 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 607 KVIAEKDKQIKQTEDSLASERDRLTSKEEELKDiqNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLE 686
Cdd:pfam15921 224 KILRELDTEISYLKGRIFPVEDQLEALKSESQN--KIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQL 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 687 EQLQHEISNkmeefkilndQNKALKSEVQKLQTLVSEQpnKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELN 766
Cdd:pfam15921 302 EIIQEQARN----------QNSMYMRQLSDLESTVSQL--RSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFS 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 767 airTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKiKSVEELLEAELLKVANKEktvqlsitskVQELQNLL 846
Cdd:pfam15921 370 ---QESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTG-NSITIDHLRRELDDRNME----------VQRLEALL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 847 KGKEE----QMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRL 922
Cdd:pfam15921 436 KAMKSecqgQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEAT 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 923 EAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSfpphEELLKVISEREKEISGLWNELDSLKDAVEHQ 1002
Cdd:pfam15921 516 NAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEK----DKVIEILRQQIENMTQLVGQHGRTAGAMQVE 591
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1003 RKK-NNDLREKNWEAMEAlasteKMLQDKVNKTSKERQQQVEAVELEAKEVLkklfpkvsvpsnlsygewlhgfekkake 1081
Cdd:pfam15921 592 KAQlEKEINDRRLELQEF-----KILKDKKDAKIRELEARVSDLELEKVKLV---------------------------- 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1082 cmagTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEE---NKWKVKVDESHKTIKQMQSS 1158
Cdd:pfam15921 639 ----NAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMEtttNKLKMQLKSAQSELEQTRNT 714
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1159 FTSSE----QELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHK 1234
Cdd:pfam15921 715 LKSMEgsdgHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEV 794
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 118498362 1235 AQQSLELIQSKI--VKAAGDTTVIENSDVSPETESSEKETMSVSLNQTV 1281
Cdd:pfam15921 795 LRSQERRLKEKVanMEVALDKASLQFAECQDIIQRQEQESVRLKLQHTL 843
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
326-584 |
9.24e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.87 E-value: 9.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 326 ELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMTEKERsnvvITRMKDRIGTLEKEHNVFQNKIHVSYQETQQMQ 405
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEER----RRELEERLEELEEELAELEEELEELEEELEELE 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 406 MKFQQVREQMEAEIAHLKQENGILRDAVsnttnQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQ 485
Cdd:COG1196 344 EELEEAEEELEEAEAELAEAEEALLEAE-----AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLER 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 486 LKVQLQEAERRWEEVqsyiRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEE 565
Cdd:COG1196 419 LEEELEELEEALAEL----EEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLL 494
|
250
....*....|....*....
gi 118498362 566 SLQMQVQDILEQNEALKAQ 584
Cdd:COG1196 495 LLLEAEADYEGFLEGVKAA 513
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
412-1038 |
2.08e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.92 E-value: 2.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 412 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAelnkLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQ 491
Cdd:PTZ00121 1237 KDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAA----IKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAE 1312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 492 EAeRRWEEVQSYIRKRTAEHEAAQQDLQSKfvAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRvnKEESLQMQV 571
Cdd:PTZ00121 1313 EA-KKADEAKKKAEEAKKKADAAKKKAEEA--KKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK--KADAAKKKA 1387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 572 QDILEQNEALKA--QIQQFHSQIAAQTSASVLAEELHKVIAEK---DKQIKQTEDslASERDRLTSKEEELKDIQNMNfl 646
Cdd:PTZ00121 1388 EEKKKADEAKKKaeEDKKKADELKKAAAAKKKADEAKKKAEEKkkaDEAKKKAEE--AKKADEAKKKAEEAKKAEEAK-- 1463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 647 LKAEVQKLQALANEQAAAAHELEKMQQSVyvKDDKIRLLEEQLQHEISNKMEEFKILNDQNKAlkSEVQKLQTLVSEQPN 726
Cdd:PTZ00121 1464 KKAEEAKKADEAKKKAEEAKKADEAKKKA--EEAKKKADEAKKAAEAKKKADEAKKAEEAKKA--DEAKKAEEAKKADEA 1539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 727 KDVVEQMEKCIQEKDEKLKTVEELLEtglIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEK 806
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKAEEKKK---AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAE 1616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 807 DGKIKSVEELLEAELLKVANKEKTVQLSITSKVQELQnllkgKEEQMNTMKAV-----LEEKEKDLANTGKWLQDLQEEN 881
Cdd:PTZ00121 1617 EAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELK-----KAEEENKIKAAeeakkAEEDKKKAEEAKKAEEDEKKAA 1691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 882 ESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQN 961
Cdd:PTZ00121 1692 EALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAE 1771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 962 YQQASSFPPHEELL-----KVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTSK 1036
Cdd:PTZ00121 1772 EIRKEKEAVIEEELdeedeKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEK 1851
|
..
gi 118498362 1037 ER 1038
Cdd:PTZ00121 1852 HK 1853
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
379-1061 |
4.16e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 54.69 E-value: 4.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 379 RIGTLEKEHNVFQNKIHVSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQ---SAELNKLRQDY 455
Cdd:TIGR02169 231 EKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIgelEAEIASLERSI 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 456 ARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQS---KFVAKENEVQSL 532
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEvdkEFAETRDELKDY 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 533 HSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEK 612
Cdd:TIGR02169 391 REKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWK---LEQLAADLSKY 467
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 613 DKQIKQTEDSLASERDRLTSKEEELKDiqnmnflLKAEVQKLQALANEQAAAAHELEKMQQSVY---------------- 676
Cdd:TIGR02169 468 EQELYDLKEEYDRVEKELSKLQRELAE-------AEAQARASEERVRGGRAVEEVLKASIQGVHgtvaqlgsvgeryata 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 677 -------------VKDDKI--RLLEEQLQHEIS-------NKMEEFKILNDQnKALKSEVQKLQTLVSEQPNKD------ 728
Cdd:TIGR02169 541 ievaagnrlnnvvVEDDAVakEAIELLKRRKAGratflplNKMRDERRDLSI-LSEDGVIGFAVDLVEFDPKYEpafkyv 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 729 -----VVEQMEKC-------------------------------------------IQEKDEKLKTVEELLETGLIQVAT 760
Cdd:TIGR02169 620 fgdtlVVEDIEAArrlmgkyrmvtlegelfeksgamtggsraprggilfsrsepaeLQRLRERLEGLKRELSSLQSELRR 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 761 KEEELNAIRTENSSLTKEVQDLKAKQN----DQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKT---VQL 833
Cdd:TIGR02169 700 IENRLDELSQELSDASRKIGEIEKEIEqleqEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDlhkLEE 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 834 SIT--------SKVQELQNLLKGKEEQMNTMKAVLEEKEKDL-------ANTGKWLQDLQEENESLKAHVQEVAQhnlKE 898
Cdd:TIGR02169 780 ALNdlearlshSRIPEIQAELSKLEEEVSRIEARLREIEQKLnrltlekEYLEKEIQELQEQRIDLKEQIKSIEK---EI 856
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 899 ASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVI 978
Cdd:TIGR02169 857 ENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEI 936
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 979 SEREKEISGLWNELDSLKDAVEHQRKKNNDLR---EKNWEAMEALASTEKM---LQDKVNKTSKER---QQQVEAVELEA 1049
Cdd:TIGR02169 937 EDPKGEDEEIPEEELSLEDVQAELQRVEEEIRalePVNMLAIQEYEEVLKRldeLKEKRAKLEEERkaiLERIEEYEKKK 1016
|
810
....*....|..
gi 118498362 1050 KEVLKKLFPKVS 1061
Cdd:TIGR02169 1017 REVFMEAFEAIN 1028
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
463-1269 |
5.09e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 54.30 E-value: 5.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 463 TEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEvqsyIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLtdtlvs 542
Cdd:TIGR02169 205 REREKAERYQALLKEKREYEGYELLKEKEALERQKEA----IERQLASLEEELEKLTEEISELEKRLEEIEQLL------ 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 543 kQQLEQRLMQLMESEQKRVNKE-ESLQMQVQDILEQNEALKAQIQQfhsqiaaqtsasvLAEELHKVIAEKDK---QIKQ 618
Cdd:TIGR02169 275 -EELNKKIKDLGEEEQLRVKEKiGELEAEIASLERSIAEKERELED-------------AEERLAKLEAEIDKllaEIEE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 619 TEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISNKME 698
Cdd:TIGR02169 341 LEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 699 EFKILNDQNKALKSEVQKLQTlvseqpnkdVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKE 778
Cdd:TIGR02169 421 ELADLNAAIAGIEAKINELEE---------EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRE 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 779 VQDLKAK----QNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKV----ANKEKTVQLSITSKVQELQNLLKGKE 850
Cdd:TIGR02169 492 LAEAEAQarasEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIevaaGNRLNNVVVEDDAVAKEAIELLKRRK 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 851 E------QMNTMKAVLEEKEKdLANTG--KWLQDLQEENESLKAHVQEVAQHNL--------KEASSASQFEELEIVLKE 914
Cdd:TIGR02169 572 AgratflPLNKMRDERRDLSI-LSEDGviGFAVDLVEFDPKYEPAFKYVFGDTLvvedieaaRRLMGKYRMVTLEGELFE 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 915 KENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQ-QNYQQASSFppheELLKVISEREKEISGLWNELD 993
Cdd:TIGR02169 651 KSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSeLRRIENRLD----ELSQELSDASRKIGEIEKEIE 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 994 SLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQDkVNKTSKERQQQVEAVELEAKEVLKKLfpkvsvpsnlsygewlh 1073
Cdd:TIGR02169 727 QLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE-LEARIEELEEDLHKLEEALNDLEARL----------------- 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1074 gfekkakecmagtsGSEEVKVLEHKLKEADEMHTllqleceKYKSVLAETEGILQKLQRSVEQEENKWKVKVDEshktik 1153
Cdd:TIGR02169 789 --------------SHSRIPEIQAELSKLEEEVS-------RIEARLREIEQKLNRLTLEKEYLEKEIQELQEQ------ 841
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1154 qmqssftssEQELERLRSENKD-IENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDL 1232
Cdd:TIGR02169 842 ---------RIDLKEQIKSIEKeIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQI 912
|
810 820 830
....*....|....*....|....*....|....*..
gi 118498362 1233 HKAQQSLELIQSKIVKAAGDTTVIENSDVSPETESSE 1269
Cdd:TIGR02169 913 EKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE 949
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
837-1259 |
5.60e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.30 E-value: 5.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 837 SKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKE 916
Cdd:PRK03918 186 KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 917 NELKRLEAMLKERESDLSSKTQLLQDVQDENKL--FKSQIEQLKQQNYQQASSFpphEELLKVISEREKEISGLWNELDS 994
Cdd:PRK03918 266 ERIEELKKEIEELEEKVKELKELKEKAEEYIKLseFYEEYLDELREIEKRLSRL---EEEINGIEERIKELEEKEERLEE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 995 LKDAVEHQRKKNNDLREKNW---EAMEALASTEKMLQDKVNKTSKERQQQVEAVELEAKEVLKKLFPKVSVPSNLsygEW 1071
Cdd:PRK03918 343 LKKKLKELEKRLEELEERHElyeEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGEL---KK 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1072 LHGFEKKAKECMAGTSG---------------------SEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKL 1130
Cdd:PRK03918 420 EIKELKKAIEELKKAKGkcpvcgrelteehrkelleeyTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLK 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1131 Q-----RSVEQEENKWKV-KVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEV 1204
Cdd:PRK03918 500 ElaeqlKELEEKLKKYNLeELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKEL 579
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 118498362 1205 RELK----AQLNETLTKLRT---EQNERQKVAGDLHKAQQSLELIQSKIVKAAGDTTVIENS 1259
Cdd:PRK03918 580 EELGfesvEELEERLKELEPfynEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKR 641
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
593-960 |
1.28e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.14 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 593 AAQTSASVLAEElhKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQ 672
Cdd:TIGR02168 665 SAKTNSSILERR--REIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEV 742
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 673 QSVYVKDDKIRLLEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVseqpnKDVVEQMEKCIQEKDEKLKTVEELLE 752
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQI-----EQLKEELKALREALDELRAELTLLNE 817
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 753 TGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVI--HEKDGKIKSVEELLEAELLKVANKEK- 829
Cdd:TIGR02168 818 EAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIeeLESELEALLNERASLEEALALLRSELe 897
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 830 ---TVQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTgkwlqdLQEENESLKAHVQEVAQHNLKEASSASQFE 906
Cdd:TIGR02168 898 elsEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNL------QERLSEEYSLTLEEAEALENKIEDDEEEAR 971
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 118498362 907 ELEIVLKEKENEL---------------KRLEAMLKERESDLSSKTQLLQDVQDENK----LFKSQIEQLKQQ 960
Cdd:TIGR02168 972 RRLKRLENKIKELgpvnlaaieeyeelkERYDFLTAQKEDLTEAKETLEEAIEEIDReareRFKDTFDQVNEN 1044
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
509-1187 |
1.40e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 53.05 E-value: 1.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 509 AEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALkAQIQQF 588
Cdd:TIGR00618 194 GKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLR-ARIEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 589 HSQIAAQTSASVLAEELHKV--IAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAH 666
Cdd:TIGR00618 273 RAQEAVLEETQERINRARKAapLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHS 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 667 ELEKMQQSVYVKDDKIRLLEEQ--LQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEQPNKDVVEQMEKciQEKDEKL 744
Cdd:TIGR00618 353 QEIHIRDAHEVATSIREISCQQhtLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQ--GQLAHAK 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 745 KTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDqvsfaslvEELKKVIHEKDGKIKSVEELLEAELLKV 824
Cdd:TIGR00618 431 KQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQ--------LQTKEQIHLQETRKKAVVLARLLELQEE 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 825 ANKEKTVQLSITSKVQELQNLlKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQ 904
Cdd:TIGR00618 503 PCPLCGSCIHPNPARQDIDNP-GPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNR 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 905 F-EELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDE-NKLFKSQIEQLKQQNYQQASSfPPHEELLKVISERE 982
Cdd:TIGR00618 582 SkEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEqDLQDVRLHLQQCSQELALKLT-ALHALQLTLTQERV 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 983 KEISGLWNELDSLK--------DAVEHQRKKNNDLREKNWEAMEALASTEKMLQD------KVNKTSKERQQQVEAVELE 1048
Cdd:TIGR00618 661 REHALSIRVLPKELlasrqlalQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEydrefnEIENASSSLGSDLAAREDA 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1049 AKEVLKKLFPKVSVPSNLSYGEWLHGFEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQ 1128
Cdd:TIGR00618 741 LNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILN 820
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 118498362 1129 KLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLE 1187
Cdd:TIGR00618 821 LQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKLN 879
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1091-1301 |
2.09e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.25 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1091 EVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLR 1170
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1171 SENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAA 1250
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 118498362 1251 GDTTVIENSDVSPETESSEKETMSVSLNQTVTQLQQLLQAVNQQLTKEKEH 1301
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA 443
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
305-1292 |
2.43e-06 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 52.36 E-value: 2.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 305 VDLLK--EKSGVIQDALKKSSKGELTtliHQLQEKDKLLAAVKEDAAAT-KDRCKQLTQEMMTEKERSNVVITRMKDRIG 381
Cdd:TIGR01612 623 IDLKKiiENNNAYIDELAKISPYQVP---EHLKNKDKIYSTIKSELSKIyEDDIDALYNELSSIVKENAIDNTEDKAKLD 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 382 TLekehnvfQNKIHVSYQETQQMQMkfqqvrEQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNE 461
Cdd:TIGR01612 700 DL-------KSKIDKEYDKIQNMET------ATVELHLSNIENKKNELLDIIVEIKKHIHGEINKDLNKILEDFKNKEKE 766
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 462 LTEKTGKLQQEEVQKKNAEQAATQLKVQL-----------QEAERRWEEVQSYIR----------KRTAEHEAAQQDLQS 520
Cdd:TIGR01612 767 LSNKINDYAKEKDELNKYKSKISEIKNHYndqinidnikdEDAKQNYDKSKEYIKtisikedeifKIINEMKFMKDDFLN 846
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 521 K---FVAKEN----EVQSLHSKLTDtLVSKQQLEQRLMQLMESEqKRVNKEESLqmqvqdILEQNEALKAQIQQFHSQia 593
Cdd:TIGR01612 847 KvdkFINFENnckeKIDSEHEQFAE-LTNKIKAEISDDKLNDYE-KKFNDSKSL------INEINKSIEEEYQNINTL-- 916
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 594 aqtsasvlaeelhKVIAEKDKQIKQTEDSLASERDRLTSKEEEL----KDIQNMNFLLKAEVQKLQALANEQAAaahELE 669
Cdd:TIGR01612 917 -------------KKVDEYIKICENTKESIEKFHNKQNILKEILnkniDTIKESNLIEKSYKDKFDNTLIDKIN---ELD 980
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 670 KMqqsvyvkddkirLLEEQLQHEISNKMEEFKILNDQNKALKSevQKLQTLVSE-QPNKDVVEQMEKCIQEKDEKLKTVE 748
Cdd:TIGR01612 981 KA------------FKDASLNDYEAKNNELIKYFNDLKANLGK--NKENMLYHQfDEKEKATNDIEQKIEDANKNIPNIE 1046
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 749 ELLETGLIQVAtkEEELNAIRTENSSLTKEVqdLKAKQNDQVSFASLVEELKkvIHEKDGKIKSVEELLEAELLKVANKE 828
Cdd:TIGR01612 1047 IAIHTSIYNII--DEIEKEIGKNIELLNKEI--LEEAEINITNFNEIKEKLK--HYNFDDFGKEENIKYADEINKIKDDI 1120
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 829 KTVQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEkDLANTGKWLQDLQE----------------------------- 879
Cdd:TIGR01612 1121 KNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLE-DVADKAISNDDPEEiekkienivtkidkkkniydeikkllnei 1199
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 880 -ENESLKAHVQEVAQHNLKEASSASQF--EELEIVLKEKENELKRLEAML------KERESDLSSKTQLLQDVQDENKLF 950
Cdd:TIGR01612 1200 aEIEKDKTSLEEVKGINLSYGKNLGKLflEKIDEEKKKSEHMIKAMEAYIedldeiKEKSPEIENEMGIEMDIKAEMETF 1279
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 951 ------------------------KSQIEQLKQQNYQQASSFPPHEELLKVISEREK----------EISGLWN--ELDS 994
Cdd:TIGR01612 1280 nishdddkdhhiiskkhdenisdiREKSLKIIEDFSEESDINDIKKELQKNLLDAQKhnsdinlylnEIANIYNilKLNK 1359
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 995 LKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQD-KVNKTSKERQQQVEAVeLEAKEVlKKLFPKVSVPSN--LSYGEW 1071
Cdd:TIGR01612 1360 IKKIIDEVKEYTKEIEENNKNIKDELDKSEKLIKKiKDDINLEECKSKIEST-LDDKDI-DECIKKIKELKNhiLSEESN 1437
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1072 LHGFEKKAKEcmagtsGSEEVKVLEHKLKEADEmHTLLQLECEKYKSVlAETEGILQKLQRSVEQEeNKWKVKVDESHKT 1151
Cdd:TIGR01612 1438 IDTYFKNADE------NNENVLLLFKNIEMADN-KSQHILKIKKDNAT-NDHDFNINELKEHIDKS-KGCKDEADKNAKA 1508
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1152 IKQMQSSFTSSEQELERLRSENKDIEnlrrerehLEMELEKAEMERSTYVTEVRELKAQL----NETLTKLRTEQNERQK 1227
Cdd:TIGR01612 1509 IEKNKELFEQYKKDVTELLNKYSALA--------IKNKFAKTKKDSEIIIKEIKDAHKKFileaEKSEQKIKEIKKEKFR 1580
|
1050 1060 1070 1080 1090 1100 1110
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 118498362 1228 VAGDLHK----------AQQSLELIQSKIVKAAGDTTVIenSDVSPETESSEKETMSVSLNQTVTQLQQLLQAVN 1292
Cdd:TIGR01612 1581 IEDDAAKndksnkaaidIQLSLENFENKFLKISDIKKKI--NDCLKETESIEKKISSFSIDSQDTELKENGDNLN 1653
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
430-1046 |
3.27e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.58 E-value: 3.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 430 RDAVSNTTNQLESKQSAE----LNKLRQdyarlvnELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQsyir 505
Cdd:PRK02224 186 RGSLDQLKAQIEEKEEKDlherLNGLES-------ELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELE---- 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 506 krtaEHEAAQQDLQSKFVAKENEVQSLHSKLTDtlvskqqLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQI 585
Cdd:PRK02224 255 ----TLEAEIEDLRETIAETEREREELAEEVRD-------LRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRD 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 586 qqfhsqiaaqtsasvlaEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAA 665
Cdd:PRK02224 324 -----------------EELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEI 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 666 HELekmqqsvyvkDDKIRLLEEQLqheiSNKMEEFKILNDQNKALKSEVQKLQTLVSEqpnkdvveqMEKCIQEKDEKLK 745
Cdd:PRK02224 387 EEL----------EEEIEELRERF----GDAPVDLGNAEDFLEELREERDELREREAE---------LEATLRTARERVE 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 746 TVEELLETGL-------IQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKV---IHEKDGKIKSVEE 815
Cdd:PRK02224 444 EAEALLEAGKcpecgqpVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAedrIERLEERREDLEE 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 816 LLEAELLKVANKEKTVQlSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAqhn 895
Cdd:PRK02224 524 LIAERRETIEEKRERAE-ELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLA--- 599
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 896 lKEASSASQFEELeivlKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSfpphEELL 975
Cdd:PRK02224 600 -AIADAEDEIERL----REKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQVE----EKLD 670
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 118498362 976 KVISER---EKEISGLWNELDSLkdavEHQRKKNNDLREKNwEAMEALASTEKMLQDKVNKTSKE-RQQQVEAVE 1046
Cdd:PRK02224 671 ELREERddlQAEIGAVENELEEL----EELRERREALENRV-EALEALYDEAEELESMYGDLRAElRQRNVETLE 740
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
897-1252 |
5.30e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.09 E-value: 5.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 897 KEASSASQFEELEIVLKEKENEL-----KRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQnyqqassfppH 971
Cdd:COG1196 207 RQAEKAERYRELKEELKELEAELlllklRELEAELEELEAELEELEAELEELEAELAELEAELEELRLE----------L 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 972 EELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEkmlqdkvnktskERQQQVEAVELEAKE 1051
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE------------EELEELEEELEELEE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1052 VLKKLfpkvsvpsnlsygewlhgfekkakecmagtsgSEEVKVLEHKLKEADEmhtLLQLECEKYKSVLAETEGILQKLQ 1131
Cdd:COG1196 345 ELEEA--------------------------------EEELEEAEAELAEAEE---ALLEAEAELAEAEEELEELAEELL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1132 RSVEQEENKwkvkvdesHKTIKQMQSSFTSSEQELERLRSE----NKDIENLRREREHLEMELEKAEMERSTYVTEVREL 1207
Cdd:COG1196 390 EALRAAAEL--------AAQLEELEEAEEALLERLERLEEEleelEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 118498362 1208 KAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAAGD 1252
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGF 506
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
666-932 |
6.11e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 50.70 E-value: 6.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 666 HELEKMQqsvyVKDDKIRLLEEQLQHEISNKMEEFKILNdqnkALKSEVQKLQTLVSEQpNKDVVEQMEKCIQEKDEKLK 745
Cdd:PRK05771 26 HELGVVH----IEDLKEELSNERLRKLRSLLTKLSEALD----KLRSYLPKLNPLREEK-KKVSVKSLEELIKDVEEELE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 746 TVEElletgliQVATKEEELNAIRTENSSLTKEVQDLKakqndqvSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVA 825
Cdd:PRK05771 97 KIEK-------EIKELEEEISELENEIKELEQEIERLE-------PWGNFDLDLSLLLGFKYVSVFVGTVPEDKLEELKL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 826 NKEKTVQLSITSKVQE---LQNLLKGKEEQMNTMKAVLEEKEKDLANTGK---WLQDLQEENESLKAHVQEVaQHNLKEa 899
Cdd:PRK05771 163 ESDVENVEYISTDKGYvyvVVVVLKELSDEVEEELKKLGFERLELEEEGTpseLIREIKEELEEIEKERESL-LEELKE- 240
|
250 260 270
....*....|....*....|....*....|....
gi 118498362 900 sSASQFEELEIVLKEK-ENELKRLEAMLKERESD 932
Cdd:PRK05771 241 -LAKKYLEELLALYEYlEIELERAEALSKFLKTD 273
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
396-1040 |
6.82e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 50.82 E-value: 6.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 396 VSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRdAVSNTTNQLESKQSaELNKLRQDYARLVNELteKTGKLQQEEVQ 475
Cdd:TIGR00606 207 MELKYLKQYKEKACEIRDQITSKEAQLESSREIVK-SYENELDPLKNRLK-EIEHNLSKIMKLDNEI--KALKSRKKQME 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 476 KKNAEQAATQLKVqLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLME 555
Cdd:TIGR00606 283 KDNSELELKMEKV-FQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQE 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 556 SEQKRVNKEESLQMQVQ-DILEQNEALKAQIQQFHSQIAAQTS-----ASVLAEELHKVIAEKDKQIKQTED-------S 622
Cdd:TIGR00606 362 HIRARDSLIQSLATRLElDGFERGPFSERQIKNFHTLVIERQEdeaktAAQLCADLQSKERLKQEQADEIRDekkglgrT 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 623 LASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQS----------VYVKDDKIRLLE------ 686
Cdd:TIGR00606 442 IELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNsltetlkkevKSLQNEKADLDRklrkld 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 687 ---EQLQHEISNKMEEFKILNDQNKA----LKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVA 759
Cdd:TIGR00606 522 qemEQLNHHTTTRTQMEMLTKDKMDKdeqiRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELA 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 760 TKEEELNAIRTENSSLTKEVQDLKAK-------QNDQVSFASLVEELKKV-----------------IHEKDGKIKSV-- 813
Cdd:TIGR00606 602 SLEQNKNHINNELESKEEQLSSYEDKlfdvcgsQDEESDLERLKEEIEKSskqramlagatavysqfITQLTDENQSCcp 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 814 ----EELLEAELLKVANKEKTVQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQ 889
Cdd:TIGR00606 682 vcqrVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQ 761
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 890 EVAQH-----------NLKEASS------ASQFEELEIVLKEKENELKRLEAMLKERESDLSSKT--------------- 937
Cdd:TIGR00606 762 RLKNDieeqetllgtiMPEEESAkvcltdVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQvnqekqekqheldtv 841
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 938 --------QLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDL 1009
Cdd:TIGR00606 842 vskielnrKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKD 921
|
730 740 750
....*....|....*....|....*....|.
gi 118498362 1010 REKNWEAMEALASTEKMLQDKVNKTSKERQQ 1040
Cdd:TIGR00606 922 QQEKEELISSKETSNKKAQDKVNDIKEKVKN 952
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
874-1244 |
8.77e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.15 E-value: 8.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 874 LQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAML---------KERESDLSSKTQLLQDVQ 944
Cdd:COG4717 73 LKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLqllplyqelEALEAELAELPERLEELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 945 DENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISER-EKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALAST 1023
Cdd:COG4717 153 ERLEELRELEEELEELEAELAELQEELEELLEQLSLAtEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1024 EKML--QDKVNKTSKERQQQVEAVELEAKEVLKKLFPKVSVP------SNLSYGEWLHGFEKKAKECMAGTSGSEEVKVL 1095
Cdd:COG4717 233 ENELeaAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTiagvlfLVLGLLALLFLLLAREKASLGKEAEELQALPA 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1096 EHKLKEADEMHTLLQL---ECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQ-MQSSFTSSEQELERLRS 1171
Cdd:COG4717 313 LEELEEEELEELLAALglpPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAlLAEAGVEDEEELRAALE 392
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 118498362 1172 ENKDIENLRREREHLEMELEKA--EMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQS 1244
Cdd:COG4717 393 QAEEYQELKEELEELEEQLEELlgELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEE 467
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
399-781 |
2.31e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 48.90 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 399 QETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNttnqLESKQSAelNKLRQDYARLVNELTEKTGKLQQEEVQKKN 478
Cdd:PRK10929 61 KGSLERAKQYQQVIDNFPKLSAELRQQLNNERDEPRS----VPPNMST--DALEQEILQVSSQLLEKSRQAQQEQDRARE 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 479 AEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQqdlQSKFVAKENEVQSLHSKLtdtlvskQQLEqrLMQLMESeq 558
Cdd:PRK10929 135 ISDSLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLA---QAQLTALQAESAALKALV-------DELE--LAQLSAN-- 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 559 krvNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQ---------TSASVLAE---ELHKVIAEKDKQIKQTEDSL--- 623
Cdd:PRK10929 201 ---NRQELARLRSELAKKRSQQLDAYLQALRNQLNSQrqreaeralESTELLAEqsgDLPKSIVAQFKINRELSQALnqq 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 624 ASERDRLTSKE-----EELKDIQNMNFL----------------LKAEVQKLQalaneqaaaahELEKMQQsvyVKDDKI 682
Cdd:PRK10929 278 AQRMDLIASQQrqaasQTLQVRQALNTLreqsqwlgvsnalgeaLRAQVARLP-----------EMPKPQQ---LDTEMA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 683 RLLEEQLQHEisnkmeefKILNDQNKALKSEVQKLQTLVSEQpnkdvveqmeKCIQekDEKLKTVEELLETGLIQVATKE 762
Cdd:PRK10929 344 QLRVQRLRYE--------DLLNKQPQLRQIRQADGQPLTAEQ----------NRIL--DAQLRTQRELLNSLLSGGDTLI 403
|
410 420
....*....|....*....|..
gi 118498362 763 EELNAIRTENSSLT---KEVQD 781
Cdd:PRK10929 404 LELTKLKVANSQLEdalKEVNE 425
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
875-1210 |
2.65e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 2.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 875 QDLQEENESLKAhvqEVAQHNLKEASSasQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDEnklfksqI 954
Cdd:COG1196 216 RELKEELKELEA---ELLLLKLRELEA--ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELE-------L 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 955 EQLKQQNYQQASSfppHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKnweamEALASTEKMLQDKVNKT 1034
Cdd:COG1196 284 EEAQAEEYELLAE---LARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE-----LEELEEELEEAEEELEE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1035 SKERQQQVEAVELEAKEVLKklfpkvsvpsnlsygEWLHGFEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECE 1114
Cdd:COG1196 356 AEAELAEAEEALLEAEAELA---------------EAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1115 KYKSVLAETEGILQKL---QRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELE 1191
Cdd:COG1196 421 EELEELEEALAELEEEeeeEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE 500
|
330
....*....|....*....
gi 118498362 1192 KAEMERSTYVTEVRELKAQ 1210
Cdd:COG1196 501 ADYEGFLEGVKAALLLAGL 519
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
411-641 |
4.06e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.09 E-value: 4.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 411 VREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDyarlvNELTEKTGKLQQEEVQKKNAEQAATQLKVQL 490
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAE-AALEEFRQK-----NGLVDLSEEAKLLLQQLSELESQLAEARAEL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 491 QEAERRWEEVQSYIRKRTAEHEAAQQDlqskfvakeNEVQSLHSKLtdtlvskQQLEQRLMQLmeseQKRVNKEESlqmQ 570
Cdd:COG3206 236 AEAEARLAALRAQLGSGPDALPELLQS---------PVIQQLRAQL-------AELEAELAEL----SARYTPNHP---D 292
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 118498362 571 VQDILEQNEALKAQIQQFHSQIAAQTSASVlaeelhKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQ 641
Cdd:COG3206 293 VIALRAQIAALRAQLQQEAQRILASLEAEL------EALQAREASLQAQLAQLEARLAELPELEAELRRLE 357
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
730-1299 |
4.61e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 48.15 E-value: 4.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 730 VEQMEKCIQEKDEKLKTVEELLETGLiqvatkEEELNAIRTENSSLTKEVQDLKAKQNdqvsfasLVEELKKVIHEKDGK 809
Cdd:COG5022 877 VELAERQLQELKIDVKSISSLKLVNL------ELESEIIELKKSLSSDLIENLEFKTE-------LIARLKKLLNNIDLE 943
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 810 iksVEELLEAELLKVANKEKTVQLSITSKVQELQNLLKGKEE---QMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKA 886
Cdd:COG5022 944 ---EGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTIlvrEGNKANSELKNFKKELAELSKQYGALQESTKQLKE 1020
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 887 HVQEVAQHN-----LKEASSASQ----FEELEIVLKEKENEL-KRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQ 956
Cdd:COG5022 1021 LPVEVAELQsaskiISSESTELSilkpLQKLKGLLLLENNQLqARYKALKLRRENSLLDDKQLYQLESTENLLKTINVKD 1100
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 957 LKQQNYQQASsfpPHEELLKVISE-----REKEISGLWNE-LDSLKDAVEHQRKKNNDLREKNWEA-MEALASTekmlqD 1029
Cdd:COG5022 1101 LEVTNRNLVK---PANVLQFIVAQmiklnLLQEISKFLSQlVNTLEPVFQKLSVLQLELDGLFWEAnLEALPSP-----P 1172
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1030 KVNKTSKERQQQVEAVELEAK---EVLKKLFPKVSVPSNLSYGEWLHGFEKK--AKECMAGTSGSEevkvlehKLKEADE 1104
Cdd:COG5022 1173 PFAALSEKRLYQSALYDEKSKlssSEVNDLKNELIALFSKIFSGWPRGDKLKklISEGWVPTEYST-------SLKGFNN 1245
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1105 MHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTS---SEQELERLRSENKDIENL-- 1179
Cdd:COG5022 1246 LNKKFDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRtkaSSLRWKSATEVNYNSEELdd 1325
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1180 ---RREREHLEMELEkaEMERSTYVTEVRELKAQLNETLTKLRTEQN--ERQKVAGDLHKAQQSLEL---IQSKIV---- 1247
Cdd:COG5022 1326 wcrEFEISDVDEELE--ELIQAVKVLQLLKDDLNKLDELLDACYSLNpaEIQNLKSRYDPADKENNLpkeILKKIEalli 1403
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 118498362 1248 --KAAGDTTVIENSDVSPETESSEKETMsVSLNQTVTQLQQLLQAVNQQLTKEK 1299
Cdd:COG5022 1404 kqELQLSLEGKDETEVHLSEIFSEEKSL-ISLDRNSIYKEEVLSSLSALLTKEK 1456
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
554-910 |
5.22e-05 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 47.54 E-value: 5.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 554 MESEQKR-VNKEESLQMQVQDILEQNEALKAQIQQfHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLASErDRLTS 632
Cdd:PLN03229 413 VDPERKVnMKKREAVKTPVRELEGEVEKLKEQILK-AKESSSKPSELALNEMIEKLKKEIDLEYTEAVIAMGLQ-ERLEN 490
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 633 KEEELKDI----QNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIR---LLE-----EQLQHEISNKMEEF 700
Cdd:PLN03229 491 LREEFSKAnsqdQLMHPVLMEKIEKLKDEFNKRLSRAPNYLSLKYKLDMLNEFSRakaLSEkkskaEKLKAEINKKFKEV 570
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 701 KI---LNDQNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELnAIRTENSSLTK 777
Cdd:PLN03229 571 MDrpeIKEKMEALKAEVASSGASSGDELDDDLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKDT-AEQTPPPNLQE 649
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 778 EVQDLKAKQNDQVSFASLVEELKKVIHEkdgkiksveelleaELLKVANKEKTVQLSITSKVQELQNLLKGK-EEQMNTM 856
Cdd:PLN03229 650 KIESLNEEINKKIERVIRSSDLKSKIEL--------------LKLEVAKASKTPDVTEKEKIEALEQQIKQKiAEALNSS 715
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 118498362 857 kAVLEEKEKDLANTGKWLQDLQEENESLKahvqevaQHNLKEASSASQFEELEI 910
Cdd:PLN03229 716 -ELKEKFEELEAELAAARETAAESNGSLK-------NDDDKEEDSKEDGSRVEV 761
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
534-1056 |
5.95e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.75 E-value: 5.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 534 SKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKD 613
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 614 KQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKaEVQKLQALANEQAAAAHELEKMQQSVyvkDDKIRLLEEQLQhEI 693
Cdd:PRK03918 259 EKIRELEERIEELKKEIEELEEKVKELKELKEKAE-EYIKLSEFYEEYLDELREIEKRLSRL---EEEINGIEERIK-EL 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 694 SNKMEEFKILNDQNKALKSEVQKLQTLVSE-QPNKDVVEQMEKCIQE-KDEKLKTVEELLETGLIQVATKEEELNAIRTE 771
Cdd:PRK03918 334 EEKEERLEELKKKLKELEKRLEELEERHELyEEAKAKKEELERLKKRlTGLTPEKLEKELEELEKAKEEIEEEISKITAR 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 772 NSSLTKEVQDLK--------AKQNDQVSFASLVEELKK-VIHEKDGKIKSVEELLEAELLKV--ANKEKTVQLSITSKVQ 840
Cdd:PRK03918 414 IGELKKEIKELKkaieelkkAKGKCPVCGRELTEEHRKeLLEEYTAELKRIEKELKEIEEKErkLRKELRELEKVLKKES 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 841 ELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELK 920
Cdd:PRK03918 494 ELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELA 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 921 RLEAMLKER----ESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLK 996
Cdd:PRK03918 574 ELLKELEELgfesVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELE 653
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 118498362 997 ---DAVEHQRKKNNDLR-EKNWEAMEALASTEKMLQDKVNKTSKERQQQVEAVElEAKEVLKKL 1056
Cdd:PRK03918 654 kkySEEEYEELREEYLElSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE-KAKKELEKL 716
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
316-532 |
6.30e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 6.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 316 QDALKKSSKGELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEmmtekersnvvITRMKDRIGTLEKEHNVFQNKIH 395
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERR-----------IAALARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 396 VSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAV---------SNTTNQLESKQSAELNKLRQDYARLVNELTEKT 466
Cdd:COG4942 87 ELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALllspedfldAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 118498362 467 GKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
838-1246 |
1.06e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 838 KVQELQNLLKGKEEQmntmKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHnLKEASSASQFEELEIVLKEKEN 917
Cdd:COG4717 72 ELKELEEELKEAEEK----EEEYAELQEELEELEEELEELEAELEELREELEKLEKL-LQLLPLYQELEALEAELAELPE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 918 ELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFP-PHEELLKVISEREKEISGLWNELDSLK 996
Cdd:COG4717 147 RLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAeELEELQQRLAELEEELEEAQEELEELE 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 997 DAVEH--QRKKNNDLREKNWEAME------------------------------------ALASTEKMLQDKVNKTSKER 1038
Cdd:COG4717 227 EELEQleNELEAAALEERLKEARLllliaaallallglggsllsliltiagvlflvlgllALLFLLLAREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1039 QQQVEAVELEAKEVLKKLFPKVSVPSNLSYGEWLHGFEKkakecmagtsgSEEVKVLEHKLKEADEMHTLLQLEcEKYKS 1118
Cdd:COG4717 307 LQALPALEELEEEELEELLAALGLPPDLSPEELLELLDR-----------IEELQELLREAEELEEELQLEELE-QEIAA 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1119 VLAET-----EGILQKLQRSVEQEENKWKVKVDEShktikQMQSSFTSSEQELERLrsenkDIENLRREREHLEMELEKA 1193
Cdd:COG4717 375 LLAEAgvedeEELRAALEQAEEYQELKEELEELEE-----QLEELLGELEELLEAL-----DEEELEEELEELEEELEEL 444
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 118498362 1194 EMERSTYVTEVRELKAQLN-----ETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKI 1246
Cdd:COG4717 445 EEELEELREELAELEAELEqleedGELAELLQELEELKAELRELAEEWAALKLALELL 502
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
442-953 |
1.34e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 46.25 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 442 SKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQkknAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSK 521
Cdd:pfam05483 172 KKYEYEREETRQVYMDLNNNIEKMILAFEELRVQ---AENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 522 FVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDIleqnealKAQIQQ-FHSQIAAQTSASV 600
Cdd:pfam05483 249 ITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDI-------KMSLQRsMSTQKALEEDLQI 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 601 LAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNmnfLLKAEVQKLQAlaneqaaaahelekmqqsvyvKDD 680
Cdd:pfam05483 322 ATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEE---LLRTEQQRLEK---------------------NED 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 681 KIRLLEEQLQHEISNKMEEFKILNDQnkalKSEVQKLQTLVSE-QPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVA 759
Cdd:pfam05483 378 QLKIITMELQKKSSELEEMTKFKNNK----EVELEELKKILAEdEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIH 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 760 TKEEELNAIRTENSSLTKEVQDLKAKQNDQvsfaslveelkkvihekdgKIKSVEELLEAELLKVANKEKTVQLSITS-- 837
Cdd:pfam05483 454 DLEIQLTAIKTSEEHYLKEVEDLKTELEKE-------------------KLKNIELTAHCDKLLLENKELTQEASDMTle 514
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 838 --KVQELQNLLKGKEEQMNTMKAVLEEKEKDLANtgkwlqDLQEENESLKAHVQEVaqhNLKEASSASQFEELEIVLKEK 915
Cdd:pfam05483 515 lkKHQEDIINCKKQEERMLKQIENLEEKEMNLRD------ELESVREEFIQKGDEV---KCKLDKSEENARSIEYEVLKK 585
|
490 500 510
....*....|....*....|....*....|....*...
gi 118498362 916 ENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQ 953
Cdd:pfam05483 586 EKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKK 623
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
906-1003 |
1.39e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.92 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 906 EELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQassfppHEELLKVISEREKE- 984
Cdd:PRK12704 71 NEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKK------EEELEELIEEQLQEl 144
|
90 100
....*....|....*....|....*..
gi 118498362 985 --ISGLWNE------LDSLKDAVEHQR 1003
Cdd:PRK12704 145 erISGLTAEeakeilLEKVEEEARHEA 171
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
838-1241 |
1.90e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 838 KVQELQNLLKGKEEQMNTMKAVLEEKEKDL--------ANTGKWLQDLQEENESLKAHVQEVAQhnlKEASSASQFEELE 909
Cdd:COG4913 296 ELEELRAELARLEAELERLEARLDALREELdeleaqirGNGGDRLEQLEREIERLERELEERER---RRARLEALLAALG 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 910 IVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKlfkSQIEQLKQQnyqqassfppHEELLKVISEREKEISGLW 989
Cdd:COG4913 373 LPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAE---AALRDLRRE----------LRELEAEIASLERRKSNIP 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 990 NELDSLKDAVEHQ-RKKNNDLR-----------EKNWE-AMEALAST-----------EKMLQDKVNKTSKERQQQVEAV 1045
Cdd:COG4913 440 ARLLALRDALAEAlGLDEAELPfvgelievrpeEERWRgAIERVLGGfaltllvppehYAAALRWVNRLHLRGRLVYERV 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1046 ELEAKEVLKKLFPKVSVPSNLS-----YGEWLHGF------------------EKKA--KECMAGTSGSEEVK------- 1093
Cdd:COG4913 520 RTGLPDPERPRLDPDSLAGKLDfkphpFRAWLEAElgrrfdyvcvdspeelrrHPRAitRAGQVKGNGTRHEKddrrrir 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1094 ---VL----EHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRsvEQEENKWKVKVDESHKTIKQMQSSFTSSEQEL 1166
Cdd:COG4913 600 sryVLgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQE--RREALQRLAEYSWDEIDVASAEREIAELEAEL 677
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 118498362 1167 ERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQnERQKVAGDLHKAQQSLEL 1241
Cdd:COG4913 678 ERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQ-DRLEAAEDLARLELRALL 751
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
951-1299 |
2.03e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 45.89 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 951 KSQIEQLKQQNYQQASSFppheellkviserEKEISGLWNELDSLKDAVEHQRKKNNDL-------REKNWEAMEALAST 1023
Cdd:pfam05557 8 KARLSQLQNEKKQMELEH-------------KRARIELEKKASALKRQLDRESDRNQELqkrirllEKREAEAEEALREQ 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1024 EKMLQ--DKVNKTSKERQQQVEAVELEAKEVLKKLFPKVSvpsnlsygEWLHGFEKKAKECMAGTSGSEEVKVLEHKLKE 1101
Cdd:pfam05557 75 AELNRlkKKYLEALNKKLNEKESQLADAREVISCLKNELS--------ELRRQIQRAELELQSTNSELEELQERLDLLKA 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1102 ADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENkWKVKVdeshKTIKQMQSSFTSSEQELERLRSENKDIENLRR 1181
Cdd:pfam05557 147 KASEAEQLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQ-DSEIV----KNSKSELARIPELEKELERLREHNKHLNENIE 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1182 EREHLEMELE--KAEMERstyVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKaagdttvIENS 1259
Cdd:pfam05557 222 NKLLLKEEVEdlKRKLER---EEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNLRSPEDLSRRIEQ-------LQQR 291
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 118498362 1260 DVSPETESSEKETMSVSLNQTVTQLQQLLQAVNQQLTKEK 1299
Cdd:pfam05557 292 EIVLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLN 331
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
412-621 |
2.19e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 45.98 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 412 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDY-------ARLVN-ELTEKTGKLQQEEVQKKNAEQAA 483
Cdd:NF012221 1564 KERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNALETNGQAQrdaileeSRAVTkELTTLAQGLDALDSQATYAGESG 1643
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 484 TQLKVQLqeAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKlTDTLVskQQLEQRLMQLMESEQKRVNK 563
Cdd:NF012221 1644 DQWRNPF--AGGLLDRVQEQLDDAKKISGKQLADAKQRHVDNQQKVKDAVAK-SEAGV--AQGEQNQANAEQDIDDAKAD 1718
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 118498362 564 EESLQMQVqdILEQNEALKAQIQQFHS----QIAAQTSASVLAEELHKVIAEKdKQIKQTED 621
Cdd:NF012221 1719 AEKRKDDA--LAKQNEAQQAESDANAAandaQSRGEQDASAAENKANQAQADA-KGAKQDES 1777
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
875-1051 |
3.37e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 875 QDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQI 954
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 955 EQLKQQNYQQASSFPP------------------HEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEA 1016
Cdd:COG4942 107 AELLRALYRLGRQPPLalllspedfldavrrlqyLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190
....*....|....*....|....*....|....*.
gi 118498362 1017 MEALASTEKMLQDKVNKTSKER-QQQVEAVELEAKE 1051
Cdd:COG4942 187 RAALEALKAERQKLLARLEKELaELAAELAELQQEA 222
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
468-637 |
4.43e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 4.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 468 KLQQEEVQKKNAEQAAtQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSkfvakENEVQSLHskltdtlvskQQLE 547
Cdd:PRK04863 501 LLRRLREQRHLAEQLQ-QLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDD-----EDELEQLQ----------EELE 564
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 548 QRLMQLmeSEQKRVNKEEslQMQVQDILEQneaLKAQIQQFHSQ----IAAQTSASVLAE-------------ELHKVIA 610
Cdd:PRK04863 565 ARLESL--SESVSEARER--RMALRQQLEQ---LQARIQRLAARapawLAAQDALARLREqsgeefedsqdvtEYMQQLL 637
|
170 180
....*....|....*....|....*..
gi 118498362 611 EKDKQIKQTEDSLASERDRLTSKEEEL 637
Cdd:PRK04863 638 ERERELTVERDELAARKQALDEEIERL 664
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
561-1042 |
5.47e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 5.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 561 VNKEESLQMQVQDILEQNEALKAQIQQF-HSQIAAQTSASvlAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKD 639
Cdd:COG4717 15 RDRTIEFSPGLNVIYGPNEAGKSTLLAFiRAMLLERLEKE--ADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 640 IQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQsVYVKDDKIRLLEEQLQH------EISNKMEEFKILNDQNKALKSE 713
Cdd:COG4717 93 LQEELEELEEELEELEAELEELREELEKLEKLLQ-LLPLYQELEALEAELAElperleELEERLEELRELEEELEELEAE 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 714 VQKLQTLVSEQPNkDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQ---- 789
Cdd:COG4717 172 LAELQEELEELLE-QLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKearl 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 790 --------VSFASLVEELKKVIHEKDGKIKSV--------EELLEAELLKVANKEKTVQLSITSKV--QELQNLLKGKEE 851
Cdd:COG4717 251 llliaaalLALLGLGGSLLSLILTIAGVLFLVlgllallfLLLAREKASLGKEAEELQALPALEELeeEELEELLAALGL 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 852 QMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLK------EKENELKRLEAM 925
Cdd:COG4717 331 PPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEqaeeyqELKEELEELEEQ 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 926 LKERESDLSSKTQLLQDVQDENKL--FKSQIEQLKQQnyqqassfppHEELLKVISEREKEISGLWN--ELDSLKDAVEH 1001
Cdd:COG4717 411 LEELLGELEELLEALDEEELEEELeeLEEELEELEEE----------LEELREELAELEAELEQLEEdgELAELLQELEE 480
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 118498362 1002 QRKKNNDLREKNweamEALASTEKMLQDKVNKTSKERQQQV 1042
Cdd:COG4717 481 LKAELRELAEEW----AALKLALELLEEAREEYREERLPPV 517
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
468-801 |
7.04e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 44.12 E-value: 7.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 468 KLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLhsKLTDTLVSKQQLE 547
Cdd:PLN02939 64 KLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDF--QLEDLVGMIQNAE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 548 QRLMQLmesEQKRVNKEEslqmQVQDILEQNEALKAQIQQFHSQIAAQTSASVLA--EELHKVIAEK--DKQIKQTEDSL 623
Cdd:PLN02939 142 KNILLL---NQARLQALE----DLEKILTEKEALQGKINILEMRLSETDARIKLAaqEKIHVEILEEqlEKLRNELLIRG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 624 ASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLqheISNKMEEFKIL 703
Cdd:PLN02939 215 ATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKF---IVAQEDVSKLS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 704 NDQNKALKSEVQKLQTLVSEQPNKdvVEQMEKCIQEKDEKLKTVEELLET--------------GLIQVATK--EEELNA 767
Cdd:PLN02939 292 PLQYDCWWEKVENLQDLLDRATNQ--VEKAALVLDQNQDLRDKVDKLEASlkeanvskfssykvELLQQKLKllEERLQA 369
|
330 340 350
....*....|....*....|....*....|....
gi 118498362 768 IRTENSSLTKEVQDLKAKQNDQVSfaSLVEELKK 801
Cdd:PLN02939 370 SDHEIHSYIQLYQESIKEFQDTLS--KLKEESKK 401
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
608-1260 |
7.79e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 43.86 E-value: 7.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 608 VIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNmNFLLKAEVQKlqalanEQAAAAHELEKMQQSVYVKDDKIRLLEE 687
Cdd:TIGR04523 27 IANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDK-NLNKDEEKIN------NSNNKIKILEQQIKDLNDKLKKNKDKIN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 688 QLQHEISNKMEEFKILNDQNKALKSEVQKLQTL---VSEQPNKDVVEQMEK-----CIQEKDEKLKTVEELLETGLI--- 756
Cdd:TIGR04523 100 KLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQkkeNKKNIDKFLTEIKKKekeleKLNNKYNDLKKQKEELENELNlle 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 757 -QVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQlSI 835
Cdd:TIGR04523 180 kEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLN-QL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 836 TSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDL--QEENESLKAHVQEVAQHNLKEASSASQFEELEIVLK 913
Cdd:TIGR04523 259 KDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIIS 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 914 EKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELD 993
Cdd:TIGR04523 339 QLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQ 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 994 SLKDAVEHQRKKNNDLREKNWEAMEALASTE---KMLQDKVNKTSKERQQQVEAVELEAKEVLKKLFPKVSvpsnlsyge 1070
Cdd:TIGR04523 419 QEKELLEKEIERLKETIIKNNSEIKDLTNQDsvkELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQK--------- 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1071 wlhGFEKKAKECMAGTsgsEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRsveqeenkwKVKVDESHK 1150
Cdd:TIGR04523 490 ---ELKSKEKELKKLN---EEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLED---------ELNKDDFEL 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1151 TIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEM----ERSTYVTEVRELKAQLNETLTKLRTEQNERQ 1226
Cdd:TIGR04523 555 KKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKdlikEIEEKEKKISSLEKELEKAKKENEKLSSIIK 634
|
650 660 670
....*....|....*....|....*....|....
gi 118498362 1227 KVAGDLHKAQQSLELIQSKIVKAAGDTTVIENSD 1260
Cdd:TIGR04523 635 NIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKI 668
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
377-556 |
8.77e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 8.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 377 KDRIGTLEKEHNVFQNKIHVSYQETQQMQMKFQQVREQMEA-------------------EIAHLKQEngilRDAVSNTT 437
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREAlqrlaeyswdeidvasaerEIAELEAE----LERLDASS 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 438 NQLESKQsAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYI---RKRTAEHEAA 514
Cdd:COG4913 685 DDLAALE-EQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALleeRFAAALGDAV 763
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 118498362 515 QQDLQSKFvakENEVQSLHSKLtdtlvskQQLEQRLMQLMES 556
Cdd:COG4913 764 ERELRENL---EERIDALRARL-------NRAEEELERAMRA 795
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
980-1306 |
9.06e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 9.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 980 EREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLQdkvnktskERQQQVEAVELEAKEVLKKLFpk 1059
Cdd:COG1196 222 LKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELE--------ELRLELEELELELEEAQAEEY-- 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1060 vsvpsnlsygewlhgfekkakecmagtSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLqrsvEQEEN 1139
Cdd:COG1196 292 ---------------------------ELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEEL----EEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1140 KWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLR 1219
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1220 TEQNERQKVAGDLHKAQQSLELIQSKIVKAAGDTtviensdvspETESSEKETMSVSLNQTVTQLQQLLQAVNQQLTKEK 1299
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAEL----------EEEEEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
....*..
gi 118498362 1300 EHYQVLE 1306
Cdd:COG1196 491 ARLLLLL 497
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
731-1026 |
9.66e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.38 E-value: 9.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 731 EQMEK--CIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENssLTKEVQDLKAKqndqvsfaslVEELKKvIHEKDG 808
Cdd:PRK05771 4 VRMKKvlIVTLKSYKDEVLEALHELGVVHIEDLKEELSNERLRK--LRSLLTKLSEA----------LDKLRS-YLPKLN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 809 KIKSveelleaellkvankektvqLSITSKVQELQNLLKGKEEqmntmkaVLEEKEKDLANTGKWLQDLQEENESLKAHV 888
Cdd:PRK05771 71 PLRE--------------------EKKKVSVKSLEELIKDVEE-------ELEKIEKEIKELEEEISELENEIKELEQEI 123
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 889 QEVAQ--------HNLKEASSASQFeeLEIVLKEKENELKRLEAMLKERE-SDLSSKTQLLqdVQDENKLFKSQIEQLKQ 959
Cdd:PRK05771 124 ERLEPwgnfdldlSLLLGFKYVSVF--VGTVPEDKLEELKLESDVENVEYiSTDKGYVYVV--VVVLKELSDEVEEELKK 199
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 118498362 960 QNYQQASsFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNDL-----------REKNwEAMEALASTEKM 1026
Cdd:PRK05771 200 LGFERLE-LEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEEllalyeyleieLERA-EALSKFLKTDKT 275
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
332-1108 |
1.02e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.67 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 332 HQLQEKDKLLAAVKEDAAATKDrCKQLTQEMMTEKERSNVVITRMKDRIGTLEKEHNVFQnKIHVSYQETQQMQMKFQQv 411
Cdd:pfam12128 176 SPLRHIDKIAKAMHSKEGKFRD-VKSMIVAILEDDGVVPPKSRLNRQQVEHWIRDIQAIA-GIMKIRPEFTKLQQEFNT- 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 412 REQMEAEIAHLKQEngiLRDAVSNTTNQLESKQSAeLNKLRQDYARLVNELTEKTGKLQQEevqKKNAEQAATQLKVQLQ 491
Cdd:pfam12128 253 LESAELRLSHLHFG---YKSDETLIASRQEERQET-SAELNQLLRTLDDQWKEKRDELNGE---LSAADAAVAKDRSELE 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 492 EAERRWEEVQsyirKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRV--NKEESLQM 569
Cdd:pfam12128 326 ALEDQHGAFL----DADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDiaGIKDKLAK 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 570 QVQDILEQNEALKAQIQQFHSQIAAQTSASVLAeelhkvIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKA 649
Cdd:pfam12128 402 IREARDRQLAVAEDDLQALESELREQLEAGKLE------FNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDERIER 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 650 EVQKLQALANEQAAAAHELEKM-----QQSVYVKDDKIRLLE-----EQLQHEISNK---MEEFkiLNDQNKALKSEVQK 716
Cdd:pfam12128 476 AREEQEAANAEVERLQSELRQArkrrdQASEALRQASRRLEErqsalDELELQLFPQagtLLHF--LRKEAPDWEQSIGK 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 717 LqtLVSEQPNK-DVVEQMEKCIQEKDEKLKTVEELLETglIQV---ATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSF 792
Cdd:pfam12128 554 V--ISPELLHRtDLDPEVWDGSVGGELNLYGVKLDLKR--IDVpewAASEEELRERLDKAEEALQSAREKQAAAEEQLVQ 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 793 ASL-VEELKKviheKDGKIKSVEELLEAELLKVANKEKTVQLSITSKVQELQnllKGKEEQMNTMKAVLEEKEKDLAntg 871
Cdd:pfam12128 630 ANGeLEKASR----EETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERK---DSANERLNSLEAQLKQLDKKHQ--- 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 872 KWLQDLQEENESLKAHVQEVAQhNLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSK---TQLLQDVQDENK 948
Cdd:pfam12128 700 AWLEEQKEQKREARTEKQAYWQ-VVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLgvdPDVIAKLKREIR 778
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 949 LFKSQIEQLKQQNYQ-------QASSFPPHEELLKV-ISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEAL 1020
Cdd:pfam12128 779 TLERKIERIAVRRQEvlryfdwYQETWLQRRPRLATqLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRL 858
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1021 ASTEKMLQDKVNKTSKERQQQ-VEAVELEAKEVLKKLFPKVSVPSNLSygEWLHGFEKKAKECMAGTSGSEEVkvlEHKL 1099
Cdd:pfam12128 859 SENLRGLRCEMSKLATLKEDAnSEQAQGSIGERLAQLEDLKLKRDYLS--ESVKKYVEHFKNVIADHSGSGLA---ETWE 933
|
....*....
gi 118498362 1100 KEADEMHTL 1108
Cdd:pfam12128 934 SLREEDHYQ 942
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
831-947 |
1.17e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 43.15 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 831 VQLSITSKVQELQNLLKgKEEQMNTMKAVLEeKEKDLANTGKwLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEI 910
Cdd:COG0542 402 VRMEIDSKPEELDELER-RLEQLEIEKEALK-KEQDEASFER-LAELRDELAELEEELEALKARWEAEKELIEEIQELKE 478
|
90 100 110
....*....|....*....|....*....|....*..
gi 118498362 911 VLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDEN 947
Cdd:COG0542 479 ELEQRYGKIPELEKELAELEEELAELAPLLREEVTEE 515
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
601-1186 |
1.18e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.35 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 601 LAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEE---ELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQ---QS 674
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERlsiEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAEsdlSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 675 VYVKDDKIRLLEEQLQheisnkmeefKILNDQNKALKSEVQKLQTLVSEQPN-KDVVEQMEKCIQEKDEKLKTVEELlet 753
Cdd:PRK01156 268 ELEKNNYYKELEERHM----------KIINDPVYKNRNYINDYFKYKNDIENkKQILSNIDAEINKYHAIIKKLSVL--- 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 754 gliqvATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEElleaellkvankektvql 833
Cdd:PRK01156 335 -----QKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSA------------------ 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 834 sitskvqELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQH-NLKEASSASQF------- 905
Cdd:PRK01156 392 -------FISEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNmEMLNGQSVCPVcgttlge 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 906 EELEIVLKEKENELKRLEAMLKERESDLSS-KTQLLQDVQDENKLFKSQIEQLKQQnYQQASSFPPHEELLKVISEREKE 984
Cdd:PRK01156 465 EKSNHIINHYNEKKSRLEEKIREIEIEVKDiDEKIVDLKKRKEYLESEEINKSINE-YNKIESARADLEDIKIKINELKD 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 985 ISGLWNELDSlkdavEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTSKERQQQVEAVELEAKEVlkklfpKVSVPS 1064
Cdd:PRK01156 544 KHDKYEEIKN-----RYKSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEI------EIGFPD 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1065 NLSYgewlhgFEKKAKECmagtsgSEEVKVLEHKLKEADEMHTL---LQLECEKYKSVLAETEGILQKLQ----RSVEQE 1137
Cdd:PRK01156 613 DKSY------IDKSIREI------ENEANNLNNKYNEIQENKILiekLRGKIDNYKKQIAEIDSIIPDLKeitsRINDIE 680
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 118498362 1138 EN----------------KWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHL 1186
Cdd:PRK01156 681 DNlkksrkalddakanraRLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLREAF 745
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
728-960 |
1.39e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 728 DVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNdqvsfaslveELKKVIHEKD 807
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELA----------ALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 808 GKIKSVEELLEAELLKVAnkEKTVQLSITSKVQELQNLLKGKEeqmntmkavLEEKEKDLANTGKWLQDLQEENESLKAH 887
Cdd:COG4942 90 KEIAELRAELEAQKEELA--ELLRALYRLGRQPPLALLLSPED---------FLDAVRRLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 118498362 888 VQEVAQhnlKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQ 960
Cdd:COG4942 159 LAELAA---LRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
409-790 |
1.63e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 409 QQVREQMEAEIAHLKQENGILRDAVSNTTNQLEskqsaeLNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKV 488
Cdd:COG4717 94 QEELEELEEELEELEAELEELREELEKLEKLLQ------LLPLYQELEALEAELAELPERLEELEERLEELRELEEELEE 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 489 QLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLmESEQKRVNKEESLQ 568
Cdd:COG4717 168 LEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQL-ENELEAAALEERLK 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 569 MQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLAS-ERDRLTSKEEELKDIQNMNFLL 647
Cdd:COG4717 247 EARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEaEELQALPALEELEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 648 KAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISN------------------KMEEFKILNDQNKA 709
Cdd:COG4717 327 ALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAllaeagvedeeelraaleQAEEYQELKEELEE 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 710 LKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTEN--SSLTKEVQDLKAKQN 787
Cdd:COG4717 407 LEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGelAELLQELEELKAELR 486
|
...
gi 118498362 788 DQV 790
Cdd:COG4717 487 ELA 489
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
978-1232 |
2.06e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.31 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 978 ISEREKEISGLWNELDSLKDAVEHQRKKNNDLREKNWEAMEALAS--TEKMLQDKVNKTSKER-QQQVEAVELEAKEV-- 1052
Cdd:PHA02562 176 IRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNkyDELVEEAKTIKAEIEElTDELLNLVMDIEDPsa 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1053 -LKKLFPK-VSVPSNLSYGEWLHGFEKKAKECMAGTSGseevkvlehkLKEADEMhtllqleCEKYKSVLAETEGILQKL 1130
Cdd:PHA02562 256 aLNKLNTAaAKIKSKIEQFQKVIKMYEKGGVCPTCTQQ----------ISEGPDR-------ITKIKDKLKELQHSLEKL 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1131 QRSVEQEENKwKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENlrrerehlemELEKAEMERSTYVTEVRELKAQ 1210
Cdd:PHA02562 319 DTAIDELEEI-MDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKA----------AIEELQAEFVDNAEELAKLQDE 387
|
250 260
....*....|....*....|....*
gi 118498362 1211 LNE---TLTKLRTEQNERQKVAGDL 1232
Cdd:PHA02562 388 LDKivkTKSELVKEKYHRGIVTDLL 412
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
431-641 |
2.21e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 431 DAVSNTTNQLESKQsAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRtae 510
Cdd:COG3883 16 PQIQAKQKELSELQ-AELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGER--- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 511 heAAQQDLQSKFVAKENEVqsLHSKLTDTLVSKQQLeqrLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQfhs 590
Cdd:COG3883 92 --ARALYRSGGSVSYLDVL--LGSESFSDFLDRLSA---LSKIADADADLLEELKADKAELEAKKAELEAKLAELEA--- 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 118498362 591 qiaAQTSASVLAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQ 641
Cdd:COG3883 162 ---LKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
412-532 |
2.52e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 2.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 412 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAA-------T 484
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLpasaeefA 383
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 118498362 485 QLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
837-930 |
2.54e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.07 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 837 SKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQE-VAQHN--LKEASSASQFEELEIVLK 913
Cdd:PRK12704 82 NELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEElIEEQLqeLERISGLTAEEAKEILLE 161
|
90
....*....|....*...
gi 118498362 914 EKENELKR-LEAMLKERE 930
Cdd:PRK12704 162 KVEEEARHeAAVLIKEIE 179
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
877-1205 |
2.67e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.03 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 877 LQEENESLKAHVQEvaQHNLKEASSASQFE---------ELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDEN 947
Cdd:pfam17380 301 LRQEKEEKAREVER--RRKLEEAEKARQAEmdrqaaiyaEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMR 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 948 KLFKSQIE-QLKQQNYQQASSFPPHEELLKviSEREKEISGLWNELDSLKDAVEHQRKknndlreknwEAMEALASTEKM 1026
Cdd:pfam17380 379 ELERLQMErQQKNERVRQELEAARKVKILE--EERQRKIQQQKVEMEQIRAEQEEARQ----------REVRRLEEERAR 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1027 LQDKVNKTSKERQQQVEAVELEAKEVLKKLFPKVSVPSnlsygewlhgfEKKAKECMAGTSGSEEVKVLEHKLKEADEMH 1106
Cdd:pfam17380 447 EMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKR-----------DRKRAEEQRRKILEKELEERKQAMIEEERKR 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1107 TLLQLECEKYKSVLAETEgilqklQRSVEQEENKWKVKVDEShktiKQMQSSFTSSEQELERLRSENKDIENLrreREHL 1186
Cdd:pfam17380 516 KLLEKEMEERQKAIYEEE------RRREAEEERRKQQEMEER----RRIQEQMRKATEERSRLEAMEREREMM---RQIV 582
|
330
....*....|....*....
gi 118498362 1187 EMELEKAEMERSTYVTEVR 1205
Cdd:pfam17380 583 ESEKARAEYEATTPITTIK 601
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
911-1227 |
2.91e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.95 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 911 VLKEKENELKRLEAMLKERESD-----LSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEI 985
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKdlherLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEI 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 986 SGL-------WNELDSLKDAVEHQRKKNNDLREknwEAMEALASTEkmLQDKVNKTSKERQQQVEAVELEAKEVLKKLFP 1058
Cdd:PRK02224 261 EDLretiaetEREREELAEEVRDLRERLEELEE---ERDDLLAEAG--LDDADAEAVEARREELEDRDEELRDRLEECRV 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1059 KVSVpsnlsygewlhgFEKKAKecmagtSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQ---RSVE 1135
Cdd:PRK02224 336 AAQA------------HNEEAE------SLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEeeiEELR 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1136 QEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSENKDIENLRREREHL-------EMELEKAEMERSTYVTEVRELK 1208
Cdd:PRK02224 398 ERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALleagkcpECGQPVEGSPHVETIEEDRERV 477
|
330
....*....|....*....
gi 118498362 1209 AQLNETLTKLRTEQNERQK 1227
Cdd:PRK02224 478 EELEAELEDLEEEVEEVEE 496
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
437-781 |
3.03e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 437 TNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQ 516
Cdd:COG4372 22 TGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQE 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 517 DLQSkfvaKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQT 596
Cdd:COG4372 102 ELES----LQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 597 SA---SVLAEELHKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQ 673
Cdd:COG4372 178 EAeaeQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVIL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 674 SVYVKDDKIRLLEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLET 753
Cdd:COG4372 258 KEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLA 337
|
330 340
....*....|....*....|....*...
gi 118498362 754 GLIQVATKEEELNAIRTENSSLTKEVQD 781
Cdd:COG4372 338 ELADLLQLLLVGLLDNDVLELLSKGAEA 365
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
320-509 |
3.55e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 320 KKSSKGELTTLIHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMTEKERSNVVITRMKDRIGTLEKEHNVFQNKIHVSYQ 399
Cdd:COG4942 50 EKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPE 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 400 ETQQ---MQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQS--AELNKLRQDYARLVNELTEKTGKLQQEEV 474
Cdd:COG4942 130 DFLDavrRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAllAELEEERAALEALKAERQKLLARLEKELA 209
|
170 180 190
....*....|....*....|....*....|....*
gi 118498362 475 QKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTA 509
Cdd:COG4942 210 ELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
478-701 |
3.82e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 478 NAEQAATqLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQ-----SKFVAKENEVQSLHSKLtdtlvskQQLEQRLMQ 552
Cdd:COG4913 608 NRAKLAA-LEAELAELEEELAEAEERLEALEAELDALQERREalqrlAEYSWDEIDVASAEREI-------AELEAELER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 553 LMESeqkrvnkeeslQMQVQDILEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQIKQTEDSLASERDRLTS 632
Cdd:COG4913 680 LDAS-----------SDDLAALEEQLEELEAELEELEEEL----------DELKGEIGRLEKELEQAEEELDELQDRLEA 738
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 118498362 633 KEEELKDIQnmNFLLKAEVQKLQALANEQAAAahelEKMQQSVYVKDDKIRLLEEQLQheisNKMEEFK 701
Cdd:COG4913 739 AEDLARLEL--RALLEERFAAALGDAVERELR----ENLEERIDALRARLNRAEEELE----RAMRAFN 797
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
730-1056 |
4.08e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.59 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 730 VEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKeVQDLKAKQND--QVSFASLVEELKKVIHEKD 807
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAER-YQALLKEKREyeGYELLKEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 808 GKIKSVEELLEAELLKVANKEKTVQlSITSKVQELQNLLKGK-EEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKA 886
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLE-EIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 887 HVQE-VAQHNLKEASSASQFEELEIVLKEKE---NELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNY 962
Cdd:TIGR02169 323 RLAKlEAEIDKLLAEIEELEREIEEERKRRDkltEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREIN 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 963 QQASSFPPHEELLKVISEREKEISglwNELDSLKDAVEHQRKKNNDLREKNWEAMEALASTEKMLqDKVNKTSKERQQQV 1042
Cdd:TIGR02169 403 ELKRELDRLQEELQRLSEELADLN---AAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADL-SKYEQELYDLKEEY 478
|
330
....*....|....
gi 118498362 1043 EAVELEAKEVLKKL 1056
Cdd:TIGR02169 479 DRVEKELSKLQREL 492
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1160-1246 |
5.58e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 5.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1160 TSSEQELERLRSEnkdIENLRREREHLEMELEKAEMERstyVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSL 1239
Cdd:COG0542 407 DSKPEELDELERR---LEQLEIEKEALKKEQDEASFER---LAELRDELAELEEELEALKARWEAEKELIEEIQELKEEL 480
|
....*..
gi 118498362 1240 ELIQSKI 1246
Cdd:COG0542 481 EQRYGKI 487
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
446-735 |
7.10e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.77 E-value: 7.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 446 AELNKLRQDYARLVNEltektgKLQQEEVQKKNAEQaatQLKVQlqeaerrweevQSYIRKRTAEHEAAQQDLQSKFVAK 525
Cdd:PHA02562 166 SEMDKLNKDKIRELNQ------QIQTLDMKIDHIQQ---QIKTY-----------NKNIEEQRKKNGENIARKQNKYDEL 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 526 ENEVQSLhskltdtlvsKQQLEQRLMQLMESEQKRVNKEESLQmqvqDILEQNEALKAQIQQFHSQIAAQTSasvlaeel 605
Cdd:PHA02562 226 VEEAKTI----------KAEIEELTDELLNLVMDIEDPSAALN----KLNTAAAKIKSKIEQFQKVIKMYEK-------- 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 606 HKVIAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLL 685
Cdd:PHA02562 284 GGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKV 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 118498362 686 E---EQLQHEISNKMEEFKILNDQNKALKSevqKLQTLVSEQPNKDVVEQMEK 735
Cdd:PHA02562 364 KaaiEELQAEFVDNAEELAKLQDELDKIVK---TKSELVKEKYHRGIVTDLLK 413
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
677-1246 |
7.46e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.79 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 677 VKDDKIRLLEeQLQHEISNKmeEFKILNDQNKALKSEVQKLQTLVSE--------QPNKDVVEQMEKCIQEKDEKLKTVE 748
Cdd:PRK02224 181 VLSDQRGSLD-QLKAQIEEK--EEKDLHERLNGLESELAELDEEIERyeeqreqaRETRDEADEVLEEHEERREELETLE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 749 ELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASL----VEELKKVIHEKDGKIKSVEELLEAELLKV 824
Cdd:PRK02224 258 AEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLddadAEAVEARREELEDRDEELRDRLEECRVAA 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 825 ANKEKTVQlSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVqevaqhnlkeASSASQ 904
Cdd:PRK02224 338 QAHNEEAE-SLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERF----------GDAPVD 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 905 FEELEIVLKEKENELKRLEAMLKERESDLSSktqlLQDVQDENKLFksqIEQLKQQNYQQASSFPPHEEllkVISEREKE 984
Cdd:PRK02224 407 LGNAEDFLEELREERDELREREAELEATLRT----ARERVEEAEAL---LEAGKCPECGQPVEGSPHVE---TIEEDRER 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 985 ISGLWNELDSLKDAVEHqrkknndlREKNWEAMEALASTEKMLQdkvnkTSKERQQQVEAVELEAKEvlkklfpkvsvps 1064
Cdd:PRK02224 477 VEELEAELEDLEEEVEE--------VEERLERAEDLVEAEDRIE-----RLEERREDLEELIAERRE------------- 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1065 nlsygewlhGFEKKAKECmagTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQeenkwkvk 1144
Cdd:PRK02224 531 ---------TIEEKRERA---EELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIES-------- 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1145 vdeshktikqmqssftsseqeLERLRSENKDIENLRREREHLEMELE-KAEM--ERSTYVTEVRELKAQLNETLTKLRTE 1221
Cdd:PRK02224 591 ---------------------LERIRTLLAAIADAEDEIERLREKREaLAELndERRERLAEKRERKRELEAEFDEARIE 649
|
570 580
....*....|....*....|....*
gi 118498362 1222 QNERQKvagdlHKAQQSLELIQSKI 1246
Cdd:PRK02224 650 EAREDK-----ERAEEYLEQVEEKL 669
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1095-1248 |
7.51e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.52 E-value: 7.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 1095 LEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRsvEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRSEnk 1174
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARLEAAKTELEDLEK--EIKRLELEIEEVEARIKKYEEQLGNVRNNKEYEALQKE-- 97
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 118498362 1175 dIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVK 1248
Cdd:COG1579 98 -IESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAA 170
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
506-727 |
7.68e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 7.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 506 KRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQI 585
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 586 QQFHSQIAAQTSASVLAEELHKV--------IAEKDKQIKQTEDSLASERDRLTSKEEELKDIQNMNFLLKAEVQKLQAL 657
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLalllspedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 658 ANEQAAAAHELEKMQQSVyvkddkiRLLEEQLQHEISNKMEEFKILNDQNKALKSEVQKLQTLVSEQPNK 727
Cdd:COG4942 180 LAELEEERAALEALKAER-------QKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
706-936 |
9.21e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 9.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 706 QNKALKSEVQKLQTLVSEQpnkdvvEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAK 785
Cdd:COG4942 18 QADAAAEAEAELEQLQQEI------AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118498362 786 QND-QVSFASLVEELKKVI--HEKDGKIKSVEELLEAELLKVANKEKTVQLSITSKVQELQNLLKGKEEQMNTMKAVLEE 862
Cdd:COG4942 92 IAElRAELEAQKEELAELLraLYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 118498362 863 KEKDLANTGKWLQDLQEENESLKA-HVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEAMLKERESDLSSK 936
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAeRQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| |
