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Conserved domains on  [gi|146229333|ref|NP_001078892|]
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allergin-1 isoform Allergin-1L precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ig_C17orf99 super family cl39263
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 48-109 9.62e-04

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


The actual alignment was detected with superfamily member pfam17736:

Pssm-ID: 465476  Cd Length: 95  Bit Score: 37.86  E-value: 9.62e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 146229333   48 KGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQD--GKGEPAIFNLSITE--AHESGPYKCKAQVTS 109
Cdd:pfam17736  15 SGRRVLISCHASQGSPPITYSLVGSDGIVVAKKipLHGEPANFSLNITLksSPDLLTYQCQAANTS 80
Ig_C17orf99 super family cl39263
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 141-216 1.92e-03

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


The actual alignment was detected with superfamily member pfam17736:

Pssm-ID: 465476  Cd Length: 95  Bit Score: 37.09  E-value: 1.92e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 146229333  141 RHITLHCLSVNGSLPINYTFFENH-VAISPAISKyDREPAEFNL--TKKNPGEEEEYRCEAKNRLPNYAtYSHPVTMPS 216
Cdd:pfam17736  17 RRVLISCHASQGSPPITYSLVGSDgIVVAKKIPL-HGEPANFSLniTLKSSPDLLTYQCQAANTSGTQV-SSLRLQPPW 93
 
Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 48-109 9.62e-04

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 37.86  E-value: 9.62e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 146229333   48 KGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQD--GKGEPAIFNLSITE--AHESGPYKCKAQVTS 109
Cdd:pfam17736  15 SGRRVLISCHASQGSPPITYSLVGSDGIVVAKKipLHGEPANFSLNITLksSPDLLTYQCQAANTS 80
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 141-216 1.92e-03

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 37.09  E-value: 1.92e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 146229333  141 RHITLHCLSVNGSLPINYTFFENH-VAISPAISKyDREPAEFNL--TKKNPGEEEEYRCEAKNRLPNYAtYSHPVTMPS 216
Cdd:pfam17736  17 RRVLISCHASQGSPPITYSLVGSDgIVVAKKIPL-HGEPANFSLniTLKSSPDLLTYQCQAANTSGTQV-SSLRLQPPW 93
 
Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 48-109 9.62e-04

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 37.86  E-value: 9.62e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 146229333   48 KGQNVSMFCSHKNKSLQITYSLFRRKTHLGTQD--GKGEPAIFNLSITE--AHESGPYKCKAQVTS 109
Cdd:pfam17736  15 SGRRVLISCHASQGSPPITYSLVGSDGIVVAKKipLHGEPANFSLNITLksSPDLLTYQCQAANTS 80
Ig_2 pfam13895
Immunoglobulin domain; This domain contains immunoglobulin-like domains.
 37-121 1.04e-03

Immunoglobulin domain; This domain contains immunoglobulin-like domains.


Pssm-ID: 464026 [Multi-domain]  Cd Length: 79  Bit Score: 37.37  E-value: 1.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146229333   37 PCLDSKTKVVMKGQNVSMFCSHKNKSLqITYSLFRRKTHLGTQdgkgePAIFNLSITEAHeSGPYKCKAQVTSCSKYSRD 116
Cdd:pfam13895   2 PVLTPSPTVVTEGEPVTLTCSAPGNPP-PSYTWYKDGSAISSS-----PNFFTLSVSAED-SGTYTCVARNGRGGKVSNP 74


                  ....*
gi 146229333  117 FSFTI 121
Cdd:pfam13895  75 VELTV 79
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 141-216 1.92e-03

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 37.09  E-value: 1.92e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 146229333  141 RHITLHCLSVNGSLPINYTFFENH-VAISPAISKyDREPAEFNL--TKKNPGEEEEYRCEAKNRLPNYAtYSHPVTMPS 216
Cdd:pfam17736  17 RRVLISCHASQGSPPITYSLVGSDgIVVAKKIPL-HGEPANFSLniTLKSSPDLLTYQCQAANTSGTQV-SSLRLQPPW 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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