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Conserved domains on  [gi|164518932|ref|NP_001101091|]
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GDP-fucose protein O-fucosyltransferase 2 precursor [Rattus norvegicus]

Protein Classification

GDP-fucose protein O-fucosyltransferase 2( domain architecture ID 10181941)

GDP-fucose protein O-fucosyltransferase 2 (POFUT2) catalyzes the reaction that attaches fucose through an O-glycosidic linkage to a conserved serine or threonine residue in the consensus sequence C1-X-X-S/T-C2 of thrombospondin type I repeats (TSRs) where C1 and C2 are the first and second cysteines of the repeat, respectively

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
O-FucT-2 cd11298
GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 ...
45-414 0e+00

GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 repeats (TSRs), and appears conserved in bilateria. The O-fucosylation of TSRs appears to play a role in regulating secretion of metalloproteases of the ADAMTS superfamily. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


:

Pssm-ID: 211384  Cd Length: 374  Bit Score: 660.50  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  45 YLLYDVNPPEGFNLRRDVYIRVASLLKTLLK---TEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIE 121
Cdd:cd11298    1 YLLYDVNPGEGFNLRRDVYIRVANLVKSLNKrgkEQDWVLVLPPWGRLYHWKSRDIKQSRLPWSLFFDLESLNRYIPVIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 122 YEQFIAESGGPFIDQVYVLQGYAEGWKEGTWEEKVDERPCIDPLLYSQDKHEYFRGWFWGYEETRGLNVSCLSVQGSASV 201
Cdd:cd11298   81 YEEFLKETGPVSIDILYYLQHYAEGWEKGKWEDKLEERSCIIEPVYSKDCDGKYRGWFWGYCEVTARKFSCLSFQGSASY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 202 IAPVLLKNTSARSVMLDRAENLLHDHYGGREYWDTRRSMVFAKHLRAVGDEFRSQHLNSTDAADKMVLEEdWTRMKVKLG 281
Cdd:cd11298  161 LAPSLLENKFLRSIMIDRAEVLLHDHYGILDYWNARRSMRFAKHLRDIANEFRKEYLNSTDESDKTVRPE-WWRMKKKKG 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 282 SALGGPYLGVHLRRKDFIWGHREDVPSLEGAVKKIRSLMKTHQLDKVFVATDAIRKEQEELRKLL--PEMVRFEPTWEEL 359
Cdd:cd11298  240 SALGGPYLAVHLRRGDFVYGRKKDVPSLKGAAKQILNLMKKLKLKKVFIATDAKKEELEELKKLLkkLKVVRYEPTLEEL 319
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 164518932 360 ELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGD 414
Cdd:cd11298  320 EKLKDGGVAIIDQWICAHARYFIGTKESTFSFRIQEEREILGFPPDTTFNRLCGD 374
 
Name Accession Description Interval E-value
O-FucT-2 cd11298
GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 ...
45-414 0e+00

GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 repeats (TSRs), and appears conserved in bilateria. The O-fucosylation of TSRs appears to play a role in regulating secretion of metalloproteases of the ADAMTS superfamily. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211384  Cd Length: 374  Bit Score: 660.50  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  45 YLLYDVNPPEGFNLRRDVYIRVASLLKTLLK---TEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIE 121
Cdd:cd11298    1 YLLYDVNPGEGFNLRRDVYIRVANLVKSLNKrgkEQDWVLVLPPWGRLYHWKSRDIKQSRLPWSLFFDLESLNRYIPVIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 122 YEQFIAESGGPFIDQVYVLQGYAEGWKEGTWEEKVDERPCIDPLLYSQDKHEYFRGWFWGYEETRGLNVSCLSVQGSASV 201
Cdd:cd11298   81 YEEFLKETGPVSIDILYYLQHYAEGWEKGKWEDKLEERSCIIEPVYSKDCDGKYRGWFWGYCEVTARKFSCLSFQGSASY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 202 IAPVLLKNTSARSVMLDRAENLLHDHYGGREYWDTRRSMVFAKHLRAVGDEFRSQHLNSTDAADKMVLEEdWTRMKVKLG 281
Cdd:cd11298  161 LAPSLLENKFLRSIMIDRAEVLLHDHYGILDYWNARRSMRFAKHLRDIANEFRKEYLNSTDESDKTVRPE-WWRMKKKKG 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 282 SALGGPYLGVHLRRKDFIWGHREDVPSLEGAVKKIRSLMKTHQLDKVFVATDAIRKEQEELRKLL--PEMVRFEPTWEEL 359
Cdd:cd11298  240 SALGGPYLAVHLRRGDFVYGRKKDVPSLKGAAKQILNLMKKLKLKKVFIATDAKKEELEELKKLLkkLKVVRYEPTLEEL 319
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 164518932 360 ELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGD 414
Cdd:cd11298  320 EKLKDGGVAIIDQWICAHARYFIGTKESTFSFRIQEEREILGFPPDTTFNRLCGD 374
O-FucT pfam10250
GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing ...
45-400 9.55e-49

GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteriztic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese.


Pssm-ID: 463023 [Multi-domain]  Cd Length: 247  Bit Score: 166.32  E-value: 9.55e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932   45 YLLYDvnPPEG-FNLRRDVYIRVASLLKTLLKTeewvLVLPPWGRLYHWQSPDIhqVRIPWSEFFDLPslnknipvieye 123
Cdd:pfam10250   1 YLLYC--PCNGgFNQQRDHICDAVAFARLLNAT----LVLPPWDQLYHWRDPST--DQIPFSDIFDEF------------ 60
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  124 qfiaesggpfidqvyvlqgyaegwkegtweekvderpcIDPLlysqdkheyfrgwfwgyeetrglnvsCLSVQGSASVIa 203
Cdd:pfam10250  61 --------------------------------------IESL--------------------------CRSKQGNFGPF- 75
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  204 pvllkntsarsvmldraenllhdhyggreyWDTRRSMVFAKHLRAVGDEFRSQHLNstdaadkmvleedwtrmkvklgsa 283
Cdd:pfam10250  76 ------------------------------WVNFHALRFSPEIEELGDKLVDRLLK------------------------ 101
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  284 lgGPYLGVHLRR-KDFI--WGH--------------------------REDVPSLEGAVKKIRSLMKTHQldKVFVATDA 334
Cdd:pfam10250 102 --GPYLALHLRReKDMLaaSGCaegggdeeaeedpeerrrnglcpltpEECLPSLVGILLQALGFVKKLT--RIYVATDE 177
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  335 IRKEQE--ELRKLLPEMVRFE--PTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREIL 400
Cdd:pfam10250 178 IYGGEElaPLKSMFPNLVTKEslASVEELEPFKDGSSAALDYIICLHSDVFIGTCVSNFSAFVKGERRYL 247
 
Name Accession Description Interval E-value
O-FucT-2 cd11298
GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 ...
45-414 0e+00

GDP-fucose protein O-fucosyltransferase 2; O-FucT-2 adds O-fucose to thrombospondin type 1 repeats (TSRs), and appears conserved in bilateria. The O-fucosylation of TSRs appears to play a role in regulating secretion of metalloproteases of the ADAMTS superfamily. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211384  Cd Length: 374  Bit Score: 660.50  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  45 YLLYDVNPPEGFNLRRDVYIRVASLLKTLLK---TEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIE 121
Cdd:cd11298    1 YLLYDVNPGEGFNLRRDVYIRVANLVKSLNKrgkEQDWVLVLPPWGRLYHWKSRDIKQSRLPWSLFFDLESLNRYIPVIE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 122 YEQFIAESGGPFIDQVYVLQGYAEGWKEGTWEEKVDERPCIDPLLYSQDKHEYFRGWFWGYEETRGLNVSCLSVQGSASV 201
Cdd:cd11298   81 YEEFLKETGPVSIDILYYLQHYAEGWEKGKWEDKLEERSCIIEPVYSKDCDGKYRGWFWGYCEVTARKFSCLSFQGSASY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 202 IAPVLLKNTSARSVMLDRAENLLHDHYGGREYWDTRRSMVFAKHLRAVGDEFRSQHLNSTDAADKMVLEEdWTRMKVKLG 281
Cdd:cd11298  161 LAPSLLENKFLRSIMIDRAEVLLHDHYGILDYWNARRSMRFAKHLRDIANEFRKEYLNSTDESDKTVRPE-WWRMKKKKG 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 282 SALGGPYLGVHLRRKDFIWGHREDVPSLEGAVKKIRSLMKTHQLDKVFVATDAIRKEQEELRKLL--PEMVRFEPTWEEL 359
Cdd:cd11298  240 SALGGPYLAVHLRRGDFVYGRKKDVPSLKGAAKQILNLMKKLKLKKVFIATDAKKEELEELKKLLkkLKVVRYEPTLEEL 319
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 164518932 360 ELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGD 414
Cdd:cd11298  320 EKLKDGGVAIIDQWICAHARYFIGTKESTFSFRIQEEREILGFPPDTTFNRLCGD 374
O-FucT pfam10250
GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing ...
45-400 9.55e-49

GDP-fucose protein O-fucosyltransferase; This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteriztic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese.


Pssm-ID: 463023 [Multi-domain]  Cd Length: 247  Bit Score: 166.32  E-value: 9.55e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932   45 YLLYDvnPPEG-FNLRRDVYIRVASLLKTLLKTeewvLVLPPWGRLYHWQSPDIhqVRIPWSEFFDLPslnknipvieye 123
Cdd:pfam10250   1 YLLYC--PCNGgFNQQRDHICDAVAFARLLNAT----LVLPPWDQLYHWRDPST--DQIPFSDIFDEF------------ 60
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  124 qfiaesggpfidqvyvlqgyaegwkegtweekvderpcIDPLlysqdkheyfrgwfwgyeetrglnvsCLSVQGSASVIa 203
Cdd:pfam10250  61 --------------------------------------IESL--------------------------CRSKQGNFGPF- 75
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  204 pvllkntsarsvmldraenllhdhyggreyWDTRRSMVFAKHLRAVGDEFRSQHLNstdaadkmvleedwtrmkvklgsa 283
Cdd:pfam10250  76 ------------------------------WVNFHALRFSPEIEELGDKLVDRLLK------------------------ 101
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  284 lgGPYLGVHLRR-KDFI--WGH--------------------------REDVPSLEGAVKKIRSLMKTHQldKVFVATDA 334
Cdd:pfam10250 102 --GPYLALHLRReKDMLaaSGCaegggdeeaeedpeerrrnglcpltpEECLPSLVGILLQALGFVKKLT--RIYVATDE 177
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  335 IRKEQE--ELRKLLPEMVRFE--PTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREIL 400
Cdd:pfam10250 178 IYGGEElaPLKSMFPNLVTKEslASVEELEPFKDGSSAALDYIICLHSDVFIGTCVSNFSAFVKGERRYL 247
O-FucT_like cd11296
GDP-fucose protein O-fucosyltransferase and related proteins; O-fucosyltransferase-like ...
233-402 1.03e-27

GDP-fucose protein O-fucosyltransferase and related proteins; O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211383  Cd Length: 206  Bit Score: 109.04  E-value: 1.03e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 233 YWDTRRSMVFAKHLRAVGDEFRSqhlnstdaadkmvleedwtrmkvKLGSALGGPYLGVHLRRKDFIWGHR--------- 303
Cdd:cd11296   42 IRLVGKHLRFSPEIRKLADRFVR-----------------------KLLGLPGGPYLAVHLRRGDFEVECChlakwmgey 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 304 --EDVPSLEGAVKKIRSLMKTHQLDKVFVATDAIRKE--QEELRKLLPEMVRFEPTWEELELYKD-----GGVAIIDQWI 374
Cdd:cd11296   99 leECLLSAEEIAEKIKELMAERKLKVVYVATDEADREelREELRKAGIRVVTKDDLLEDAELLELekldnYLLSLVDQEI 178
                        170       180
                 ....*....|....*....|....*...
gi 164518932 375 CAHARFFIGTSVSTFSFRIHEEREILGL 402
Cdd:cd11296  179 CSRADVFIGTGFSTFSSNVALLRRWRGK 206
NodZ_like cd11548
Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ; Bradyrhizobium NodZ is an alpha 1, ...
285-390 1.58e-06

Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ; Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes.


Pssm-ID: 211389 [Multi-domain]  Cd Length: 287  Bit Score: 49.29  E-value: 1.58e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 285 GGPYLGVHLRRKDfiwGHREDVPSLEGAVKKIRSLMKTHQLDK---VFVATDAiRKEQEELRKLLPEMV----RFEPTWE 357
Cdd:cd11548  164 GRPTIGVHIRTTD---HKDSLFIKLSPLHRVVDALRKKVALHKdatIFLATDS-AEVKDELKRLFPDVVvtpkEFPPHGE 239
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 164518932 358 ELEL-YKDGGV-AIIDQWICAHARFFIGTSVSTFS 390
Cdd:cd11548  240 RSASdGLEGAEdALIDMYLLARCDHLIGSRFSTFS 274
O-FucT-1 cd11302
GDP-fucose protein O-fucosyltransferase 1; The protein O-fucosyltransferase 1 (Ofut1 or ...
80-402 3.15e-06

GDP-fucose protein O-fucosyltransferase 1; The protein O-fucosyltransferase 1 (Ofut1 or O-FucT-1) adds O-fucose to EGF (epidermal growth factor-like) repeats. The O-fucsosylation of the Notch receptor signaling protein is dependent on this enzyme, which requires GDP-fucose as a substrate. O-fucose residues added to the target of O-FucT-1 may be further elongated by other glycosyltransferases. On top of O-fucosylation, O-FucT-1 may have other functions such as the regulation of the Notch receptor exit from the ER. Six highly conserved cysteines are present in O-FucT-1, which is a soluble ER protein, as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteristic of several glycosyltransferase families. The membrane-bound pre-protein is released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese. O-FucT-1 is similar to family 1 glycosyltransferases (GT1).


Pssm-ID: 211388  Cd Length: 347  Bit Score: 48.77  E-value: 3.15e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932  80 VLVLPPWGRLYHWQSPDIHqvrIPWSEFFDLPSLNKNIPVIEYEQFIAESGgPFI---DQ--VYVLQGYAEG------WK 148
Cdd:cd11302   35 TLVLPPWIEYRHGPPPSVQ---IPFDDYFKVEPLQEYHRVITMEDFMEELA-PTIwppGKrkGYCYSPRASPdskdcpMK 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 149 EGT-----WEE-KVD--ERPCIDPLLYSQDKHEYFRGWFWGYEETrglnvsclsvqgSASVIA--------PVLLKNtsa 212
Cdd:cd11302  111 EGNpfgpfWDHfGVDfdGSELYGPLSYDTFYPDVREAWNERFPPS------------EHPVLAftgapasfPVLPEN--- 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 213 rsvmldraeNLLHdhyggreywdtrRSMVFAKHLRAVGDEFRSQHLNstdaadkmvleedwtrmkvklgsalgGPYLGVH 292
Cdd:cd11302  176 ---------RPLH------------KYLEWSDEIVKEADEFINENLP--------------------------RPFVGIH 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 293 LRR-----------KDFIW------------GHREDV------PSLEGAVKKIRSLMKTHQLDKVFVATDAIRkEQEELR 343
Cdd:cd11302  209 LRNgidwknacehvKGTSRnlmaspqclgygNERGTLtkemclPSKEEILKQVKRAVKKIKAKSVFIATDNDH-MIEELK 287
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 164518932 344 KLLPemvrfeptWEELELYK-DGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGL 402
Cdd:cd11302  288 KALK--------SLKVKVVHlDPDEPQIDLAILGKADHFIGNCVSSFSAFVKRERDVAGL 339
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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