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Conserved domains on  [gi|157823932|ref|NP_001101657|]
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PAK4-inhibitor INKA1 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM212 super family cl21185
FAM212 family; This domain family is found in eukaryotes, and is approximately 60 amino acids ...
 146-201 9.18e-25

FAM212 family; This domain family is found in eukaryotes, and is approximately 60 amino acids in length.


The actual alignment was detected with superfamily member pfam15342:

Pssm-ID: 434651  Cd Length: 59  Bit Score: 93.72  E-value: 9.18e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 157823932  146 PRPKSTPDACLEHWQG---LEAEDWTAALLNRGRSRQPLVLGDNCFADLVHNWMELPEA 201
Cdd:pfam15342   1 PRPKSTSDACLEQWQQfeqVEPDDWTSSLLSRSRNRQPLVLGDNCFADLVGNWMDLPEL 59
 
Name Accession Description Interval E-value
FAM212 pfam15342
FAM212 family; This domain family is found in eukaryotes, and is approximately 60 amino acids ...
 146-201 9.18e-25

FAM212 family; This domain family is found in eukaryotes, and is approximately 60 amino acids in length.


Pssm-ID: 434651  Cd Length: 59  Bit Score: 93.72  E-value: 9.18e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 157823932  146 PRPKSTPDACLEHWQG---LEAEDWTAALLNRGRSRQPLVLGDNCFADLVHNWMELPEA 201
Cdd:pfam15342   1 PRPKSTSDACLEQWQQfeqVEPDDWTSSLLSRSRNRQPLVLGDNCFADLVGNWMDLPEL 59
 
Name Accession Description Interval E-value
FAM212 pfam15342
FAM212 family; This domain family is found in eukaryotes, and is approximately 60 amino acids ...
 146-201 9.18e-25

FAM212 family; This domain family is found in eukaryotes, and is approximately 60 amino acids in length.


Pssm-ID: 434651  Cd Length: 59  Bit Score: 93.72  E-value: 9.18e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 157823932  146 PRPKSTPDACLEHWQG---LEAEDWTAALLNRGRSRQPLVLGDNCFADLVHNWMELPEA 201
Cdd:pfam15342   1 PRPKSTSDACLEQWQQfeqVEPDDWTSSLLSRSRNRQPLVLGDNCFADLVGNWMDLPEL 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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