NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|188595653|ref|NP_001120956|]
View 

WW domain binding protein 1-like isoform 1 percursor precursor [Rattus norvegicus]

Protein Classification

WBP-1 domain-containing protein( domain architecture ID 10569435)

WBP-1 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
WBP-1 pfam11669
WW domain-binding protein 1; This family of proteins represents WBP-1, a ligand of the WW ...
 43-144 3.44e-51

WW domain-binding protein 1; This family of proteins represents WBP-1, a ligand of the WW domain of Yes-associated protein. This protein has a proline-rich domain. WBP-1 does not bind to the SH3 domain.


:

Pssm-ID: 463321  Cd Length: 102  Bit Score: 165.83  E-value: 3.44e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188595653   43 YICDTGHCCGQAQCCSHYYELWWFWLVWTIIIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYSALPFYFRFLP 122
Cdd:pfam11669   1 YTCETGHCCGETGCCTYYYELWWFWLVWTLLILLSCCCAYHHRRAELRLEQQRRQREINLIAYREACNYLSLPIDARFLA 80

                          90       100
                  ....*....|....*....|..
gi 188595653  123 NYLLPPYEEVVNRPPTPPPPYS 144
Cdd:pfam11669  81 SFKLPSYEEVANRPNTPPPPYS 102
 
Name Accession Description Interval E-value
WBP-1 pfam11669
WW domain-binding protein 1; This family of proteins represents WBP-1, a ligand of the WW ...
 43-144 3.44e-51

WW domain-binding protein 1; This family of proteins represents WBP-1, a ligand of the WW domain of Yes-associated protein. This protein has a proline-rich domain. WBP-1 does not bind to the SH3 domain.


Pssm-ID: 463321  Cd Length: 102  Bit Score: 165.83  E-value: 3.44e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188595653   43 YICDTGHCCGQAQCCSHYYELWWFWLVWTIIIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYSALPFYFRFLP 122
Cdd:pfam11669   1 YTCETGHCCGETGCCTYYYELWWFWLVWTLLILLSCCCAYHHRRAELRLEQQRRQREINLIAYREACNYLSLPIDARFLA 80

                          90       100
                  ....*....|....*....|..
gi 188595653  123 NYLLPPYEEVVNRPPTPPPPYS 144
Cdd:pfam11669  81 SFKLPSYEEVANRPNTPPPPYS 102
 
Name Accession Description Interval E-value
WBP-1 pfam11669
WW domain-binding protein 1; This family of proteins represents WBP-1, a ligand of the WW ...
 43-144 3.44e-51

WW domain-binding protein 1; This family of proteins represents WBP-1, a ligand of the WW domain of Yes-associated protein. This protein has a proline-rich domain. WBP-1 does not bind to the SH3 domain.


Pssm-ID: 463321  Cd Length: 102  Bit Score: 165.83  E-value: 3.44e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 188595653   43 YICDTGHCCGQAQCCSHYYELWWFWLVWTIIIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYSALPFYFRFLP 122
Cdd:pfam11669   1 YTCETGHCCGETGCCTYYYELWWFWLVWTLLILLSCCCAYHHRRAELRLEQQRRQREINLIAYREACNYLSLPIDARFLA 80

                          90       100
                  ....*....|....*....|..
gi 188595653  123 NYLLPPYEEVVNRPPTPPPPYS 144
Cdd:pfam11669  81 SFKLPSYEEVANRPNTPPPPYS 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH