NCBI Conserved Domain Search

Conserved domains on [gi|735997422|ref|NP_001121181|]

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proteoglycan 4 isoform C preproprotein [Homo sapiens]

Protein Classification

SO and HX domain-containing protein( domain architecture ID 10640906)

SO and HX domain-containing protein

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1050-1310

1.08e-44

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.08e-44

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1050 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1128
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1129 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1207
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1208 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1287
Cdd:cd00094   137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                         250       260
                  ....*....|....*....|...
gi 735997422 1288 PSRTARAITTRSGqtlSKVWYNC 1310
Cdd:cd00094   175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247 super family

cl33720

large tegument protein UL36; Provisional

304-814

1.34e-24

large tegument protein UL36; Provisional

The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 112.34 E-value: 1.34e-24

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  304 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKpapTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 383
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPD---EPVGEPVHPRMLTWIRGLEELASDDAGDPPP 2553

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  384 TTPKEPAPTAPKKPAPttPKEPAPtTPKEPAPTTTKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 458
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  459 PSPTTTKEPAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 537
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  538 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPaPTTPKEPAPTTPKEPAPTTPKETAPTTPK 617
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  618 GTAPTTLKEPAPTTPKK-PAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT-----------------PKE 679
Cdd:PHA03247 2790 SLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrpPSR 2869

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  680 PAPTTPKGTA-PTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 758
Cdd:PHA03247 2870 SPAAKPAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 735997422  759 PTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 814
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.16e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.16e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997422     66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVK 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.30e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.30e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997422     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

kgd super family

cl39092

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

266-339

5.46e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

The actual alignment was detected with superfamily member PRK12270:

Pssm-ID: 476867 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 5.46e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997422  266 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP 339
Cdd:PRK12270   46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1050-1310

1.08e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.08e-44

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1050 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1128
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1129 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1207
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1208 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1287
Cdd:cd00094   137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                         250       260
                  ....*....|....*....|...
gi 735997422 1288 PSRTARAITTRSGqtlSKVWYNC 1310
Cdd:cd00094   175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

304-814

1.34e-24

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 112.34 E-value: 1.34e-24

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  304 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKpapTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 383
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPD---EPVGEPVHPRMLTWIRGLEELASDDAGDPPP 2553

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  384 TTPKEPAPTAPKKPAPttPKEPAPtTPKEPAPTTTKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 458
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  459 PSPTTTKEPAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 537
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  538 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPaPTTPKEPAPTTPKEPAPTTPKETAPTTPK 617
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  618 GTAPTTLKEPAPTTPKK-PAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT-----------------PKE 679
Cdd:PHA03247 2790 SLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrpPSR 2869

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  680 PAPTTPKGTA-PTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 758
Cdd:PHA03247 2870 SPAAKPAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 735997422  759 PTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 814
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.16e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.16e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997422     66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVK 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.30e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.30e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997422     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.63e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.63e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 735997422    69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.81e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.81e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 735997422    29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1102-1146

9.00e-11

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.00e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 735997422   1102 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1146
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1102-1144

9.95e-09

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 9.95e-09

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 735997422  1102 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1144
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

Streccoc_I_II

NF033804

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ...

656-813

5.36e-07

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.

Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 54.56 E-value: 5.36e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  656 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 733
Cdd:NF033804  825 PKITKEKPTPPVAPTAPQAPTYEVEKPLEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEP 904

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  734 AP--TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTP 811
Cdd:NF033804  905 TPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTP 981


                  ..
gi 735997422  812 AA 813
Cdd:NF033804  982 PA 983

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

281-659

1.40e-06

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.85 E-value: 1.40e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   281 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT--TPKEPAPTTPKKPA--PTTPK 356
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQPMtqPPPPS 259

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   357 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKS 436
Cdd:pfam03154  260 QVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP 339

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   437 APTTTKEPAPTTTKSAPTTPKEPSPTTtkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTttkkpapttpkepa 516
Cdd:pfam03154  340 PREQPLPPAPLSMPHIKPPPTTPIPQL---PNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSL-------------- 402

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   517 pTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPA 596
Cdd:pfam03154  403 -STHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGP 481

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997422   597 PTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 659
Cdd:pfam03154  482 PTSTSSAMPGIqPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

286-494

4.33e-06

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 51.20 E-value: 4.33e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  286 KEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepapttPKE 365
Cdd:COG5665   276 TNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASG---NPSAPSVLINSDSPTSEDPATASVPTT----------EET 342

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  366 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 445
Cdd:COG5665   343 TAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGGTASSPMPPNIAIGAKDDVDATDPS 422

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 735997422  446 PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPT 494
Cdd:COG5665   423 QEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPN 471

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

291-357

7.55e-06

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 49.89 E-value: 7.55e-06

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422   291 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT-PKKPAPTTPKE 357
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSS 142

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

578-707

2.56e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 47.84 E-value: 2.56e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  578 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 657
Cdd:NF040712  200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGE 279

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 735997422  658 PTTPKGTAPTTPKEPAPTTPKEPA-PTTPKGTAPTTLKEPAPTTPKKPAPK 707
Cdd:NF040712  280 PPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPPAPKPKRRRRR 330

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

380-496

3.18e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.37 E-value: 3.18e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  380 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkePAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKE 458
Cdd:NF040712  208 EPADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPaPGA 285

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 735997422  459 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Cdd:NF040712  286 AETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

266-339

5.46e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 5.46e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997422  266 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP 339
Cdd:PRK12270   46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

284-426

8.08e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.22 E-value: 8.08e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  284 TPKEPAPTTTKSAPTTPkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT--PKEPAPTTPKKPAPTTPKEPAPT 361
Cdd:NF040712  191 DFGRPLRPLATVPRLAR-EPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997422  362 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 426
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

290-426

1.27e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.45 E-value: 1.27e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  290 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPT 369
Cdd:NF040712  190 PDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 735997422  370 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTtpkEPAPTTPKEPAPTTTKEPSPTTP 426
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPA---APAAPAAPEAEEPARPEPPPAPK 323

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

218-357

1.41e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.91 E-value: 1.41e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  218 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPAlTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP 297
Cdd:COG3266   236 AAEVLTARLVLLLLIIGSALKAPSQASSASAPA-TTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAP 314

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  298 TTPKEPAPTTTKepapttPKEPAPTTTKEPAPTTTKSApttpkePAPTTPKKPAPTTPKE 357
Cdd:COG3266   315 AEAAAPQPTAAK------PVVTETAAPAAPAPEAAAAA------AAPAAPAVAKKLAADE 362

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

416-785

2.02e-03

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.02e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  416 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPkepAPTTPKKPAPTTPKEPAPTT 495
Cdd:NF033839  119 STSKSQLQKLMMESQSKVDEAVSKFEKDSSSSSSSGSSTKPETPQPENPEHQKPTTP---APDTKPSPQPEGKKPSVPDI 195

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  496 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT 575
Cdd:NF033839  196 NQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKF 275

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  576 PKAAAPNTPKEP------APTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 648
Cdd:NF033839  276 KKGLTQDTPKEPgnkkpsAPKPGMQPSPQPEKKEVKPEPETPKPeVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  649 TSTTSDKPApTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK-KPAPKELAPTTTKGPTSTTSD-KPA 726
Cdd:NF033839  356 PQPEKPKPE-VKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEvKPQ 434

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997422  727 PTTPK---ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTP 785
Cdd:NF033839  435 PEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKP 496

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

233-479

2.07e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.07e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  233 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP-APTTTKEP 311
Cdd:NF033839  277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKP 356

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  312 APTTPKEPAPTTTKEPAPTTtKSAPTTPK---EPAPTTPK---KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 385
Cdd:NF033839  357 QPEKPKPEVKPQPEKPKPEV-KPQPETPKpevKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  386 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
Cdd:NF033839  436 EKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN 515

                         250
                  ....*....|....
gi 735997422  466 EPAPTTPKEPAPTT 479
Cdd:NF033839  516 EKATNKPKKSLPST 529

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

280-347

9.11e-03

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems.

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.99 E-value: 9.11e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  280 SAPTTPKEPAPTTTkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP 347
Cdd:NF041121   19 AAPPSPEGPAPTAA-SQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAP 85

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1050-1310

1.08e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.08e-44

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1050 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1128
Cdd:cd00094     1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1129 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1207
Cdd:cd00094    79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422 1208 rRRFERAigpsqthtiriqysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1287
Cdd:cd00094   137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                         250       260
                  ....*....|....*....|...
gi 735997422 1288 PSRTARAITTRSGqtlSKVWYNC 1310
Cdd:cd00094   175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

304-814

1.34e-24

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 112.34 E-value: 1.34e-24

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  304 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKpapTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 383
Cdd:PHA03247 2477 APVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPD---EPVGEPVHPRMLTWIRGLEELASDDAGDPPP 2553

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  384 TTPKEPAPTAPKKPAPttPKEPAPtTPKEPAPTTTKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 458
Cdd:PHA03247 2554 PLPPAAPPAAPDRSVP--PPRPAP-RPSEPAVTSRARrpdapPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS 2630

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  459 PSPTTTKEPAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 537
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDdPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  538 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPaPTTPKEPAPTTPKEPAPTTPKETAPTTPK 617
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  618 GTAPTTLKEPAPTTPKK-PAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT-----------------PKE 679
Cdd:PHA03247 2790 SLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrpPSR 2869

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  680 PAPTTPKGTA-PTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPP 758
Cdd:PHA03247 2870 SPAAKPAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDP 2949

                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 735997422  759 PTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 814
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVS 3005

PHA03247

large tegument protein UL36; Provisional

280-746

4.55e-24

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 110.80 E-value: 4.55e-24

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPaPTTTKSAPT-----TPKEPAP-------------TTTKEPAPTTPKEPAPtttkePAPTTTKSAPttPKE 341
Cdd:PHA03247 2501 GGPPDPDAP-PAPSRLAPAilpdePVGEPVHprmltwirgleelASDDAGDPPPPLPPAA-----PPAAPDRSVP--PPR 2572

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  342 PAPtTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAP-------------TTPKEPAPT 408
Cdd:PHA03247 2573 PAP-RPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPspspaanepdphpPPTVPPPER 2651

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  409 TPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-----TPKEPAPTTPKKP 483
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHalvsaTPLPPGPAAARQA 2731

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  484 APTTPKEPAP----TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeelaptt 559
Cdd:PHA03247 2732 SPALPAAPAPpavpAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDP------- 2804

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  560 peEPTPTTPEEPAPTTPKAAAPNTPkEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGT----APTTLKEPAPTTPKKP 635
Cdd:PHA03247 2805 --ADPPAAVLAPAAALPPAASPAGP-LPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARP 2881

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  636 APKELAPTTTKEPTSTTSDKP-APTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTT 714
Cdd:PHA03247 2882 PVRRLARPAVSRSTESFALPPdQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ 2961

                         490       500       510
                  ....*....|....*....|....*....|...
gi 735997422  715 KGPTSTTSDKPAPTTPKETAPTTPKE-PAPTTP 746
Cdd:PHA03247 2962 PWLGALVPGRVAVPRFRVPQPAPSREaPASSTP 2994

PHA03247

large tegument protein UL36; Provisional

285-743

3.94e-22

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 104.25 E-value: 3.94e-22

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  285 PKEPAPTTTKSAPTTPKEPAPTTTK-----EPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 359
Cdd:PHA03247 2577 PSEPAVTSRARRPDAPPQSARPRAPvddrgDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDP 2656

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  360 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 439
Cdd:PHA03247 2657 APGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  440 ttKEPAPTTTKSAPTTPKEPSPtttkepaptTPKEPAPTTPkkPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTT 519
Cdd:PHA03247 2737 --AAPAPPAVPAGPATPGGPAR---------PARPPTTAGP--PAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWD 2803

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  520 PKETAPTTPKKLTpttpeklAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPttPKEPAPTT 599
Cdd:PHA03247 2804 PADPPAAVLAPAA-------ALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRP--PSRSPAAK 2874

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  600 PKEPA-PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkeptsttsdkPAPTTPKGTAPTTPKE-PAPTTP 677
Cdd:PHA03247 2875 PAAPArPPVRRLARPAVSRSTESFALPPDQPERPPQPQA------------------PPPPQPQPQPPPPPQPqPPPPPP 2936

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997422  678 KEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAP 743
Cdd:PHA03247 2937 PRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.16e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.16e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997422     66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVK 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.30e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.30e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 735997422     26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.63e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.63e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 735997422    69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

PHA03247

large tegument protein UL36; Provisional

311-822

1.25e-17

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 89.61 E-value: 1.25e-17

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  311 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKepAPTTPKKPAPT-----TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 385
Cdd:PHA03247 2478 PVYRRPAEARFPFAAGAAPDPGGGGPPDPD--APPAPSRLAPAilpdePVGEPVHPRMLTWIRGLEELASDDAGDPPPPL 2555

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  386 PKEPAPTAPKKPAPttPKEPAPTtPKEPApTTTKEPSPTTPKEPAPtttksaptttkepaptttksaPTTPKEPsptttk 465
Cdd:PHA03247 2556 PPAAPPAAPDRSVP--PPRPAPR-PSEPA-VTSRARRPDAPPQSAR---------------------PRAPVDD------ 2604

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  466 epaPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 545
Cdd:PHA03247 2605 ---RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQ 2681

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  546 KPAPttpeelapttpeeptpttpeepapttpkaaaPNTPKEPAPTTPKEPAPTTPKEPAPTtPKETAPTTPKGTAPTTLK 625
Cdd:PHA03247 2682 RPRR-------------------------------RAARPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGPAAAR 2729

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  626 EPAPTTPKKPAPKELAPTTTKeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPA 705
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPAT---------PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS 2800

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  706 PKELAPTT----TKGPTSTTSDKPAPTTPKET-----APTTPKEPAPTT------------------PKKPAPTTPETPP 758
Cdd:PHA03247 2801 PWDPADPPaavlAPAAALPPAASPAGPLPPPTsaqptAPPPPPGPPPPSlplggsvapggdvrrrppSRSPAAKPAAPAR 2880

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  759 PTTSEVSTPTTTKEPTTIHKSPDE----STPELSAEPTPKALENSPKEPgVPTTKTPAATKPEMTTTA 822
Cdd:PHA03247 2881 PPVRRLARPAVSRSTESFALPPDQperpPQPQAPPPPQPQPQPPPPPQP-QPPPPPPPRPQPPLAPTT 2947

PHA03247

large tegument protein UL36; Provisional

290-617

3.71e-17

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 88.07 E-value: 3.71e-17

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  290 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPT---TPKEPAPTTPKEP 366
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPaapAPPAVPAGPATPG 2752

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  367 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 446
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT 2832

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  447 TTTKSAPTTPKEPSPTTTKEPAPTTPKEP----APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 522
Cdd:PHA03247 2833 SAQPTAPPPPPGPPPPSLPLGGSVAPGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQ 2912

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  523 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPeeLAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPkEPAPTTPKe 602
Cdd:PHA03247 2913 APPPPQPQPQPPPPPQPQPPPPPPPRPQPP--LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVP-QPAPSREA- 2988

                         330
                  ....*....|....*
gi 735997422  603 PAPTTPKETAPTTPK 617
Cdd:PHA03247 2989 PASSTPPLTGHSLSR 3003

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.81e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.81e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 735997422    29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1102-1146

9.00e-11

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.00e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 735997422   1102 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1146
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

PRK12323

DNA polymerase III subunit gamma/tau;

295-496

9.77e-11

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 66.44 E-value: 9.77e-11

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  295 SAPTTPKE-PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepaptTPKEPTPTTPKE 373
Cdd:PRK12323  372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAP---------EALAAARQASAR 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  374 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPK---EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 450
Cdd:PRK12323  443 GPGGAPAPAPAPAAAPAAAARPAAAGPRPVaaaAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWV 522

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 735997422  451 SAPTtpkePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP--APTTP 496
Cdd:PRK12323  523 AESI----PDPATADPDDAFETLAPAPAAAPAPRAAAATEPvvAPRPP 566

PRK07764

DNA polymerase III subunits gamma and tau; Validated

287-498

9.58e-09

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.00 E-value: 9.58e-09

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  287 EPAPTTTKSAPTTPKEPAPtttKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 366
Cdd:PRK07764  587 VVGPAPGAAGGEGPPAPAS---SGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  367 TPTtpkepapttkEPAPTTPKEPAPTAPKkPAPTTPKEPAPTTPKEPAPTTTkePSPTTPKEPAPTTTKSAPTTTKEPAP 446
Cdd:PRK07764  664 DGG----------DGWPAKAGGAAPAAPP-PAPAPAAPAAPAGAAPAQPAPA--PAATPPAGQADDPAAQPPQAAQGASA 730

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 735997422  447 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 498
Cdd:PRK07764  731 PSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1102-1144

9.95e-09

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 9.95e-09

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 735997422  1102 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1144
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

PHA03247

large tegument protein UL36; Provisional

387-987

1.31e-08

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 59.95 E-value: 1.31e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  387 KEPAPTAPKKPAPTTPKEPAPTTPKePAPTTTKEPSPTTPKEPAPTTTKS-APTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
Cdd:PHA03247 2471 GELFPGAPVYRRPAEARFPFAAGAA-PDPGGGGPPDPDAPPAPSRLAPAIlPDEPVGEPVHPRMLTWIRGLEELASDDAG 2549

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  466 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpaPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 545
Cdd:PHA03247 2550 DPPPPLPPAAPPAAPDRSVPPPRPAPRPSEP------------AVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPL 2617

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  546 KPAPTTPEelapttpeeptpttpeepAPTTPKAAAPNTPKEPAPTtPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlk 625
Cdd:PHA03247 2618 PPDTHAPD------------------PPPPSPSPAANEPDPHPPP-TVPPPERPRDDPAPGRVSRPRRARRLGRAAQ--- 2675

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  626 epAPTTPKKPAPKELaptttkeptsttSDKPAPTTPKGTAPTTPKEPAPTtPKEPAPTTPKGTAPTTLKEPAPTTPKKPA 705
Cdd:PHA03247 2676 --ASSPPQRPRRRAA------------RPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGPAAARQASPALPAAPA 2740

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  706 PKELAPTTTKgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVStptttkepttihkSPDESTP 785
Cdd:PHA03247 2741 PPAVPAGPAT---------PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASL-------------SESRESL 2798

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  786 ELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAkdktterdlrttpetttaapkmtketatttekTTESKITATTT 865
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ--------------------------------PTAPPPPPGPP 2846

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  866 QVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPeetakPKDRATNSKATTPKPQKPTKAPKKPTSTKKPK 945
Cdd:PHA03247 2847 PPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARP-----AVSRSTESFALPPDQPERPPQPQAPPPPQPQP 2921

                         570       580       590       600
                  ....*....|....*....|....*....|....*....|..
gi 735997422  946 TMPRvrKPKTTPTPRKMTSTMPELNPTSRIAEAMLQTTTRPN 987
Cdd:PHA03247 2922 QPPP--PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ 2961

PRK12323

DNA polymerase III subunit gamma/tau;

266-496

1.50e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.12 E-value: 1.50e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  266 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkEPAPTTTKSAPTTPKEPAPT 345
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL-AAARQASARGPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  346 TPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttkEPSPTT 425
Cdd:PRK12323  454 PAAAPAAAAR-------------------------PAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPW---EELPPE 505

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997422  426 PKEPAPTTTKSAPTTTKepAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Cdd:PRK12323  506 FASPAPAQPDAAPAGWV--AESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574

rne

PRK10811

ribonuclease E; Reviewed

291-476

4.42e-08

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 57.74 E-value: 4.42e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  291 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 370
Cdd:PRK10811  848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAP-VVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTE 926

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  371 PKEPAPTTKEP-APTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT 449
Cdd:PRK10811  927 QPQVITESDVAvAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006

                         170       180
                  ....*....|....*....|....*..
gi 735997422  450 KSAPTTPKEPSPTTTKEPAPTTPKEPA 476
Cdd:PRK10811 1007 PEATVEHNHATAPMTRAPAPEYVPEAP 1033

PRK12323

DNA polymerase III subunit gamma/tau;

391-616

7.01e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.19 E-value: 7.01e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  391 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEpSPTTTKEPAPT 470
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASAR-GPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  471 TPKEPAPTTPkkPAPTTPKEPAPTTPkepaptttkkpapttpkePAPTTPKETAPTTPKKLTPTTPEKLAPTTPEkPAPT 550
Cdd:PRK12323  454 PAAAPAAAAR--PAAAGPRPVAAAAA------------------AAPARAAPAAAPAPADDDPPPWEELPPEFAS-PAPA 512

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997422  551 TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTtpkePAPTTPKETAPTTP 616
Cdd:PRK12323  513 QPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV----VAPRPPRASASGLP 574

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

280-357

7.82e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.21 E-value: 7.82e-08

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 357
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

PRK07994

DNA polymerase III subunits gamma and tau; Validated

339-496

9.40e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 56.41 E-value: 9.40e-08

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  339 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 418
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  419 KEPSPTTPKEPAPTTTKSAPTTtkEPAPTTTKSAPTtPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Cdd:PRK07994  441 SEPAAASRARPVNSALERLASV--RPAPSALEKAPA-KKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515

PRK07003

DNA polymerase III subunit gamma/tau;

302-480

1.24e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 56.40 E-value: 1.24e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  302 EPAPTTTKEPAPTTPKE-----PAPTTTKEPAPTTTKSAPTTPKEPAPT---TPKKPAPTTPKEPAPTTPKEPTPTTPKE 373
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARvagavPAPGARAAAAVGASAVPAVTAVTGAAGaalAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  374 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEpsPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 453
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP--PDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516

                         170       180
                  ....*....|....*....|....*...
gi 735997422  454 TTPKEPSPttTKEPAP-TTPKEPAPTTP 480
Cdd:PRK07003  517 SREDAPAA--AAPPAPeARPPTPAAAAP 542

PRK12323

DNA polymerase III subunit gamma/tau;

578-789

1.36e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.04 E-value: 1.36e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  578 AAAPNTPKEPA--PTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDK 655
Cdd:PRK12323  378 AAAPVAQPAPAaaAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAA 457

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  656 PAPTTPKGTAPttPKEPAPTTPKEPAPTTPkgtAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAP 735
Cdd:PRK12323  458 PAAAARPAAAG--PRPVAAAAAAAPARAAP---AAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 735997422  736 TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSA 789
Cdd:PRK12323  533 DPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPALAA 586

PRK07764

DNA polymerase III subunits gamma and tau; Validated

381-746

1.37e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.15 E-value: 1.37e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK-EP 459
Cdd:PRK07764  403 AAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAApAP 482

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  460 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPK--------ETAPTTPKKL 531
Cdd:PRK07764  483 APPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEATVLGVRgdtlvlgfSTGGLARRFA 562

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  532 TPTTPEKL------------------APTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 593
Cdd:PRK07764  563 SPGNAEVLvtalaeelggdwqveavvGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAA 642

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  594 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPttpkEPA 673
Cdd:PRK07764  643 PAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQAD----DPA 718

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  674 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTP 746
Cdd:PRK07764  719 AQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAP 791

PRK10263

DNA translocase FtsK; Provisional

288-494

1.45e-07

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 56.25 E-value: 1.45e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  288 PAPTTTKSAPTTPKEPA---PTTTKEPAPTtPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepAPTTPK 364
Cdd:PRK10263  336 PVEPVTQTPPVASVDVPpaqPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQ---PYYAPA 411

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  365 EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKE-PSPTTPKEPAPTTTKSAPTTTKE 443
Cdd:PRK10263  412 AEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTyQQPAAQEPLYQQPQPVEQQPVVE 491

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  444 PAPTTTKSAPTTPK----------------------EPSPTTTKEPAPTTPKEPAPTTPKKPapttPKEPAPT 494
Cdd:PRK10263  492 PEPVVEETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVP----PVEAAAA 560

PRK07764

DNA polymerase III subunits gamma and tau; Validated

280-612

2.17e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.38 E-value: 2.17e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTtkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 359
Cdd:PRK07764  400 SAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS--PAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPT 477

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  360 PTTPKEPTPTTPKEPAPttKEPAPTTPKEPAPTAP-----------------------KKPAPT---------------- 400
Cdd:PRK07764  478 AAPAPAPPAAPAPAAAP--AAPAAPAAPAGADDAAtlrerwpeilaavpkrsrktwaiLLPEATvlgvrgdtlvlgfstg 555

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  401 -----------------------------------TPKEPAPTTPKEPAPTT--TKEPSPTTPKEPAPTTTKSAPTTTKE 443
Cdd:PRK07764  556 glarrfaspgnaevlvtalaeelggdwqveavvgpAPGAAGGEGPPAPASSGppEEAARPAAPAAPAAPAAPAPAGAAAA 635

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  444 PAPTTTKSAPTTPkePSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 523
Cdd:PRK07764  636 PAEASAAPAPGVA--APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQ 713

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  524 APTTPKKLTPTTPEKLAPTTPEKPAPTTPEElAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 603
Cdd:PRK07764  714 ADDPAAQPPQAAQGASAPSPAADDPVPLPPE-PDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS 792


                  ....*....
gi 735997422  604 APTTPKETA 612
Cdd:PRK07764  793 MDDEDRRDA 801

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

382-490

2.52e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 55.20 E-value: 2.52e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  382 APTTPKEPAPTAPKKPAPTTPKePAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkEPAPTTTKSAPttPKEPSP 461
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVR----------------ETATPPPVPPR--PVAPPV 421

                          90       100       110
                  ....*....|....*....|....*....|.
gi 735997422  462 TTTKEPAPTTPKE--PAPTTPKKPAPTTPKE 490
Cdd:PRK14950  422 PHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

288-415

2.69e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 55.11 E-value: 2.69e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  288 PAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPT 367
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAV 445

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 735997422  368 PTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkEPAP 415
Cdd:PRK14951  446 ALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARL-TPTE 492

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

381-484

4.10e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.90 E-value: 4.10e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKEPS 460
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAP-----------------PKPAAAAAAAAAPAAPP 100

                          90       100
                  ....*....|....*....|....
gi 735997422  461 PTTTKEPAPTTPKEPAPTTPKKPA 484
Cdd:PRK12270  101 AAAAAAAPAAAAVEDEVTPLRGAA 124

PRK07764

DNA polymerase III subunits gamma and tau; Validated

380-790

4.77e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.22 E-value: 4.77e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  380 EPAPTTPKEPAPTAPKKPAPTtPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPtttKSAPTTPKEP 459
Cdd:PRK07764  391 AGAPAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSP---PPAAAPSAQP 466

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  460 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEK- 538
Cdd:PRK07764  467 APAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEATVLGVRGd 546

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  539 ---LAPTTPEKP----APTTPEELAPT-TPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTP----KEPAPTTPKEPAPT 606
Cdd:PRK07764  547 tlvLGFSTGGLArrfaSPGNAEVLVTAlAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPpeeaARPAAPAAPAAPAA 626

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  607 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGT-APTTPKEPAPTTPKEPAPTTP 685
Cdd:PRK07764  627 PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPApAPAAPAAPAGAAPAQPAPAPA 706

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  686 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVS 765
Cdd:PRK07764  707 ATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMA 786

                         410       420
                  ....*....|....*....|....*
gi 735997422  766 TPTTTKEPTTIHKSPDESTPELSAE 790
Cdd:PRK07764  787 EDDAPSMDDEDRRDAEEVAMELLEE 811

PRK07764

DNA polymerase III subunits gamma and tau; Validated

304-682

4.90e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.22 E-value: 4.90e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  304 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 383
Cdd:PRK07764  389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAP 468

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  384 TTPKEPAPTAPKKPAPTTPKEPAPTtPKEPAPTTTKEPSPTTP------------------KEPAPTTTKSAPTTTKEPA 445
Cdd:PRK07764  469 APAAAPEPTAAPAPAPPAAPAPAAA-PAAPAAPAAPAGADDAAtlrerwpeilaavpkrsrKTWAILLPEATVLGVRGDT 547

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  446 PTTTKSAP----------------------------------TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPkeP 491
Cdd:PRK07764  548 LVLGFSTGglarrfaspgnaevlvtalaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAP--A 625

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  492 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeep 571
Cdd:PRK07764  626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPA----------------- 688

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  572 aptTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTkeptst 651
Cdd:PRK07764  689 ---APAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPP------ 759

                         410       420       430
                  ....*....|....*....|....*....|.
gi 735997422  652 tsdkPAPTTPKGTAPTTPKEPAPTTPKEPAP 682
Cdd:PRK07764  760 ----PPPAPAPAAAPAAAPPPSPPSEEEEMA 786

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

280-357

4.98e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 4.98e-07

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtttksAPTTPKEPAPTTPKKPAPTTPKE 357
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAA-----APAAPPAAAAAAAPAAAAVEDEV 117

Streccoc_I_II

NF033804

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ...

656-813

5.36e-07

Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 54.56 E-value: 5.36e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  656 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 733
Cdd:NF033804  825 PKITKEKPTPPVAPTAPQAPTYEVEKPLEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEP 904

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  734 AP--TTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTP 811
Cdd:NF033804  905 TPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTP 981


                  ..
gi 735997422  812 AA 813
Cdd:NF033804  982 PA 983

PHA03307

transcriptional regulator ICP4; Provisional

280-689

5.44e-07

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 54.41 E-value: 5.44e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPkepa 359
Cdd:PHA03307   61 ACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP-----PPTPPPASPPPSPA---- 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  360 ptTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTApkkPAPTTPKEPAPTTPKEPAPtttkEPSPTTPKEPAptttksapt 439
Cdd:PHA03307  132 --PDLSEMLRPVGSPGPPPAASPPAAGASPAAVA---SDAASSRQAALPLSSPEET----ARAPSSPPAEP--------- 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  440 tTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTtpkePAPTT 519
Cdd:PHA03307  194 -PPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPI----TLPTR 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  520 PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAA---APNTPKEPAPTTPKEPA 596
Cdd:PHA03307  269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSStssSSESSRGAAVSPGPSPS 348

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  597 PTtpkePAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKepAPTT 676
Cdd:PHA03307  349 RS----PSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLD--AGAA 422

                         410
                  ....*....|...
gi 735997422  677 PKEPAPTTPKGTA 689
Cdd:PHA03307  423 SGAFYARYPLLTP 435

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

655-747

6.76e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 6.76e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  655 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkgptstTSDKPAPTTPKETA 734
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-------------AAAAAAPAAPPAAA 103

                          90
                  ....*....|...
gi 735997422  735 PTTPKEPAPTTPK 747
Cdd:PRK12270  104 AAAAPAAAAVEDE 116

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

321-430

7.17e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.13 E-value: 7.17e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  321 PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkEPAPTTPKEPAPTAPKKPAPT 400
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPA-----------------------PPAAAAPAAPPKPAAAAAAAA 94

                          90       100       110
                  ....*....|....*....|....*....|
gi 735997422  401 TPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 430
Cdd:PRK12270   95 APAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

282-415

7.69e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 53.56 E-value: 7.69e-07

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  282 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPT 361
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAA---PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 735997422  362 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkKPAPTTPKEPAPTTPKEPAP 415
Cdd:PRK14951  443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASA-APAPAAAPAAARLTPTEEGD 495

PHA03307

transcriptional regulator ICP4; Provisional

228-637

1.33e-06

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 53.25 E-value: 1.33e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  228 LAPTSKVLAKPTPKAettTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPtt 307
Cdd:PHA03307   43 LVSDSAELAAVTVVA---GAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP-- 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  308 tkePAPTTPKEPAPTttkePAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPK 387
Cdd:PHA03307  118 ---PPTPPPASPPPS----PAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPP 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  388 EPAP--TAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
Cdd:PHA03307  191 AEPPpsTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIW 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  466 EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEpaptttkkpapttPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPE 545
Cdd:PHA03307  271 EASGWNGPSSRPGPASSSSSPRERSPSPSPSSP-------------GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSR 337

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  546 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLK 625
Cdd:PHA03307  338 GAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPL 417

                         410
                  ....*....|..
gi 735997422  626 EPAPTTPKKPAP 637
Cdd:PHA03307  418 DAGAASGAFYAR 429

PRK07994

DNA polymerase III subunits gamma and tau; Validated

285-463

1.39e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 52.56 E-value: 1.39e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  285 PKEPAPtttksAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepaptTPK 364
Cdd:PRK07994  361 PAAPLP-----EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLL---------AAR 426

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  365 EPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPtttKEPSPTTPKEPAptttksAPTTTKEP 444
Cdd:PRK07994  427 QQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRP--APSALEKAPAK---KEAYRWKATNPV------EVKKEPVA 495

                         170
                  ....*....|....*....
gi 735997422  445 APTTTKSAPTTPKEPSPTT 463
Cdd:PRK07994  496 TPKALKKALEHEKTPELAA 514

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

281-659

1.40e-06

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 52.85 E-value: 1.40e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   281 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT--TPKEPAPTTPKKPA--PTTPK 356
Cdd:pfam03154  180 AASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPLQPMtqPPPPS 259

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   357 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKS 436
Cdd:pfam03154  260 QVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQP 339

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   437 APTTTKEPAPTTTKSAPTTPKEPSPTTtkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTttkkpapttpkepa 516
Cdd:pfam03154  340 PREQPLPPAPLSMPHIKPPPTTPIPQL---PNPQSHKHPPHLSGPSPFQMNSNLPPPPALKPLSSL-------------- 402

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   517 pTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPA 596
Cdd:pfam03154  403 -STHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGP 481

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997422   597 PTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 659
Cdd:pfam03154  482 PTSTSSAMPGIqPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPRSPSPEPT 545

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

577-639

1.42e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.42e-06

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  577 KAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 639
Cdd:PRK12270   52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

PRK07003

DNA polymerase III subunit gamma/tau;

318-496

1.77e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.54 E-value: 1.77e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  318 EPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 397
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  398 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP----K 473
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPaaasR 518

                         170       180
                  ....*....|....*....|....
gi 735997422  474 EPAPTTPKKPAP-TTPKEPAPTTP 496
Cdd:PRK07003  519 EDAPAAAAPPAPeARPPTPAAAAP 542

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

406-498

1.88e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 1.88e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  406 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTttkEPAPTTPKEPAPTTPKK--P 483
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPV---APPVPHTPESAPKLTRAaiP 437

                          90
                  ....*....|....*
gi 735997422  484 APTTPKEPAPTTPKE 498
Cdd:PRK14950  438 VDEKPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

603-694

2.01e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.59 E-value: 2.01e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  603 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 682
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

                          90
                  ....*....|..
gi 735997422  683 TTPKGTAPTTLK 694
Cdd:PRK12270  118 TPLRGAAAAVAK 129

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

420-498

2.24e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 2.24e-06

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997422  420 EPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 498
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

281-357

2.29e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.12 E-value: 2.29e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  281 APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAP-----TTPKEPAPTTTKEPAPTTTKSAPTTPKE--PAPTTPKKPAPT 353
Cdd:PRK14950  369 AKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEpvretATPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPA 448


                  ....
gi 735997422  354 TPKE 357
Cdd:PRK14950  449 PPKE 452

PRK12323

DNA polymerase III subunit gamma/tau;

381-555

2.30e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 52.19 E-value: 2.30e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPS 460
Cdd:PRK12323  385 PAPAAAAPAAAAPAPAAPPAAP--AAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  461 PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA 540
Cdd:PRK12323  463 RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLA 542

                         170
                  ....*....|....*
gi 735997422  541 PTTPEKPAPTTPEEL 555
Cdd:PRK12323  543 PAPAAAPAPRAAAAT 557

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

381-496

2.63e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 2.63e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKEPAPTAP-KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Cdd:PRK14951  376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQA 455

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 735997422  460 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Cdd:PRK14951  456 APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

595-697

2.82e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 2.82e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  595 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkeptstTSDKPAPTTPKGTAPTTPKEPAP 674
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPA-------------APPKPAAAAAAAAAPAAPPAAAA 104

                          90       100
                  ....*....|....*....|...
gi 735997422  675 TTPKEPAPTTPKgtaPTTLKEPA 697
Cdd:PRK12270  105 AAAPAAAAVEDE---VTPLRGAA 124

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

578-695

3.04e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.64 E-value: 3.04e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  578 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTtpkgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 657
Cdd:PRK14951  378 KKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAP----AAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 735997422  658 PTTPKGTAP--TTPKEPAPTTPKEPAPTTPKGTAPTTLKE 695
Cdd:PRK14951  454 QAAPETVAIpvRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

320-416

3.31e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.81 E-value: 3.31e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  320 APTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPApttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAP 399
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAA---------------------AAPAAPPKPAAAAAAAAAP 96

                          90
                  ....*....|....*..
gi 735997422  400 TTPKEPAPTTPKEPAPT 416
Cdd:PRK12270   97 AAPPAAAAAAAPAAAAV 113

PRK07003

DNA polymerase III subunit gamma/tau;

280-496

3.51e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.39 E-value: 3.51e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTttkSAPTTPKEPAPTTPKKPAPTTPKEPA 359
Cdd:PRK07003  407 GAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARA---SADSRCDERDAQPPADSGSASAPASD 483

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  360 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPApTAPKKPAPTTPKEPAPTTPkEPAPTTTKEPSPTTPKEPA----PTTTK 435
Cdd:PRK07003  484 APPDAAFEPAPRAAAPSAATPAAVPDARAPA-AASREDAPAAAAPPAPEAR-PPTPAAAAPAARAGGAAAAldvlRNAGM 561

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997422  436 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT-TPKEPAPTTPKKPAPTTPKEPAPTTP 496
Cdd:PRK07003  562 RVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVpTPRARAATGDAPPNGAARAEQAAESR 623

Not5

COG5665

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

286-494

4.33e-06

CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];

Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 51.20 E-value: 4.33e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  286 KEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTttkEPAPTTTKSAPTTPKEPAPTTPKKPAPttpkepapttPKE 365
Cdd:COG5665   276 TNQLTTSNTPTSTAKAQPQPPTKKQPAKEPPSDTASG---NPSAPSVLINSDSPTSEDPATASVPTT----------EET 342

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  366 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 445
Cdd:COG5665   343 TAFTTPSSVPSTPAEKDTPATDLATPVSPTPPETSVDKKVSPDSATSSTKSEKEGGTASSPMPPNIAIGAKDDVDATDPS 422

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 735997422  446 PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPT 494
Cdd:COG5665   423 QEAKEYTKNAPMTPEADSAPESSVRTEASPSAGSDLEPENTTLRDPAPN 471

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

280-404

4.35e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.96 E-value: 4.35e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKePAPTTtkepAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepa 359
Cdd:PRK14950  345 SYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPT-PAPST----RPKAAAAANIPPKEPVRETATPPPVPPR---- 415

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 735997422  360 pttpkeptptTPKEPAPTTKEPAPTTPKE--PAPTAPKKPAPTTPKE 404
Cdd:PRK14950  416 ----------PVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK07994

DNA polymerase III subunits gamma and tau; Validated

280-423

4.60e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 51.02 E-value: 4.60e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP--KEPAPTTPKKPAPTTPKE 357
Cdd:PRK07994  369 EVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAAASR 448

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997422  358 PAPTTPKEPTPTTPKEPAPTTkePAPTTPKEPAPTAPKKPAPTtpKEPAPTTPKEPAPTTTKEPSP 423
Cdd:PRK07994  449 ARPVNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510

PRK12323

DNA polymerase III subunit gamma/tau;

493-692

5.09e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.03 E-value: 5.09e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  493 PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 572
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  573 PTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPtTPKKPAPKELAPTTTKEPTSTT 652
Cdd:PRK12323  455 AAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP-AQPDAAPAGWVAESIPDPATAD 533

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 735997422  653 SDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 692
Cdd:PRK12323  534 PDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGL 573

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

305-419

6.19e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 6.19e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  305 PTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkEPAPT 384
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-----------------------AAAAA 94

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 735997422  385 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTK 419
Cdd:PRK12270   95 APAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

291-357

7.55e-06

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 49.89 E-value: 7.55e-06

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422   291 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT-PKKPAPTTPKE 357
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVPSS 142

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

280-627

7.72e-06

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 50.34 E-value: 7.72e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPaptttkepaPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 359
Cdd:pfam17823   98 SEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAAL---------PSEAFSAPRAAACRANASAAPRAAIAAASAP 168

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   360 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 439
Cdd:pfam17823  169 HAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTV 248

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   440 TTKEPApTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTtpkkPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEpapTT 519
Cdd:pfam17823  249 TPAALA-TLAAAAGTVASAAGTINMGDPHARRLSPAKHM----PSDTMARNPAAPMGAQAQGPIIQVSTDQPVHN---TA 320

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   520 PKETAPTTPKKLTPTTPEKLAPTTpekPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 599
Cdd:pfam17823  321 GEPTPSPSNTTLEPNTPKSVASTN---LAVVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSPLLPTQGAAGPGI 397

                          330       340
                   ....*....|....*....|....*...
gi 735997422   600 PKEPAPTTPKETAPTTPKGTAPTTLKEP 627
Cdd:pfam17823  398 LLAPEQVATEATAGTASAGPTPRSSGDP 425

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

444-523

8.39e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.66 E-value: 8.39e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  444 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 523
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118

PRK07994

DNA polymerase III subunits gamma and tau; Validated

382-545

9.25e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 50.25 E-value: 9.25e-06

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  382 APTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttkEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPsp 461
Cdd:PRK07994  367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPP---PPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS-- 441

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  462 tttkEPAPTTPKEPAPTTPKKPAPTTP-KEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA 540
Cdd:PRK07994  442 ----EPAAASRARPVNSALERLASVRPaPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLA 517


                  ....*
gi 735997422  541 PTTPE 545
Cdd:PRK07994  518 AEAIE 522

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

580-686

1.14e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.81 E-value: 1.14e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  580 APNTPKEPAPTTPKEPAPTTPKePAPTTPKETAPTTPkgtAPTTLKEPAPTTPKKPAPKELAptttkeptsttsdkPAPT 659
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAAN---IPPKEPVRETATPPPVPPRPVA--------------PPVP 422

                          90       100
                  ....*....|....*....|....*....
gi 735997422  660 TPKGTAPTTPKE--PAPTTPKEPAPTTPK 686
Cdd:PRK14950  423 HTPESAPKLTRAaiPVDEKPKYTPPAPPK 451

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

301-617

1.20e-05

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 50.07 E-value: 1.20e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  301 KEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSApTTPKEPapttpKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKE 380
Cdd:PTZ00449  506 KHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKES-DEPKEG-----GKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKP 579

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKEPA-PTAPKKP-APTTPKEP-APTTPKEPA----PTTTKEP-SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA 452
Cdd:PTZ00449  580 EFPKDPKHPKdPEEPKKPkRPRSAQRPtRPKSPKLPElldiPKSPKRPeSPKSPKRPPPPQRPSSPERPEGPKIIKSPKP 659

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  453 PTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA--PTTPKETapttpkk 530
Cdd:PTZ00449  660 PKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPklPRDEEFP------- 732

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  531 lTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKaaapnTPKEPAPTTPKEPAPTTPKEPAPTTPKE 610
Cdd:PTZ00449  733 -FEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFK-----EEDIHAETGEPDEAMKRPDSPSEHEDKP 806


                  ....*....
gi 735997422  611 TA--PTTPK 617
Cdd:PTZ00449  807 PGdhPSLPK 815

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

312-428

1.23e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.42 E-value: 1.23e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  312 APTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkEPAPTTPKEPAP 391
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVR------------------------ETATPPPVPPRP 416

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 735997422  392 TAPKKPaptTPKEPAPTTPKE--PAPTTTKEPSPTTPKE 428
Cdd:PRK14950  417 VAPPVP---HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

578-639

1.56e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.50 E-value: 1.56e-05

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997422  578 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 639
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA 106

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

588-695

1.75e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 49.04 E-value: 1.75e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  588 APTTPKEPAPTTPKEPAPTTPKeTAPTTPKGTAPTTLKEPAPTTPKkPAPKElaptttkeptsttsdkPAPTTPKGTAPT 667
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRE-TATPP----------------PVPPRPVAPPVP 422

                          90       100       110
                  ....*....|....*....|....*....|
gi 735997422  668 TPKEPAPTTPKE--PAPTTPKGTAPTTLKE 695
Cdd:PRK14950  423 HTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

422-498

1.81e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.50 E-value: 1.81e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997422  422 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPtttkePAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKE 498
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAA-----AAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109

PRK08691

DNA polymerase III subunits gamma and tau; Validated

282-466

1.88e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 48.94 E-value: 1.88e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  282 PTTPKEPAPTTTKSAPTTP-------------KEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPk 348
Cdd:PRK08691  388 ETAAKKPQPRPEAETAQTPvqtasaaampsegKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQTSAKSIQTASEAETP- 466

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  349 kpapttPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP-KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK 427
Cdd:PRK08691  467 ------PENQVSKNKAADNETDAPLSEVPSENPIQATPnDEAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDW 540

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 735997422  428 EPAPTTTKSAPTTTKEPAPTTTKSaPTTPKEPSPTTTKE 466
Cdd:PRK08691  541 EHAAPADTAGGGADEEAEAGGIGG-NNTPSAPPPEFSTE 578

PRK12323

DNA polymerase III subunit gamma/tau;

224-417

1.99e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.10 E-value: 1.99e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  224 SAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKeP 303
Cdd:PRK12323  378 AAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPA-A 456

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  304 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT-TPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 382
Cdd:PRK12323  457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDD 536

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 735997422  383 PTTPKEPAPTAPKKPAPTTPKEP--APTTPKEPAPTT 417
Cdd:PRK12323  537 AFETLAPAPAAAPAPRAAAATEPvvAPRPPRASASGL 573

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

612-708

2.26e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 49.12 E-value: 2.26e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  612 APTTPKGTAPTTLKEPAPTTPKKPapkelaptttkeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPT 691
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAA--------------------PAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPA 97

                          90
                  ....*....|....*..
gi 735997422  692 TLKEPAPTTPKKPAPKE 708
Cdd:PRK12270   98 APPAAAAAAAPAAAAVE 114

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

578-707

2.56e-05

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 47.84 E-value: 2.56e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  578 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 657
Cdd:NF040712  200 ATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGE 279

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 735997422  658 PTTPKGTAPTTPKEPAPTTPKEPA-PTTPKGTAPTTLKEPAPTTPKKPAPK 707
Cdd:NF040712  280 PPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPPAPKPKRRRRR 330

PRK07764

DNA polymerase III subunits gamma and tau; Validated

218-429

2.79e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 2.79e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  218 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTtikSAPTTPKEPAPTTTKSAP 297
Cdd:PRK07764  572 TALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPA---GAAAAPAEASAAPAPGVA 648

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  298 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 377
Cdd:PRK07764  649 APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA 728

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 735997422  378 TKEPAPTTPKEPAPTAPKKP--APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 429
Cdd:PRK07764  729 SAPSPAADDPVPLPPEPDDPpdPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

279-351

2.88e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.73 E-value: 2.88e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  279 KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPA 351
Cdd:PRK12270   52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

655-750

3.27e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.35 E-value: 3.27e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  655 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkgptsttsdKPAPTTPKETA 734
Cdd:PRK12270   45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPA----------------APPAAAAAAAP 108

                          90
                  ....*....|....*.
gi 735997422  735 PTTPKEPAPTTPKKPA 750
Cdd:PRK12270  109 AAAAVEDEVTPLRGAA 124

rne

PRK10811

ribonuclease E; Reviewed

380-553

3.31e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 48.50 E-value: 3.31e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  380 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Cdd:PRK10811  859 REAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDV 936

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  460 S--PTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPaPTTPKETAPTTPKKLTPTTPE 537
Cdd:PRK10811  937 AvaQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETV-TAVEPEVAPAQVPEATVEHNH 1015

                         170
                  ....*....|....*..
gi 735997422  538 KLAPTTpEKPAPT-TPE 553
Cdd:PRK10811 1016 ATAPMT-RAPAPEyVPE 1031

rne

PRK10811

ribonuclease E; Reviewed

447-636

3.93e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 48.11 E-value: 3.93e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  447 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTpkEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPT 526
Cdd:PRK10811  848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVT 925

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  527 TPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPaptTPKEPAPT 606
Cdd:PRK10811  926 EQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETV---TAVEPEVA 1002

                         170       180       190
                  ....*....|....*....|....*....|..
gi 735997422  607 TPKETAPTTPKG--TAPTTlKEPAPTTPKKPA 636
Cdd:PRK10811 1003 PAQVPEATVEHNhaTAPMT-RAPAPEYVPEAP 1033

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1058-1100

5.57e-05

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 41.84 E-value: 5.57e-05

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 735997422   1058 VDGLTTLRNGTLVAFRGHYFWMLSPFSP-PSPARRITEVW-GIPS 1100
Cdd:smart00120    1 IDAAFELRDGKTYFFKGDKYWRFDPKRVdPGYPKLISSFFpGLPC 45

PRK14948

DNA polymerase III subunit gamma/tau;

280-357

5.59e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.65 E-value: 5.59e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 357
Cdd:PRK14948  516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593

COG5373

Uncharacterized membrane protein [Function unknown];

295-357

5.69e-05

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 47.69 E-value: 5.69e-05

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  295 SAPTTPKEPAPtttkePAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 357
Cdd:COG5373    42 EAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAA 99

PRK12323

DNA polymerase III subunit gamma/tau;

380-552

5.90e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.56 E-value: 5.90e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  380 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSpttPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Cdd:PRK12323  393 AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAA---ARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP 469

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  460 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPaptTPKETAPTTPKKLTPTTPEKL 539
Cdd:PRK12323  470 RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAES---IPDPATADPDDAFETLAPAPA 546

                         170
                  ....*....|...
gi 735997422  540 APTTPEKPAPTTP 552
Cdd:PRK12323  547 AAPAPRAAAATEP 559

rne

PRK10811

ribonuclease E; Reviewed

407-596

6.41e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 47.73 E-value: 6.41e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  407 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPspTTTKEPAPTTPKEPAPTTPKKPAPT 486
Cdd:PRK10811  846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEP--VVVAEPQPEEVVVVETTHPEVIAAP 923

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  487 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAP-TTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTP 565
Cdd:PRK10811  924 VTEQPQVITESDVAVAQEVAEHAEPVVEPQDeTADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAP 1003

                         170       180       190
                  ....*....|....*....|....*....|.
gi 735997422  566 TTPEEPAPTTPKAAAPNTpKEPAPTTPKEPA 596
Cdd:PRK10811 1004 AQVPEATVEHNHATAPMT-RAPAPEYVPEAP 1033

PHA03247

large tegument protein UL36; Provisional

162-469

6.86e-05

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 6.86e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  162 AKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPK 241
Cdd:PHA03247 2734 ALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA 2813

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  242 AETTTKGPALTTPKEPTPTTPKEPASttpkeptpttiksaPTTPKEPAPTTTKSAPTTPKepAPTTTKEPAPTTPKEPAp 321
Cdd:PHA03247 2814 PAAALPPAASPAGPLPPPTSAQPTAP--------------PPPPGPPPPSLPLGGSVAPG--GDVRRRPPSRSPAAKPA- 2876

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  322 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTT 401
Cdd:PHA03247 2877 APARPPVRRLARPAVSRSTESFALPPDQPERPPQ-------------------------PQAPPPPQPQPQPPPPPQPQP 2931

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997422  402 PKEPAPTTPKEPAPTTTKEPSP-TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT--TPKEPSPTTTKEPAP 469
Cdd:PHA03247 2932 PPPPPPRPQPPLAPTTDPAGAGePSGAVPQPWLGALVPGRVAVPRFRVPQPAPSreAPASSTPPLTGHSLS 3002

PRK07994

DNA polymerase III subunits gamma and tau; Validated

546-710

7.16e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 47.17 E-value: 7.16e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  546 KPAPTTPEelAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTP----KGTAP 621
Cdd:PRK07994  360 HPAAPLPE--PEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqraQGATK 437

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  622 TTLKEPAPTTPKKPAPKELAptttKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTP 701
Cdd:PRK07994  438 AKKSEPAAASRARPVNSALE----RLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELA 513


                  ....*....
gi 735997422  702 KKPAPKELA 710
Cdd:PRK07994  514 AKLAAEAIE 522

PRK12323

DNA polymerase III subunit gamma/tau;

248-458

7.30e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.18 E-value: 7.30e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  248 GPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP 327
Cdd:PRK12323  373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAP 452

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  328 APTttkSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP 407
Cdd:PRK12323  453 APA---AAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDP 529

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 735997422  408 TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 458
Cdd:PRK12323  530 ATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGD 580

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

283-347

7.38e-05

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 46.81 E-value: 7.38e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997422   283 TTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT-PKEPAPTTP 347
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATaPESPSTSVP 140

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

396-491

7.69e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 7.69e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  396 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEP 475
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAP-----------------AAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAP 99

                          90
                  ....*....|....*.
gi 735997422  476 APTTPKKPAPTTPKEP 491
Cdd:PRK12270  100 PAAAAAAAPAAAAVED 115

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

450-524

8.37e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 8.37e-05

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997422  450 KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETA 524
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAA 111

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

282-490

9.99e-05

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 46.99 E-value: 9.99e-05

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  282 PTTPKEPAPTTTKSAPTTPKEPA-PTTTKepAPTTPKEP-APTTTKEPAPTTTKSAPTTPKEP-APTTPKKPapttpkep 358
Cdd:PTZ00449  591 PEEPKKPKRPRSAQRPTRPKSPKlPELLD--IPKSPKRPeSPKSPKRPPPPQRPSSPERPEGPkIIKSPKPP-------- 660

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  359 apTTPKEP-----------------TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPApTTPKEPAPTTPKEPAPTTTKEP 421
Cdd:PTZ00449  661 --KSPKPPfdpkfkekfyddyldaaAKSKETKTTVVLDESFESILKETLPETPGTPF-TTPRPLPPKLPRDEEFPFEPIG 737

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997422  422 SPTTPK--------EPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA--PTTPKE 490
Cdd:PTZ00449  738 DPDAEQpddiefftPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDSPSEHEDKPPGdhPSLPKK 816

PHA03369

capsid maturational protease; Provisional

405-699

1.04e-04

capsid maturational protease; Provisional

Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 46.53 E-value: 1.04e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  405 PAPTTPKEPAPTTTKEPSPTTPKEPAPtttksaptttkEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP- 483
Cdd:PHA03369  354 TAPSRVLAAAAKVAVIAAPQTHTGPAD-----------RQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPq 422

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  484 APTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE------KLAPTTPEKPAPTTPEELAP 557
Cdd:PHA03369  423 SPGTSYGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEelietlKLVKKLKEEQESLAKELEAT 502

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  558 TTPEEPTPTTPEEPAPTTPKAAAPNTpkEPAPTTPkEPAPTTpKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKP-- 635
Cdd:PHA03369  503 AHKSEIKKIAESEFKNAGAKTAAANI--EPNCSAD-AAAPAT-KRARPETKTELEAVVRFPYQIRNMESPAFVHSFTStt 578

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997422  636 ----------APKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPT-TPKEPAPTTPKGTAPTTLKEPAPT 699
Cdd:PHA03369  579 laaaagqgsdTAEALAGAIETLLTQASAQPAGLSLPAPAVPVNASTPASTpPPLAPQEPPQPGTSAPSLETSLPQ 653

PRK07994

DNA polymerase III subunits gamma and tau; Validated

311-485

1.07e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.78 E-value: 1.07e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  311 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPA 390
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPAS--------------------APQQAPAVPLPETTS 420

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  391 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPT-----TPKEPAPTTtkSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
Cdd:PRK07994  421 QLLAARQQLQRAQGATKAKKSEPAAASRARPVNSalerlASVRPAPSA--LEKAPAKKEAYRWKATNPVEVKKEPVATPK 498

                         170       180
                  ....*....|....*....|
gi 735997422  466 EPAPTTPKEPAPTTPKKPAP 485
Cdd:PRK07994  499 ALKKALEHEKTPELAAKLAA 518

rne

PRK10811

ribonuclease E; Reviewed

281-468

1.09e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.96 E-value: 1.09e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  281 APTTPKEPAPTTTKSAPTTpkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTpKEPAPTTPkkpapttpkepap 360
Cdd:PRK10811  870 VAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVT-EQPQVITE------------- 933

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  361 ttpkeptpTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA-PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 439
Cdd:PRK10811  934 --------SDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAePEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQ 1005

                         170       180
                  ....*....|....*....|....*....
gi 735997422  440 TTKEPAPTTTKSAPTTpKEPSPTTTKEPA 468
Cdd:PRK10811 1006 VPEATVEHNHATAPMT-RAPAPEYVPEAP 1033

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

299-395

1.12e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.81 E-value: 1.12e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  299 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepaPTT 378
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------------------AAP 99

                          90
                  ....*....|....*..
gi 735997422  379 KEPAPTTPKEPAPTAPK 395
Cdd:PRK12270  100 PAAAAAAAPAAAAVEDE 116

PRK07994

DNA polymerase III subunits gamma and tau; Validated

396-555

1.16e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.16e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  396 KPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK--EPSPTTTKEPAPTTPK 473
Cdd:PRK07994  360 HPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQllAARQQLQRAQGATKAK 439

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  474 EPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 553
Cdd:PRK07994  440 KSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAAE 519


                  ..
gi 735997422  554 EL 555
Cdd:PRK07994  520 AI 521

PHA03307

transcriptional regulator ICP4; Provisional

451-819

1.17e-04

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.70 E-value: 1.17e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  451 SAPTTPKEPSPTTTKEPAPTTPKEPAPTT------PKKPAPTT--PKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 522
Cdd:PHA03307   23 RPPATPGDAADDLLSGSQGQLVSDSAELAavtvvaGAAACDRFepPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAR 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  523 TAPTTPKKLTPTTPEKlAPTTPEKPAPTTPEELapTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 602
Cdd:PHA03307  103 EGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDL--SEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSP 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  603 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPApkelaptttkeptSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 682
Cdd:PHA03307  180 EETARAPSSPPAEPPPSTPPAAASPRPPRRSSPI-------------SASASSPAPAPGRSAADDAGASSSDSSSSESSG 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  683 TTPKGTAPTTLKEPAP-TTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTT 761
Cdd:PHA03307  247 CGWGPENECPLPRPAPiTLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSS 326

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  762 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPK--EPGVPTTKTPAATKPEMT 819
Cdd:PHA03307  327 SSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRkrPRPSRAPSSPAASAGRPT 386

PRK10263

DNA translocase FtsK; Provisional

391-636

1.19e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.62 E-value: 1.19e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  391 PTAPKKPAPTTPKEPAPTT--------PKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 462
Cdd:PRK10263  339 PVTQTPPVASVDVPPAQPTvawqpvpgPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQ 418

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  463 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLA-P 541
Cdd:PRK10263  419 PYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVeE 498

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  542 TTPEKPAPTTPEELAPTTPEEPTPTTPEEPApttpkaaAPNTPKEPAPTTPKEPAPTTPKEPaPTTPKETAPTTPKGTAP 621
Cdd:PRK10263  499 TKPARPPLYYFEEVEEKRAREREQLAAWYQP-------IPEPVKEPEPIKSSLKAPSVAAVP-PVEAAAAVSPLASGVKK 570

                         250
                  ....*....|....*
gi 735997422  622 TTLKEPAPTTPKKPA 636
Cdd:PRK10263  571 ATLATGAAATVAAPV 585

PRK07994

DNA polymerase III subunits gamma and tau; Validated

467-641

1.24e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.40 E-value: 1.24e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  467 PAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 546
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  547 PAPTTPEElapttpeePTPTTPEEPAPTTPKAAAPNTPKEPApttPKEPAPTTPKEPAPTtpKETAPTTPKGTAPTTLKE 626
Cdd:PRK07994  441 SEPAAASR--------ARPVNSALERLASVRPAPSALEKAPA---KKEAYRWKATNPVEV--KKEPVATPKALKKALEHE 507

                         170
                  ....*....|....*
gi 735997422  627 PAPTTPKKPAPKELA 641
Cdd:PRK07994  508 KTPELAAKLAAEAIE 522

PHA03378

EBNA-3B; Provisional

308-709

1.26e-04

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 46.60 E-value: 1.26e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  308 TKEPAPTtPKEPAPTTTKEPAPTTTKSAPTTP-KEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 386
Cdd:PHA03378  438 TEQPRAT-PHSQAPTVVLHRPPTQPLEGPTGPlSVQAPLEPWQPLPHPQVTPVILHQPPAQGVQAHGSMLDLLEKDDEDM 516

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  387 KEPAPTAPKKPAPTTPK--EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPkepSPTTT 464
Cdd:PHA03378  517 EQRVMATLLPPSPPQPRagRRAPCVYTEDLDIESDEPASTEPVHDQLLPAPGLGPLQIQPLTSPTTSQLASS---APSYA 593

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  465 KEPAPTtpkePAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPketapttpkkltpttPEKLAPTTP 544
Cdd:PHA03378  594 QTPWPV----PHPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNV---------------LVFPTPHQP 654

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  545 EKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTL 624
Cdd:PHA03378  655 PQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRA 734

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  625 KEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKE----PAPTTPKGTAPTT--LKEPAP 698
Cdd:PHA03378  735 RPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRprgaPTPQPPPQAGPTSmqLMPRAA 814

                         410
                  ....*....|.
gi 735997422  699 TTPKKPAPKEL 709
Cdd:PHA03378  815 PGQQGPTKQIL 825

PRK07003

DNA polymerase III subunit gamma/tau;

229-485

1.37e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 46.38 E-value: 1.37e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  229 APTSKVLAKPTPKAETttkgPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPA-PTT 307
Cdd:PRK07003  401 AVTGAAGAALAPKAAA----AAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPAdSGS 476

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  308 TKEPAPTTPkepaPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTtpkepapttpkeptpttpkepaptTKEPAPttPK 387
Cdd:PRK07003  477 ASAPASDAP----PDAAFEPAPRAAAPSAATPAAVPDARAPAAASR------------------------EDAPAA--AA 526

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  388 EPAPTAPkKPAPTTPKEPAPTTPKEPA-----PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 462
Cdd:PRK07003  527 PPAPEAR-PPTPAAAAPAARAGGAAAAldvlrNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTPRARAAT 605

                         250       260
                  ....*....|....*....|...
gi 735997422  463 TTKEPAPTTPKEPAPTTPKKPAP 485
Cdd:PRK07003  606 GDAPPNGAARAEQAAESRGAPPP 628

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

334-461

1.39e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 1.39e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  334 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 413
Cdd:PRK14951  368 AAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVAL 447

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 735997422  414 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 461
Cdd:PRK14951  448 APAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

379-496

1.53e-04

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 43.12 E-value: 1.53e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   379 KEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPaptttksaptttkepaptttksAPTTPKE 458
Cdd:pfam02389   28 KVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCYPKVP----------------------EPCSPKV 85

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 735997422   459 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Cdd:pfam02389   86 PEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPS 123

PHA03307

transcriptional regulator ICP4; Provisional

382-779

1.66e-04

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.32 E-value: 1.66e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  382 APTTPKEPAPTAPKKPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT-KSAPTTPKEPS 460
Cdd:PHA03307   24 PPATPGDAADDLLSGSQGQLVSDSAELA--AVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTwSLSTLAPASPA 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  461 PTTTKEPAPTTPKEPAPTTPKKPAPttPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKkltpttpekla 540
Cdd:PHA03307  102 REGSPTPPGPSSPDPPPPTPPPASP--PPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAS----------- 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  541 PTTPEKPAPTTPEElapttpeeptpttpeepapttpkAAAPNTPKEPAPTTPkEPAPTTPKEPAPTTPKETAPTTPKGTA 620
Cdd:PHA03307  169 SRQAALPLSSPEET-----------------------ARAPSSPPAEPPPST-PPAAASPRPPRRSSPISASASSPAPAP 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  621 PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPttpkGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPtT 700
Cdd:PHA03307  225 GRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAP----ITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSP-S 299

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  701 PKKPAPKELAPTTTK-----GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTT 775
Cdd:PHA03307  300 PSSPGSGPAPSSPRAsssssSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPA 379


                  ....
gi 735997422  776 IHKS 779
Cdd:PHA03307  380 ASAG 383

PRK14948

DNA polymerase III subunit gamma/tau;

316-483

1.75e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.72 E-value: 1.75e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  316 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptPTTPKEPAPTTKEPAPTTPKEPAPTAPK 395
Cdd:PRK14948  363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT------------TPSPPPAKASPPIPVPAEPTEPSPTPPA 430

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  396 KPAPTTPKE----------------------------------------------------------------------- 404
Cdd:PRK14948  431 NAANAPPSLnleelwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnl 510

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  405 -----PAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 479
Cdd:PRK14948  511 esqsgSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTK 590


                  ....
gi 735997422  480 PKKP 483
Cdd:PRK14948  591 DSSP 594

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

657-750

1.88e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.57 E-value: 1.88e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  657 APTTPKGTAPTTPKEPAPTTPKePAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkGPTSTTSDKPAPTTPKETAPT 736
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATP---------PPVPPRPVAPPVPHTPESAPK 430

                          90
                  ....*....|....*.
gi 735997422  737 TPKE--PAPTTPKKPA 750
Cdd:PRK14950  431 LTRAaiPVDEKPKYTP 446

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

390-496

1.95e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.86 E-value: 1.95e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  390 APTAPKKPAPTTPKEPAPTTP-KEPAPTTTKEPSPTTPkEPAPTTTKSAPTTTKEPAPTTtkSAPTTPKEPSPTTTKEPA 468
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPAAA-PAAAASAPAAPPAAAPPAPVA--APAAAAPAAAPAAAPAAV 445

                          90       100
                  ....*....|....*....|....*...
gi 735997422  469 PTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Cdd:PRK14951  446 ALAPAPPAQAAPETVAIPVRVAPEPAVA 473

PRK14948

DNA polymerase III subunit gamma/tau;

280-459

2.10e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.72 E-value: 2.10e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPkEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT----- 354
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAAT-TPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnleel 444

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  355 --------------------------------------------PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPA 390
Cdd:PRK14948  445 wqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqSRKPLLEQAFAKVLGRSIKLNLESQSGSASNTAKTP 524

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997422  391 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Cdd:PRK14948  525 PPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSS 593

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

672-765

2.35e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.65 E-value: 2.35e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  672 PAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAptttkgptsttsdKPAPTTPKETAPTTPKEPAPTTPKKPAP 751
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPA-------------AAAPAAPPKPAAAAAAAAAPAAPPAAAA 104

                          90
                  ....*....|....
gi 735997422  752 TTPETPPPTTSEVS 765
Cdd:PRK12270  105 AAAPAAAAVEDEVT 118

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

584-749

2.45e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 45.30 E-value: 2.45e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  584 PKEPAPTTPKEPAPTTPKEP-APTTPKETAPTTPKGTA--------------PTTLKEPAPTTPKKPAPKEL-------- 640
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPeAPSPPIEEEPPQPKAVVprplspytayedlkPPTSPIPTPPSSSPASSKSVdavakpae 409

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  641 --APTTTKEPTSTTSDKPAPTTPKGTAPTTP--KEPAPTTPKEPAPTTPKGTAPTTLKEPA-PTTPKKPAPKELAPTTTK 715
Cdd:PLN03209  410 pdVVPSPGSASNVPEVEPAQVEAKKTRPLSPyaRYEDLKPPTSPSPTAPTGVSPSVSSTSSvPAVPDTAPATAATDAAAP 489

                         170       180       190
                  ....*....|....*....|....*....|....
gi 735997422  716 GPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKP 749
Cdd:PLN03209  490 PPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAP 523

PRK12323

DNA polymerase III subunit gamma/tau;

520-746

2.57e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 2.57e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  520 PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTT 599
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  600 PKEPAPTTPKETAPTTPkgtapttlkePAPTTPKKPAPKELAPTTtkeptsttsdKPAPTTPKgtapttPKEPAPTTPKE 679
Cdd:PRK12323  455 AAAPAAAARPAAAGPRP----------VAAAAAAAPARAAPAAAP----------APADDDPP------PWEELPPEFAS 508

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997422  680 PAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKEtAPTTPKEPAPTTP 746
Cdd:PRK12323  509 PAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVV-APRPPRASASGLP 574

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

620-740

2.58e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.19 E-value: 2.58e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  620 APTTLKEPAPTTPKKPAPKelaptttkeptsttSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKgtapttlkePAPT 699
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPV--------------RPTPAPSTRPKAAAAANIPPKEPVRETATPPPVP---------PRPV 417

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 735997422  700 TPKKPAPKELAPTTTKGPTsttsdkPAPTTPKETAPTTPKE 740
Cdd:PRK14950  418 APPVPHTPESAPKLTRAAI------PVDEKPKYTPPAPPKE 452

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

389-490

2.64e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 45.23 E-value: 2.64e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  389 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKsapttPKEPSPTTTKEPA 468
Cdd:COG3266   265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAEAAAPQPTAAK-----PVVTETAAPAAPA 339

                          90       100
                  ....*....|....*....|...
gi 735997422  469 P-TTPKEPAPTTPKKPAPTTPKE 490
Cdd:COG3266   340 PeAAAAAAAPAAPAVAKKLAADE 362

PRK07003

DNA polymerase III subunit gamma/tau;

474-735

2.83e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.83e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  474 EPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 553
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  554 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP----KEPAPT---TPKETAPTTPKGTAPTTLKE 626
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPpdaaFEPAPRaaaPSAATPAAVPDARAPAAASR 518

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  627 P-APTTPKKPAPKELAPTTTKEPTSTTSDKPAP------------TTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTtl 693
Cdd:PRK07003  519 EdAPAAAAPPAPEARPPTPAAAAPAARAGGAAAaldvlrnagmrvSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQV-- 596

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 735997422  694 kepapTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAP 735
Cdd:PRK07003  597 -----PTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDIP 633

PRK14948

DNA polymerase III subunit gamma/tau;

295-467

2.83e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.34 E-value: 2.83e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  295 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 374
Cdd:PRK14948  366 SEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPP-----PAKASPPIPVPAEPTEPSPTPPANAANAPPSLN 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  375 APT------TKEPAPTT-------------------------------------------------------PKEPAPTA 393
Cdd:PRK14948  441 LEElwqqilAKLELPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesQSGSASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997422  394 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP 467
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

PRK07994

DNA polymerase III subunits gamma and tau; Validated

595-800

2.92e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 2.92e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  595 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAP 674
Cdd:PRK07994  366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAA 445

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  675 TTPKEPAPTTPKGTAPttlKEPAPTTPKKPAPKELAPTTtkgptsttsDKPAPTTPKETAPTTPKEPapttpkKPAPTTp 754
Cdd:PRK07994  446 ASRARPVNSALERLAS---VRPAPSALEKAPAKKEAYRW---------KATNPVEVKKEPVATPKAL------KKALEH- 506

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 735997422  755 etpppttsevstptttkepttihkspdESTPELSAEPTPKALENSP 800
Cdd:PRK07994  507 ---------------------------EKTPELAAKLAAEAIERDP 525

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

322-430

3.01e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 45.19 E-value: 3.01e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  322 TTTKEPAPTTtksAPTTPKEPAPTTPkKPAPTTPkepapttpkeptpttpkepaPTTKEPAPTTPKEPAP-TAPKKPAPT 400
Cdd:PRK14950  359 LLVPVPAPQP---AKPTAAAPSPVRP-TPAPSTR--------------------PKAAAAANIPPKEPVReTATPPPVPP 414

                          90       100       110
                  ....*....|....*....|....*....|..
gi 735997422  401 TPKEPAPTTPKEPAPTTTKE--PSPTTPKEPA 430
Cdd:PRK14950  415 RPVAPPVPHTPESAPKLTRAaiPVDEKPKYTP 446

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

289-706

3.02e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 45.29 E-value: 3.02e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   289 APTTTKSAPTTPKepAPTTTKEPAPTTPK-EPAPTTTKEPAPTTTKSAPTTPkEPAP----TTPKKPAPTTPKEPAPTTP 363
Cdd:pfam05109  441 APNTTTGLPSSTH--VPTNLTAPASTGPTvSTADVTSPTPAGTTSGASPVTP-SPSPrdngTESKAPDMTSPTSAVTTPT 517

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   364 KEPTPTTpkepapttkePAPTTPKEPA--PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPkepaptttksaptTT 441
Cdd:pfam05109  518 PNATSPT----------PAVTTPTPNAtsPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIP-------------TL 574

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   442 KEPAPTTTKSAPtTPKEPSPTTTK-EPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTp 520
Cdd:pfam05109  575 GKTSPTSAVTTP-TPNATSPTVGEtSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLRPSSIS- 652

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   521 ketapttpkkltpttpEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP 600
Cdd:pfam05109  653 ----------------ETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSS 716

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   601 KEPAPTTPKETAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTT 676
Cdd:pfam05109  717 TSTKPGEVNVTKGTPPKNAtspqAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNAT 796

                          410       420       430
                   ....*....|....*....|....*....|
gi 735997422   677 PKEPAPTTPKGTAPTTLKEPAPTTPKKPAP 706
Cdd:pfam05109  797 TYLPPSTSSKLRPRWTFTSPPVTTAQATVP 826

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

380-496

3.18e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.37 E-value: 3.18e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  380 EPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkePAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT-PKE 458
Cdd:NF040712  208 EPADARPEEVEPAPAAEGAPATDSDPAEAGT--PDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPaPGA 285

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 735997422  459 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Cdd:NF040712  286 AETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPK 323

PHA03307

transcriptional regulator ICP4; Provisional

227-480

3.23e-04

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 3.23e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  227 DLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPT 306
Cdd:PHA03307   69 TGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPP 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  307 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepAPTTPKEPTPTTPKEPAPTTKEPAPTTP 386
Cdd:PHA03307  149 AASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPST---PPAAASPRPPRRSSPISASASSPAPAPG 225

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  387 KEPAPTAPKKPAPTTPKEPAPTTPKEpaptTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPtttkE 466
Cdd:PHA03307  226 RSAADDAGASSSDSSSSESSGCGWGP----ENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSP----S 297

                         250
                  ....*....|....
gi 735997422  467 PAPTTPKEPAPTTP 480
Cdd:PHA03307  298 PSPSSPGSGPAPSS 311

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

546-641

3.73e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.88 E-value: 3.73e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  546 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlk 625
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV--- 113

                          90
                  ....*....|....*.
gi 735997422  626 ePAPTTPKKPAPKELA 641
Cdd:PRK12270  114 -EDEVTPLRGAAAAVA 128

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

309-429

4.07e-04

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 41.96 E-value: 4.07e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   309 KEPAPTTPKEPAPTTTKEPAPTTTKSaPTTPKEPAPTTPKKPAPTTPKepapttpKEPTPTTPKEPAPTTKEPAPTTPKE 388
Cdd:pfam02389    6 KQPCQPPPQEPCVPTTKEPCHSKVPE-PCNPKVPEPCCPKVPEPCCPK-------VPEPCCPKVPEPCCPKVPEPCYPKV 77

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 735997422   389 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP 429
Cdd:pfam02389   78 PEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVP 118

DUF4045

pfam13254

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...

334-497

4.23e-04

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.

Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 44.39 E-value: 4.23e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   334 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 413
Cdd:pfam13254  195 GRPNSFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEP 274

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   414 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPttpkEPAPTTPKKP--APTTPKEP 491
Cdd:pfam13254  275 AAPSKSAEASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSP----KPKPQSPPKDfrANLRSREV 350


                   ....*.
gi 735997422   492 APTTPK 497
Cdd:pfam13254  351 PKDKSK 356

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

381-474

4.27e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.42 E-value: 4.27e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKePAPTAPKKPAPTTPKEPAPTTPkEPAPTTTKEPSPTTPkepaptttksaptttkePAPTTTKSAPTTPKE-- 458
Cdd:PRK14950  376 PSPVRPT-PAPSTRPKAAAAANIPPKEPVR-ETATPPPVPPRPVAP-----------------PVPHTPESAPKLTRAai 436

                          90
                  ....*....|....*.
gi 735997422  459 PSPTTTKEPAPTTPKE 474
Cdd:PRK14950  437 PVDEKPKYTPPAPPKE 452

PRK12323

DNA polymerase III subunit gamma/tau;

213-410

4.78e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 4.78e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  213 SAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTT 292
Cdd:PRK12323  379 AAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAP 458

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  293 TKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkePAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPK 372
Cdd:PRK12323  459 AAAARPAAAGPRPVAAAAAAAPARAAPAAAPA--PADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDD 536

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 735997422  373 EPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP 410
Cdd:PRK12323  537 AFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574

PRK12323

DNA polymerase III subunit gamma/tau;

656-817

4.87e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 4.87e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  656 PAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTtPKKPAPKELAPTTTKGPTSTTSDK-PAPTTPKETA 734
Cdd:PRK12323  381 PVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPA-RRSPAPEALAAARQASARGPGGAPaPAPAPAAAPA 459

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  735 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEpttihksPDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 814
Cdd:PRK12323  460 AAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP-------PWEELPPEFASPAPAQPDAAPAGWVAESIPDPATA 532


                  ...
gi 735997422  815 KPE 817
Cdd:PRK12323  533 DPD 535

PRK10263

DNA translocase FtsK; Provisional

304-517

5.07e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 44.69 E-value: 5.07e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  304 APTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTtPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 383
Cdd:PRK10263  324 AAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQ 402

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  384 TTPKEPAPTAPKK-------PAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEP-APTTTKSAPTTTKEPAPTTTKSAPTT 455
Cdd:PRK10263  403 PQQPYYAPAAEQPaqqpyyaPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTfAPQSTYQTEQTYQQPAAQEPLYQQPQ 482

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  456 PKEPSPTttKEPAPTTpKEPAPTTPK----------------------KPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPK 513
Cdd:PRK10263  483 PVEQQPV--VEPEPVV-EETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAA 559


                  ....
gi 735997422  514 EPAP 517
Cdd:PRK10263  560 AVSP 563

PRK12323

DNA polymerase III subunit gamma/tau;

451-669

5.21e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.48 E-value: 5.21e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  451 SAPTTPKE-PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpAPTTPKEPAPTTPKETAPTTPK 529
Cdd:PRK12323  372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARA-----------VAAAPARRSPAPEALAAARQAS 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  530 KLTPTTPEKLAPTTPEKPAPTTPEelAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP--TTPKEPAPTTPKEPAPT- 606
Cdd:PRK12323  441 ARGPGGAPAPAPAPAAAPAAAARP--AAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweELPPEFASPAPAQPDAAp 518

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  607 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPtsttsdkPAPTTPKGTAPTTP 669
Cdd:PRK12323  519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV-------VAPRPPRASASGLP 574

rne

PRK10811

ribonuclease E; Reviewed

578-746

5.27e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 44.65 E-value: 5.27e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  578 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPkgTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 657
Cdd:PRK10811  851 QDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVE--AVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQP 928

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  658 PTTPKGTAPTtpkepAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTtsdkPAPTTPKETAPTT 737
Cdd:PRK10811  929 QVITESDVAV-----AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAE----VAAEVETVTAVEP 999


                  ....*....
gi 735997422  738 PKEPAPTTP 746
Cdd:PRK10811 1000 EVAPAQVPE 1008

rne

PRK10811

ribonuclease E; Reviewed

578-750

5.27e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 44.65 E-value: 5.27e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  578 AAAPNTPKEPAPTTpkEPAPTTPKEPAPTT-PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPtttkeptsttsdkp 656
Cdd:PRK10811  875 VAAAVEPVVSAPVV--EAVAEVVEEPVVVAePQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAV-------------- 938

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  657 APTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKE--TA 734
Cdd:PRK10811  939 AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNhaTA 1018

                         170
                  ....*....|....*.
gi 735997422  735 PTTpKEPAPTTPKKPA 750
Cdd:PRK10811 1019 PMT-RAPAPEYVPEAP 1033

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

266-339

5.46e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 5.46e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997422  266 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTP 339
Cdd:PRK12270   46 AAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

398-496

5.63e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.07 E-value: 5.63e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  398 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPkEPSPTTTKEPAPTTPKEPAP 477
Cdd:COG3266   254 ALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAA-APAEAAAPQPTAAKPVVTET 332

                          90       100
                  ....*....|....*....|
gi 735997422  478 TTPKKPAP-TTPKEPAPTTP 496
Cdd:COG3266   333 AAPAAPAPeAAAAAAAPAAP 352

PRK07003

DNA polymerase III subunit gamma/tau;

443-708

6.11e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 6.11e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  443 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA--------PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKE 514
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGasavpavtAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  515 PAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKE 594
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASR 518

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  595 P-APTTPKEPAPttpkETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPA 673
Cdd:PRK07003  519 EdAPAAAAPPAP----EARPPTPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAV 594

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 735997422  674 PT-TPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKE 708
Cdd:PRK07003  595 QVpTPRARAATGDAPPNGAARAEQAAESRGAPPPWE 630

COG5373

Uncharacterized membrane protein [Function unknown];

280-348

7.12e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 44.22 E-value: 7.12e-04

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 735997422  280 SAPTTPKEPAPtttkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTkEPAPTTTKSAPTTPKEPAPTTPK 348
Cdd:COG5373    42 EAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAPPAAAE-APAPAAAAPPAEAEPAAAPAAAS 105

PRK12323

DNA polymerase III subunit gamma/tau;

603-829

7.32e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 7.32e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  603 PAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPkelaptttkeptsttsdKPAPTTPKGTAPTTPKEPAPTTPKEPAP 682
Cdd:PRK12323  374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAA-----------------APAAAAAARAVAAAPARRSPAPEALAAA 436

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  683 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTttkgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTS 762
Cdd:PRK12323  437 RQASARGPGGAPAPAPAPAAAPAAAARPAA------------AGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPP 504

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  763 EVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEP-GVPTTKTPAATKPEMTTTAKDKTTER 829
Cdd:PRK12323  505 EFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPaAAPAPRAAAATEPVVAPRPPRASASG 572

PRK07994

DNA polymerase III subunits gamma and tau; Validated

443-605

7.45e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.70 E-value: 7.45e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  443 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKE 522
Cdd:PRK07994  363 APLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSE 442

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  523 TAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEElapttpeeptpttpeEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKE 602
Cdd:PRK07994  443 PAAASRARPVNSALERLASVRPAPSALEKAPA---------------KKEAYRWKATNPVEVKKEPVATPKALKKALEHE 507


                  ...
gi 735997422  603 PAP 605
Cdd:PRK07994  508 KTP 510

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

333-430

7.53e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 7.53e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  333 KSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 412
Cdd:PRK12270   37 GPGSTAAPTAAAAAAAAAASAPA-------------------------AAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAA 91

                          90
                  ....*....|....*...
gi 735997422  413 PAPTTTKEPSPTTPKEPA 430
Cdd:PRK12270   92 AAAAPAAPPAAAAAAAPA 109

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

452-554

7.83e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.64 E-value: 7.83e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  452 APTTPKEPSPTTTKEPAPTTPKePAPTTPKKPAPTTPKEPAP----TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPtt 527
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHTPESAPKLTRAAIP-- 437

                          90       100
                  ....*....|....*....|....*..
gi 735997422  528 pkkltpttpeklAPTTPEKPAPTTPEE 554
Cdd:PRK14950  438 ------------VDEKPKYTPPAPPKE 452

PRK14948

DNA polymerase III subunit gamma/tau;

278-350

8.07e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 43.80 E-value: 8.07e-04

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  278 IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKP 350
Cdd:PRK14948  522 KTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

284-426

8.08e-04

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.22 E-value: 8.08e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  284 TPKEPAPTTTKSAPTTPkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTT--PKEPAPTTPKKPAPTTPKEPAPT 361
Cdd:NF040712  191 DFGRPLRPLATVPRLAR-EPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997422  362 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 426
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVP 334

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

335-466

8.32e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.64 E-value: 8.32e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  335 APTTPKEPAPTTPKKPAPTTPKepapttpkeptpttpkepapttkePAPTTPKEPAPTAPkkpAPTTPKEPAPTTPKEPA 414
Cdd:PRK14950  361 VPVPAPQPAKPTAAAPSPVRPT------------------------PAPSTRPKAAAAAN---IPPKEPVRETATPPPVP 413

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 735997422  415 PTTTKEPSPTTPKEPaptttksaptttkEPAPTTTKSAPTTPKEPSPTTTKE 466
Cdd:PRK14950  414 PRPVAPPVPHTPESA-------------PKLTRAAIPVDEKPKYTPPAPPKE 452

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

393-520

9.23e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.55 E-value: 9.23e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  393 APKKPAPTTPKEPAPTTPKEPAPtttkEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 472
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPAA----APVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 735997422  473 KEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTP 520
Cdd:PRK14951  445 VALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492

PRK07764

DNA polymerase III subunits gamma and tau; Validated

578-692

9.84e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 9.84e-04

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  578 AAAPNTPKEPAPTTPKEPAPT---TPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSD 654
Cdd:PRK07764  387 VAGGAGAPAAAAPSAAAAAPAaapAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQP 466

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 735997422  655 KPAPTTPkgTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 692
Cdd:PRK07764  467 APAPAAA--PEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

285-415

1.00e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.81 E-value: 1.00e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   285 PKEPAPTTTKSaPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSA-PTTPKEPAPTTPKKPAPTTPkepapttp 363
Cdd:pfam02389   13 PQEPCVPTTKE-PCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPePCCPKVPEPCYPKVPEPCSP-------- 83

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 735997422   364 keptpttpkepapttKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAP 415
Cdd:pfam02389   84 ---------------KVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

382-449

1.09e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.96 E-value: 1.09e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422   382 APTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTT 449
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAA 147

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

279-407

1.16e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 43.16 E-value: 1.16e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  279 KSAPTTPKE----PAPTTTKSAPTTPKEPAPTTTkePAPTTPKEPAPtttkepaptttkSAPTTPKEPAPTTPKKPAPTT 354
Cdd:PRK14951  378 KKTPARPEAaapaAAPVAQAAAAPAPAAAPAAAA--SAPAAPPAAAP------------PAPVAAPAAAAPAAAPAAAPA 443

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 735997422  355 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkKPAPTTPKEPAP 407
Cdd:PRK14951  444 AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP-AAARLTPTEEGD 495

PRK14971

DNA polymerase III subunit gamma/tau;

578-686

1.21e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 43.23 E-value: 1.21e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  578 AAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTlkEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 657
Cdd:PRK14971  387 AAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPP--AAVPVNPPSTAPQAVRPAQFKEEKKIPVSKVS 464

                          90       100
                  ....*....|....*....|....*....
gi 735997422  658 PTTPKGTAPTTPKEPAPTTPKEPAPTTPK 686
Cdd:PRK14971  465 SLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

PRK07994

DNA polymerase III subunits gamma and tau; Validated

655-830

1.22e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 1.22e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  655 KPAPTTPKGTAPTTPKEPAPTtpkEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETA 734
Cdd:PRK07994  360 HPAAPLPEPEVPPQSAAPAAS---AQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGAT 436

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  735 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHkSPDESTPELSAEP---TPKALENSPKEPgvpttKTp 811
Cdd:PRK07994  437 KAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAY-RWKATNPVEVKKEpvaTPKALKKALEHE-----KT- 509

                         170
                  ....*....|....*....
gi 735997422  812 aatkPEMTTTAKDKTTERD 830
Cdd:PRK07994  510 ----PELAAKLAAEAIERD 524

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

290-426

1.27e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.45 E-value: 1.27e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  290 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPT 369
Cdd:NF040712  190 PDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAE 269

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 735997422  370 TPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTtpkEPAPTTPKEPAPTTTKEPSPTTP 426
Cdd:NF040712  270 PDEATRDAGEPPAPGAAETPEAAEPPAPAPA---APAAPAAPEAEEPARPEPPPAPK 323

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

581-706

1.32e-03

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 40.42 E-value: 1.32e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   581 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKElaptttkeptsttSDKPAPTT 660
Cdd:pfam02389    8 PCQPPPQEPCVPTTKEPCHSKVPEPCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCC-------------PKVPEPCY 74

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 735997422   661 PKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAP 706
Cdd:pfam02389   75 PKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEP 120

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

546-687

1.40e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.78 E-value: 1.40e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  546 KPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPT-TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTL 624
Cdd:PRK14951  365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAaASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  625 KEPAPTTPKKPAPKELAPtttkeptsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKG 687
Cdd:PRK14951  445 VALAPAPPAQAAPETVAI-------------PVRVAPEPAVASAAPAPAAAPAAARLTPTEEG 494

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

218-357

1.41e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.91 E-value: 1.41e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  218 QSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPAlTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAP 297
Cdd:COG3266   236 AAEVLTARLVLLLLIIGSALKAPSQASSASAPA-TTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAP 314

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  298 TTPKEPAPTTTKepapttPKEPAPTTTKEPAPTTTKSApttpkePAPTTPKKPAPTTPKE 357
Cdd:COG3266   315 AEAAAPQPTAAK------PVVTETAAPAAPAPEAAAAA------AAPAAPAVAKKLAADE 362

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

212-491

1.58e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 42.64 E-value: 1.58e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   212 TSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPA-----LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPK 286
Cdd:pfam17823   97 LSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAalpseAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPR 176

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   287 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTT----TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTT 362
Cdd:pfam17823  177 TAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHpaagTALAAVGNSSPAAGTVTAAVGTVTPAALATL 256

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   363 PKEPTPTTPKEPAPTTKEPAPTTPKE----PAPTAPKKPAPTTPKEPAPTTPK----EPAPTTTKEPSPTTPKEPAPTTT 434
Cdd:pfam17823  257 AAAAGTVASAAGTINMGDPHARRLSPakhmPSDTMARNPAAPMGAQAQGPIIQvstdQPVHNTAGEPTPSPSNTTLEPNT 336

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997422   435 KSAPTTTKEPAPTTTKSA---PTTPKEPSPTTTKEP-----APTTPKEPAPTTPKKPAPTTPKEP 491
Cdd:pfam17823  337 PKSVASTNLAVVTTTKAQakePSASPVPVLHTSMIPeveatSPTTQPSPLLPTQGAAGPGILLAP 401

TALPID3

pfam15324

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ...

395-626

1.72e-03

Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.

Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 42.95 E-value: 1.72e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   395 KKPAPTTPKEPAPTTPKE---PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 471
Cdd:pfam15324  964 QREPPVAASVPGDLPTKEtllPTPVPTPQPTPPCSPPSPLKEPSPVKTPDSSPCVSEHDFFPVKEIPPEKGADTGPAVSL 1043

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   472 PKEPAPTtpkkPAPTTPKEPAPTTPkepapTTTKKPAPTTPKEPAPTTPKETAPttpkkltpttpeklAPTTPEKPAPTT 551
Cdd:pfam15324 1044 VITPTVT----PIATPPPAATPTPP-----LSENSIDKLKSPSPELPKPWEDSD--------------LPLEEENPNSEQ 1100

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997422   552 PEelapttPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKepaPTTPKEPAPTTPKETAPTTPKGTAPTTLKE 626
Cdd:pfam15324 1101 EE------LHPRAVVMSVARDEEPESVVLPASPPEPKPLAPP---PLGAAPPSPPQSPSSSSSTLESSSSLTVTE 1166

rne

PRK10811

ribonuclease E; Reviewed

266-421

1.77e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.72 E-value: 1.77e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  266 ASTTPKEPTPTTIKSAPTTPKEPAPTTtksapttpkEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPT---TPKEP 342
Cdd:PRK10811  876 AAAVEPVVSAPVVEAVAEVVEEPVVVA---------EPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAVaqeVAEHA 946

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  343 APTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEP--------APTTpKEPA 414
Cdd:PRK10811  947 EPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEAtvehnhatAPMT-RAPA 1025


                  ....*..
gi 735997422  415 PTTTKEP 421
Cdd:PRK10811 1026 PEYVPEA 1032

rne

PRK10811

ribonuclease E; Reviewed

334-496

1.88e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.72 E-value: 1.88e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  334 SAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTkEPAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEP 413
Cdd:PRK10811  844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV-EAVAEVVEEPVVVAE--PQPEEVVVVETTHPEVI 920

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  414 APTTTKEPSPTTPKE-------PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPsPTTTKEPAPTTPKEPAPTTPKKPAPT 486
Cdd:PRK10811  921 AAPVTEQPQVITESDvavaqevAEHAEPVVEPQDETADIEEAAETAEVVVAEP-EVVAQPAAPVVAEVAAEVETVTAVEP 999

                         170
                  ....*....|
gi 735997422  487 TPKEPAPTTP 496
Cdd:PRK10811 1000 EVAPAQVPEA 1009

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

310-456

1.93e-03

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.27 E-value: 1.93e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  310 EPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAP----TTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 385
Cdd:PRK13108  294 EALEREPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKAEvaevTDEVAAESVVQVADRDGESTPAVEETSEADIER 373

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997422  386 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP 456
Cdd:PRK13108  374 EQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPGDDPAEP 444

PHA03378

EBNA-3B; Provisional

281-496

2.00e-03

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 42.75 E-value: 2.00e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  281 APTTPKEPAPTTTKSAPTTPKE-PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTksaPTTPKEPAPTTPKKPAPTTPKEPA 359
Cdd:PHA03378  650 TPHQPPQVEITPYKPTWTQIGHiPYQPSPTGANTMLPIQWAPGTMQPPPRAPT---PMRPPAAPPGRAQRPAAATGRARP 726

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  360 PTTPKEPTPTTPKEpapttkePAPTTPKEPAPTAPKKPAPT-TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAP 438
Cdd:PHA03378  727 PAAAPGRARPPAAA-------PGRARPPAAAPGRARPPAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPP 799

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  439 TTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTpKKPAPTTPKEPAPTTP 496
Cdd:PHA03378  800 PQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSL-KKPAALERQAAAGPTP 856

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

416-785

2.02e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.02e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  416 TTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPkepAPTTPKKPAPTTPKEPAPTT 495
Cdd:NF033839  119 STSKSQLQKLMMESQSKVDEAVSKFEKDSSSSSSSGSSTKPETPQPENPEHQKPTTP---APDTKPSPQPEGKKPSVPDI 195

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  496 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTT 575
Cdd:NF033839  196 NQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKF 275

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  576 PKAAAPNTPKEP------APTTPKEPAPTTPKEPAPTTPKETAP-TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 648
Cdd:NF033839  276 KKGLTQDTPKEPgnkkpsAPKPGMQPSPQPEKKEVKPEPETPKPeVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  649 TSTTSDKPApTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK-KPAPKELAPTTTKGPTSTTSD-KPA 726
Cdd:NF033839  356 PQPEKPKPE-VKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEvKPQPEKPKPEVKPQPEKPKPEvKPQ 434

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 735997422  727 PTTPK---ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTP 785
Cdd:NF033839  435 PEKPKpevKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKP 496

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

233-479

2.07e-03

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 2.07e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  233 KVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP-APTTTKEP 311
Cdd:NF033839  277 KGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLeTPKPEVKP 356

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  312 APTTPKEPAPTTTKEPAPTTtKSAPTTPK---EPAPTTPK---KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 385
Cdd:NF033839  357 QPEKPKPEVKPQPEKPKPEV-KPQPETPKpevKPQPEKPKpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  386 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
Cdd:NF033839  436 EKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTN 515

                         250
                  ....*....|....
gi 735997422  466 EPAPTTPKEPAPTT 479
Cdd:NF033839  516 EKATNKPKKSLPST 529

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

472-747

2.37e-03

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.22 E-value: 2.37e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  472 PKEPAPTTPKKPAPTTPKEPAPTTPKEPAptttkkpapttpkepapTTPKETAPTTPKKLTPTTPEKLAPttpekpaPTT 551
Cdd:PLN03209  330 PKESDAADGPKPVPTKPVTPEAPSPPIEE-----------------EPPQPKAVVPRPLSPYTAYEDLKP-------PTS 385

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  552 PeelapttpeepTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTP-KEPAPTTPKETAPTTPKgTAPTTLKEPAPT 630
Cdd:PLN03209  386 P-----------IPTPPSSSPASSKSVDAVAKPAEPDVVPSPGSASNVPeVEPAQVEAKKTRPLSPY-ARYEDLKPPTSP 453

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  631 TPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPK----EPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAP 706
Cdd:PLN03209  454 SPTAPTGVSPSVSSTSSVPAVPDTAPATAATDAAAPPPANmrplSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVG 533

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 735997422  707 KELAPTTTKGPTSTTSDKPAPTTP----KETAPttPKEPAPTTPK 747
Cdd:PLN03209  534 NSAPPTALADEQHHAQPKPRPLSPytmyEDLKP--PTSPTPSPVL 576

PRK13914

invasion associated endopeptidase;

278-472

2.45e-03

invasion associated endopeptidase;

Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 42.10 E-value: 2.45e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  278 IKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEpAPTTTKSAPT-TPKEPAPTTPKKPAPTTPK 356
Cdd:PRK13914  143 VTSTPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQATTPAPKVAETKE-TPVVDQNATThAVKSGDTIWALSVKYGVSV 221

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  357 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTP-----KEPAPTAPKKPAP----TTPKEPAPTTPKEPAP---TTTKEPSPT 424
Cdd:PRK13914  222 QDIMSWNNLSSSSIYVGQKLAIKQTANTATpkaevKTEAPAAEKQAAPvvkeNTNTNTATTEKKETTTqqqTAPKAPTEA 301

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 735997422  425 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 472
Cdd:PRK13914  302 AKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNS 349

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

289-355

2.58e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.24 E-value: 2.58e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  289 APTTTKSAPT---TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPtttkSAPTTPKEPAPTTPKKPAPTTP 355
Cdd:PRK14954  381 APSPAGSPDVkkkAPEPDLPQPDRHPGPAKPEAPGARPAELPSP----ASAPTPEQQPPVARSAPLPPSP 446

PHA03247

large tegument protein UL36; Provisional

284-495

2.81e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.23 E-value: 2.81e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  284 TPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTTKEPAPTTTKSAPTT-------------PKEPA 343
Cdd:PHA03247  268 APETARGATGPPPPPEAAAPNGAAAPPDgvwgaalAGAPLALPAPPDPPPPAPAGDAEEEDDedgamevvsplprPRQHY 347

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  344 PTT-PKKPAPT-TPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTpKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEP 421
Cdd:PHA03247  348 PLGfPKRRRPTwTPPSSLEDLSAGRHHPKRASLPTRKRRSARHA-ATPFARGPGGDDQTRPAAPVPASVPTPAPTPVPAS 426

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 735997422  422 SPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTT 495
Cdd:PHA03247  427 APPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLGRHPDT 500

rne

PRK10811

ribonuclease E; Reviewed

451-681

2.86e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.95 E-value: 2.86e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  451 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTpkepaptttkkpapttpkEPAPTTPKETAPTTPKk 530
Cdd:PRK10811  844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVV------------------EAVAEVVEEPVVVAEP- 904

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  531 ltpttpeklAPTTPEKPAPTTPEELAPttpeepTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKE 610
Cdd:PRK10811  905 ---------QPEEVVVVETTHPEVIAA------PVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVV 969

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997422  611 TAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPApttpkgTAPTTpKEPAPTTPKEPA 681
Cdd:PRK10811  970 VAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHA------TAPMT-RAPAPEYVPEAP 1033

PRK07003

DNA polymerase III subunit gamma/tau;

602-813

3.09e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.14 E-value: 3.09e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  602 EPAPTTPKETAPTTPkGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPttpkEPAPTTPKEPA 681
Cdd:PRK07003  359 EPAVTGGGAPGGGVP-ARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATR----AEAPPAAPAPP 433

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  682 PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKgptsttsDKPAPTTPKETAPTTPKEPAPttPKKPAPTTPETPPPTT 761
Cdd:PRK07003  434 ATADRGDDAADGDAPVPAKANARASADSRCDERD-------AQPPADSGSASAPASDAPPDA--AFEPAPRAAAPSAATP 504

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 735997422  762 SEVSTPTTTKEpttihkSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAA 813
Cdd:PRK07003  505 AAVPDARAPAA------ASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAA 550

PRK12323

DNA polymerase III subunit gamma/tau;

444-637

3.19e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 3.19e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  444 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 523
Cdd:PRK12323  374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA 453

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  524 APTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNtPKEPAPTTPKEPAPTTPKEP 603
Cdd:PRK12323  454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPA-QPDAAPAGWVAESIPDPATA 532

                         170       180       190
                  ....*....|....*....|....*....|....
gi 735997422  604 APTTPKETAPTtpkgtAPTTLKEPAPTTPKKPAP 637
Cdd:PRK12323  533 DPDDAFETLAP-----APAAAPAPRAAAATEPVV 561

PRK12757

cell division protein FtsN; Provisional

425-492

3.49e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.80 E-value: 3.49e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  425 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTP--KEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 492
Cdd:PRK12757  111 TPQVPRSTVQIQQQAQQQQPPATTAQPQPVTPprQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

540-628

4.01e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 4.01e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  540 APTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKgt 619
Cdd:PRK12270   39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE-- 116


                  ....*....
gi 735997422  620 aPTTLKEPA 628
Cdd:PRK12270  117 -VTPLRGAA 124

PHA03247

large tegument protein UL36; Provisional

303-492

4.17e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 4.17e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  303 PAPTTTKEPAPTTPKEPAPTTTKePAPTTTKSAPTTPKEPAP---------TTPKKPAPTTPKEPAPTTPKEPTPTTPKE 373
Cdd:PHA03247  255 PAPPPVVGEGADRAPETARGATG-PPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEEEDDEDGA 333

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  374 PAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTT------PKEPAPTTTKEPSP--TTPKEPAPTTTKSAPTTTKEPA 445
Cdd:PHA03247  334 MEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSagrhhpKRASLPTRKRRSARhaATPFARGPGGDDQTRPAAPVPA 413

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 735997422  446 PTTTKSAPTTPK-EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPA 492
Cdd:PHA03247  414 SVPTPAPTPVPAsAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEP 461

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

444-516

4.28e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.33 E-value: 4.28e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997422  444 PAPTTTKSAPTTPKEPSPTTTKEPAP----TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPA 516
Cdd:PRK14950  376 PSPVRPTPAPSTRPKAAAAANIPPKEpvreTATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAPPKE 452

PHA03247

large tegument protein UL36; Provisional

541-750

4.50e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 4.50e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  541 PTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAP---------TTPKEPAPTTPKEPAPTTPKET 611
Cdd:PHA03247  247 PLRGDIAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDgvwgaalagAPLALPAPPDPPPPAPAGDAEE 326

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  612 ApTTPKGTAPTTLKEPAPTT------PKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTP 685
Cdd:PHA03247  327 E-DDEDGAMEVVSPLPRPRQhyplgfPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQT 405

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997422  686 KGTAPTTLKEPAPTTPKKPAPKELAPTTTKgptsttsdkPAPTTPKETAPTTPKEPAPTTPKKPA 750
Cdd:PHA03247  406 RPAAPVPASVPTPAPTPVPASAPPPPATPL---------PSAEPGSDDGPAPPPERQPPAPATEP 461

PRK14971

DNA polymerase III subunit gamma/tau;

614-739

4.65e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 41.30 E-value: 4.65e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  614 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTL 693
Cdd:PRK14971  368 DASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAV 447

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 735997422  694 KEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 739
Cdd:PRK14971  448 RPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

381-477

4.68e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.08 E-value: 4.68e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPttpkepaptttksaptttkEPAPTTTKSAPTTPKEPS 460
Cdd:PRK14954  382 PSPAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSP-------------------ASAPTPEQQPPVARSAPL 442

                          90
                  ....*....|....*..
gi 735997422  461 PTTTKEPAPTTPKEPAP 477
Cdd:PRK14954  443 PPSPQASAPRNVASGKP 459

PRK10819

transport protein TonB; Provisional

381-497

4.72e-03

transport protein TonB; Provisional

Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 40.44 E-value: 4.72e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK-EP 459
Cdd:PRK10819   42 PAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIPKPEPKPKPKPKPKPKPVKKVEEQPKrEV 121

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 735997422  460 SPTTTKEPAPTTPKEPAPTTPKKPAPTTPKePAPTTPK 497
Cdd:PRK10819  122 KPVEPRPASPFENTAPARPTSSTATAAASK-PVTSVSS 158

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

395-455

5.03e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.65 E-value: 5.03e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997422   395 KKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTT 455
Cdd:TIGR00601   77 PKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPST 137

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

230-355

5.07e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.24 E-value: 5.07e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  230 PTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTpttiKSAPTTPKEPAPtttkSAPTTPKEPAPTTTK 309
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAA----ASAPAAPPAAAP----PAPVAAPAAAAPAAA 437

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 735997422  310 EPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP 355
Cdd:PRK14951  438 PAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAP 483

PRK13914

invasion associated endopeptidase;

280-487

5.21e-03

invasion associated endopeptidase;

Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 40.94 E-value: 5.21e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPapttpKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 359
Cdd:PRK13914  142 KVTSTPVAPTQEVKKETTTQQAAPAAETKTEV-----KQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVK 216

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  360 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKpapTTPKEPAPTTPKEPAP----------TTTKEPSPTTPKEP 429
Cdd:PRK13914  217 YGVSVQDIMSWNNLSSSSIYVGQKLAIKQTANTATPK---AEVKTEAPAAEKQAAPvvkentntntATTEKKETTTQQQT 293

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  430 APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 487
Cdd:PRK13914  294 APKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNSNT 351

PRK10905

cell division protein DamX; Validated

384-495

5.27e-03

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 5.27e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  384 TTPKEPAPTAPKKPAPTTPKepAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKsaptttkepAPTTTKSAPTTPKEPSPTT 463
Cdd:PRK10905  122 TLPTEPATVAPVRNGNASRQ--TAKTQTAERPATTRPARKQAVIEPKKPQAT---------AKTEPKPVAQTPKRTEPAA 190

                          90       100       110
                  ....*....|....*....|....*....|..
gi 735997422  464 TKEPAPTtpkePAPTTPKKPAPTTPKEPAPTT 495
Cdd:PRK10905  191 PVASTKA----PAATSTPAPKETATTAPVQTA 218

PHA03378

EBNA-3B; Provisional

290-481

5.34e-03

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.21 E-value: 5.34e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  290 PTTTKSAPTTPKEPAPTTTKEPA----PTTPKEPAPTTTKEPAPTTTKSAPttpkePAPTTPKKPAPTTPKEPAPTTPKE 365
Cdd:PHA03378  676 PSPTGANTMLPIQWAPGTMQPPPraptPMRPPAAPPGRAQRPAAATGRARP-----PAAAPGRARPPAAAPGRARPPAAA 750

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  366 PTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPA 445
Cdd:PHA03378  751 PGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLT 830

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 735997422  446 PTTTKSAPTTpKEPSPTTTKEPAPTTPKEPAPTTPK 481
Cdd:PHA03378  831 GGVKRGRPSL-KKPAALERQAAAGPTPSPGSGTSDK 865

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

539-639

5.34e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 5.34e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  539 LAPTTPEKPAPTTPEelapttPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTT-PKEPAPTTPKEPAPTTPKETAPTTPK 617
Cdd:PRK14950  360 LVPVPAPQPAKPTAA------APSPVRPTPAPSTRPKAAAAANIPPKEPVRETaTPPPVPPRPVAPPVPHTPESAPKLTR 433

                          90       100
                  ....*....|....*....|..
gi 735997422  618 GTAPTtlkEPAPTTPKKPAPKE 639
Cdd:PRK14950  434 AAIPV---DEKPKYTPPAPPKE 452

PRK14971

DNA polymerase III subunit gamma/tau;

279-407

5.66e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 40.91 E-value: 5.66e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  279 KSAPTTPKEPA-PTTTKSAPTTPkePAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 357
Cdd:PRK14971  369 ASGGRGPKQHIkPVFTQPAAAPQ--PSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQA 446

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 735997422  358 paPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAP 407
Cdd:PRK14971  447 --VRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQK 494

COG5373

Uncharacterized membrane protein [Function unknown];

577-639

5.79e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 5.79e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997422  577 KAAAPNTPKEPAPT---TPKEPAPTTPKEPAPTTPkETAPTTPKGTAPTTLKEPAPTTP-KKPAPKE 639
Cdd:COG5373    40 AAEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPaAAPAAAS 105

COG5373

Uncharacterized membrane protein [Function unknown];

403-479

5.88e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 5.88e-03

                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997422  403 KEPAPTTPKEPAPTTTKEPSPTTPkepaptttksapTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 479
Cdd:COG5373    40 AAEAASAPAEPEPEAAAAATAAAP------------EAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

Chi1

COG3469

Chitinase [Carbohydrate transport and metabolism];

280-427

6.00e-03

Chitinase [Carbohydrate transport and metabolism];

Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.89 E-value: 6.00e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  280 SAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPA 359
Cdd:COG3469    67 SSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGS 146

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  360 PTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK 427
Cdd:COG3469   147 TTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLPK 214

PRK13335

superantigen-like protein SSL3; Reviewed;

211-348

6.07e-03

superantigen-like protein SSL3; Reviewed;

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 40.49 E-value: 6.07e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  211 TTSAKETQSIEKTSAkDLAPTSKV--LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEP 288
Cdd:PRK13335   24 TTQSVKAEKIQSTKV-DKVPTLKAerLAMINITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEE 102

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 735997422  289 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-----TTTKSAPTTPKEPAPTTPK 348
Cdd:PRK13335  103 QKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPmqstkSDTPQSPTIKQAQTDMTPK 167

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

206-326

6.12e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.95 E-value: 6.12e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  206 DGKEKTTS----AKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPAsttpkeptpttiKSA 281
Cdd:PRK14950  338 DFQLRTTSygqlPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEP------------VRE 405

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 735997422  282 PTTPKEPAPTTTKSAPTTPKEPAPTTTKE--PAPTTPKEPAPTTTKE 326
Cdd:PRK14950  406 TATPPPVPPRPVAPPVPHTPESAPKLTRAaiPVDEKPKYTPPAPPKE 452

PRK14948

DNA polymerase III subunit gamma/tau;

266-423

6.13e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 40.72 E-value: 6.13e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  266 ASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP--- 342
Cdd:PRK14948  361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPsln 440

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  343 ----------------------------------------------------------------------------APTT 346
Cdd:PRK14948  441 leelwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnlesqsgsASNT 520

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 735997422  347 PKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKepaPTTPKEPAPTTTKEPSP 423
Cdd:PRK14948  521 AKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPP---PPIPEEPTPSPTKDSSP 594

PRK11633

cell division protein DedD; Provisional

290-400

6.28e-03

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.60 E-value: 6.28e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  290 PTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPapttpkeptpt 369
Cdd:PRK11633   57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKV----------- 125

                          90       100       110
                  ....*....|....*....|....*....|.
gi 735997422  370 tpkepapttkEPAPTTPKEPAPTAPKKPAPT 400
Cdd:PRK11633  126 ----------EAPPAPKPEPKPVVEEKAAPT 146

rne

PRK10811

ribonuclease E; Reviewed

353-516

6.29e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.18 E-value: 6.29e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  353 TTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPkkPAPTTPKEPAPTTpkEPAPTTTKEPSPTTPK---EP 429
Cdd:PRK10811  848 VRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVE--AVAEVVEEPVVVA--EPQPEEVVVVETTHPEviaAP 923

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  430 APTTTKS-APTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPA 508
Cdd:PRK10811  924 VTEQPQViTESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAP 1003


                  ....*...
gi 735997422  509 PTTPKEPA 516
Cdd:PRK10811 1004 AQVPEATV 1011

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

584-641

6.64e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 40.70 E-value: 6.64e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 735997422  584 PKEPAPTTPKEPAPTTPKEPAPTTPKETAP---TTPKGTAPTTLKEPAPTTPKKPAPKELA 641
Cdd:PRK14954  395 PEPDLPQPDRHPGPAKPEAPGARPAELPSPasaPTPEQQPPVARSAPLPPSPQASAPRNVA 455

PRK12757

cell division protein FtsN; Provisional

381-430

6.75e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.03 E-value: 6.75e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 735997422  381 PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPA 430
Cdd:PRK12757  131 PATTAQPQPVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

PRK12727

flagellar biosynthesis protein FlhF;

282-490

6.92e-03

flagellar biosynthesis protein FlhF;

Pssm-ID: 237182 [Multi-domain] Cd Length: 559 Bit Score: 40.74 E-value: 6.92e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  282 PTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTtpkkPAPTTPKEPAPT 361
Cdd:PRK12727   63 PATAAAPAPAPQAPTKPAAPVHAPLKLSANANMSQRQRVASAAEDMIAAMALRQPVSVPRQAPA----AAPVRAASIPSP 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  362 TPKEPTPTTPKEPAPTTKEPAPTTPKEPAptapkKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKePAPTTTKSAPTTT 441
Cdd:PRK12727  139 AAQALAHAAAVRTAPRQEHALSAVPEQLF-----ADFLTTAPVPRAPVQAPVVAAPAPVPAIAAAL-AAHAAYAQDDDEQ 212

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 735997422  442 KEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 490
Cdd:PRK12727  213 LDDDGFDLDDALPQILPPAALPPIVVAPAAPAALAAVAAAAPAPQNDEE 261

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

459-554

7.69e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 40.64 E-value: 7.69e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  459 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPkepaptttkkpapttpKEPAPTTPKETAPTTPKKLTPTTPEK 538
Cdd:PRK12270   38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP----------------AAAAPAAPPKPAAAAAAAAAPAAPPA 101

                          90
                  ....*....|....*.
gi 735997422  539 LAPTTPEKPAPTTPEE 554
Cdd:PRK12270  102 AAAAAAPAAAAVEDEV 117

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

301-428

7.94e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 40.22 E-value: 7.94e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  301 KEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkE 380
Cdd:COG3266   256 KAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAA------------------------A 311

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 735997422  381 PAPTTPKEPAPTA--PKKPAPTTPKEPAP-TTPKEPAPTTTKEPSPTTPKE 428
Cdd:COG3266   312 AAPAEAAAPQPTAakPVVTETAAPAAPAPeAAAAAAAPAAPAVAKKLAADE 362

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

330-425

7.96e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 40.26 E-value: 7.96e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422   330 TTTKSAPTTPKEPAPTTPKKPAPTTPkepapttpkeptpttpkepapttkePAPTTPKEPAPTAPKKPAPTTPKEPAPTT 409
Cdd:TIGR00601   77 PKTGTGKVAPPAATPTSAPTPTPSPP-------------------------ASPASGMSAAPASAVEEKSPSEESATATA 131

                           90
                   ....*....|....*.
gi 735997422   410 PKEPAPTTTKEPSPTT 425
Cdd:TIGR00601  132 PESPSTSVPSSGSDAA 147

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

655-750

8.31e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 8.31e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  655 KPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTP 730
Cdd:PRK14951  378 KKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAAsapaAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAP 457

                          90       100
                  ....*....|....*....|
gi 735997422  731 KETAPTTPKEPAPTTPKKPA 750
Cdd:PRK14951  458 ETVAIPVRVAPEPAVASAAP 477

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

285-342

8.91e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.05 E-value: 8.91e-03

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  285 PKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP 342
Cdd:PTZ00144  124 PPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTP 181

SAV_2336_NTERM

NF041121

SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ...

280-347

9.11e-03

Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.99 E-value: 9.11e-03

                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 735997422  280 SAPTTPKEPAPTTTkSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP 347
Cdd:NF041121   19 AAPPSPEGPAPTAA-SQPATPPPPAAPPSPPGDPPEPPAPEPAPLPAPYPGSLAPPPPPPPGPAGAAP 85

PHA03307

transcriptional regulator ICP4; Provisional

594-829

9.14e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.54 E-value: 9.14e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  594 EPAPTTPKEPAPTTPKETAPTtPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKEPA 673
Cdd:PHA03307   52 AVTVVAGAAACDRFEPPTGPP-PGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSP 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  674 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTT 753
Cdd:PHA03307  131 APDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRS 210

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 735997422  754 PETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER 829
Cdd:PHA03307  211 SPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

612-745

9.21e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 9.21e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  612 APTTPKGTAPTTLKEPAPTTP-KKPAPKELAPTTTKEPtsttsdkPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAP 690
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPaAAPVAQAAAAPAPAAA-------PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAA 441

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 735997422  691 TTLKEPAPTTPKKPAPKELAptttkgPTSTTSDKPAPTTPKETAPTTPKEPAPTT 745
Cdd:PRK14951  442 PAAVALAPAPPAQAAPETVA------IPVRVAPEPAVASAAPAPAAAPAAARLTP 490

PRK13042

superantigen-like protein SSL4; Reviewed;

598-686

9.23e-03

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 39.62 E-value: 9.23e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  598 TTPKEPAPTTPKETAPTTPKGTAPTTlkepaptTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKGTAPTTPKepAPTTP 677
Cdd:PRK13042   23 TTTQAANATTPSSTKVEAPQSTPPST-------KVEAPQSKPNATTPPSTKVEAPQQTPNATTPSSTKVETPQ--SPTTK 93


                  ....*....
gi 735997422  678 KEPAPTTPK 686
Cdd:PRK13042   94 QVPTEINPK 102

PRK04654

sec-independent translocase; Provisional

388-483

9.43e-03

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 39.02 E-value: 9.43e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  388 EPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAptttksaptttkePAPTTTKSAPTTPKEPSPTTTKEP 467
Cdd:PRK04654  132 EPGAGQAHTPVPAPAPVIAQAQPIAPAPHQTLVPAPHDTIVPA-------------PHAAHLPSAPATPVSVAPVDAGTS 198

                          90
                  ....*....|....*.
gi 735997422  468 APTTPKEPAPTTPKKP 483
Cdd:PRK04654  199 ASPTPSEPTKIQEKQP 214

PRK10905

cell division protein DamX; Validated

406-543

9.45e-03

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 39.92 E-value: 9.45e-03

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 735997422  406 APTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEP-----APTTPKEPAPTTP 480
Cdd:PRK10905  104 ALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQAVIEPkkpqaTAKTEPKPVAQTP 183

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 735997422  481 KKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTT 543
Cdd:PRK10905  184 KRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSS 246

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

447-496

9.46e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.88 E-value: 9.46e-03

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 735997422   447 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP---TTPKKPAPTTPKEPAPTTP 496
Cdd:TIGR00601   83 KVAPPAATPTSAPTPTPSPPASPASGMSAAPasaVEEKSPSEESATATAPESP 135

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01