|
Name |
Accession |
Description |
Interval |
E-value |
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
38-212 |
1.06e-44 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 160.98 E-value: 1.06e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 38 WRKLKNSQEAQKRQATLVRKLQAKVLQYRSWCQDLEKRLEA---------------TGGLIPQRWESVEEPNLEQLLIRL 102
Cdd:pfam15035 1 RRKLQAYQEAQQRQAQLVQKLQAKVLQYKKRCSELEQQLLEktselektelllrklTLEPRLQRLEREHSADLEEALIRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 103 EEEQQRCESLVEVNTELRLHMEKADVVNKALQEDVEKLTVDWSRARDELVRKESQWRMEQEFFKGYLRGEHGRLLNLWRE 182
Cdd:pfam15035 81 EEERQRSESLSQVNSLLREQLEQASRANEALREDLQKLTNDWERAREELEQKESEWRKEEEAFNEYLSSEHSRLLSLWRE 160
|
170 180 190
....*....|....*....|....*....|
gi 194018503 183 VVTFRRHFLKMKSATDRDLTELKAEHARLS 212
Cdd:pfam15035 161 VVAVRRQFTELKTATERDLSELKTEFSRTS 190
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
476-1053 |
3.06e-24 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 111.57 E-value: 3.06e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 476 LQGEVDSLSRERELLQKARgELQQQLEVLEQEAWRLRRmnmelqlqgDSAQGEKLEQQEELHLAVRERERLQETLVGLEA 555
Cdd:COG1196 198 LERQLEPLERQAEKAERYR-ELKEELKELEAELLLLKL---------RELEAELEELEAELEELEAELEELEAELAELEA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 556 kqseslsELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKV 635
Cdd:COG1196 268 -------ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 636 ELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELK 715
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 716 DKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNl 795
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEA- 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 796 fEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTRAEQ----EWDAVARQLAQAEQEGQAS------ 865
Cdd:COG1196 500 -EADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQnivvEDDEVAAAAIEYLKAAKAGratflp 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 866 LERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIR-----AQREEERSQADSALYQ 940
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRravtlAGRLREVTLEGEGGSA 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 941 MQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAfQKDK 1020
Cdd:COG1196 659 GGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE-REEL 737
|
570 580 590
....*....|....*....|....*....|...
gi 194018503 1021 LDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVK 1053
Cdd:COG1196 738 LEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1801-2318 |
5.64e-23 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 107.72 E-value: 5.64e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1801 QEAKEQGELREQVLQG-QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHRE 1879
Cdd:COG1196 216 RELKEELKELEAELLLlKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1880 QVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALR 1959
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1960 AENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRiREGEI 2039
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAE-EEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2040 QAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAqreeeilmL 2119
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGA--------V 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2120 REASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERE 2199
Cdd:COG1196 527 AVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2200 SEQQRLQEELVLSRQALEEQQ-SGGPHSTSRADQGPKVGQGSQSGEVETEPSPGVEEKERLTQRLERLQQAVAELEVDRS 2278
Cdd:COG1196 607 DLREADARYYVLGDTLLGRTLvAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 194018503 2279 KLQCHNAQLRTALEQVERERRKLKRDSVRASRAGSLEARE 2318
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEAL 726
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1591-2122 |
5.44e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 104.25 E-value: 5.44e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1591 ELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKG 1670
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1671 QELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKE 1750
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1751 VEcQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQgELREQVLQGQLEEAQRDLAQRDH 1830
Cdd:COG1196 396 AE-LAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEE-EAELEEEEEALLELLAELLEEAA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1831 ELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGeLEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESR 1910
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL-LAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1911 EHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAAL 1990
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1991 QEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEK 2070
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 194018503 2071 AGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREA 2122
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE 764
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1747-2304 |
6.90e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 104.25 E-value: 6.90e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1747 KEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLA 1826
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1827 QRDHELETLRQEKQQTQDQEESMKlktsALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLR 1906
Cdd:COG1196 303 DIARLEERRRELEERLEELEEELA----ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1907 AESREHEKAVLALQQRCAEQAQEHEAEARTLQDswlqAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKA 1986
Cdd:COG1196 379 EELEELAEELLEALRAAAELAAQLEELEEAEEA----LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1987 QAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQ----QELCQKKE 2062
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLagavAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2063 ELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLT-VAQREEEILMLREASSPRHRALPAEKPALQPLP 2141
Cdd:COG1196 535 AYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDkIRARAALAAALARGAIGAAVDLVASDLREADAR 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2142 AQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERESEQQRLQEELVLSRQALEEQQS 2221
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2222 GGPHSTSRADQGPKVGQGSQSGEVETEPSpgVEEKERLTQRLERLQQAVAELEVDRSKLQCHNAQLRTALEQVERERRKL 2301
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEE--EALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERL 772
|
...
gi 194018503 2302 KRD 2304
Cdd:COG1196 773 ERE 775
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
432-973 |
6.16e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.78 E-value: 6.16e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 432 RALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRL 511
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 512 RRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAA 591
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 592 LARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAE 671
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAAL 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 672 AERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQ 751
Cdd:COG1196 475 LEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 752 EKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVK 831
Cdd:COG1196 555 DDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEA 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 832 CLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELET 911
Cdd:COG1196 635 ALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEE 714
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 912 KLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRT---QKELADASQQLERL 973
Cdd:COG1196 715 ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLeelERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1694-2274 |
2.12e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 99.24 E-value: 2.12e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1694 LEEDLEQIKHSLRERS-QELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQL 1772
Cdd:COG1196 218 LKEELKELEAELLLLKlRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1773 QGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQvlqgQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLK 1852
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE----ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1853 TSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEA 1932
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1933 EARTLQdswlQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQE-KEQSLLEQAELSHTLEAST 2011
Cdd:COG1196 454 LEEEEE----ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvKAALLLAGLRGLAGAVAVL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2012 AALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHL--QQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQ 2089
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAgrATFLPLDKIRARAALAAALARGAIGAAVDLVASDLR 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2090 ERQEETRRLLESLKELQLTVAQREEEILMLREASSpRHRALPAEKPALQPLPA---QQELERLQTALRQTEAREIEWREK 2166
Cdd:COG1196 610 EADARYYVLGDTLLGRTLVAARLEAALRRAVTLAG-RLREVTLEGEGGSAGGSltgGSRRELLAALLEAEAELEELAERL 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2167 AQDLALSLAQSKASISSLQEITMFLQASVLERESEQQRLQEELVLSRQALEEQQsggphstsradqgpkvGQGSQSGEVE 2246
Cdd:COG1196 689 AEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELL----------------EEEELLEEEA 752
|
570 580
....*....|....*....|....*...
gi 194018503 2247 TEPSPGVEEKERLTQRLERLQQAVAELE 2274
Cdd:COG1196 753 LEELPEPPDLEELERELERLEREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1268-2070 |
4.67e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 98.21 E-value: 4.67e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1268 ARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAEL 1347
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1348 QKMEAQNDRELLQASKEKLSAQVEHLQAcvaeaqaqadAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVA 1427
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEE----------KLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRS 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1428 QGKALQENLALLAQTLSNREREVETLQAEVQELekQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPM 1507
Cdd:TIGR02168 387 KVAQLELQIASLNNEIERLEARLERLEDRRERL--QQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALE 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1508 AVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLE----------QKAQVIESQRGQIQDL---KKQLGTLECLALE 1574
Cdd:TIGR02168 465 ELREELEEAEQALDAAERELAQLQARLDSLERLQENLEgfsegvkallKNQSGLSGILGVLSELisvDEGYEAAIEAALG 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1575 LEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEeRSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDE 1654
Cdd:TIGR02168 545 GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSI-KGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLG 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1655 LQKQQEQLAQALERKGQELvlQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDgkspskgqr 1734
Cdd:TIGR02168 624 GVLVVDDLDNALELAKKLR--PGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEK--------- 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1735 gslehlkliLRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHL-QEAKEQGELREQ- 1812
Cdd:TIGR02168 693 ---------IAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIaQLSKELTELEAEi 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1813 -VLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVE 1891
Cdd:TIGR02168 764 eELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDL 843
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1892 GRQVRALEEVLGDLRAESREHEKAVLALQqrcaEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEA 1971
Cdd:TIGR02168 844 EEQIEELSEDIESLAAEIEELEELIEELE----SELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEE 919
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1972 AVSQAEALQEALSKAQAALQEKEQSLLEQAELS-HTLEASTAALQATLDTCQASARQLEEALrIREGEIQAQALQHHEVT 2050
Cdd:TIGR02168 920 LREKLAQLELRLEGLEVRIDNLQERLSEEYSLTlEEAEALENKIEDDEEEARRRLKRLENKI-KELGPVNLAAIEEYEEL 998
|
810 820
....*....|....*....|
gi 194018503 2051 QHLQQELCQKKEELRQLLEK 2070
Cdd:TIGR02168 999 KERYDFLTAQKEDLTEAKET 1018
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
865-1547 |
9.82e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 97.05 E-value: 9.82e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 865 SLERQKVAHEEEVNRLQEKWEKERSwLQQELDKTLETLERERAELETKLREQQTEMEAIRA------QREEERSQADSAL 938
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTA-ELQELEEKLEELRLEVSELEEEIEELQKELYALANeisrleQQKQILRERLANL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 939 YQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKlKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQK 1018
Cdd:TIGR02168 315 ERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE-AELEELEAELEELESRLEELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1019 DKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQ-----ECSRIQKELEKENASLALSLVEKEKRLLILQEADSVR 1093
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEeaelkELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1094 QQELSSLRQDIQEAQEGQRELGVQVELLRQE---------VKEKEADFVAREAQLLE-ELEASRVAEQQLRASL------ 1157
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFsegvkallkNQSGLSGILGVLSELISvDEGYEAAIEAALGGRLqavvve 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1158 -------------WAQEAKATQLQL--------------QLRSTESQLEALVAEQQPENQAQAQLASLCS--VLQQALGS 1208
Cdd:TIGR02168 554 nlnaakkaiaflkQNELGRVTFLPLdsikgteiqgndreILKNIEGFLGVAKDLVKFDPKLRKALSYLLGgvLVVDDLDN 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1209 ACESRPELRGGGdsapTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTD 1288
Cdd:TIGR02168 634 ALELAKKLRPGY----RIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEE 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1289 TEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSA 1368
Cdd:TIGR02168 710 LEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEA 789
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1369 QVEHLQACVAEAQAQADAaavLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNRER 1448
Cdd:TIGR02168 790 QIEQLKEELKALREALDE---LRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEE 866
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1449 EVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRE--- 1525
Cdd:TIGR02168 867 LIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQErls 946
|
730 740 750
....*....|....*....|....*....|....
gi 194018503 1526 ------------LENDREAQRSVLEHQLLDLEQK 1547
Cdd:TIGR02168 947 eeysltleeaeaLENKIEDDEEEARRRLKRLENK 980
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
893-1465 |
3.49e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 95.39 E-value: 3.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 893 QELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSalyqmqletekervsLLETLLRTQKELADASQQLER 972
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEE---------------LELELEEAQAEEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 973 LRQDMKIQKLKEQettgmlqaQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKV 1052
Cdd:COG1196 300 LEQDIARLEERRR--------ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1053 KVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADf 1132
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEE- 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1133 VAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQA--QAQLASLCSVLQQALGSAC 1210
Cdd:COG1196 451 EAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvkAALLLAGLRGLAGAVAVLI 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1211 ESRPELRGGGDSAPTLWG-PDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDT 1289
Cdd:COG1196 531 GVEAAYEAALEAALAAALqNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLRE 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1290 EAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQ 1369
Cdd:COG1196 611 ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAE 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1370 VEHLQAcvaeaqaqADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSnRERE 1449
Cdd:COG1196 691 EELELE--------EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELP-EPPD 761
|
570
....*....|....*.
gi 194018503 1450 VETLQAEVQELEKQRE 1465
Cdd:COG1196 762 LEELERELERLEREIE 777
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
586-1375 |
5.79e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 94.74 E-value: 5.79e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 586 VEVAAALARAEQSIVELSGSENSLKAEVAdlraAAVKLGALNEAL-ALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSA 664
Cdd:TIGR02168 182 ERTRENLDRLEDILNELERQLKSLERQAE----KAERYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 665 LQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEE 744
Cdd:TIGR02168 258 LTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 745 TLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKE 824
Cdd:TIGR02168 338 ELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 825 viqgevkclklELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLER 904
Cdd:TIGR02168 418 -----------RLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQ 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 905 ERAE---LETKLREQQTEMEAIRAQ-REEERSQADSALYQMQLETEKERVSLLETLLR------TQKELADASQQLERLR 974
Cdd:TIGR02168 487 LQARldsLERLQENLEGFSEGVKALlKNQSGLSGILGVLSELISVDEGYEAAIEAALGgrlqavVVENLNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 975 QDmKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDD---SQRLVKEEIEEK 1051
Cdd:TIGR02168 567 QN-ELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDldnALELAKKLRPGY 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1052 VKVAQECSRIQKE--LEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKE 1129
Cdd:TIGR02168 646 RIVTLDGDLVRPGgvITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1130 ADFVAREAQLLEELEASRVAEQ---QLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQAL 1206
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEEriaQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAL 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1207 GSACESRPELRGggdsaptlwgpdpdqngasrlfkrwslptalspeavalALQKLHQDVWKARQARDDLRDQVQKLVQRL 1286
Cdd:TIGR02168 806 DELRAELTLLNE--------------------------------------EAANLRERLESLERRIAATERRLEDLEEQI 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1287 TDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKL 1366
Cdd:TIGR02168 848 EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
|
....*....
gi 194018503 1367 SAQVEHLQA 1375
Cdd:TIGR02168 928 ELRLEGLEV 936
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
865-1668 |
2.26e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.81 E-value: 2.26e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 865 SLERQKvaheEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADsalyqmqlE 944
Cdd:TIGR02168 204 SLERQA----EKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLE--------E 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 945 TEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKlKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQ 1024
Cdd:TIGR02168 272 LRLEVSELEEEIEELQKELYALANEISRLEQQKQILR-ERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1025 KQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDI 1104
Cdd:TIGR02168 351 EELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1105 QEAQegQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASlwaqEAKATQLQLQLRSTESQLE----- 1179
Cdd:TIGR02168 431 EEAE--LKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA----ERELAQLQARLDSLERLQEnlegf 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1180 -----ALVAEQQPENQAQAQLASLCSV-------LQQALGS---------------ACESRPELRGGGDSAPTLWGPDPD 1232
Cdd:TIGR02168 505 segvkALLKNQSGLSGILGVLSELISVdegyeaaIEAALGGrlqavvvenlnaakkAIAFLKQNELGRVTFLPLDSIKGT 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1233 QNGASRLFKRWSLPTALS--------PEAVALALQKLHQDVWKARQARDDLRDQVQK-------------------LVQR 1285
Cdd:TIGR02168 585 EIQGNDREILKNIEGFLGvakdlvkfDPKLRKALSYLLGGVLVVDDLDNALELAKKLrpgyrivtldgdlvrpggvITGG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1286 LTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEK 1365
Cdd:TIGR02168 665 SAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQ 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1366 LSAQVEHLQAcvaEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSN 1445
Cdd:TIGR02168 745 LEERIAQLSK---ELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAAN 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1446 REREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLqqeqiqeleqcrsvLEHLPMAVQEREQKLSVQRDQIRE 1525
Cdd:TIGR02168 822 LRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE--------------LEELIEELESELEALLNERASLEE 887
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1526 LENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALEleeshhKVESQQKMITElEGQREMQRVALTH 1605
Cdd:TIGR02168 888 ALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEV------RIDNLQERLSE-EYSLTLEEAEALE 960
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 194018503 1606 LTLDLEERSQElqaqsSQLHELENHSTHL----------AKELQERDQEVTsqrQQIDELQKQQEQLAQALER 1668
Cdd:TIGR02168 961 NKIEDDEEEAR-----RRLKRLENKIKELgpvnlaaieeYEELKERYDFLT---AQKEDLTEAKETLEEAIEE 1025
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1300-2069 |
2.48e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.43 E-value: 2.48e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1300 LQDLQRQLSQSQEEKS-KWEGRQNSLESELRDLHEtaasLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQAcva 1378
Cdd:TIGR02168 202 LKSLERQAEKAERYKElKAELRELELALLVLRLEE----LREELEELQEELKEAEEELEELTAELQELEEKLEELRL--- 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1379 eaqaqadAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQ 1458
Cdd:TIGR02168 275 -------EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1459 ELEKQREMQKAALEllsldlkkrsREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENdrEAQRSVLE 1538
Cdd:TIGR02168 348 ELKEELESLEAELE----------ELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEA--RLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1539 HQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKmitELEGQREMQRVALTHLTLDLEERSQELQ 1618
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALE---ELREELEEAEQALDAAERELAQLQARLD 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1619 AQSSQLHELENHSTHLAKELQERDQeVTSQRQQIDELQKQQEQLAQALERKGQELVL---------QKERIQVLEDQRTL 1689
Cdd:TIGR02168 493 SLERLQENLEGFSEGVKALLKNQSG-LSGILGVLSELISVDEGYEAAIEAALGGRLQavvvenlnaAKKAIAFLKQNELG 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1690 QTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQR--GSLEHLKLILRDKEKEVECQ-----QERIQELQ 1762
Cdd:TIGR02168 572 RVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalSYLLGGVLVVDDLDNALELAkklrpGYRIVTLD 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1763 GHM-----------GQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQV---LQGQLEEAQRDLAQR 1828
Cdd:TIGR02168 652 GDLvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEEleqLRKELEELSRQISAL 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1829 DHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAE 1908
Cdd:TIGR02168 732 RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAE 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1909 SREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAqATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQA 1988
Cdd:TIGR02168 812 LTLLNEEAANLRERLESLERRIAATERRLEDLEEQI-EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALA 890
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1989 ALQEKEQSL-LEQAELSHTLEASTAALQAtLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQL 2067
Cdd:TIGR02168 891 LLRSELEELsEELRELESKRSELRRELEE-LREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEE 969
|
..
gi 194018503 2068 LE 2069
Cdd:TIGR02168 970 AR 971
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
386-915 |
1.12e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 90.38 E-value: 1.12e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 386 DRALTLVQSVLTRRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGE 465
Cdd:COG1196 259 EAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 466 RDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERER 545
Cdd:COG1196 339 LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLER 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 546 LQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGA 625
Cdd:COG1196 419 LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 626 LNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELR 705
Cdd:COG1196 499 AEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 706 GTREEKEElkdkLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLR 785
Cdd:COG1196 579 LDKIRARA----ALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGE 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 786 SAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEviqgevkclKLELDAERTRAEQEWDAVARQLAQAEQEGQAS 865
Cdd:COG1196 655 GGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEEL---------ELEEALLAEEEEERELAEAEEERLEEELEEEA 725
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 194018503 866 LERQKVAHEEEVNRLQEKWEKERSWLQQE---LDKTLETLERERAELETKLRE 915
Cdd:COG1196 726 LEEQLEAEREELLEELLEEEELLEEEALEelpEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1392-2153 |
1.93e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.73 E-value: 1.93e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1392 EDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLsnrEREVETLQAEVQELEKQREMQKAAL 1471
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL---QKELYALANEISRLEQQKQILRERL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1472 ELLSLDLKKRSREVDLQqeqiqeleqcRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVI 1551
Cdd:TIGR02168 312 ANLERQLEELEAQLEEL----------ESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1552 ESQRGQIQDLKKQLgtleclaleleeshhkvESQQKMITELEGQREMQRVALTHLTLDLEERSQELQaqSSQLHELENHS 1631
Cdd:TIGR02168 382 ETLRSKVAQLELQI-----------------ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE--EAELKELQAEL 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1632 THLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKiLEEDLEQIKHSLRERSQE 1711
Cdd:TIGR02168 443 EELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG-FSEGVKALLKNQSGLSGI 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1712 LASQWQLVHERADDGKSPSKGQRGSLEHLklILRDKEKEVECQQERIQELQGHMGQLE--------------QQLQGLHR 1777
Cdd:TIGR02168 522 LGVLSELISVDEGYEAAIEAALGGRLQAV--VVENLNAAKKAIAFLKQNELGRVTFLPldsikgteiqgndrEILKNIEG 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1778 KVGETSLLLTHREQETATLQ---------QHLQEAKEQ-----GELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQ 1843
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKALSyllggvlvvDDLDNALELakklrPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREI 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1844 DQEESmklKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAEsrehekavlalQQRC 1923
Cdd:TIGR02168 680 EELEE---KIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAE-----------VEQL 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1924 AEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAEL 2003
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2004 SHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQE 2083
Cdd:TIGR02168 826 LESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRE 905
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 194018503 2084 KQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPALQPL------PAQQELERLQTAL 2153
Cdd:TIGR02168 906 LESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKieddeeEARRRLKRLENKI 981
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1252-1895 |
2.93e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 88.84 E-value: 2.93e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1252 EAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDL 1331
Cdd:COG1196 228 ELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1332 HETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQAcvaEAQAQADAAAVLEEDLRTARSALKLKNEELESE 1411
Cdd:COG1196 308 EERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE---ELEEAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1412 RERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALEllsldlkkrsrevdlqqeq 1491
Cdd:COG1196 385 AEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALE------------------- 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1492 iqeleqcrsvlehlpmAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECL 1571
Cdd:COG1196 446 ----------------EAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1572 ALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHElenhstHLAKELQERDQEVtsQRQQ 1651
Cdd:COG1196 510 VKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIE------YLKAAKAGRATFL--PLDK 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1652 IDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSK 1731
Cdd:COG1196 582 IRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGS 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1732 GQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELRE 1811
Cdd:COG1196 662 LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEEL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1812 QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESM-KLKTSALQ--AALEQAHATLKERQGELEEHREQVRRLQEEL 1888
Cdd:COG1196 742 LEEEELLEEEALEELPEPPDLEELERELERLEREIEALgPVNLLAIEeyEELEERYDFLSEQREDLEEARETLEEAIEEI 821
|
....*..
gi 194018503 1889 EVEGRQV 1895
Cdd:COG1196 822 DRETRER 828
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
432-1160 |
1.36e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.03 E-value: 1.36e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 432 RALREKLQKLtgERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLEVLEQEawrl 511
Cdd:TIGR02168 216 KELKAELREL--ELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKE---- 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 512 rrmnmelqLQGDSAQGEKLEQQEELHlaVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAA 591
Cdd:TIGR02168 290 --------LYALANEISRLEQQKQIL--RERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 592 LARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQlrsalQVDLAE 671
Cdd:TIGR02168 360 LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLK-----KLEEAE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 672 AERRREALWEKKTQLEtQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQ 751
Cdd:TIGR02168 435 LKELQAELEELEEELE-ELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 752 EKEALVRERAALEVRLQAVERDRQDLtEHVLGLRSAKEQLESN-----LFEAQQQNSVIQVTKGQLEVQIQTIIQAK--E 824
Cdd:TIGR02168 514 NQSGLSGILGVLSELISVDEGYEAAI-EAALGGRLQAVVVENLnaakkAIAFLKQNELGRVTFLPLDSIKGTEIQGNdrE 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 825 VIQGEVKCLKLELDAERTRAEQEWD--------AVARQLAQAEQEGQASLERQKV----------------AHEEEVNRL 880
Cdd:TIGR02168 593 ILKNIEGFLGVAKDLVKFDPKLRKAlsyllggvLVVDDLDNALELAKKLRPGYRIvtldgdlvrpggvitgGSAKTNSSI 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 881 QEKwEKERSWLQQELDKTLET---LERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERvSLLETLL 957
Cdd:TIGR02168 673 LER-RREIEELEEKIEELEEKiaeLEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVE-QLEERIA 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 958 RTQKELADASQQLERLRQDMKIQKLKEQETTGmLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAH 1037
Cdd:TIGR02168 751 QLSKELTELEAEIEELEERLEEAEEELAEAEA-EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESL 829
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1038 DDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQ 1117
Cdd:TIGR02168 830 ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESK 909
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 194018503 1118 VELLRQEVKEKEadfvAREAQLLEELEASRVAEQQLRASLWAQ 1160
Cdd:TIGR02168 910 RSELRRELEELR----EKLAQLELRLEGLEVRIDNLQERLSEE 948
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
817-1373 |
3.12e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.76 E-value: 3.12e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 817 QTIIQAKEVIQGEVKCLKLE-LDAERTRAEQEWDAVARQLAQAE---QEGQASLERQKVAHEE---EVNRLQEKWEKERS 889
Cdd:COG1196 216 RELKEELKELEAELLLLKLReLEAELEELEAELEELEAELEELEaelAELEAELEELRLELEElelELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 890 WLQQE------LDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQlETEKERVSLLETLLRTQKEL 963
Cdd:COG1196 296 ELARLeqdiarLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELE-EAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 964 ADASQQLERLRQDmKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRL 1043
Cdd:COG1196 375 AEAEEELEELAEE-LLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1044 VKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQdiQEAQEGQRELGVQVELLRQ 1123
Cdd:COG1196 454 LEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA--ALLLAGLRGLAGAVAVLIG 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1124 EVKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKAtqlqlqlRSTESQLEALVAEQQPENQAQAQLASLCSVLQ 1203
Cdd:COG1196 532 VEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAG-------RATFLPLDKIRARAALAAALARGAIGAAVDLV 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1204 QALGSACESRPELRGGGDSAPTLWGPDPDQNGASR-----LFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQ 1278
Cdd:COG1196 605 ASDLREADARYYVLGDTLLGRTLVAARLEAALRRAvtlagRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEEL 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1279 VQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDREL 1358
Cdd:COG1196 685 AERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE 764
|
570
....*....|....*
gi 194018503 1359 LQASKEKLSAQVEHL 1373
Cdd:COG1196 765 LERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
448-777 |
7.80e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 84.34 E-value: 7.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 448 LAGQTVGLQGevdSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQG 527
Cdd:TIGR02168 650 LDGDLVRPGG---VITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSR 726
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 528 EKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSEN 607
Cdd:TIGR02168 727 QISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD 806
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 608 SLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLE 687
Cdd:TIGR02168 807 ELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLE 886
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 688 TQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLAR--------AVQEKEALVRE 759
Cdd:TIGR02168 887 EALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEeysltleeAEALENKIEDD 966
|
330
....*....|....*...
gi 194018503 760 RAALEVRLQAVERDRQDL 777
Cdd:TIGR02168 967 EEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
455-1144 |
6.17e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 81.64 E-value: 6.17e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 455 LQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQE 534
Cdd:TIGR02168 244 LQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEA 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 535 ELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVA 614
Cdd:TIGR02168 324 QLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 615 DLRAaavKLGALNEALA-LDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKA 693
Cdd:TIGR02168 404 RLEA---RLERLEDRRErLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 694 EEAGAELQAELRGT---REEKEELKDKLSEAHHQQETATAHLEQLHQDAERQE-------------------ETLARAVQ 751
Cdd:TIGR02168 481 ERELAQLQARLDSLerlQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEgyeaaieaalggrlqavvvENLNAAKK 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 752 EKEALVRERA----------ALEVRLQAVERDRQDLTEHVLG----LRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQ 817
Cdd:TIGR02168 561 AIAFLKQNELgrvtflpldsIKGTEIQGNDREILKNIEGFLGvakdLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKK 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 818 T------------IIQAKEVIQG---EVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQE 882
Cdd:TIGR02168 641 LrpgyrivtldgdLVRPGGVITGgsaKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKE 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 883 KWEKERswLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQlETEKERVSLLETLLRTQKE 962
Cdd:TIGR02168 721 LEELSR--QISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELA-EAEAEIEELEAQIEQLKEE 797
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 963 LADASQQLERLR---QDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRD---DLAAFQKDKLDLQKQVEDLMSQLVA 1036
Cdd:TIGR02168 798 LKALREALDELRaelTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEElseDIESLAAEIEELEELIEELESELEA 877
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1037 HDDSQRLVKEEIEEKVKVAQECSRIQKELEKENaslalslVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEgqrELGV 1116
Cdd:TIGR02168 878 LLNERASLEEALALLRSELEELSEELRELESKR-------SELRRELEELREKLAQLELRLEGLEVRIDNLQE---RLSE 947
|
730 740
....*....|....*....|....*...
gi 194018503 1117 QVELLRQEVKEKEADFVAREAQLLEELE 1144
Cdd:TIGR02168 948 EYSLTLEEAEALENKIEDDEEEARRRLK 975
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1433-2273 |
1.15e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.49 E-value: 1.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1433 QENLALLAQTLSNREREVETLQAEVQELEKQREMQK----AALELLSLDLKKRSREVDLQQEQIQELeqcRSVLEHLPMA 1508
Cdd:TIGR02168 185 RENLDRLEDILNELERQLKSLERQAEKAERYKELKAelreLELALLVLRLEELREELEELQEELKEA---EEELEELTAE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1509 VQEREQKLSVQRDQIRELEND-REAQRSVLEHQLL--DLEQKAQVIESQRGQIQDLKKQLGTLECLALEleeshhKVESQ 1585
Cdd:TIGR02168 262 LQELEEKLEELRLEVSELEEEiEELQKELYALANEisRLEQQKQILRERLANLERQLEELEAQLEELES------KLDEL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1586 QKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQA 1665
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1666 LERKGQELVLQKERIQVLE----DQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLK 1741
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAElkelQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1742 LILRDKEKEVECQQERIQE---LQGHMGQLEQQL-------QGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGelRE 1811
Cdd:TIGR02168 496 RLQENLEGFSEGVKALLKNqsgLSGILGVLSELIsvdegyeAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELG--RV 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1812 QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAH--ATLKERQGELEEHREQVRRLQEELE 1889
Cdd:TIGR02168 574 TFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLvvDDLDNALELAKKLRPGYRIVTLDGD 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1890 VEGR------QVRALEEVLGDLRAESREHEKAVLALQQRCAE---QAQEHEAEARTLQDSWLQAQATLTEQEQELAALRA 1960
Cdd:TIGR02168 654 LVRPggvitgGSAKTNSSILERRREIEELEEKIEELEEKIAElekALAELRKELEELEEELEQLRKELEELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1961 ENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQ 2040
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2041 AQALQHHEVTQHLQQELcQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLES-LKELQLTVAQREEEILML 2119
Cdd:TIGR02168 814 LLNEEAANLRERLESLE-RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESeLEALLNERASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2120 REassprhralpaekpalqplpaqqELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQeitmflqasvLERE 2199
Cdd:TIGR02168 893 RS-----------------------ELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE----------VRID 939
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 194018503 2200 SEQQRLQEELVLSRQaleeqqsggphstsradqgpkvgqgsqsgEVETEPSPGVEEKERLTQRLERLQQAVAEL 2273
Cdd:TIGR02168 940 NLQERLSEEYSLTLE-----------------------------EAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
243-909 |
2.80e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 79.33 E-value: 2.80e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 243 ARLLLLVAKTQALEKEAHEKSQELMQLKSHGDlekaELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAEL 322
Cdd:TIGR02168 302 QQKQILRERLANLERQLEELEAQLEELESKLD----ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEEL 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 323 MEHEASLSRNAQEEKLSLQQVIKAITQAlasveeEDTVTQSSGHEDSLQSDCNGLSQfdpQDPDRALTLVQSVLTRRQQA 402
Cdd:TIGR02168 378 EEQLETLRSKVAQLELQIASLNNEIERL------EARLERLEDRRERLQQEIEELLK---KLEEAELKELQAELEELEEE 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 403 VQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDS 482
Cdd:TIGR02168 449 LEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSEL 528
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 483 LSREREL---LQKARGELQQQLEVLEQEAWRL-----------RRMNMEL-QLQGDSAQGEKLEQQEELHLAVRERERLQ 547
Cdd:TIGR02168 529 ISVDEGYeaaIEAALGGRLQAVVVENLNAAKKaiaflkqnelgRVTFLPLdSIKGTEIQGNDREILKNIEGFLGVAKDLV 608
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 548 ETLVGLEAKQSESLSELL---TLREALESSR----------LEGELLK-------------QERVEVAAALARAEQSIVE 601
Cdd:TIGR02168 609 KFDPKLRKALSYLLGGVLvvdDLDNALELAKklrpgyrivtLDGDLVRpggvitggsaktnSSILERRREIEELEEKIEE 688
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 602 LSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWE 681
Cdd:TIGR02168 689 LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEE 768
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 682 KKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEahhqqetatahleqLHQDAERQEETLARAVQEKEALVRERA 761
Cdd:TIGR02168 769 RLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDE--------------LRAELTLLNEEAANLRERLESLERRIA 834
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 762 ALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCL---KLELD 838
Cdd:TIGR02168 835 ATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELeskRSELR 914
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 194018503 839 AERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHE---EEVNRLQEKWEKERSWLQQELDKtletLERERAEL 909
Cdd:TIGR02168 915 RELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSltlEEAEALENKIEDDEEEARRRLKR----LENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1581-2302 |
1.72e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.63 E-value: 1.72e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1581 KVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQE 1660
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1661 QLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKhSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHL 1740
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE-SLEAELEELEAELEELESRLEELEEQLETLRSKVAQL 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1741 KLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHRE-QETATLQQHLQEAKEQGELREQVLQGQLE 1819
Cdd:TIGR02168 392 ELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAElEELEEELEELQEELERLEEALEELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1820 EAQRDLAQRDHELETLRQEKQQTQDQEEsmklktsalqaALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALE 1899
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLDSLERLQE-----------NLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1900 EVLGdlraesrEHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTeqeqelAALRAENQYSRRQEEAAVSQAEAL 1979
Cdd:TIGR02168 541 AALG-------GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKG------TEIQGNDREILKNIEGFLGVAKDL 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1980 QEALSKAQAALQ---------EKEQSLLEQAELSH------TLEASTAALQATL----DTCQASARQLEEALRIREGEIQ 2040
Cdd:TIGR02168 608 VKFDPKLRKALSyllggvlvvDDLDNALELAKKLRpgyrivTLDGDLVRPGGVItggsAKTNSSILERRREIEELEEKIE 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2041 AQALQHHEVTQHLQ---QELCQKKEELRQLL-EKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEI 2116
Cdd:TIGR02168 688 ELEEKIAELEKALAelrKELEELEEELEQLRkELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELE 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2117 LMLREASSPRHRALpAEKPALQplpaqQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVL 2196
Cdd:TIGR02168 768 ERLEEAEEELAEAE-AEIEELE-----AQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLE 841
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2197 ERESEQQRLQEELVLSRQALEEQQSGGPHSTSRADQGPKVGQGSQsgevetepspgvEEKERLTQRLERLQQAVAELEVD 2276
Cdd:TIGR02168 842 DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLE------------EALALLRSELEELSEELRELESK 909
|
730 740
....*....|....*....|....*.
gi 194018503 2277 RSKLQCHNAQLRTALEQVERERRKLK 2302
Cdd:TIGR02168 910 RSELRRELEELREKLAQLELRLEGLE 935
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1048-1921 |
1.95e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.63 E-value: 1.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1048 IEEKVKVAQECSRIQKEL-EKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELgvqvELLRQEVK 1126
Cdd:TIGR02168 205 LERQAEKAERYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEEL----RLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1127 EKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQAL 1206
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1207 GSACESRPELRGGgdsaptlwgpdpdqngasrlfkrwslptalsPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRL 1286
Cdd:TIGR02168 361 EELEAELEELESR-------------------------------LEELEEQLETLRSKVAQLELQIASLNNEIERLEARL 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1287 TDTEAQKSQVHSELQDLQRQLSQSQEEKSkwEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKL 1366
Cdd:TIGR02168 410 ERLEDRRERLQQEIEELLKKLEEAELKEL--QAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1367 SAQVEHLQACVAEAqaqadaaavleEDLRTARSALKLKNEELESERERAQALQE-QGELKVAQGKALQENLALLAqtlsn 1445
Cdd:TIGR02168 488 QARLDSLERLQENL-----------EGFSEGVKALLKNQSGLSGILGVLSELISvDEGYEAAIEAALGGRLQAVV----- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1446 rereVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRE 1525
Cdd:TIGR02168 552 ----VENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLV 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1526 LENDREA--QRSVLEHQLL------DL-----------EQKAQVIESQRGQIQDLKKQLGTLEClaleleeshhKVESQQ 1586
Cdd:TIGR02168 628 VDDLDNAleLAKKLRPGYRivtldgDLvrpggvitggsAKTNSSILERRREIEELEEKIEELEE----------KIAELE 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1587 KMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQAL 1666
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEEL 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1667 ERKGQELVLQKERIQVLEDQRTLQTKILEEdLEQIKHSLRERSQELASQWQLVHERADDgkspskgQRGSLEHLKLILRD 1746
Cdd:TIGR02168 778 AEAEAEIEELEAQIEQLKEELKALREALDE-LRAELTLLNEEAANLRERLESLERRIAA-------TERRLEDLEEQIEE 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1747 KEKEVECQQERIQELQGHMGQLEQQLQGLhrkvgetslllthrEQETATLQQHLQEAKEQGELREQVLQ---GQLEEAQR 1823
Cdd:TIGR02168 850 LSEDIESLAAEIEELEELIEELESELEAL--------------LNERASLEEALALLRSELEELSEELReleSKRSELRR 915
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1824 DLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKE-RQGELEEHREQVRRLQEELEVEGR-------QV 1895
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENkIEDDEEEARRRLKRLENKIKELGPvnlaaieEY 995
|
890 900
....*....|....*....|....*.
gi 194018503 1896 RALEEVLGDLRAESREHEKAVLALQQ 1921
Cdd:TIGR02168 996 EELKERYDFLTAQKEDLTEAKETLEE 1021
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1503-2302 |
2.11e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 76.31 E-value: 2.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1503 EHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLG-TLECLALELEESHHK 1581
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESqSQEDLRNQLQNTVHE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1582 VESQQKMITELEGQREMQRVALTHLTLDLEERSQEL--------QAQSSQLHELENHST--------HLAKELQERDQEV 1645
Cdd:pfam15921 154 LEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIrsilvdfeEASGKKIYEHDSMSTmhfrslgsAISKILRELDTEI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1646 TSQRQQIDELQKQQEQLAQALERKGQELVLQ-KERIQVLEDQRTLQTKILEEDleqiKHSLRERSQELASQWQLVHERAD 1724
Cdd:pfam15921 234 SYLKGRIFPVEDQLEALKSESQNKIELLLQQhQDRIEQLISEHEVEITGLTEK----ASSARSQANSIQSQLEIIQEQAR 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1725 DGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQElqghmgQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAK 1804
Cdd:pfam15921 310 NQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIE------ELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLL 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1805 EQGELREQVLQGQLEEAQR-------DLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQ------ 1871
Cdd:pfam15921 384 ADLHKREKELSLEKEQNKRlwdrdtgNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNeslekv 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1872 ----GELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVlalqqrcaeqaqeheaEARTLQDSWLQAQAT 1947
Cdd:pfam15921 464 ssltAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAI----------------EATNAEITKLRSRVD 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1948 LteQEQELAALRAENQYSRRQEeaavSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALqatldtcQASARQ 2027
Cdd:pfam15921 528 L--KLQELQHLKNEGDHLRNVQ----TECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAM-------QVEKAQ 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2028 LEEALRIREGEIQAQALQHHEVTQHLqQELCQKKEELRqlLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQl 2107
Cdd:pfam15921 595 LEKEINDRRLELQEFKILKDKKDAKI-RELEARVSDLE--LEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELN- 670
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2108 tVAQREEEILMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEI 2187
Cdd:pfam15921 671 -SLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSK 749
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2188 TMFLQASVLERESEQQRLQEElvlsRQALEEQQSggphstsradqgpkvgqgsqsgEVETEPSPGVEEKERLTQRLERLQ 2267
Cdd:pfam15921 750 IQFLEEAMTNANKEKHFLKEE----KNKLSQELS----------------------TVATEKNKMAGELEVLRSQERRLK 803
|
810 820 830
....*....|....*....|....*....|....*
gi 194018503 2268 QAVAELEVDRSKLQCHNAQLRTALEQVERERRKLK 2302
Cdd:pfam15921 804 EKVANMEVALDKASLQFAECQDIIQRQEQESVRLK 838
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
510-1217 |
3.24e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.86 E-value: 3.24e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 510 RLRRMNMELQLQGDsAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSE-SLSELLTLREALESSRLEGELLKQERVEV 588
Cdd:TIGR02168 180 KLERTRENLDRLED-ILNELERQLKSLERQAEKAERYKELKAELRELELAlLVLRLEELREELEELQEELKEAEEELEEL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 589 AAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVD 668
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 669 LAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLAR 748
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRER 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 749 AVQEKEALvrERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQg 828
Cdd:TIGR02168 419 LQQEIEEL--LKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE- 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 829 evkclkleldAERTRAEQEWDAVARQLAQAEQEGQAslerqkVAHEEEVNRLQEKWEKE-----RSWLQQELDKTLE--- 900
Cdd:TIGR02168 496 ----------RLQENLEGFSEGVKALLKNQSGLSGI------LGVLSELISVDEGYEAAieaalGGRLQAVVVENLNaak 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 901 ----TLERERAELETKLREQQTEMEAIRAQREEERSQADSAL-YQMQLETEKERVS-LLETLL---RTQKELADASQQLE 971
Cdd:TIGR02168 560 kaiaFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLgVAKDLVKFDPKLRkALSYLLggvLVVDDLDNALELAK 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 972 RLRQDMKIQKLK--------------EQETTGMLQ-----AQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMS 1032
Cdd:TIGR02168 640 KLRPGYRIVTLDgdlvrpggvitggsAKTNSSILErrreiEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1033 QLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEgqr 1112
Cdd:TIGR02168 720 ELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE--- 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1113 elgvQVELLRQEVKEKEADFvareAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQ 1192
Cdd:TIGR02168 797 ----ELKALREALDELRAEL----TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELI 868
|
730 740
....*....|....*....|....*
gi 194018503 1193 AQLASLCSVLQQALGSACESRPELR 1217
Cdd:TIGR02168 869 EELESELEALLNERASLEEALALLR 893
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
850-1565 |
4.15e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.49 E-value: 4.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 850 AVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQqELDKTLETLERERAELEtKLREQQTEMEAIRAQree 929
Cdd:TIGR02169 152 PVERRKIIDEIAGVAEFDRKKEKALEELEEVEENIERLDLIID-EKRQQLERLRREREKAE-RYQALLKEKREYEGY--- 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 930 ERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQH 1009
Cdd:TIGR02169 227 ELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1010 RDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEA 1089
Cdd:TIGR02169 307 ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1090 DSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLeELEASRvaeQQLRASLWAQEAKATQLQL 1169
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN-ELEEEK---EDKALEIKKQEWKLEQLAA 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1170 QLRSTESQLEALVAEQqpeNQAQAQLASLCSVLQQALGSACESRPELRGG-------GDSAPTLWG-------------- 1228
Cdd:TIGR02169 463 DLSKYEQELYDLKEEY---DRVEKELSKLQRELAEAEAQARASEERVRGGraveevlKASIQGVHGtvaqlgsvgeryat 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1229 ----------------PDPDQNGASRLFKR-----------------WSLPTALSPE------------------AVALA 1257
Cdd:TIGR02169 540 aievaagnrlnnvvveDDAVAKEAIELLKRrkagratflplnkmrdeRRDLSILSEDgvigfavdlvefdpkyepAFKYV 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1258 LQK--LHQDVWKARQARDDLR-------------------DQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSK 1316
Cdd:TIGR02169 620 FGDtlVVEDIEAARRLMGKYRmvtlegelfeksgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRR 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1317 WEGRQNSLESELRDLHETAASLQSRLRQAElqkMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRT 1396
Cdd:TIGR02169 700 IENRLDELSQELSDASRKIGEIEKEIEQLE---QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHK 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1397 ARSAL-----KLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAAL 1471
Cdd:TIGR02169 777 LEEALndleaRLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1472 ELLSLDLKKRSREVdlqQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELendrEAQRSVLEHQLLDLEQKAQVI 1551
Cdd:TIGR02169 857 ENLNGKKEELEEEL---EELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL----EAQIEKKRKRLSELKAKLEAL 929
|
810
....*....|....
gi 194018503 1552 ESQRGQIQDLKKQL 1565
Cdd:TIGR02169 930 EEELSEIEDPKGED 943
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
479-1192 |
6.81e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.79 E-value: 6.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 479 EVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNmELQLQGDSAQGEKLEQQEELHLAVREReRLQETLVGLEAKQS 558
Cdd:PTZ00121 1095 EAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAE-EARKAEDARKAEEARKAEDAKRVEIAR-KAEDARKAEEARKA 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 559 ESLSELLTLREALESSRLEgELLKQERVEVAAALARAEQ--SIVELSGSENSLKAEvADLRAAAVKLGAlNEALALDKVE 636
Cdd:PTZ00121 1173 EDAKKAEAARKAEEVRKAE-ELRKAEDARKAEAARKAEEerKAEEARKAEDAKKAE-AVKKAEEAKKDA-EEAKKAEEER 1249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 637 LNQQLLQLEQENQSLCSRVEA---AEQLRSALQVDLAEAERRREAL--WEKKTQLETQLQKAEEA--GAELQAELRGTRE 709
Cdd:PTZ00121 1250 NNEEIRKFEEARMAHFARRQAaikAEEARKADELKKAEEKKKADEAkkAEEKKKADEAKKKAEEAkkADEAKKKAEEAKK 1329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 710 EKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETlARAVQEKEALVRERAAlEVRLQAVERDRQDltehvlglrSAKE 789
Cdd:PTZ00121 1330 KADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK-AEAAEKKKEEAKKKAD-AAKKKAEEKKKAD---------EAKK 1398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 790 QLESNLFEAQQQNSVIQVTKGQLEVQIQtiiqAKEVIQGEvkclKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQ 869
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKK----AEEKKKAD----EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAK 1470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 870 KVaheeevNRLQEKWEKERSwlQQELDKTLETLERERAELETKLREQQTEMEAIRAqreEERSQADsalyqmQLETEKER 949
Cdd:PTZ00121 1471 KA------DEAKKKAEEAKK--ADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKA---EEAKKAD------EAKKAEEA 1533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 950 VSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQkqVED 1029
Cdd:PTZ00121 1534 KKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK--AEE 1611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1030 LMSQLVAHDDSQRLVKEEiEEKVKVAQECSRIQKELEKenaslALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQE 1109
Cdd:PTZ00121 1612 AKKAEEAKIKAEELKKAE-EEKKKVEQLKKKEAEEKKK-----AEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEE 1685
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1110 GQRElgvqvellRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPEN 1189
Cdd:PTZ00121 1686 DEKK--------AAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKK 1757
|
...
gi 194018503 1190 QAQ 1192
Cdd:PTZ00121 1758 KIA 1760
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
959-1721 |
6.92e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.71 E-value: 6.92e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 959 TQKELADASQQLERLrQDMkIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAA----FQKDKLD-LQKQVEDLMSQ 1033
Cdd:TIGR02168 177 TERKLERTRENLDRL-EDI-LNELERQLKSLERQAEKAERYKELKAELRELELALLVlrleELREELEeLQEELKEAEEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1034 LVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRE 1113
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1114 LGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRAS---LWAQEAKATQLQLQLRSTESQLEALVAEQQpenQ 1190
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELeeqLETLRSKVAQLELQIASLNNEIERLEARLE---R 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1191 AQAQLASLCSVLQQALGSACESRPElrgggdsaptlwgpdpDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQ 1270
Cdd:TIGR02168 412 LEDRRERLQQEIEELLKKLEEAELK----------------ELQAELEELEEELEELQEELERLEEALEELREELEEAEQ 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1271 ARDDLRDQVQKLVQRLTDTEAQKSQvHSELQDLQRQLSQSQEEKSKWEGR-------------------QNSLESELRDL 1331
Cdd:TIGR02168 476 ALDAAERELAQLQARLDSLERLQEN-LEGFSEGVKALLKNQSGLSGILGVlselisvdegyeaaieaalGGRLQAVVVEN 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1332 HETAASLQSRLRQAELQK-----MEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLE---------EDLRTA 1397
Cdd:TIGR02168 555 LNAAKKAIAFLKQNELGRvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSyllggvlvvDDLDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1398 rsalklkNEELESERERAQALQEQGEL----KVAQGKALQENLALLAQT--LSNREREVETLQAEVQELEKQREMQKAAL 1471
Cdd:TIGR02168 635 -------LELAKKLRPGYRIVTLDGDLvrpgGVITGGSAKTNSSILERRreIEELEEKIEELEEKIAELEKALAELRKEL 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1472 ELLSLDLKKRSREVDLQQEQIQELeqcRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVI 1551
Cdd:TIGR02168 708 EELEEELEQLRKELEELSRQISAL---RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEI 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1552 ESQRGQIQDLKKQLGTLECLALELEESHH----KVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHEL 1627
Cdd:TIGR02168 785 EELEAQIEQLKEELKALREALDELRAELTllneEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEL 864
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1628 ENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELvlqKERIQVLEDQRTLQTKIlEEDLEQIKHSLRE 1707
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKR---SELRRELEELREKLAQL-ELRLEGLEVRIDN 940
|
810
....*....|....
gi 194018503 1708 RSQELASQWQLVHE 1721
Cdd:TIGR02168 941 LQERLSEEYSLTLE 954
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
512-1069 |
2.26e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 73.25 E-value: 2.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 512 RRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQ--SESLSELLTLREALESSRLEGELLKQERVEVA 589
Cdd:PTZ00121 1277 ARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKkaEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAA 1356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 590 AALARAEQ--SIVELSGSENSLKAEVADLRAAAVKLG------ALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQL 661
Cdd:PTZ00121 1357 DEAEAAEEkaEAAEKKKEEAKKKADAAKKKAEEKKKAdeakkkAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEA 1436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 662 RSALQVDLAEAERRREAlwEKKTQLETQLQKAEEAGAELQAELRGTREEK-EELKDKLSEAHHQQETATAHLEQLHQDAE 740
Cdd:PTZ00121 1437 KKKAEEAKKADEAKKKA--EEAKKAEEAKKKAEEAKKADEAKKKAEEAKKaDEAKKKAEEAKKKADEAKKAAEAKKKADE 1514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 741 RQEETLARAVQEKEALVRERAALEVRlQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQtii 820
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAEEAKKADEAK-KAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAE--- 1590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 821 QAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEgQASLERQKVAHEEEVNRlqekwekerswlQQELDKTLE 900
Cdd:PTZ00121 1591 EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEE-KKKVEQLKKKEAEEKKK------------AEELKKAEE 1657
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 901 TLERERAELETKLREQQTEMEAIRAQREEERSQADsalyqmQLETEKERVSLLETLLRTQKELADASQQLERLRQD--MK 978
Cdd:PTZ00121 1658 ENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE------ALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEEnkIK 1731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 979 IQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLaafQKDKLDLQKQVEDLMSQLVAHDDSQRlvKEEIEEKVKVAQEC 1058
Cdd:PTZ00121 1732 AEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEE---EKKAEEIRKEKEAVIEEELDEEDEKR--RMEVDKKIKDIFDN 1806
|
570
....*....|.
gi 194018503 1059 SRIQKELEKEN 1069
Cdd:PTZ00121 1807 FANIIEGGKEG 1817
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1756-1961 |
2.72e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 72.64 E-value: 2.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1756 ERIQELQGHMGQLEqqlqGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETL 1835
Cdd:COG4913 225 EAADALVEHFDDLE----RAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1836 RQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGE-LEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEK 1914
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNGGDrLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAE 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 194018503 1915 AVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAE 1961
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAE 427
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
256-984 |
3.15e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.41 E-value: 3.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 256 EKEAHEKSQELMQLKSHgDLEKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEaslSRNAQE 335
Cdd:TIGR02169 219 EKREYEGYELLKEKEAL-ERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEE---QLRVKE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 336 EKLSLQQVIKAITQALAsvEEEDTVTQSSGHEDSLQSDCNGLsQFDPQDPDRALTLVQSVLTRRQQAVQDLRQQLSGCQE 415
Cdd:TIGR02169 295 KIGELEAEIASLERSIA--EKERELEDAEERLAKLEAEIDKL-LAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRA 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 416 AMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERD--------------ALAGQTVDLQGEVD 481
Cdd:TIGR02169 372 ELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELAdlnaaiagieakinELEEEKEDKALEIK 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 482 SLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAkqseSL 561
Cdd:TIGR02169 452 KQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHG----TV 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 562 SELLTLRE----ALESSrlEGELLKQERVEVAAALARAEQSIVELSGSE------NSLKAEVADLRAAAVKlGALNEALA 631
Cdd:TIGR02169 528 AQLGSVGEryatAIEVA--AGNRLNNVVVEDDAVAKEAIELLKRRKAGRatflplNKMRDERRDLSILSED-GVIGFAVD 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 632 LDKVELNQQLLQLEQENQSLC-SRVEAAEQL---------------RSALQVDLAEAERRRE----ALWEKKTQLETQLQ 691
Cdd:TIGR02169 605 LVEFDPKYEPAFKYVFGDTLVvEDIEAARRLmgkyrmvtlegelfeKSGAMTGGSRAPRGGIlfsrSEPAELQRLRERLE 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 692 KAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVE 771
Cdd:TIGR02169 685 GLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELE 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 772 RDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQ-IQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDA 850
Cdd:TIGR02169 765 ARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSrIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRID 844
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 851 VARQLAQAEQEgQASLERQKVAHEEEVNRLQEKWEkerswlqqELDKTLETLERERAELETKLREQQTEMEAIRAQREEE 930
Cdd:TIGR02169 845 LKEQIKSIEKE-IENLNGKKEELEEELEELEAALR--------DLESRLGDLKKERDELEAQLRELERKIEELEAQIEKK 915
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 194018503 931 RSQAdsALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRqdMKIQKLKE 984
Cdd:TIGR02169 916 RKRL--SELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQ--AELQRVEE 965
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
490-1206 |
4.88e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.02 E-value: 4.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 490 LQKARGELqqqlEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVG----LEAKQSESLSELL 565
Cdd:TIGR02169 172 KEKALEEL----EEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKekeaLERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 566 TLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSEN--------SLKAEVADLRAAAVKLGALNEALALDKVEL 637
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlrvkekigELEAEIASLERSIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 638 NQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDK 717
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 718 LSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFE 797
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 798 AQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLkLELDAERTRAEQEW-------------------DAVAR---QL 855
Cdd:TIGR02169 488 LQRELAEAEAQARASEERVRGGRAVEEVLKASIQGV-HGTVAQLGSVGERYataievaagnrlnnvvvedDAVAKeaiEL 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 856 AQAEQEGQAS---LERQKVAHEE--------------EVNRLQEKWEKERSWLQQ--------ELDKTL----------- 899
Cdd:TIGR02169 567 LKRRKAGRATflpLNKMRDERRDlsilsedgvigfavDLVEFDPKYEPAFKYVFGdtlvvediEAARRLmgkyrmvtleg 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 900 ETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLL-RTQKELADASQQLERLRQDMK 978
Cdd:TIGR02169 647 ELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLdELSQELSDASRKIGEIEKEIE 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 979 iQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLvaHDDSQRLVKEEIEEKVKVAQec 1058
Cdd:TIGR02169 727 -QLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEAL--NDLEARLSHSRIPEIQAELS-- 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1059 sriqkELEKENASLALSLVEKEKRLlilqeadSVRQQELSSLRQDIQEAQEGQRELgvqvELLRQEVKEKEADFVAREAQ 1138
Cdd:TIGR02169 802 -----KLEEEVSRIEARLREIEQKL-------NRLTLEKEYLEKEIQELQEQRIDL----KEQIKSIEKEIENLNGKKEE 865
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194018503 1139 LLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQAL 1206
Cdd:TIGR02169 866 LEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEEL 933
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1393-1911 |
5.17e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 71.61 E-value: 5.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1393 DLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQ-------TLSNREREVETLQAEVQELEKQRE 1465
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAeiedlreTIAETEREREELAEEVRDLRERLE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1466 MQKAALE--LLSLDLKKRSREV--DLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQL 1541
Cdd:PRK02224 290 ELEEERDdlLAEAGLDDADAEAveARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1542 LDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKMITE----LEGQREMQRVALTHLTLDLEERSQEL 1617
Cdd:PRK02224 370 SELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREerdeLREREAELEATLRTARERVEEAEALL 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1618 QAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERkGQELVLQKERIQVLEDQRTLQTKILEED 1697
Cdd:PRK02224 450 EAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLER-AEDLVEAEDRIERLEERREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1698 LEQIKH------SLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVEcQQERIQELQGHMGQLEQQ 1771
Cdd:PRK02224 529 RETIEEkreraeELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIE-SLERIRTLLAAIADAEDE 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1772 LQGLHRKVGETSLLLTHReqetatlQQHLQEAKEQ-GELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMK 1850
Cdd:PRK02224 608 IERLREKREALAELNDER-------RERLAEKRERkRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQ 680
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 194018503 1851 LKTSALQAALEQAhATLKERQGELEEHREQVRRLQEElevegrqVRALEEVLGDLRAESRE 1911
Cdd:PRK02224 681 AEIGAVENELEEL-EELRERREALENRVEALEALYDE-------AEELESMYGDLRAELRQ 733
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1276-1844 |
5.63e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 71.61 E-value: 5.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1276 RDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRqaelqkmEAQND 1355
Cdd:PRK02224 229 REQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERD-------DLLAE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1356 RELLQASKEKLSAQVEHLQAcvaeaqaqadAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGelkvaqgKALQEN 1435
Cdd:PRK02224 302 AGLDDADAEAVEARREELED----------RDEELRDRLEECRVAAQAHNEEAESLREDADDLEERA-------EELREE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1436 LALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQqeqiqeleqcRSVLEHLPMAVQEREQK 1515
Cdd:PRK02224 365 AAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEEL----------REERDELREREAELEAT 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1516 LSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKMITELEGQ 1595
Cdd:PRK02224 435 LRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1596 REmQRVALTHLtldLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQkqqeQLAQALERKGQELvl 1675
Cdd:PRK02224 515 EE-RREDLEEL---IAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAR----EEVAELNSKLAEL-- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1676 qKERIQVLEDQRTLQTKIleEDLEQIKHSLRERSQELASQWQLVHERADDGKSpskgqrgslehlklilRDKEKEVECQQ 1755
Cdd:PRK02224 585 -KERIESLERIRTLLAAI--ADAEDEIERLREKREALAELNDERRERLAEKRE----------------RKRELEAEFDE 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1756 ERIQELQGHMGQLEQQLQGLHRKvgetsllLTHREQETATLQQHLQEAKEQGELREqvlqgQLEEAQRDLAQRDHELETL 1835
Cdd:PRK02224 646 ARIEEAREDKERAEEYLEQVEEK-------LDELREERDDLQAEIGAVENELEELE-----ELRERREALENRVEALEAL 713
|
....*....
gi 194018503 1836 RQEKQQTQD 1844
Cdd:PRK02224 714 YDEAEELES 722
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
396-950 |
5.91e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 71.48 E-value: 5.91e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 396 LTRRQQAVQDLRQQLSGCQEAMS-----FLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALA 470
Cdd:COG4913 257 IRELAERYAAARERLAELEYLRAalrlwFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNG 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 471 GQTVD-LQGEVDSLSRERELLQKARGELQQQLEVL-------EQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAV-- 540
Cdd:COG4913 337 GDRLEqLEREIERLERELEERERRRARLEALLAALglplpasAEEFAALRAEAAALLEALEEELEALEEALAEAEAALrd 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 541 --RERERLQETLVGLEAKQSESLSELLTLREALESS--------RLEGELLkqervEVAAALARAEQSI-VELSGSENSL 609
Cdd:COG4913 417 lrRELRELEAEIASLERRKSNIPARLLALRDALAEAlgldeaelPFVGELI-----EVRPEEERWRGAIeRVLGGFALTL 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 610 KAEVADLRAAAVKLGALNEALALD--KVELNQQLLQLEQ-ENQSLCSRVEAAE------------QLRSALQVDLAEAER 674
Cdd:COG4913 492 LVPPEHYAAALRWVNRLHLRGRLVyeRVRTGLPDPERPRlDPDSLAGKLDFKPhpfrawleaelgRRFDYVCVDSPEELR 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 675 R-------------REALWEKKTQLETQLQ-----KAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLH 736
Cdd:COG4913 572 RhpraitragqvkgNGTRHEKDDRRRIRSRyvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQ 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 737 QDAERQEETLARAvqekeALVRERAALEVRLQAVERDRQDLTEhvlgLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQI 816
Cdd:COG4913 652 RLAEYSWDEIDVA-----SAEREIAELEAELERLDASSDDLAA----LEEQLEELEAELEELEEELDELKGEIGRLEKEL 722
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 817 QTI------IQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSW 890
Cdd:COG4913 723 EQAeeeldeLQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPA 802
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 891 LQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERV 950
Cdd:COG4913 803 ETADLDADLESLPEYLALLDRLEEDGLPEYEERFKELLNENSIEFVADLLSKLRRAIREI 862
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
528-1050 |
9.36e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 70.84 E-value: 9.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 528 EKLEQQEELHLAVRERER--LQETLVGLEAKQSESLSELLTL----------REALESSRLEGELLKQERVEVAAALARA 595
Cdd:PRK02224 184 DQRGSLDQLKAQIEEKEEkdLHERLNGLESELAELDEEIERYeeqreqaretRDEADEVLEEHEERREELETLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 596 EQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERR 675
Cdd:PRK02224 264 RETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 676 REALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEA 755
Cdd:PRK02224 344 AESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDE 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 756 LVRERAALEVRLQAVERDRQDLTEhvlglrsakeqlesnLFEAQQQNSVIQVTKGQLEVqiQTIIQAKEVIQgevkclkl 835
Cdd:PRK02224 424 LREREAELEATLRTARERVEEAEA---------------LLEAGKCPECGQPVEGSPHV--ETIEEDRERVE-------- 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 836 ELDAERTRAEQEWDAVARQLAQAEQegQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKtLETLERERAELETKLRE 915
Cdd:PRK02224 479 ELEAELEDLEEEVEEVEERLERAED--LVEAEDRIERLEERREDLEELIAERRETIEEKRER-AEELRERAAELEAEAEE 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 916 QQTEMEAIRAQREEERSQADSalYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAqL 995
Cdd:PRK02224 556 KREAAAEAEEEAEEAREEVAE--LNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAE-K 632
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 996 QETQQELKEAAQQHRDDLAAFQKDKL-DLQKQVEDLMSQLVAHDDSQR----LVKEEIEE 1050
Cdd:PRK02224 633 RERKRELEAEFDEARIEEAREDKERAeEYLEQVEEKLDELREERDDLQaeigAVENELEE 692
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
505-1129 |
2.14e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.17 E-value: 2.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 505 EQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQE 584
Cdd:PTZ00121 1239 AEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKAD 1318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 585 RVEVAAALARAEQSIVELSGSENSLKAEVA--DLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSlCSRVEAAEQLR 662
Cdd:PTZ00121 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAkaEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKK-AEEKKKADEAK 1397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 663 SALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAElqaELRGTREEK---EELKDKLSEAHHQQEtatahLEQLHQDA 739
Cdd:PTZ00121 1398 KKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD---EAKKKAEEAkkaDEAKKKAEEAKKAEE-----AKKKAEEA 1469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 740 ERQEETLARAVQEKEALVRERAALEVRLQAVE-RDRQDLTEHVLGLRSAKEQLESN-LFEAQQQNSVIQVTKGQLEVQIQ 817
Cdd:PTZ00121 1470 KKADEAKKKAEEAKKADEAKKKAEEAKKKADEaKKAAEAKKKADEAKKAEEAKKADeAKKAEEAKKADEAKKAEEKKKAD 1549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 818 TIIQAKEVIQGEVKcLKLEldaERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEK-ERSWLQQELD 896
Cdd:PTZ00121 1550 ELKKAEELKKAEEK-KKAE---EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKaEEAKIKAEEL 1625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 897 KTLETLERERAELETKLREQQTEMEAIRaqREEERSQADSALYQMQLETEKERVsllETLLRTQKELADASQQLERLRQD 976
Cdd:PTZ00121 1626 KKAEEEKKKVEQLKKKEAEEKKKAEELK--KAEEENKIKAAEEAKKAEEDKKKA---EEAKKAEEDEKKAAEALKKEAEE 1700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 977 M-KIQKLKEQEttgmlqAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLmsqlvahddsqrlvKEEIEEKVKVA 1055
Cdd:PTZ00121 1701 AkKAEELKKKE------AEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEA--------------KKDEEEKKKIA 1760
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194018503 1056 QECSRIQKELEKenaslalslVEKEKRLLI---LQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKE 1129
Cdd:PTZ00121 1761 HLKKEEEKKAEE---------IRKEKEAVIeeeLDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEME 1828
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
836-1684 |
3.70e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.94 E-value: 3.70e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 836 ELDAERTRAEQEWDAVARQLAQAEQ-EGQASLERQKVAHE-EEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKL 913
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLiIDEKRQQLERLRRErEKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 914 REQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRqdmKIQKLKEQEttgmlQA 993
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLE---RSIAEKERE-----LE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 994 QLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLA 1073
Cdd:TIGR02169 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1074 LSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEadfvareaQLLEELEASRVAEQQl 1153
Cdd:TIGR02169 399 REINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE--------WKLEQLAADLSKYEQ- 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1154 raSLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQA----------LGSACESRP---ELRGGG 1220
Cdd:TIGR02169 470 --ELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASiqgvhgtvaqLGSVGERYAtaiEVAAGN 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1221 DSAPTLWGPDPDQNGASRLFKRWSLPtalspEAVALALQKLHQdvwKARQARDDLRDQVQKLVQRLTDTEAQ-KSQVHSE 1299
Cdd:TIGR02169 548 RLNNVVVEDDAVAKEAIELLKRRKAG-----RATFLPLNKMRD---ERRDLSILSEDGVIGFAVDLVEFDPKyEPAFKYV 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1300 LQDlqRQLSQSQEEKSKWEG--RQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACV 1377
Cdd:TIGR02169 620 FGD--TLVVEDIEAARRLMGkyRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSEL 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1378 AEaqaqadaaavLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEV 1457
Cdd:TIGR02169 698 RR----------IENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARI 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1458 QELEKQREMQKAALELL--SLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDR---EA 1532
Cdd:TIGR02169 768 EELEEDLHKLEEALNDLeaRLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRidlKE 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1533 QRSVLEHQL----LDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEEshhKVESQQKMITELEGQREMQRVALTHLTL 1608
Cdd:TIGR02169 848 QIKSIEKEIenlnGKKEELEEELEELEAALRDLESRLGDLKKERDELEA---QLRELERKIEELEAQIEKKRKRLSELKA 924
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1609 DLEERSQELQAQSSQLHELENHSTHLAKE--LQERDQEVTSQRQQIDE-----LQKQQEQLAQALERKGQELVLQKERIQ 1681
Cdd:TIGR02169 925 KLEALEEELSEIEDPKGEDEEIPEEELSLedVQAELQRVEEEIRALEPvnmlaIQEYEEVLKRLDELKEKRAKLEEERKA 1004
|
...
gi 194018503 1682 VLE 1684
Cdd:TIGR02169 1005 ILE 1007
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1273-2064 |
8.25e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 67.79 E-value: 8.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1273 DDLRDQVQK-----LVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHEtaaslqsrlrqael 1347
Cdd:TIGR02169 214 QALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNK-------------- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1348 qKMEAQNDRELLQASKE--KLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQgelk 1425
Cdd:TIGR02169 280 -KIKDLGEEEQLRVKEKigELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDK---- 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1426 vaqgkalqenlalLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQcrsVLEHL 1505
Cdd:TIGR02169 355 -------------LTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQE---ELQRL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1506 PMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQ 1585
Cdd:TIGR02169 419 SEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQ 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1586 QKMITELEGQREMQRvalthltLDLEERSQELQAQSSQLHEL-ENHSTHLAKELQERDQEVTSQRqqiDELQKQQEQLAQ 1664
Cdd:TIGR02169 499 ARASEERVRGGRAVE-------EVLKASIQGVHGTVAQLGSVgERYATAIEVAAGNRLNNVVVED---DAVAKEAIELLK 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1665 AlERKGQELVLQKERIQvleDQRTLQTKILEEDLEQIKHSLRERSQELAS------QWQLVHERADDGKSPSKGQR---- 1734
Cdd:TIGR02169 569 R-RKAGRATFLPLNKMR---DERRDLSILSEDGVIGFAVDLVEFDPKYEPafkyvfGDTLVVEDIEAARRLMGKYRmvtl 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1735 -------------GSLEHLKLILRDKEKEVECQQ--ERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQH 1799
Cdd:TIGR02169 645 egelfeksgamtgGSRAPRGGILFSRSEPAELQRlrERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKE 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1800 LQEAKEQgelrEQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ-----AHATLKERQGEL 1874
Cdd:TIGR02169 725 IEQLEQE----EEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlearlSHSRIPEIQAEL 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1875 EEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHE---AEARTLQDSWLQAQATLTEQ 1951
Cdd:TIGR02169 801 SKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEnlnGKKEELEEELEELEAALRDL 880
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1952 EQELAAL-----RAENQYS--RRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALqATLDTCQAS 2024
Cdd:TIGR02169 881 ESRLGDLkkerdELEAQLRelERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE-LSLEDVQAE 959
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 194018503 2025 ARQLEEALRiREGEIQAQALQHHEVTQHLQQELCQKKEEL 2064
Cdd:TIGR02169 960 LQRVEEEIR-ALEPVNMLAIQEYEEVLKRLDELKEKRAKL 998
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1784-2227 |
1.21e-10 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 67.28 E-value: 1.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1784 LLLTHREQETATLQQHLQEAKEQGELREQVlqGQLEEAQRDLAQ-----RDHEleTLRQEKQQTQDQEESMKLKTSALQA 1858
Cdd:COG3096 286 RALELRRELFGARRQLAEEQYRLVEMAREL--EELSARESDLEQdyqaaSDHL--NLVQTALRQQEKIERYQEDLEELTE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1859 ALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAEsrehekavlALQQRCAEQAQEheaeartlq 1938
Cdd:COG3096 362 RLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTR---------AIQYQQAVQALE--------- 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1939 dswlQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATl 2018
Cdd:COG3096 424 ----KARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWQTAR- 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2019 dtcqasarqleEALRiREGEIQAQALQhhevTQHLQQELcqkkEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRL 2098
Cdd:COG3096 499 -----------ELLR-RYRSQQALAQR----LQQLRAQL----AELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEEL 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2099 LESLKelqltvAQREEEILMLREASSPRHRAlpaekpalqplpaQQELERLQTALRQTEAREIEWREKAQDLALSLAQSK 2178
Cdd:COG3096 559 LAELE------AQLEELEEQAAEAVEQRSEL-------------RQQLEQLRARIKELAARAPAWLAAQDALERLREQSG 619
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 194018503 2179 ASISSLQEITMFLQaSVLERESEQQRLQEELVLSRQALEEQ-----QSGGPHST 2227
Cdd:COG3096 620 EALADSQEVTAAMQ-QLLEREREATVERDELAARKQALESQierlsQPGGAEDP 672
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
534-1132 |
5.41e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 65.32 E-value: 5.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 534 EELHLAVRERERLQETLVGLEA------KQSESLSELLTLREALES--SRLEGELLKQERVEVAAALARAEQSIVELSGS 605
Cdd:COG4913 238 ERAHEALEDAREQIELLEPIRElaeryaAARERLAELEYLRAALRLwfAQRRLELLEAELEELRAELARLEAELERLEAR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 606 ENSLKAEVADLRAAAVKLGAlnealaldkvelnqqllqleqenqslcSRVEAAEQLRSALQVDLAEAERRREALWEKKTQ 685
Cdd:COG4913 318 LDALREELDELEAQIRGNGG---------------------------DRLEQLEREIERLERELEERERRRARLEALLAA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 686 LETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETAtahleqlHQDAERQEETLAravQEKEALVRERAALEV 765
Cdd:COG4913 371 LGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAA-------LRDLRRELRELE---AEIASLERRKSNIPA 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 766 RLQAVerdRQDLTEHvLGLRSAK-----EQLESNLFEAQQQNSVIQVTKGQ---LEVQIQTIIQAKEVIQGEVKCLKLEL 837
Cdd:COG4913 441 RLLAL---RDALAEA-LGLDEAElpfvgELIEVRPEEERWRGAIERVLGGFaltLLVPPEHYAAALRWVNRLHLRGRLVY 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 838 DAERTRAEQEW------DAVARQLAQAEQEGQASLERQ--------KVAHEEEVNRLQ--------------------EK 883
Cdd:COG4913 517 ERVRTGLPDPErprldpDSLAGKLDFKPHPFRAWLEAElgrrfdyvCVDSPEELRRHPraitragqvkgngtrhekddRR 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 884 WEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADsaLYQMQLETEKERVSLLEtllrTQKEL 963
Cdd:COG4913 597 RIRSRYVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERRE--ALQRLAEYSWDEIDVAS----AEREI 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 964 ADASQQLERLRQDM-KIQKLKEQETTgmLQAQLQETQQELKEAaqqhRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQR 1042
Cdd:COG4913 671 AELEAELERLDASSdDLAALEEQLEE--LEAELEELEEELDEL----KGEIGRLEKELEQAEEELDELQDRLEAAEDLAR 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1043 L-VKEEIEEKVKVAQEC---SRIQKELEKENASLALSLVEKEKRLL-ILQEADSVRQQELSSLRQDIQEAQEGQRELGvq 1117
Cdd:COG4913 745 LeLRALLEERFAAALGDaveRELRENLEERIDALRARLNRAEEELErAMRAFNREWPAETADLDADLESLPEYLALLD-- 822
|
650
....*....|....*
gi 194018503 1118 vELLRQEVKEKEADF 1132
Cdd:COG4913 823 -RLEEDGLPEYEERF 836
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
434-1072 |
1.28e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.93 E-value: 1.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 434 LREKLQKLTGERDAL----AGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLE----VLE 505
Cdd:TIGR02169 196 KRQQLERLRREREKAeryqALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEeieqLLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 506 QEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAV----RERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELL 581
Cdd:TIGR02169 276 ELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIaekeRELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKL 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 582 KQERVEVAAALARAEQSIVELSGSENSLKAEVADLRaaaVKLGALNEALAldkvELNQQLLQLEQENQSLCSRVEAAEQL 661
Cdd:TIGR02169 356 TEEYAELKEELEDLRAELEEVDKEFAETRDELKDYR---EKLEKLKREIN----ELKRELDRLQEELQRLSEELADLNAA 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 662 RSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQ---D 738
Cdd:TIGR02169 429 IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEErvrG 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 739 AERQEETLARAVQEKEALVRE--------RAALEV----RLQAV--------ERDRQDLTEHVLG---------LRSAKE 789
Cdd:TIGR02169 509 GRAVEEVLKASIQGVHGTVAQlgsvgeryATAIEVaagnRLNNVvveddavaKEAIELLKRRKAGratflplnkMRDERR 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 790 QLESNL-------------FEAQQQNSVIQV------------------------------------TKGQLEVQIQTII 820
Cdd:TIGR02169 589 DLSILSedgvigfavdlveFDPKYEPAFKYVfgdtlvvedieaarrlmgkyrmvtlegelfeksgamTGGSRAPRGGILF 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 821 QAKE-----VIQGEVKCLKLELD---AERTRAEQEWDAvARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQ 892
Cdd:TIGR02169 669 SRSEpaelqRLRERLEGLKRELSslqSELRRIENRLDE-LSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 893 qELDKTLETLERERAELETKLREQQTEMEAIRAQREE-ERSQADSALYQMQLET---EKERVSLLETLLRTQKELA---- 964
Cdd:TIGR02169 748 -SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlEARLSHSRIPEIQAELsklEEEVSRIEARLREIEQKLNrltl 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 965 ------DASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDdlaaFQKDKLDLQKQVEDLMSQLVAHD 1038
Cdd:TIGR02169 827 ekeyleKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRD----LESRLGDLKKERDELEAQLRELE 902
|
730 740 750
....*....|....*....|....*....|....
gi 194018503 1039 DSQRLVKEEIEEKVKVAQECSRIQKELEKENASL 1072
Cdd:TIGR02169 903 RKIEELEAQIEKKRKRLSELKAKLEALEEELSEI 936
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
716-1191 |
1.37e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.78 E-value: 1.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 716 DKLSEAHHQQETATAHLEQLhQDAERQEETLARAVQEKEALVRERAALevRLQAVERDRQDLTEHVLGLRSAKEQLESNL 795
Cdd:COG4913 235 DDLERAHEALEDAREQIELL-EPIRELAERYAAARERLAELEYLRAAL--RLWFAQRRLELLEAELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 796 FEAQQQNSVIQVTKGQLEVQIQTI-IQAKEVIQGEVKCLKLELDaERTRAEQEWDAVARQLAQAEQEGQASLERQKvahe 874
Cdd:COG4913 312 ERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELE-ERERRRARLEALLAALGLPLPASAEEFAALR---- 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 875 EEVNRLQEKWEKERSWLQQELDKT---LETLERERAELETKLREQQT-------EMEAIRAQREEERSQADSALY----- 939
Cdd:COG4913 387 AEAAALLEALEEELEALEEALAEAeaaLRDLRRELRELEAEIASLERrksnipaRLLALRDALAEALGLDEAELPfvgel 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 940 -QMQLETEK-----ERV------SLL------------------ETLLRTQK-ELADASQQLERLRQDMKIQKL--KEQE 986
Cdd:COG4913 467 iEVRPEEERwrgaiERVlggfalTLLvppehyaaalrwvnrlhlRGRLVYERvRTGLPDPERPRLDPDSLAGKLdfKPHP 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 987 TTGMLQAQLQ--------ETQQELKEAAQ------QHRDDLAAFQKD-----------------KLD-LQKQVEDLMSQL 1034
Cdd:COG4913 547 FRAWLEAELGrrfdyvcvDSPEELRRHPRaitragQVKGNGTRHEKDdrrrirsryvlgfdnraKLAaLEAELAELEEEL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1035 VAHDDSQRLVKEEIEEKVKVAQECSRIQK--ELEKENASLALSLVEKEKRLLILQEADSV---RQQELSSLRQDIQEAQE 1109
Cdd:COG4913 627 AEAEERLEALEAELDALQERREALQRLAEysWDEIDVASAEREIAELEAELERLDASSDDlaaLEEQLEELEAELEELEE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1110 GQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPEN 1189
Cdd:COG4913 707 ELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAE 786
|
..
gi 194018503 1190 QA 1191
Cdd:COG4913 787 EE 788
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
670-1395 |
4.18e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.47 E-value: 4.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 670 AEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEEtlARA 749
Cdd:PTZ00121 1094 EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEE--ARK 1171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 750 VQEKEALVRERAALEVRLQAVERDRQDltehvlgLRSAKEQLesnlfEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGE 829
Cdd:PTZ00121 1172 AEDAKKAEAARKAEEVRKAEELRKAED-------ARKAEAAR-----KAEEERKAEEARKAEDAKKAEAVKKAEEAKKDA 1239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 830 VKCLKLEldAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHE----EEVNRLQEKWEKERSWLQQELDKTLETlERE 905
Cdd:PTZ00121 1240 EEAKKAE--EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADElkkaEEKKKADEAKKAEEKKKADEAKKKAEE-AKK 1316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 906 RAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSlletllRTQKELADASQQLERLRQDMKIQKLKEQ 985
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA------EEKAEAAEKKKEEAKKKADAAKKKAEEK 1390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 986 ETTGMLQAQLQETQQELKEAAQQhrddlAAFQKDKLDLQKQVEDLMSqlvahddsqrlvKEEIEEKVKVAQECSRIQKEL 1065
Cdd:PTZ00121 1391 KKADEAKKKAEEDKKKADELKKA-----AAAKKKADEAKKKAEEKKK------------ADEAKKKAEEAKKADEAKKKA 1453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1066 EKENASLALSLVEKEKRllilqEADSVRQQELSSLRQDiqEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEA 1145
Cdd:PTZ00121 1454 EEAKKAEEAKKKAEEAK-----KADEAKKKAEEAKKAD--EAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADE 1526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1146 SRVAEQQLRASlWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPELRGGGDSAPT 1225
Cdd:PTZ00121 1527 AKKAEEAKKAD-EAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEK 1605
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1226 LWGPDPDQNGASRLFKRWSLPTALS-PEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQV------HS 1298
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKKAEEeKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAeeakkaEE 1685
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1299 ELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDR----ELLQASKEKLSAQVEHLQ 1374
Cdd:PTZ00121 1686 DEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKkkaeEAKKDEEEKKKIAHLKKE 1765
|
730 740
....*....|....*....|.
gi 194018503 1375 ACVAEAQAQADAAAVLEEDLR 1395
Cdd:PTZ00121 1766 EEKKAEEIRKEKEAVIEEELD 1786
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1873-2067 |
6.82e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.47 E-value: 6.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1873 ELEEHREQVRRLQEELEVEGRQVRALEEVLGD------LRAESREHEKAVLALQQRCAEQAQEH-EAEARTLQDSWLQAQ 1945
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIELLEPIRELaeryaaARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1946 ATLTEQEQELAALRAE-NQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQAS 2024
Cdd:COG4913 309 AELERLEARLDALREElDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAE 388
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 194018503 2025 ARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQL 2067
Cdd:COG4913 389 AAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1258-2027 |
7.99e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.24 E-value: 7.99e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1258 LQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLhetaas 1337
Cdd:TIGR02169 296 IGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDL------ 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1338 lqsrlrQAELQKMEAQNdrellQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQA 1417
Cdd:TIGR02169 370 ------RAELEEVDKEF-----AETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1418 LQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKqrEMQKAALELLSLDLKKR---SREVDLQQEQIQE 1494
Cdd:TIGR02169 439 LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEK--ELSKLQRELAEAEAQARaseERVRGGRAVEEVL 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1495 LEQCRSVLEHLPMAVQEREQKLSV------QRDQIRELENDREAQRSVlehQLLDLEQKAQVIESQRGQIQDLKKQLGtL 1568
Cdd:TIGR02169 517 KASIQGVHGTVAQLGSVGERYATAievaagNRLNNVVVEDDAVAKEAI---ELLKRRKAGRATFLPLNKMRDERRDLS-I 592
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1569 ECLALELEESHHKVESQQK-------------MITELE-GQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHST-- 1632
Cdd:TIGR02169 593 LSEDGVIGFAVDLVEFDPKyepafkyvfgdtlVVEDIEaARRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRse 672
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1633 -----HLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELV-LQKERIQVLEDQRTLQtkileEDLEQIKHSLR 1706
Cdd:TIGR02169 673 paelqRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGeIEKEIEQLEQEEEKLK-----ERLEELEEDLS 747
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1707 ERSQELAsqwqlvheraddgkspskgqrgslehlklilrDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVgetslll 1786
Cdd:TIGR02169 748 SLEQEIE--------------------------------NVKSELKELEARIEELEEDLHKLEEALNDLEARL------- 788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1787 thREQETATLQQHLQEAKEQgelrEQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHAT 1866
Cdd:TIGR02169 789 --SHSRIPEIQAELSKLEEE----VSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGK 862
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1867 LKERQGELEEHREQVRRLQEElevegrqvraleevLGDLRAESREHEKAVLALQQRcaEQAQEHEAEARTLQDSWLQAQA 1946
Cdd:TIGR02169 863 KEELEEELEELEAALRDLESR--------------LGDLKKERDELEAQLRELERK--IEELEAQIEKKRKRLSELKAKL 926
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1947 -TLTEQEQELAALRAENQYSRRQE---EAAVSQAEALQEALSKAQ----AALQEKEQSLLEQAELS---HTLEASTAALQ 2015
Cdd:TIGR02169 927 eALEEELSEIEDPKGEDEEIPEEElslEDVQAELQRVEEEIRALEpvnmLAIQEYEEVLKRLDELKekrAKLEEERKAIL 1006
|
810
....*....|..
gi 194018503 2016 ATLDTCQASARQ 2027
Cdd:TIGR02169 1007 ERIEEYEKKKRE 1018
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1817-2043 |
8.51e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.16 E-value: 8.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1817 QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVR 1896
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1897 ALEEVLGDLRAE---SREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAV 1973
Cdd:COG4942 101 AQKEELAELLRAlyrLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1974 SQAEALQEALSKAQAalqekeqsllEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQA 2043
Cdd:COG4942 181 AELEEERAALEALKA----------ERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
401-1110 |
9.08e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.08 E-value: 9.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 401 QAVQDLRQQLSGCQEAMSFLQQQHDQWEEEgRALREKLQKLTGERDALAGQTVGLQGEVDSLtgERDALAGQTVDLQGEV 480
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLEPI-RELAERYAAARERLAELEYLRAALRLWFAQR--RLELLEAELEELRAEL 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 481 DSLSRERELLQKARGELQQQLEVLEQEAWrlrrmnmelQLQGD---SAQGEKLEQQEELHLAVRERERLQETLVGLEAKQ 557
Cdd:COG4913 305 ARLEAELERLEARLDALREELDELEAQIR---------GNGGDrleQLEREIERLERELEERERRRARLEALLAALGLPL 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 558 SESLSELLTLREALESSRlegELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKL--------GALNEA 629
Cdd:COG4913 376 PASAEEFAALRAEAAALL---EALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIparllalrDALAEA 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 630 LALDKVELNQqllqleqenqsLCSRVE----------AAEQL----RSALQVDLAEAERRREALWEKKTQLETQLQKAEE 695
Cdd:COG4913 453 LGLDEAELPF-----------VGELIEvrpeeerwrgAIERVlggfALTLLVPPEHYAAALRWVNRLHLRGRLVYERVRT 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 696 AGAELQAElrgtREEKEELKDKLS-EAHHQQETATAHLEQLHQ----DAERQEETLARAVQeKEALVRERAalevRLQAV 770
Cdd:COG4913 522 GLPDPERP----RLDPDSLAGKLDfKPHPFRAWLEAELGRRFDyvcvDSPEELRRHPRAIT-RAGQVKGNG----TRHEK 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 771 ERDRQDLTEHVLGL--RSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEvkclkleldAERTRAEQEW 848
Cdd:COG4913 593 DDRRRIRSRYVLGFdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRL---------AEYSWDEIDV 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 849 DAVARQLAQAEQEgQASLErqkvAHEEEVNRLQEKWEkerswlqqELDKTLETLERERAELETKLREQQTEMEAIRAQRE 928
Cdd:COG4913 664 ASAEREIAELEAE-LERLD----ASSDDLAALEEQLE--------ELEAELEELEEELDELKGEIGRLEKELEQAEEELD 730
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 929 EERSQADSAlyqmQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQ 1008
Cdd:COG4913 731 ELQDRLEAA----EDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETAD 806
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1009 HRDDLAAFQkDKLDLQKQVEDlmSQLVAH-DDSQRLVKEEIEEKV-----KVAQECSRIQKELEKENASLALSLVEKEKR 1082
Cdd:COG4913 807 LDADLESLP-EYLALLDRLEE--DGLPEYeERFKELLNENSIEFVadllsKLRRAIREIKERIDPLNDSLKRIPFGPGRY 883
|
730 740
....*....|....*....|....*...
gi 194018503 1083 LLIlqEADSVRQQELSSLRQDIQEAQEG 1110
Cdd:COG4913 884 LRL--EARPRPDPEVREFRQELRAVTSG 909
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1817-2121 |
1.03e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.84 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1817 QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKlKTSALQAALEQAHATL-----KERQGELEEHREQVRRLQEELEVE 1891
Cdd:TIGR02168 180 KLERTRENLDRLEDILNELERQLKSLERQAEKAE-RYKELKAELRELELALlvlrlEELREELEELQEELKEAEEELEEL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1892 GRQVRALEEVLGDLRAESREHEKAVLALQQRcaeqAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEA 1971
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKE----LYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1972 AVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQ 2051
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2052 HLQQELCQKKEELRQLLEKAGARRSQEngIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLRE 2121
Cdd:TIGR02168 415 RRERLQQEIEELLKKLEEAELKELQAE--LEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
196-777 |
1.10e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 1.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 196 ATDRDLTELKAEHARLSGSLLTCCLRLTLRAQSRESSGSGRTE-ESEPARLLLLVAKTQALEKEAHEKSQELMQLKSHGD 274
Cdd:COG1196 250 ELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYElLAELARLEQDIARLEERRRELEERLEELEEELAELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 275 LEKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEASLSRNAQEEKLSLQQVIKAITQAlasv 354
Cdd:COG1196 330 EELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEEL---- 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 355 eeedtvtqssghedslqsdcnglsqfdpqdpdraltlvqsvltrrQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRAL 434
Cdd:COG1196 406 ---------------------------------------------EEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 435 REKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRM 514
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 515 NMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALAR 594
Cdd:COG1196 521 GLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAA 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 595 AEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLcSRVEAAEQLRSALQVDLAEAER 674
Cdd:COG1196 601 VDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGS-AGGSLTGGSRRELLAALLEAEA 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 675 RREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETAtahLEQLHQDAERQEETLARAVQEKE 754
Cdd:COG1196 680 ELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE---REELLEELLEEEELLEEEALEEL 756
|
570 580
....*....|....*....|...
gi 194018503 755 ALVRERAALEVRLQAVERDRQDL 777
Cdd:COG1196 757 PEPPDLEELERELERLEREIEAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
976-1895 |
1.14e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.85 E-value: 1.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 976 DMKIQKLKEQ-----ETTGMLQAQLQETQQELkEAAQQHRDDLAAFQKDKLDLQK-QVEDLMSQLVAHDDSQRLVKEEIE 1049
Cdd:TIGR02169 169 DRKKEKALEEleeveENIERLDLIIDEKRQQL-ERLRREREKAERYQALLKEKREyEGYELLKEKEALERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1050 EKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRqqelssLRQDIQEAQEGQRELGVQVELLRQEVKEKE 1129
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR------VKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1130 AdfvaREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSA 1209
Cdd:TIGR02169 322 E----RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1210 CESRPELRGGGDsaptlwgpdpdqngasRLFKRwslptalspeavalaLQKLHQDVWKARQARDDLRDQVQKLVQRLTDT 1289
Cdd:TIGR02169 398 KREINELKRELD----------------RLQEE---------------LQRLSEELADLNAAIAGIEAKINELEEEKEDK 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1290 EAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQ 1369
Cdd:TIGR02169 447 ALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGT 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1370 VEHL-------QACVAEAQAQADAAAVLEEDLRTARSALKLKNE-----------ELESERERAQALQEQGELKVAQgka 1431
Cdd:TIGR02169 527 VAQLgsvgeryATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRkagratflplnKMRDERRDLSILSEDGVIGFAV--- 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1432 lqeNLALLAQTLSNREREVETLQAEVQELEKQRE-MQKAALELLSLDLKKRSREVDLQQEQIQELEQcrsvlehlpMAVQ 1510
Cdd:TIGR02169 604 ---DLVEFDPKYEPAFKYVFGDTLVVEDIEAARRlMGKYRMVTLEGELFEKSGAMTGGSRAPRGGIL---------FSRS 671
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1511 EREQKLSVqRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLgtlECLALELEESHHKVESQQKMIT 1590
Cdd:TIGR02169 672 EPAELQRL-RERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEI---EQLEQEEEKLKERLEELEEDLS 747
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1591 ELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHlaKELQERDQEVTSQRQQIDELQKQQEQLAQALERKG 1670
Cdd:TIGR02169 748 SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSH--SRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLT 825
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1671 QELVLQKERIQVLEDQRtlqtkileEDLEQIKHSLRERSQELasqwqlvheraddgkspskgqRGSLEHLKLILRDKEKE 1750
Cdd:TIGR02169 826 LEKEYLEKEIQELQEQR--------IDLKEQIKSIEKEIENL---------------------NGKKEELEEELEELEAA 876
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1751 VECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDh 1830
Cdd:TIGR02169 877 LRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLED- 955
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 1831 eLETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQV 1895
Cdd:TIGR02169 956 -VQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
523-1192 |
1.79e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.54 E-value: 1.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 523 DSAQGEKLEQQEELHLAVRERE--RLQETLVGLEA-KQSESLSELLTLREALESSRLEgELLKQERVEVAAALARAEqsi 599
Cdd:PTZ00121 1086 DNRADEATEEAFGKAEEAKKTEtgKAEEARKAEEAkKKAEDARKAEEARKAEDARKAE-EARKAEDAKRVEIARKAE--- 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 600 vELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQqllqleqenqslcsRVEAA---EQLRSALQVDLAEAERRR 676
Cdd:PTZ00121 1162 -DARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDAR--------------KAEAArkaEEERKAEEARKAEDAKKA 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 677 EALwekktqletqlQKAEEAGAELQAELRGTREEKEELKDKLSEA---HHQQETATAHLEQLHQDAERQEETLARAVQEK 753
Cdd:PTZ00121 1227 EAV-----------KKAEEAKKDAEEAKKAEEERNNEEIRKFEEArmaHFARRQAAIKAEEARKADELKKAEEKKKADEA 1295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 754 EALVRERAALEVRLQAVERDRQDltEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEviqgEVKCL 833
Cdd:PTZ00121 1296 KKAEEKKKADEAKKKAEEAKKAD--EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEE----KAEAA 1369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 834 KLELDAERTRAEqEWDAVARQLAQAEQEGQASLERQKVAheEEVNRLQEKWEKerswlQQELDKTLEtlERERAELETKL 913
Cdd:PTZ00121 1370 EKKKEEAKKKAD-AAKKKAEEKKKADEAKKKAEEDKKKA--DELKKAAAAKKK-----ADEAKKKAE--EKKKADEAKKK 1439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 914 REQQTEMEAIRAQREEERsQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQA 993
Cdd:PTZ00121 1440 AEEAKKADEAKKKAEEAK-KAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKA 1518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 994 QLQETQQELKEAAQQHRDDLA--AFQKDKLDLQKQVEDLMSqlvAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENAS 1071
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKADEAkkAEEKKKADELKKAEELKK---AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIE 1595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1072 LALSLVEKEKRLlilqEADSVRQQELSSLR-QDIQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAE 1150
Cdd:PTZ00121 1596 EVMKLYEEEKKM----KAEEAKKAEEAKIKaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAE 1671
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 194018503 1151 QQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQ 1192
Cdd:PTZ00121 1672 EDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAE 1713
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
684-1152 |
1.94e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 684 TQLETQLQKAEEAgaELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLaravQEKEALVRERAAL 763
Cdd:PRK02224 190 DQLKAQIEEKEEK--DLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR----EELETLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 764 EVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTR 843
Cdd:PRK02224 264 RETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 844 AEQEWDAVARQLAQAE--QEGQASLERQKVAHEEEVNRLQEKWEkerswlqqELDKTLETLERERAELETKLREQQTEME 921
Cdd:PRK02224 344 AESLREDADDLEERAEelREEAAELESELEEAREAVEDRREEIE--------ELEEEIEELRERFGDAPVDLGNAEDFLE 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 922 AIRAQREEERSqaDSALYQMQLETEKERVSLLETLLRTQK-----------------------------ELADASQQLER 972
Cdd:PRK02224 416 ELREERDELRE--REAELEATLRTARERVEEAEALLEAGKcpecgqpvegsphvetieedrerveeleaELEDLEEEVEE 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 973 LrqDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKV 1052
Cdd:PRK02224 494 V--EERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAR 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1053 KVAQECSRIQKELEKENASLAlslvekekrllilqeadsvRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADF 1132
Cdd:PRK02224 572 EEVAELNSKLAELKERIESLE-------------------RIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEK 632
|
490 500
....*....|....*....|
gi 194018503 1133 VAREAQLLEELEASRVAEQQ 1152
Cdd:PRK02224 633 RERKRELEAEFDEARIEEAR 652
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1449-2000 |
2.91e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.54 E-value: 2.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1449 EVETLQAEVQELEK-QREMQKAA--LELLSlDLKKRSREVDLQQEQIQELEQCRSVLEHlpmavQEREQKLSVQRDQIRE 1525
Cdd:COG4913 226 AADALVEHFDDLERaHEALEDAReqIELLE-PIRELAERYAAARERLAELEYLRAALRL-----WFAQRRLELLEAELEE 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1526 LENDR---EAQRSVLEHQLLDLEQKAQVIESQR-----GQIQDLKKQLGTLECLALELEESHHKVESQQKMIT-ELEGQR 1596
Cdd:COG4913 300 LRAELarlEAELERLEARLDALREELDELEAQIrgnggDRLEQLEREIERLERELEERERRRARLEALLAALGlPLPASA 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1597 EMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQID----ELQKQQEQLAQALERKGQE 1672
Cdd:COG4913 380 EEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSnipaRLLALRDALAEALGLDEAE 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1673 LVLQKERIQVLEDQ-----------RTLQTKIL--EEDLEQIKHSLRERSQELASQWQLVHERADDGKSPsKGQRGSLEH 1739
Cdd:COG4913 460 LPFVGELIEVRPEEerwrgaiervlGGFALTLLvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERP-RLDPDSLAG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1740 lKLILRDKEKEvecqqeriQELQGHMGQleqqlQGLHRKVGETSLLLTHREQETATLQ----QHLQEAKEQGELREQVLQ 1815
Cdd:COG4913 539 -KLDFKPHPFR--------AWLEAELGR-----RFDYVCVDSPEELRRHPRAITRAGQvkgnGTRHEKDDRRRIRSRYVL 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1816 GQleEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALE--QAHATLKERQGELEEHREQVRRLQEE---LEV 1890
Cdd:COG4913 605 GF--DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREalQRLAEYSWDEIDVASAEREIAELEAElerLDA 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1891 EGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEaEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEE 1970
Cdd:COG4913 683 SSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE-QAEEELDELQDRLEAAEDLARLELRALLEERFAAALGD 761
|
570 580 590
....*....|....*....|....*....|.
gi 194018503 1971 AAVSQ-AEALQEALSKAQAALQEKEQSLLEQ 2000
Cdd:COG4913 762 AVERElRENLEERIDALRARLNRAEEELERA 792
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
524-762 |
3.96e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.85 E-value: 3.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 524 SAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELS 603
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 604 GSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLqleqenqslcSRVEAAEQLRSALQVDLAEAERRREALWEKK 683
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAV----------RRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 194018503 684 TQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAA 762
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
276-793 |
4.69e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.90 E-value: 4.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 276 EKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILEtnhAELMEHEASlsrnaQEEKLSLQQVIKAITQALASVE 355
Cdd:PRK02224 200 EEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEAD---EVLEEHEER-----REELETLEAEIEDLRETIAETE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 356 EE-----DTVTQSSGHEDSLQSDCNGL---SQFDPQDPDRALTLVQSVLTRRQQAVQDLRQQLSGCQEAMS---FLQQQH 424
Cdd:PRK02224 272 REreelaEEVRDLRERLEELEEERDDLlaeAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEeaeSLREDA 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 425 DQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLEVL 504
Cdd:PRK02224 352 DDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAEL 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 505 E---QEAWRLRRMNMELQLQG----------DSAQGEKLEQQEElhlavrERERLQETLVGLEAKQSESLSELLTLREAL 571
Cdd:PRK02224 432 EatlRTARERVEEAEALLEAGkcpecgqpveGSPHVETIEEDRE------RVEELEAELEDLEEEVEEVEERLERAEDLV 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 572 ESSRlEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSL 651
Cdd:PRK02224 506 EAED-RIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAEL 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 652 CSRVEAAEQLRSaLQVDLAEAERRREALWEKKTQLetqlqkaeeagAELQAELRGTREEKEELKDKLSEAHHQqetatAH 731
Cdd:PRK02224 585 KERIESLERIRT-LLAAIADAEDEIERLREKREAL-----------AELNDERRERLAEKRERKRELEAEFDE-----AR 647
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 194018503 732 LEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEhvlgLRSAKEQLES 793
Cdd:PRK02224 648 IEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEE----LRERREALEN 705
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1650-2261 |
4.71e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.00 E-value: 4.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1650 QQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSP 1729
Cdd:PTZ00121 1212 RKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKK 1291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1730 SKGQRGSLEHLKLilrDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGEL 1809
Cdd:PTZ00121 1292 ADEAKKAEEKKKA---DEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA 1368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1810 REQvlqgQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKlKTSALQAALEQahatlKERQGELEEHREQVRRlQEELE 1889
Cdd:PTZ00121 1369 AEK----KKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKK-KADELKKAAAA-----KKKADEAKKKAEEKKK-ADEAK 1437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1890 VEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQatltEQEQELAALRAENQYSRRQE 1969
Cdd:PTZ00121 1438 KKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE----EAKKKADEAKKAAEAKKKAD 1513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1970 EAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEE----ALRIREGEIQAQALQ 2045
Cdd:PTZ00121 1514 EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEdknmALRKAEEAKKAEEAR 1593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2046 HHEVTQHLQQELCQKKEELRQLLE---KAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEilmLREA 2122
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAEEAKKAEEakiKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEE---AKKA 1670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2123 SSPRHRALPAEKPALQPLPAQQELERLQTALRQTE---AREIEWREKAQDLALSLAQSKASISSLQeitmflqasvlERE 2199
Cdd:PTZ00121 1671 EEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEelkKKEAEEKKKAEELKKAEEENKIKAEEAK-----------KEA 1739
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 194018503 2200 SEQQRLQEELVLSRQALEEQQSGGPHSTSRADQGPKVGQGSQSGEVETEPSPGVEEKERLTQ 2261
Cdd:PTZ00121 1740 EEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIK 1801
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1254-1470 |
6.71e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.47 E-value: 6.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1254 VALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHE 1333
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1334 TAASLQSRLRQ---------AELQKMEAQNDRELLQASK---------EKLSAQVEHLQACVAEAQAQADAAAVLEEDLR 1395
Cdd:COG4942 91 EIAELRAELEAqkeelaellRALYRLGRQPPLALLLSPEdfldavrrlQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 1396 TARSALKLKNEELESERERAQALQEQGELKVAQgkaLQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAA 1470
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
673-1354 |
7.21e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.21 E-value: 7.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 673 ERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQE 752
Cdd:pfam15921 102 EKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLS 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 753 KEALVRERAALEVRLQavERDRQDLTEH----VLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIiqaKEVIQG 828
Cdd:pfam15921 182 HEGVLQEIRSILVDFE--EASGKKIYEHdsmsTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEAL---KSESQN 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 829 EVKCLkleLDAERTRAEQ-------------EWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQEL 895
Cdd:pfam15921 257 KIELL---LQQHQDRIEQliseheveitgltEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSEL 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 896 DKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQletekervSLLETLLRTQKELADASQQLERL-- 973
Cdd:pfam15921 334 REAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQ--------KLLADLHKREKELSLEKEQNKRLwd 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 974 ------------RQDMKIQKLKEQETTGMLQAQLQETQQELKEaaqqhrdDLAAFQKDKLDLQKqVEDLMSQLVAHDDSQ 1041
Cdd:pfam15921 406 rdtgnsitidhlRRELDDRNMEVQRLEALLKAMKSECQGQMER-------QMAAIQGKNESLEK-VSSLTAQLESTKEML 477
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1042 RLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRE---LGVQ- 1117
Cdd:pfam15921 478 RKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTEceaLKLQm 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1118 ------VELLRQEVK----------EKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEAL 1181
Cdd:pfam15921 558 aekdkvIEILRQQIEnmtqlvgqhgRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKL 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1182 VAEQQPE-------NQAQAQLASLCSVLQQALGSACES----RPELRGGGDSAPTLWGPDPDQNGASRLFKRWSLPTALS 1250
Cdd:pfam15921 638 VNAGSERlravkdiKQERDQLLNEVKTSRNELNSLSEDyevlKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKS 717
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1251 PEA-------VALALQKlhqDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNS 1323
Cdd:pfam15921 718 MEGsdghamkVAMGMQK---QITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEV 794
|
730 740 750
....*....|....*....|....*....|.
gi 194018503 1324 LESELRDLHETAASLQSRLRQAELQKMEAQN 1354
Cdd:pfam15921 795 LRSQERRLKEKVANMEVALDKASLQFAECQD 825
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
531-1434 |
8.06e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 8.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 531 EQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLR----EALESSRLEGELLKQERVEVAAALARAEQSIVELSGSE 606
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRrereKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 607 NSLKAEVADLRAAAVKLGALNEALAldkvelnqqllqleQENQSLCSRVEA-AEQLRSALQVDLAEAERRREALWEKKTQ 685
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIE--------------QLLEELNKKIKDlGEEEQLRVKEKIGELEAEIASLERSIAE 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 686 LETQLQKAEEAGAELQAELRGTREEKEELKDKLseahhqqetatahleqlhQDAERQEETLARAVQEKEAlvrERAALEV 765
Cdd:TIGR02169 313 KERELEDAEERLAKLEAEIDKLLAEIEELEREI------------------EEERKRRDKLTEEYAELKE---ELEDLRA 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 766 RLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKclklELDAERtrae 845
Cdd:TIGR02169 372 ELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN----ELEEEK---- 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 846 qewDAVARQLAQAEQEGQaSLERQKVAHEEEVNRLQEKwekerswlQQELDKTLETLERERAELETKLREQQTEMEAIRA 925
Cdd:TIGR02169 444 ---EDKALEIKKQEWKLE-QLAADLSKYEQELYDLKEE--------YDRVEKELSKLQRELAEAEAQARASEERVRGGRA 511
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 926 QREEERSQADSALYQM-QLETEKER-VSLLETLL--RTQKELADASQQLERLrqdmkIQKLKEQETTGMLQAQLQETQQE 1001
Cdd:TIGR02169 512 VEEVLKASIQGVHGTVaQLGSVGERyATAIEVAAgnRLNNVVVEDDAVAKEA-----IELLKRRKAGRATFLPLNKMRDE 586
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1002 LKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLV-------------AHDDSQRLV--KEEIEEKVKVAQECSR------ 1060
Cdd:TIGR02169 587 RRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFgdtlvvedieaarRLMGKYRMVtlEGELFEKSGAMTGGSRaprggi 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1061 -IQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELgvqvELLRQEVKEKEADFVAREAQL 1139
Cdd:TIGR02169 667 lFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEI----EKEIEQLEQEEEKLKERLEEL 742
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1140 LEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQaqlaslcsvLQQALGSACESRPELRGG 1219
Cdd:TIGR02169 743 EEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPE---------IQAELSKLEEEVSRIEAR 813
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1220 GDSAptlwgpdpDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQarDDLRDQVQKLVQRLTDTEAQKSQVHSE 1299
Cdd:TIGR02169 814 LREI--------EQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI--ENLNGKKEELEEELEELEAALRDLESR 883
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1300 LQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLrqaelqkmEAQNDREllqASKEKLSAQVEHLQACVAE 1379
Cdd:TIGR02169 884 LGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKL--------EALEEEL---SEIEDPKGEDEEIPEEELS 952
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 1380 AQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQE 1434
Cdd:TIGR02169 953 LEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1054-1901 |
1.65e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.00 E-value: 1.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1054 VAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFV 1133
Cdd:TIGR02169 196 KRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1134 AREAQLLEELEASRVAEQqlraslwaqeAKATQLQLQLRSTESQLEALVAEQQpenQAQAQLASLCSVLQQALGSACESR 1213
Cdd:TIGR02169 276 ELNKKIKDLGEEEQLRVK----------EKIGELEAEIASLERSIAEKERELE---DAEERLAKLEAEIDKLLAEIEELE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1214 PELrgggdsaptlwgpdpdqngasrlfkrwslptalspEAVALALQKLHQDVWKARQARDDLRDQVQKL-------VQRL 1286
Cdd:TIGR02169 343 REI-----------------------------------EEERKRRDKLTEEYAELKEELEDLRAELEEVdkefaetRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1287 TDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKL 1366
Cdd:TIGR02169 388 KDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKY 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1367 SAQVEHLQacvaeaqaqadaaavleEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENL----ALLAQT 1442
Cdd:TIGR02169 468 EQELYDLK-----------------EEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIqgvhGTVAQL 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1443 LSNRERE----------------VETLQAEVQELEKQREMQKAALELLSLDlKKRSREVDLQQEQIQeleqcrSVLEHLP 1506
Cdd:TIGR02169 531 GSVGERYataievaagnrlnnvvVEDDAVAKEAIELLKRRKAGRATFLPLN-KMRDERRDLSILSED------GVIGFAV 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1507 MAVQEREQKLSVQRDQIRE---LENDREAQRSVLEHQLLDLE----QKAQVI----ESQRGQIQDLKKQLGtleclalel 1575
Cdd:TIGR02169 604 DLVEFDPKYEPAFKYVFGDtlvVEDIEAARRLMGKYRMVTLEgelfEKSGAMtggsRAPRGGILFSRSEPA--------- 674
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1576 eeshhKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELEnhsthlaKELQERDQEVTSQRQQIDEL 1655
Cdd:TIGR02169 675 -----ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIE-------KEIEQLEQEEEKLKERLEEL 742
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1656 QKQQEQLAQALERKGQELVLQKERIQvledQRTLQTKILEEDLEQIKHSLRErsqelaSQWQLVHERADDGKSPSKGQRG 1735
Cdd:TIGR02169 743 EEDLSSLEQEIENVKSELKELEARIE----ELEEDLHKLEEALNDLEARLSH------SRIPEIQAELSKLEEEVSRIEA 812
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1736 SLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQEtatlqqhlqEAKEQGELREqvLQ 1815
Cdd:TIGR02169 813 RLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE---------LEELEAALRD--LE 881
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1816 GQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQV------RRLQEELE 1889
Cdd:TIGR02169 882 SRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPeeelslEDVQAELQ 961
|
890
....*....|..
gi 194018503 1890 VEGRQVRALEEV 1901
Cdd:TIGR02169 962 RVEEEIRALEPV 973
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
905-1138 |
1.73e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 1.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 905 ERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQlETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKE 984
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-ALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 985 QETTGMLQAQLQETQQelkeAAQQHRDDLAAFQKDKLDLQKQVEdLMSQLVAHDdsqrlvKEEIEEKVKVAQECSRIQKE 1064
Cdd:COG4942 100 EAQKEELAELLRALYR----LGRQPPLALLLSPEDFLDAVRRLQ-YLKYLAPAR------REQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 194018503 1065 LEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQ 1138
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
306-1118 |
1.92e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.00 E-value: 1.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 306 KALRETMEILETNHAELMEHEASLS--RNAQEEKLSLQQVIKAITQALASVEEEDTVTQSSGHEDSLQSDCNGLSQFDPQ 383
Cdd:TIGR02169 180 EEVEENIERLDLIIDEKRQQLERLRreREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 384 DPDRALTLVQSVLTRRQQAVQ----------DLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTV 453
Cdd:TIGR02169 260 ISELEKRLEEIEQLLEELNKKikdlgeeeqlRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIE 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 454 GLQGEVDSLTGERDALagqtvdlQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQ 533
Cdd:TIGR02169 340 ELEREIEEERKRRDKL-------TEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQ 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 534 EELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEV 613
Cdd:TIGR02169 413 EELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQREL 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 614 ADLRAAAvklGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQV------------DLAEAERRREALWE 681
Cdd:TIGR02169 493 AEAEAQA---RASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVaagnrlnnvvveDDAVAKEAIELLKR 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 682 KKTQLETQL------QKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLhQDAERQEE-----TLARAV 750
Cdd:TIGR02169 570 RKAGRATFLplnkmrDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDI-EAARRLMGkyrmvTLEGEL 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 751 QEK-----------EALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTI 819
Cdd:TIGR02169 649 FEKsgamtggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQL 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 820 IQAKEVIQGEVKCLKLELDA---ERTRAEQEWDAVARQLAQ------AEQEGQASLERQKVAHE-EEVNRLQEKWEKERS 889
Cdd:TIGR02169 729 EQEEEKLKERLEELEEDLSSleqEIENVKSELKELEARIEEleedlhKLEEALNDLEARLSHSRiPEIQAELSKLEEEVS 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 890 WLQ---QELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSalyqmqLETEKErvSLLETLLRTQKELADA 966
Cdd:TIGR02169 809 RIEarlREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEN------LNGKKE--ELEEELEELEAALRDL 880
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 967 SQQLERLRQDmkIQKLKEQettgmlQAQLQETQQELKEAAQQHRDDLAafqkdklDLQKQVEDLMSQLVAHDDSQRLVKE 1046
Cdd:TIGR02169 881 ESRLGDLKKE--RDELEAQ------LRELERKIEELEAQIEKKRKRLS-------ELKAKLEALEEELSEIEDPKGEDEE 945
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194018503 1047 EIEEKV---KVAQECSRIQKE---LEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQV 1118
Cdd:TIGR02169 946 IPEEELsleDVQAELQRVEEEiraLEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEA 1023
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
421-920 |
2.13e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 2.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 421 QQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQ 500
Cdd:PRK02224 250 REELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDR 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 501 LEVLEQEAWRLRRmnmelqlQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGEL 580
Cdd:PRK02224 330 LEECRVAAQAHNE-------EAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGD 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 581 LKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEA-------LALDKVELNQQLLQLEQENQSLCS 653
Cdd:PRK02224 403 APVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAgkcpecgQPVEGSPHVETIEEDRERVEELEA 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 654 RVEAAEQLRSALQ------VDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKdklSEAHHQQET 727
Cdd:PRK02224 483 ELEDLEEEVEEVEerleraEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELE---AEAEEKREA 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 728 ATAhleqLHQDAERQEETLARAVQEKEALVRERAALEvRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQV 807
Cdd:PRK02224 560 AAE----AEEEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRE 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 808 TKGQLEVQIQtiiqaKEVIQgevkclklELDAERTRAEQEWDAVARQLAQAEQEgQASLERQKVAHEEEVNRLQEKWEkE 887
Cdd:PRK02224 635 RKRELEAEFD-----EARIE--------EAREDKERAEEYLEQVEEKLDELREE-RDDLQAEIGAVENELEELEELRE-R 699
|
490 500 510
....*....|....*....|....*....|...
gi 194018503 888 RSWLQQELDKtLETLERERAELETKLREQQTEM 920
Cdd:PRK02224 700 REALENRVEA-LEALYDEAEELESMYGDLRAEL 731
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
672-1051 |
2.96e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 56.12 E-value: 2.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 672 AERRREALwEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLeQLHQDAERQEETLARAVQ 751
Cdd:PRK04863 278 ANERRVHL-EEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKIERYQA 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 752 EKEALVrerAALEVRLQAVErdrqDLTEHVLGLRSAKEQLESNLFEAQ------QQNSVIQVTKGqleVQIQTIIQAKEV 825
Cdd:PRK04863 356 DLEELE---ERLEEQNEVVE----EADEQQEENEARAEAAEEEVDELKsqladyQQALDVQQTRA---IQYQQAVQALER 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 826 IQGEVKCLKLELD------AERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHE------EEVNRlQEKWEKERSWL-- 891
Cdd:PRK04863 426 AKQLCGLPDLTADnaedwlEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQlvrkiaGEVSR-SEAWDVARELLrr 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 892 ---QQELDKTLETLERERAELETKLREQQTemeAIRAQREeersqadsalYQMQLETEKERVSLLETLLrtqkeladasQ 968
Cdd:PRK04863 505 lreQRHLAEQLQQLRMRLSELEQRLRQQQR---AERLLAE----------FCKRLGKNLDDEDELEQLQ----------E 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 969 QLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQK---------DKLDLQKQVEDLMSQLVAHDD 1039
Cdd:PRK04863 562 ELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDAlarlreqsgEEFEDSQDVTEYMQQLLERER 641
|
410
....*....|..
gi 194018503 1040 SQRLVKEEIEEK 1051
Cdd:PRK04863 642 ELTVERDELAAR 653
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
816-1669 |
3.56e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.13 E-value: 3.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 816 IQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERswlQQEL 895
Cdd:pfam02463 186 AELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQ---EIEK 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 896 DKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQ 975
Cdd:pfam02463 263 EEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEK 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 976 DMKIQKLKEQEttgmLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLmsqlvahdDSQRLVKEEIEEKVKVA 1055
Cdd:pfam02463 343 ELKELEIKREA----EEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLK--------EEELELKSEEEKEAQLL 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1056 QECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAR 1135
Cdd:pfam02463 411 LELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLL 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1136 EAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRStESQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPE 1215
Cdd:pfam02463 491 SRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAH-GRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRA 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1216 LRGGGDSAPTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQ 1295
Cdd:pfam02463 570 LTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLR 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1296 VHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEaqndrELLQASKEKLSAQVEHLQA 1375
Cdd:pfam02463 650 KGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKE-----QREKEELKKLKLEAEELLA 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1376 CVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQA 1455
Cdd:pfam02463 725 DRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELR 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1456 EVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCR--SVLEHLPMAVQEREQKLSVQRDQIRELENDREAQ 1533
Cdd:pfam02463 805 ALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLekLAEEELERLEEEITKEELLQELLLKEEELEEQKL 884
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1534 RSVLEHQLLDLEQKAQVIESQRGQIQDLKKQlgtLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEER 1613
Cdd:pfam02463 885 KDELESKEEKEKEEKKELEEESQKLNLLEEK---ENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEER 961
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 194018503 1614 SQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERK 1669
Cdd:pfam02463 962 NKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQ 1017
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1452-1888 |
5.41e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.03 E-value: 5.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1452 TLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEqcrSVLEHLPMAVQEREQKLSVQRDQIRELENdre 1531
Cdd:TIGR04523 215 SLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLK---DEQNKIKKQLSEKQKELEQNNKKIKELEK--- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1532 aQRSVLEHQLLDLE-QKAQVIESQ-RGQIQDLKKQLgtleclalelEESHHKVESQQKMITELEGQREMQRVALTHLTLD 1609
Cdd:TIGR04523 289 -QLNQLKSEISDLNnQKEQDWNKElKSELKNQEKKL----------EEIQNQISQNNKIISQLNEQISQLKKELTNSESE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1610 LEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTL 1689
Cdd:TIGR04523 358 NSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIK 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1690 QTKILeEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLE 1769
Cdd:TIGR04523 438 NNSEI-KDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLT 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1770 QQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEqgELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESM 1849
Cdd:TIGR04523 517 KKISSLKEKIEKLESEKKEKESKISDLEDELNKDDF--ELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQK 594
|
410 420 430
....*....|....*....|....*....|....*....
gi 194018503 1850 KLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEEL 1888
Cdd:TIGR04523 595 EKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSII 633
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
876-1724 |
5.43e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 55.36 E-value: 5.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 876 EVNRLQEKWEKERSWLQQELDKTLETlERERAELETKLREQQTEMEAIRAQREEERSQADSALyqMQLETEKERVSLLET 955
Cdd:pfam02463 143 KIEIIAMMKPERRLEIEEEAAGSRLK-RKKKEALKKLIEETENLAELIIDLEELKLQELKLKE--QAKKALEYYQLKEKL 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 956 LLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLV 1035
Cdd:pfam02463 220 ELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELK 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1036 AHDDSQRLVKEEIEEKVKVAQ-ECSRIQKELEKE-----NASLALSLVEKEKRLLILQEADSVRQQELSSLRQD------ 1103
Cdd:pfam02463 300 SELLKLERRKVDDEEKLKESEkEKKKAEKELKKEkeeieELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEellakk 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1104 -IQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEEL-------EASRVAEQQLRASLWAQEAKATQLQLQLRSTE 1175
Cdd:pfam02463 380 kLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLlkeekkeELEILEEEEESIELKQGKLTEEKEELEKQELK 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1176 SQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPELRGGGDSAPTLWGPDPDQNGASRLFKRWSLPTALSPEAVA 1255
Cdd:pfam02463 460 LLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVE 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1256 LALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLesELRDLHETA 1335
Cdd:pfam02463 540 NYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQL--DKATLEADE 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1336 ASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERA 1415
Cdd:pfam02463 618 DDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRR 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1416 QALQEQGELKVAQgkALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQEL 1495
Cdd:pfam02463 698 QLEIKKKEQREKE--ELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKE 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1496 EQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALEL 1575
Cdd:pfam02463 776 LAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEE 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1576 EESHHKVESQQKMI-TELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDE 1654
Cdd:pfam02463 856 LERLEEEITKEELLqELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEE 935
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 194018503 1655 LQKQQEQLAQALERKGQE-LVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERAD 1724
Cdd:pfam02463 936 EPEELLLEEADEKEKEENnKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKK 1006
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
569-1196 |
5.74e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 55.23 E-value: 5.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 569 EALESSRLE--GELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQ 646
Cdd:pfam12128 271 ETLIASRQEerQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLP 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 647 ENQSLCSRVEAAEQLRSALQVDLAEAERRREALW-------------EKKTQLETQLQKAEEAGAELQAELRGTREEKEE 713
Cdd:pfam12128 351 SWQSELENLEERLKALTGKHQDVTAKYNRRRSKIkeqnnrdiagikdKLAKIREARDRQLAVAEDDLQALESELREQLEA 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 714 LKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLES 793
Cdd:pfam12128 431 GKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQ 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 794 NLFEAQQQNSVIQVTKGQLEVQIQTIIQ--AKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKV 871
Cdd:pfam12128 511 ASRRLEERQSALDELELQLFPQAGTLLHflRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRI 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 872 AHEEevnrlqekwekersWLQQEldktlETLERERAELETKLREQQTEMEAIraqrEEERSQADSALYQMQLETEKERVS 951
Cdd:pfam12128 591 DVPE--------------WAASE-----EELRERLDKAEEALQSAREKQAAA----EEQLVQANGELEKASREETFARTA 647
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 952 LLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDlm 1031
Cdd:pfam12128 648 LKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEG-- 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1032 sqlvAHDDSQRLVKEEIE-EKVKVAQECSRIQKELEKENASLA-----LSLVEKEKRLLILQEAD-SVRQQELSSLRQDI 1104
Cdd:pfam12128 726 ----ALDAQLALLKAAIAaRRSGAKAELKALETWYKRDLASLGvdpdvIAKLKREIRTLERKIERiAVRRQEVLRYFDWY 801
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1105 QEAQEGQRE-LGVQVELLRQEVKEKEADFvareAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLeALVA 1183
Cdd:pfam12128 802 QETWLQRRPrLATQLSNIERAISELQQQL----ARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKL-ATLK 876
|
650
....*....|...
gi 194018503 1184 EQQPENQAQAQLA 1196
Cdd:pfam12128 877 EDANSEQAQGSIG 889
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1272-2043 |
9.23e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.57 E-value: 9.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1272 RDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEekskwegRQNSLESELRDLHETAASLQSRLRQAElqkmE 1351
Cdd:COG3096 280 RRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSA-------RESDLEQDYQAASDHLNLVQTALRQQE----K 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1352 AQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERA----QALQeqgelkvA 1427
Cdd:COG3096 349 IERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAiqyqQAVQ-------A 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1428 QGKAlQENLALLAQTLSNREREVETLQAEVQELEKQRemqkaalellsLDLKKRSREVDLQQEQIQELEQcrsVLEHLPM 1507
Cdd:COG3096 422 LEKA-RALCGLPDLTPENAEDYLAAFRAKEQQATEEV-----------LELEQKLSVADAARRQFEKAYE---LVCKIAG 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1508 AVqEREQKLSVQRDQIRELENDRE--AQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQ 1585
Cdd:COG3096 487 EV-ERSQAWQTARELLRRYRSQQAlaQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQ 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1586 QKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQER---DQEVTSQRQQIDELQKQQEQL 1662
Cdd:COG3096 566 LEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEAladSQEVTAAMQQLLEREREATVE 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1663 AQALERKGQELVLQKERIQVL---EDQRTLQTK---------------------------------ILEEDLEQIKHSLR 1706
Cdd:COG3096 646 RDELAARKQALESQIERLSQPggaEDPRLLALAerlggvllseiyddvtledapyfsalygparhaIVVPDLSAVKEQLA 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1707 ER-----------------------SQELA-------SQWQLVHERADdgKSPSKGQRGSLEHLKLILRDKEKEVE---- 1752
Cdd:COG3096 726 GLedcpedlyliegdpdsfddsvfdAEELEdavvvklSDRQWRYSRFP--EVPLFGRAAREKRLEELRAERDELAEqyak 803
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1753 --CQQERIQELQGHMGQL-------------EQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQ 1817
Cdd:COG3096 804 asFDVQKLQRLHQAFSQFvgghlavafapdpEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLPQA 883
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1818 LEEAQRDLAQRdheLETLRQEKQQTQDQEESMKLKTSALqAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRA 1897
Cdd:COG3096 884 NLLADETLADR---LEELREELDAAQEAQAFIQQHGKAL-AQLEPLVAVLQSDPEQFEQLQADYLQAKEQQRRLKQQIFA 959
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1898 LEEVLGDLRAESREHEKAVL----ALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAV 1973
Cdd:COG3096 960 LSEVVQRRPHFSYEDAVGLLgensDLNEKLRARLEQAEEARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELE 1039
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 194018503 1974 SQAEAL-----QEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALR-IREGEIQAQA 2043
Cdd:COG3096 1040 QELEELgvqadAEAEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKqEREQVVQAKA 1115
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1404-1997 |
9.79e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 54.26 E-value: 9.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1404 KNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSR 1483
Cdd:TIGR04523 31 QDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1484 EVDLqqeqiqeleqcrsvlehlpmavqeREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKK 1563
Cdd:TIGR04523 111 EIKN------------------------DKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1564 QLGTLECLALELEESHHKVESQQKMItelegqrEMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQ 1643
Cdd:TIGR04523 167 QKEELENELNLLEKEKLNIQKNIDKI-------KNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1644 EVTSQRQQIDELQKQQEQLAQALERKGQELvlqKERIQVLEDQRTLqTKILEEDLEQIKHSLRERSQELASQWqlvhera 1723
Cdd:TIGR04523 240 EINEKTTEISNTQTQLNQLKDEQNKIKKQL---SEKQKELEQNNKK-IKELEKQLNQLKSEISDLNNQKEQDW------- 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1724 ddgkspskgqrgsLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKvgetsllLTHREQETATLQQHLQEA 1803
Cdd:TIGR04523 309 -------------NKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKE-------LTNSESENSEKQRELEEK 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1804 KEqgelreqvlqgqleeaqrdlaqrdhELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRR 1883
Cdd:TIGR04523 369 QN-------------------------EIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKEL 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1884 LQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQ---EHEAEARTLQDSWLQAQATLTEQEQELAALRA 1960
Cdd:TIGR04523 424 LEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETqlkVLSRSINKIKQNLEQKQKELKSKEKELKKLNE 503
|
570 580 590
....*....|....*....|....*....|....*..
gi 194018503 1961 ENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSL 1997
Cdd:TIGR04523 504 EKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1794-2110 |
1.31e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 54.15 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1794 ATLQQHLQEAKEQGELREQ--VLQGQLEEAQRDLAQRD---HELETLRQE-----KQQTQDQEESMKLKTSALQAALEQ- 1862
Cdd:PRK11281 39 ADVQAQLDALNKQKLLEAEdkLVQQDLEQTLALLDKIDrqkEETEQLKQQlaqapAKLRQAQAELEALKDDNDEETRETl 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1863 AHATLKERQGELEEHREQVRRLQEEL-------------------EVEGRQVRALEevLGDLRAESREHEKAVLALQQ-- 1921
Cdd:PRK11281 119 STLSLRQLESRLAQTLDQLQNAQNDLaeynsqlvslqtqperaqaALYANSQRLQQ--IRNLLKGGKVGGKALRPSQRvl 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1922 RCAEQA--------QEHEAEARTLQDSWLQAQ-----ATLTEQEQELAALRAE-NQYSRRQEEAAVSQAEALQEALSKAQ 1987
Cdd:PRK11281 197 LQAEQAllnaqndlQRKSLEGNTQLQDLLQKQrdyltARIQRLEHQLQLLQEAiNSKRLTLSEKTVQEAQSQDEAARIQA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1988 AALQEKE--------QSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEI--------QAQALQHHEVTQ 2051
Cdd:PRK11281 277 NPLVAQEleinlqlsQRLLKATEKLNTLTQQNLRVKNWLDRLTQSERNIKEQISVLKGSLllsrilyqQQQALPSADLIE 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194018503 2052 HL----------QQELCQKKEELRQL---LEKAGARRSQENGIQEKQSLEQ---ERQEetrrLLESL-KEL--QLTVA 2110
Cdd:PRK11281 357 GLadriadlrleQFEINQQRDALFQPdayIDKLEAGHKSEVTDEVRDALLQlldERRE----LLDQLnKQLnnQLNLA 430
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1258-1891 |
1.35e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.15 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1258 LQKLHQDVWKARQARDDLR------DQVQKLVQRLTDTEAQKSQVhsELQDLQRQLSQSQEEKSKWEGRQNSLESELRDL 1331
Cdd:COG4913 237 LERAHEALEDAREQIELLEpirelaERYAAARERLAELEYLRAAL--RLWFAQRRLELLEAELEELRAELARLEAELERL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1332 HETAASLQSRLRQAELQKMEAQNDRellqasKEKLSAQVEHLQAcvaEAQAQADAAAVLEEDLRTARSALKLKNEELESE 1411
Cdd:COG4913 315 EARLDALREELDELEAQIRGNGGDR------LEQLEREIERLER---ELEERERRRARLEALLAALGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1412 RERAQALQEQGElkvAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQR----EMQKAALELLSLDLKKRSRE--- 1484
Cdd:COG4913 386 RAEAAALLEALE---EELEALEEALAEAEAALRDLRRELRELEAEIASLERRKsnipARLLALRDALAEALGLDEAElpf 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1485 ----VDLQQEQIQELEQCRSVL-----------EHLPMA---VQEREQKLSVQRDQIREleNDREAQRSVLEHQLLdleq 1546
Cdd:COG4913 463 vgelIEVRPEEERWRGAIERVLggfaltllvppEHYAAAlrwVNRLHLRGRLVYERVRT--GLPDPERPRLDPDSL---- 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1547 kAQVIESQRGQIQD-LKKQLGtleclaleLEESHHKVESQQkmitelegqremqrvalthlTLDLEERSQELQAQSSQLH 1625
Cdd:COG4913 537 -AGKLDFKPHPFRAwLEAELG--------RRFDYVCVDSPE--------------------ELRRHPRAITRAGQVKGNG 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1626 ELENHSTHlaKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKhsL 1705
Cdd:COG4913 588 TRHEKDDR--RRIRSRYVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEID--V 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1706 RERSQELAsQWQLVHERADDGKSpskgqrgSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLL 1785
Cdd:COG4913 664 ASAEREIA-ELEAELERLDASSD-------DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDR 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1786 LTHREQE-----TATLQQHLQEAKEQGELRE--QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEesmklkTSALQA 1858
Cdd:COG4913 736 LEAAEDLarlelRALLEERFAAALGDAVERElrENLEERIDALRARLNRAEEELERAMRAFNREWPAE------TADLDA 809
|
650 660 670
....*....|....*....|....*....|....*..
gi 194018503 1859 ALEQAHATLKERQG----ELEEHREQVRRLQEELEVE 1891
Cdd:COG4913 810 DLESLPEYLALLDRleedGLPEYEERFKELLNENSIE 846
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1652-1987 |
1.47e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.92 E-value: 1.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1652 IDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDgkspsk 1731
Cdd:TIGR02169 193 IDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKR------ 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1732 gqrgsLEHLKLILRDKEKEVE-CQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGElr 1810
Cdd:TIGR02169 267 -----LEEIEQLLEELNKKIKdLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIE-- 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1811 eqVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEV 1890
Cdd:TIGR02169 340 --ELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQR 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1891 EGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEaeartlqdswlQAQATLTEQEQELAALRAE-NQYSRRQE 1969
Cdd:TIGR02169 418 LSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE-----------QLAADLSKYEQELYDLKEEyDRVEKELS 486
|
330 340
....*....|....*....|
gi 194018503 1970 EAA--VSQAEALQEALSKAQ 1987
Cdd:TIGR02169 487 KLQreLAEAEAQARASEERV 506
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
658-1218 |
1.50e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.81 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 658 AEQLrSALQVDLAEAERRRE---ALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQ 734
Cdd:PRK04863 512 AEQL-QQLRMRLSELEQRLRqqqRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQ 590
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 735 LHQDAERQEETLARAVQEKEALVRER----AALEVRlQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKG 810
Cdd:PRK04863 591 LQARIQRLAARAPAWLAAQDALARLReqsgEEFEDS-QDVTEYMQQLLERERELTVERDELAARKQALDEEIERLSQPGG 669
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 811 QLEVQIQTIIQ----------------------------------------AKEVIQGEVKCLKL---------ELDAER 841
Cdd:PRK04863 670 SEDPRLNALAErfggvllseiyddvsledapyfsalygparhaivvpdlsdAAEQLAGLEDCPEDlyliegdpdSFDDSV 749
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 842 TRAEQEWDAVARQLAQAEQE----------GQASLERQKVAHEEEVNRLQEKWEKeRSWLQQELDKTLETLER------- 904
Cdd:PRK04863 750 FSVEELEKAVVVKIADRQWRysrfpevplfGRAAREKRIEQLRAEREELAERYAT-LSFDVQKLQRLHQAFSRfigshla 828
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 905 ---------ERAELETKLREQQTEMEAIRAQREEERSQADSAlyqmqleteKERVSLLETLLRTQKELADAS--QQLERL 973
Cdd:PRK04863 829 vafeadpeaELRQLNRRRVELERALADHESQEQQQRSQLEQA---------KEGLSALNRLLPRLNLLADETlaDRVEEI 899
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 974 RQDMKIQKLKEQ--ETTGMLQAQLQETQQELKEAAQQH---RDDLAAFQKDKLDLQKQVEDLMS--QLVAH---DDSQRL 1043
Cdd:PRK04863 900 REQLDEAEEAKRfvQQHGNALAQLEPIVSVLQSDPEQFeqlKQDYQQAQQTQRDAKQQAFALTEvvQRRAHfsyEDAAEM 979
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1044 VKEE------IEEKVKVA-QECSRIQKELEKENASLAlslvEKEKRLLILQEADSVRQQELSSLRQDIQeaqegqrELGV 1116
Cdd:PRK04863 980 LAKNsdlnekLRQRLEQAeQERTRAREQLRQAQAQLA----QYNQVLASLKSSYDAKRQMLQELKQELQ-------DLGV 1048
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1117 QVEllrqevKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLealvaeQQPENQAQAQLA 1196
Cdd:PRK04863 1049 PAD------SGAEERARARRDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDY------HEMREQVVNAKA 1116
|
650 660
....*....|....*....|..
gi 194018503 1197 SLCSVLQQALGSACESRPELRG 1218
Cdd:PRK04863 1117 GWCAVLRLVKDNGVERRLHRRE 1138
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1302-2116 |
1.50e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.81 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1302 DLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAE--LQKMEA----QNDRELLQASKEKLSAQVEHLQA 1375
Cdd:PRK04863 290 ELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASdhLNLVQTalrqQEKIERYQADLEELEERLEEQNE 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1376 CVAeaqaqadaaavlEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLA-----QTLSNREREV 1450
Cdd:PRK04863 370 VVE------------EADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQAlerakQLCGLPDLTA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1451 ETLQAEVQELekQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEhlpmavQEREQKLSVQRDQIRELENDR 1530
Cdd:PRK04863 438 DNAEDWLEEF--QAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGE------VSRSEAWDVARELLRRLREQR 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1531 --EAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTL 1608
Cdd:PRK04863 510 hlAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLE 589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1609 DLEERSQELQAQSSQLHELENHSTHlakeLQERDQEVTSQRQQIDELQKQQeqlaqaLERkgqELVLQKERIQVLEDQRT 1688
Cdd:PRK04863 590 QLQARIQRLAARAPAWLAAQDALAR----LREQSGEEFEDSQDVTEYMQQL------LER---ERELTVERDELAARKQA 656
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1689 LQTKIleEDLEQIKHSLRERSQELASQW--QLVHERADD---GKSPSKGQR-GSLEHlkLILRDKEKEVECQQERIQELQ 1762
Cdd:PRK04863 657 LDEEI--ERLSQPGGSEDPRLNALAERFggVLLSEIYDDvslEDAPYFSALyGPARH--AIVVPDLSDAAEQLAGLEDCP 732
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1763 GHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQ----QHLQEAKEQGELREQVLqgQLEEAQRDLAQRDHELETLRQE 1838
Cdd:PRK04863 733 EDLYLIEGDPDSFDDSVFSVEELEKAVVVKIADRQwrysRFPEVPLFGRAAREKRI--EQLRAEREELAERYATLSFDVQ 810
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1839 KQQTQDQEESMKLKTSAL-------QAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESRE 1911
Cdd:PRK04863 811 KLQRLHQAFSRFIGSHLAvafeadpEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLADE 890
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1912 HekavlaLQQRCAEqAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQySRRQEEAAVSQAEALQEALSKAQAALQ 1991
Cdd:PRK04863 891 T------LADRVEE-IREQLDEAEEAKRFVQQHGNALAQLEPIVSVLQSDPE-QFEQLKQDYQQAQQTQRDAKQQAFALT 962
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1992 EKEQSLLEQA-ELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLlek 2070
Cdd:PRK04863 963 EVVQRRAHFSyEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQEL--- 1039
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 194018503 2071 agARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEI 2116
Cdd:PRK04863 1040 --KQELQDLGVPADSGAEERARARRDELHARLSANRSRRNQLEKQL 1083
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
414-631 |
1.56e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.84 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 414 QEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKA 493
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 494 RGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALES 573
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 194018503 574 SRLEgelLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALA 631
Cdd:COG4942 179 LLAE---LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1590-1957 |
1.81e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.81 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1590 TELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQeRDQEVTSQRQQIDELQKQQEQLAQALERk 1669
Cdd:PRK04863 289 LELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLN-LVQTALRQQEKIERYQADLEELEERLEE- 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1670 gQELVLQKERIQVLEDQRtlQTKILEEDLEQIKHSLRERSQEL------ASQWQLVHERADDGKSPSKGQRGSLEHLKL- 1742
Cdd:PRK04863 367 -QNEVVEEADEQQEENEA--RAEAAEEEVDELKSQLADYQQALdvqqtrAIQYQQAVQALERAKQLCGLPDLTADNAEDw 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1743 --ILRDKEKEVECQ----QERIQELQGHMGQLEQQLQGLHRKVGETSlllthREQETATLQQHLQEAKEQGELREQV--L 1814
Cdd:PRK04863 444 leEFQAKEQEATEEllslEQKLSVAQAAHSQFEQAYQLVRKIAGEVS-----RSEAWDVARELLRRLREQRHLAEQLqqL 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1815 QGQLEEAQRDLAQRdHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQ 1894
Cdd:PRK04863 519 RMRLSELEQRLRQQ-QRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQR 597
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 194018503 1895 VRALEEV---LGDLRAESREHEKAVLALQQRCAEQAQ---EHEAEARTLQDSWLQAQATLTEQEQELAA 1957
Cdd:PRK04863 598 LAARAPAwlaAQDALARLREQSGEEFEDSQDVTEYMQqllERERELTVERDELAARKQALDEEIERLSQ 666
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1789-2315 |
1.83e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.51 E-value: 1.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1789 REQETATLQQHLQ-EAKEQGELREQvlqgqLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSA----------LQ 1857
Cdd:PRK02224 183 SDQRGSLDQLKAQiEEKEEKDLHER-----LNGLESELAELDEEIERYEEQREQARETRDEADEVLEEheerreeletLE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1858 AALEQAHATLKERQGELEEHREQVRRLQEEL-EVEGRQVRALEEV-LGDLRAESREHEKAVLALQ--------QRCAEQA 1927
Cdd:PRK02224 258 AEIEDLRETIAETEREREELAEEVRDLRERLeELEEERDDLLAEAgLDDADAEAVEARREELEDRdeelrdrlEECRVAA 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1928 QEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTL 2007
Cdd:PRK02224 338 QAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2008 EASTAALQATLDTCQASARQLEEalRIREGEIQAQALQHHEVTQHLQ--------QELCQKKEELRQLLEKAGARRSQEN 2079
Cdd:PRK02224 418 REERDELREREAELEATLRTARE--RVEEAEALLEAGKCPECGQPVEgsphvetiEEDRERVEELEAELEDLEEEVEEVE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2080 GIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLRE-ASSPRHRAlpaekpalQPLPAQQELERLQTALRQTEA 2158
Cdd:PRK02224 496 ERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRErAEELRERA--------AELEAEAEEKREAAAEAEEEA 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2159 REIewREKAQDLALSLAQSKASISSLQEITMfLQASVLERESEQQRLQEElvlsRQALEEQQSggphstsradqgpkvgq 2238
Cdd:PRK02224 568 EEA--REEVAELNSKLAELKERIESLERIRT-LLAAIADAEDEIERLREK----REALAELND----------------- 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2239 gsqsgevetepspgvEEKERLTQRLERLQQAVAELEVDR-SKLQCHNAQLRTALEQVERERRKL--KRDSVRaSRAGSLE 2315
Cdd:PRK02224 624 ---------------ERRERLAEKRERKRELEAEFDEARiEEAREDKERAEEYLEQVEEKLDELreERDDLQ-AEIGAVE 687
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
942-1472 |
2.64e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 2.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 942 QLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTgmlQAQLQETQQELKEAAQQHRDDLAAFQKDKL 1021
Cdd:COG4913 243 ALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRR---LELLEAELEELRAELARLEAELERLEARLD 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1022 DLQKQVEDLMSQLVAHDDSQR-LVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSL 1100
Cdd:COG4913 320 ALREELDELEAQIRGNGGDRLeQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEE 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1101 RQDIQEAQegqRELGVQVELLRQEVKEKEADFV----------AREAQLLEEL-EASRVAEQQLR-----------ASLW 1158
Cdd:COG4913 400 LEALEEAL---AEAEAALRDLRRELRELEAEIAslerrksnipARLLALRDALaEALGLDEAELPfvgelievrpeEERW 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1159 -------------------AQEAKAT----QLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSV--------LQQALG 1207
Cdd:COG4913 477 rgaiervlggfaltllvppEHYAAALrwvnRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFkphpfrawLEAELG 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1208 SA-----CESRPELRGGGDS---------APTLWgpdpDQNGASRLFKRWSLptalspeavalalqklhqdVWKARQARD 1273
Cdd:COG4913 557 RRfdyvcVDSPEELRRHPRAitragqvkgNGTRH----EKDDRRRIRSRYVL-------------------GFDNRAKLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1274 DLRDQVQKLVQRLTDTEAQksqvhseLQDLQRQLSQSQEEKSKWEGRQNSLESELRdlhetAASLQSRLRQAELQKMEAQ 1353
Cdd:COG4913 614 ALEAELAELEEELAEAEER-------LEALEAELDALQERREALQRLAEYSWDEID-----VASAEREIAELEAELERLD 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1354 NDRELLQASKEKLSAQVEHLQACVAEAqaqadaaavleEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQ 1433
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEEL-----------DELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL 750
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 194018503 1434 ENLALLAQTLSNREREV-ETLQAEVQELEKQREMQKAALE 1472
Cdd:COG4913 751 LEERFAAALGDAVERELrENLEERIDALRARLNRAEEELE 790
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
807-1156 |
2.66e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 52.82 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 807 VTKGQLEVQIQTIIQAKEVIQGEVKCLKLE-LDAERTRAEQEWDAVA----RQLAQAEQEGQASLERQKVAHEEEVNRLQ 881
Cdd:pfam17380 265 MTENEFLNQLLHIVQHQKAVSERQQQEKFEkMEQERLRQEKEEKAREverrRKLEEAEKARQAEMDRQAAIYAEQERMAM 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 882 EKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEE-RSQADSALYQMQLETEKERvslleTLLRTQ 960
Cdd:pfam17380 345 ERERELERIRQEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERvRQELEAARKVKILEEERQR-----KIQQQK 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 961 KELADASQQLERLRQdMKIQKLKEQETTGMLQAQLQEtqQELKEAAQQHRDDLAAFQKDKLDLQKQVEDlmsQLVAHDDS 1040
Cdd:pfam17380 420 VEMEQIRAEQEEARQ-REVRRLEEERAREMERVRLEE--QERQQQVERLRQQEEERKRKKLELEKEKRD---RKRAEEQR 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1041 QRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRllilQEADSVRQQElsslrqdiQEAQEGQRelgVQVEL 1120
Cdd:pfam17380 494 RKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERR----REAEEERRKQ--------QEMEERRR---IQEQM 558
|
330 340 350
....*....|....*....|....*....|....*.
gi 194018503 1121 LRQEVKEKEADFVAREAQLLEELEASRVAEQQLRAS 1156
Cdd:pfam17380 559 RKATEERSRLEAMEREREMMRQIVESEKARAEYEAT 594
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
272-801 |
3.04e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 3.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 272 HGDLEKAELQDRvtelsaLLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEASLSRNAQEEklsLQQVIKAITQAL 351
Cdd:COG4913 241 HEALEDAREQIE------LLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEE---LRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 352 ASVEEEdtVTQSSGHEDSLQSDCNGLSQFDPQDPDRALTLVQSVLTRRQQAVQDLRQQLSGCQEAM----SFLQQQHDQW 427
Cdd:COG4913 312 ERLEAR--LDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLpasaEEFAALRAEA 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 428 EEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLsreRELLQKARGELQQQLEVL--- 504
Cdd:COG4913 390 AALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLAL---RDALAEALGLDEAELPFVgel 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 505 -----EQEAWrlrRMNMELQLQG--------DSAQGEKLEQQEELHLAVR---ERERLQETLVGLEAKQSESLSELLTLR 568
Cdd:COG4913 467 ievrpEEERW---RGAIERVLGGfaltllvpPEHYAAALRWVNRLHLRGRlvyERVRTGLPDPERPRLDPDSLAGKLDFK 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 569 EALESSRLEGELLKQ---ERVEVAAALARAEQSI-----VELSGSENSLKAEVADLRA------AAVKLGALNE---ALA 631
Cdd:COG4913 544 PHPFRAWLEAELGRRfdyVCVDSPEELRRHPRAItragqVKGNGTRHEKDDRRRIRSRyvlgfdNRAKLAALEAelaELE 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 632 LDKVELNQQLLQLEQENQSLCSRVEAAEQLR--SALQVDLAEAERRREALWEKKTQLET---QLQKAEEAGAELQAELRG 706
Cdd:COG4913 624 EELAEAEERLEALEAELDALQERREALQRLAeySWDEIDVASAEREIAELEAELERLDAssdDLAALEEQLEELEAELEE 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 707 TREEKEELKDKLSEAHHQQETATAHLEQLhqdAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRS 786
Cdd:COG4913 704 LEEELDELKGEIGRLEKELEQAEEELDEL---QDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRA 780
|
570
....*....|....*
gi 194018503 787 AKEQLESNLFEAQQQ 801
Cdd:COG4913 781 RLNRAEEELERAMRA 795
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
669-1024 |
3.21e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.03 E-value: 3.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 669 LAEAERRREALwEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLeQLHQDAERQEETLAR 748
Cdd:COG3096 274 MRHANERRELS-ERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHL-NLVQTALRQQEKIER 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 749 AVQEKEAL-VRERAALEVRLQAVERdRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQ 827
Cdd:COG3096 352 YQEDLEELtERLEEQEEVVEEAAEQ-LAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEKARALCG 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 828 G---EVKCLKLELDAERTRaEQEWDAVARQLAQAEQEGQASLERQKVAHE------EEVNRlQEKWEKERSWL-----QQ 893
Cdd:COG3096 431 LpdlTPENAEDYLAAFRAK-EQQATEEVLELEQKLSVADAARRQFEKAYElvckiaGEVER-SQAWQTARELLrryrsQQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 894 ELDKTLETLERERAELETKLREQQtemEAIR-----AQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQ 968
Cdd:COG3096 509 ALAQRLQQLRAQLAELEQRLRQQQ---NAERlleefCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQ 585
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 194018503 969 QLERLRQDMK---------------IQKLKEQ-----ETTGMLQAQLQETQQELKEaAQQHRDDLAAfQKDKLDLQ 1024
Cdd:COG3096 586 QLEQLRARIKelaarapawlaaqdaLERLREQsgealADSQEVTAAMQQLLERERE-ATVERDELAA-RKQALESQ 659
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1611-2304 |
3.41e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 3.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1611 EERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVlqkERIQVLEDQRTLQ 1690
Cdd:TIGR02169 205 REREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLE---EIEQLLEELNKKI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1691 TKILEEDLEQIKHSLRERSQELASQwqlvheraddgkspskgqRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQ 1770
Cdd:TIGR02169 282 KDLGEEEQLRVKEKIGELEAEIASL------------------ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELER 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1771 QLQGLHRKVGETSLLLTHREQETATLQQHLQE-AKEQGELREQV--LQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEE 1847
Cdd:TIGR02169 344 EIEEERKRRDKLTEEYAELKEELEDLRAELEEvDKEFAETRDELkdYREKLEKLKREINELKRELDRLQEELQRLSEELA 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1848 SMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDL--RAESREHEKAVLALQQRCAE 1925
Cdd:TIGR02169 424 DLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVekELSKLQRELAEAEAQARASE 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1926 QAQEHEAEARTLQDSWLQAQATLTEQ-----EQELAAL------RAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKE 1994
Cdd:TIGR02169 504 ERVRGGRAVEEVLKASIQGVHGTVAQlgsvgERYATAIevaagnRLNNVVVEDDAVAKEAIELLKRRKAGRATFLPLNKM 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1995 QSLLEQAELSHTLEASTAALQ-ATLDTCQASA-----------RQLEEALRIReGEIQAQALQHhevtqhlqqelcqkke 2062
Cdd:TIGR02169 584 RDERRDLSILSEDGVIGFAVDlVEFDPKYEPAfkyvfgdtlvvEDIEAARRLM-GKYRMVTLEG---------------- 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2063 elrQLLEKAGA--------RRSQENGIQEKQSLEQ--ERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPA 2132
Cdd:TIGR02169 647 ---ELFEKSGAmtggsrapRGGILFSRSEPAELQRlrERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEK 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2133 EKPALQPLPAQ--QELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVL-----ERESEQQRL 2205
Cdd:TIGR02169 724 EIEQLEQEEEKlkERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLShsripEIQAELSKL 803
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2206 QEELVLSRQALEEQQSGGPHSTSRADQGPKVGQGSQSGEVETEpspgvEEKERLTQRLERLQQAVAELEVDRSKLQCHNA 2285
Cdd:TIGR02169 804 EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLK-----EQIKSIEKEIENLNGKKEELEEELEELEAALR 878
|
730
....*....|....*....
gi 194018503 2286 QLRTALEQVERERRKLKRD 2304
Cdd:TIGR02169 879 DLESRLGDLKKERDELEAQ 897
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
760-1198 |
4.93e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 52.08 E-value: 4.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 760 RAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLK----- 834
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEkllql 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 835 LELDAERTRAEQEWDAVARQLAQAEQEGQ--ASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETK 912
Cdd:COG4717 128 LPLYQELEALEAELAELPERLEELEERLEelRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 913 LREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQ 992
Cdd:COG4717 208 LAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 993 AQLQETQQELKEAAQQHRDDLAAFQKDKLdlqkQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASL 1072
Cdd:COG4717 288 LLFLLLAREKASLGKEAEELQALPALEEL----EEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEEL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1073 ALSLVEKEKRLLiLQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAR-EAQLLEELEASRVAEQ 1151
Cdd:COG4717 364 QLEELEQEIAAL-LAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdEEELEEELEELEEELE 442
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 194018503 1152 QLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQpENQAQAQLASL 1198
Cdd:COG4717 443 ELEEELEELREELAELEAELEQLEEDGELAELLQE-LEELKAELREL 488
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
653-872 |
5.03e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 5.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 653 SRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHL 732
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 733 EQLHQDAERQEETLARAVQEKEALV----RERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVT 808
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194018503 809 KGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTRAE---QEWDAVARQLAQAEQEGQASLERQKVA 872
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAelqQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1581-1888 |
5.43e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 51.75 E-value: 5.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1581 KVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQE 1660
Cdd:pfam10174 241 KISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNS 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1661 QLAQALERKGQELVLQKERiqvledqrtlqTKILEEDLEQIKHSLRERSQELASQWQLVHERADDgkspSKGQRGSLEHL 1740
Cdd:pfam10174 321 DCKQHIEVLKESLTAKEQR-----------AAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEE----KSTLAGEIRDL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1741 KLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEA-------KEQGELREQV 1813
Cdd:pfam10174 386 KDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKeriierlKEQREREDRE 465
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 1814 LQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEEL 1888
Cdd:pfam10174 466 RLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQL 540
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1878-2157 |
7.26e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 7.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1878 REQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRcaeqaqeheAEARTLQDSWLQAQATLTEQEQELAA 1957
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRL---------AEYSWDEIDVASAEREIAELEAELER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1958 LRAENQYSRRQEEaAVSQAEALQEALSKAQAALQEKEQSL-LEQAELSHTLEASTAALQATLDTCQASARQLEEALRIRE 2036
Cdd:COG4913 680 LDASSDDLAALEE-QLEELEAELEELEEELDELKGEIGRLeKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAA 758
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2037 GEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLtvAQREEEI 2116
Cdd:COG4913 759 LGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDGL--PEYEERF 836
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 194018503 2117 LMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTE 2157
Cdd:COG4913 837 KELLNENSIEFVADLLSKLRRAIREIKERIDPLNDSLKRIP 877
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1783-2002 |
8.47e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 8.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1783 SLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ 1862
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1863 AHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQdswl 1942
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA---- 163
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1943 QAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAE 2002
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAE 223
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1446-2116 |
1.01e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.22 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1446 REREVETLQAEV-QELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIR 1524
Cdd:TIGR02169 185 NIERLDLIIDEKrQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1525 ELENDREAQRSVLEHQLLDLEQKAQV------------IESQRGQIQDLKKQLGTLECLALELEESHHKVESQqkmITEL 1592
Cdd:TIGR02169 265 KRLEEIEQLLEELNKKIKDLGEEEQLrvkekigeleaeIASLERSIAEKERELEDAEERLAKLEAEIDKLLAE---IEEL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1593 EGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQE 1672
Cdd:TIGR02169 342 EREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEE 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1673 LVLQKERIQVLEDQRT----------LQTKILEEDLEQIKHSLRERSQELaSQWQLVHERADDGKSPSKGQRGSLEHLKL 1742
Cdd:TIGR02169 422 LADLNAAIAGIEAKINeleeekedkaLEIKKQEWKLEQLAADLSKYEQEL-YDLKEEYDRVEKELSKLQRELAEAEAQAR 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1743 ILRDKEKEVECQQERIQE-------LQGHMGQLEQQLQGL----------------------------HRKVGETSLLLT 1787
Cdd:TIGR02169 501 ASEERVRGGRAVEEVLKAsiqgvhgTVAQLGSVGERYATAievaagnrlnnvvveddavakeaiellkRRKAGRATFLPL 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1788 HREQETATLQQHLQEAKEQGE------------------LREQVLQGQLEEAQR-------------------------- 1823
Cdd:TIGR02169 581 NKMRDERRDLSILSEDGVIGFavdlvefdpkyepafkyvFGDTLVVEDIEAARRlmgkyrmvtlegelfeksgamtggsr 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1824 --------------DLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELE 1889
Cdd:TIGR02169 661 aprggilfsrsepaELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLE 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1890 VEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAE-QAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQ 1968
Cdd:TIGR02169 741 ELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKlEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQK 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1969 EEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEI---QAQALQ 2045
Cdd:TIGR02169 821 LNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERdelEAQLRE 900
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 194018503 2046 HHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETrrllESLKELQLTVAQREEEI 2116
Cdd:TIGR02169 901 LERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE----LSLEDVQAELQRVEEEI 967
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1609-2175 |
1.12e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1609 DLEERSQELQAQSSQLHEL-ENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQR 1687
Cdd:COG4913 239 RAHEALEDAREQIELLEPIrELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1688 TLqtkiLEEDLEQIKHSLRErsqelasqwqlvheraddgkspSKGQRgsLEHLklilrdkEKEVECQQERIQELQGHMGQ 1767
Cdd:COG4913 319 DA----LREELDELEAQIRG----------------------NGGDR--LEQL-------EREIERLERELEERERRRAR 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1768 LEQQLQGLHRKVGETslllthrEQETATLQQHLQEAKEQgelreqvLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEE 1847
Cdd:COG4913 364 LEALLAALGLPLPAS-------AEEFAALRAEAAALLEA-------LEEELEALEEALAEAEAALRDLRRELRELEAEIA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1848 SMKLKTSALQAALEQAHATLKErqgELEEHREQVRRLQEELEVEGRQVR---ALEEVLGDLRAE---SREHEKAVLA--- 1918
Cdd:COG4913 430 SLERRKSNIPARLLALRDALAE---ALGLDEAELPFVGELIEVRPEEERwrgAIERVLGGFALTllvPPEHYAAALRwvn 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1919 -------LQQRCAEQAQEHEAEARTLQDS--------------WLQAQ----------ATLTEQEQELAALRAENQYS-- 1965
Cdd:COG4913 507 rlhlrgrLVYERVRTGLPDPERPRLDPDSlagkldfkphpfraWLEAElgrrfdyvcvDSPEELRRHPRAITRAGQVKgn 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1966 ----------------------RRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTcqa 2023
Cdd:COG4913 587 gtrhekddrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDV--- 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2024 saRQLEEALRIREGEIQAQALQHHEVTQhLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLK 2103
Cdd:COG4913 664 --ASAEREIAELEAELERLDASSDDLAA-LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAE 740
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 194018503 2104 ELQlTVAQREEEILMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAR-EIEWREKAQDLALSLA 2175
Cdd:COG4913 741 DLA-RLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADLE 812
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
655-1127 |
1.18e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.88 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 655 VEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEelkDKLSEAHHQQETATAHLEQ 734
Cdd:pfam05483 196 ILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKE---NKMKDLTFLLEESRDKANQ 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 735 LHQDAERQEETLARAVQEKEALVRERAALEVRLQ-------AVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVI-- 805
Cdd:pfam05483 273 LEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQrsmstqkALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVvt 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 806 --QVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEeevNRLQEK 883
Cdd:pfam05483 353 efEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDE---KKQFEK 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 884 WEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQkEL 963
Cdd:pfam05483 430 IAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQ-EA 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 964 ADASQQLERLRQDMKIQKLKE----------QETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQ 1033
Cdd:pfam05483 509 SDMTLELKKHQEDIINCKKQEermlkqienlEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQ 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1034 LVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEK----ENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQE 1109
Cdd:pfam05483 589 MKILENKCNNLKKQIENKNKNIEELHQENKALKKkgsaENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKI 668
|
490
....*....|....*...
gi 194018503 1110 GQRELGVQVELLRQEVKE 1127
Cdd:pfam05483 669 SEEKLLEEVEKAKAIADE 686
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1599-2322 |
1.34e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 50.72 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1599 QRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQ------ERDQEVTSQRQQIDELQKQQEQLAQALERKGQE 1672
Cdd:COG3096 290 LRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQaasdhlNLVQTALRQQEKIERYQEDLEELTERLEEQEEV 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1673 LVLQKERIQVLEDQRTLQtkilEEDLEQIKHSLRERSQEL------ASQWQLVHERADDGKS----PSKGQRGSLEHLkL 1742
Cdd:COG3096 370 VEEAAEQLAEAEARLEAA----EEEVDSLKSQLADYQQALdvqqtrAIQYQQAVQALEKARAlcglPDLTPENAEDYL-A 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1743 ILRDKEKEVECQ----QERIQELQGHMGQLEQQLQGLHRKVGETSlllthREQETATLQQHLQEAKEQGEL--REQVLQG 1816
Cdd:COG3096 445 AFRAKEQQATEEvlelEQKLSVADAARRQFEKAYELVCKIAGEVE-----RSQAWQTARELLRRYRSQQALaqRLQQLRA 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1817 QLEEAQRDLAQRdHELETLRQEKQQTQDQE-------ESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELE 1889
Cdd:COG3096 520 QLAELEQRLRQQ-QNAERLLEEFCQRIGQQldaaeelEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELA 598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1890 VEGRQVRALEEVLGDLRAESREHEKAVLALQQrCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAenqysrrqe 1969
Cdd:COG3096 599 ARAPAWLAAQDALERLREQSGEALADSQEVTA-AMQQLLEREREATVERDELAARKQALESQIERLSQPGG--------- 668
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1970 eAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALqaTLDTCQASARQLE------EALRIREGEIQAQA 2043
Cdd:COG3096 669 -AEDPRLLALAERLGGVLLSEIYDDVTLEDAPYFSALYGPARHAI--VVPDLSAVKEQLAgledcpEDLYLIEGDPDSFD 745
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2044 LQHHEVTQhLQQELCQKKEElRQLL------EKAGARRSQENGIQEkqsLEQERQEETRRLLESLKELQLTvaQREEEIL 2117
Cdd:COG3096 746 DSVFDAEE-LEDAVVVKLSD-RQWRysrfpeVPLFGRAAREKRLEE---LRAERDELAEQYAKASFDVQKL--QRLHQAF 818
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2118 mlrEASSPRHRALpaekpALQPLPAQqELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEitMFLQASVLE 2197
Cdd:COG3096 819 ---SQFVGGHLAV-----AFAPDPEA-ELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNK--LLPQANLLA 887
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2198 RESEQQR---LQEELVLSRQALEEQQSGGPHSTSRADQGPKVGQGSQSGE-VETEPSPGVEEKERLTQRLERLQQAVAEL 2273
Cdd:COG3096 888 DETLADRleeLREELDAAQEAQAFIQQHGKALAQLEPLVAVLQSDPEQFEqLQADYLQAKEQQRRLKQQIFALSEVVQRR 967
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 194018503 2274 E----VDRSKLQCHNA----QLRTALEQVERERRKLkRDSVRASRAGSLEARETMTS 2322
Cdd:COG3096 968 PhfsyEDAVGLLGENSdlneKLRARLEQAEEARREA-REQLRQAQAQYSQYNQVLAS 1023
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
958-1197 |
1.34e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 958 RTQKELADASQQLERLRQDMKIQKLKEQEttgmLQAQLQETQQELKEAAQQhrddLAAFQKDKLDLQKQVEDLMSQLVAH 1037
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKA----LLKQLAALERRIAALARR----IRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1038 DDSQRLVKEEIEEKVKVAQECSRIQKELEKENASlalSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQ 1117
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPE---DFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1118 VELLRQEVKEKEadfvareaQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLAS 1197
Cdd:COG4942 173 RAELEALLAELE--------EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
660-1184 |
1.87e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.02 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 660 QLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDa 739
Cdd:TIGR04523 117 EQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNK- 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 740 ERQEETLARAVQEKEALVREraaLEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVI----QVTKGQLEVQ 815
Cdd:TIGR04523 196 LLKLELLLSNLKKKIQKNKS---LESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLkdeqNKIKKQLSEK 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 816 IQTIIQAKEVI---QGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQE---KWEKERS 889
Cdd:TIGR04523 273 QKELEQNNKKIkelEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEqisQLKKELT 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 890 WLQQELDKTLETLERERAELETKLREQQTEMEAIRA-------------QREEERSQADSALYQMQLET---EKERVSLL 953
Cdd:TIGR04523 353 NSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNlesqindleskiqNQEKLNQQKDEQIKKLQQEKellEKEIERLK 432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 954 ETLLRTQKELADASQQ----------LERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQhrddLAAFQKDKLDL 1023
Cdd:TIGR04523 433 ETIIKNNSEIKDLTNQdsvkeliiknLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKE----LKKLNEEKKEL 508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1024 QKQVEDLMSQLVAHDDSQRLVKEEIEEKvkvAQECSRIQKELEKENASLALSLVEKEKRLLilqeadsvrQQELSSLRQD 1103
Cdd:TIGR04523 509 EEKVKDLTKKISSLKEKIEKLESEKKEK---ESKISDLEDELNKDDFELKKENLEKEIDEK---------NKEIEELKQT 576
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1104 IQEAQEGQRElgvqvelLRQEVKEKEADFVAreaqLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVA 1183
Cdd:TIGR04523 577 QKSLKKKQEE-------KQELIDQKEKEKKD----LIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQ 645
|
.
gi 194018503 1184 E 1184
Cdd:TIGR04523 646 E 646
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
836-958 |
2.36e-05 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 49.69 E-value: 2.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 836 ELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQ--QELDKTLETLERERAELETKL 913
Cdd:COG0542 415 ELERRLEQLEIEKEALKKEQDEASFERLAELRDELAELEEELEALKARWEAEKELIEeiQELKEELEQRYGKIPELEKEL 494
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 914 REQQTEMEAIRAQREEERSQADSA----------LYQMqLETEKERVSLLETLLR 958
Cdd:COG0542 495 AELEEELAELAPLLREEVTEEDIAevvsrwtgipVGKL-LEGEREKLLNLEEELH 548
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
657-980 |
2.38e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.95 E-value: 2.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 657 AAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGT------REEKEELKDKL-------SEAHH 723
Cdd:COG3096 296 GARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQekieryQEDLEELTERLeeqeevvEEAAE 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 724 QQETATAHLEQLHQDAERQEETLA-----------RAVQEKEALVRERAAlEVRLQAVERDRQDLTEHVLGLRSAKEQLE 792
Cdd:COG3096 376 QLAEAEARLEAAEEEVDSLKSQLAdyqqaldvqqtRAIQYQQAVQALEKA-RALCGLPDLTPENAEDYLAAFRAKEQQAT 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 793 SNLFEAQQQNSVIQVTKGQLEVQIQTIIQ-AKEVIQGEV----KCLKLELDAERTRAEQEwDAVARQLAQAEQEgqasLE 867
Cdd:COG3096 455 EEVLELEQKLSVADAARRQFEKAYELVCKiAGEVERSQAwqtaRELLRRYRSQQALAQRL-QQLRAQLAELEQR----LR 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 868 RQKVAhEEEVNRLQEKWEKERSW------LQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQA------D 935
Cdd:COG3096 530 QQQNA-ERLLEEFCQRIGQQLDAaeeleeLLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARApawlaaQ 608
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 194018503 936 SALYQMQ------LETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQ 980
Cdd:COG3096 609 DALERLReqsgeaLADSQEVTAAMQQLLEREREATVERDELAARKQALESQ 659
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
276-938 |
2.62e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.84 E-value: 2.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 276 EKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEASLSRNAQEEKLSLQQVIKAITQALASVE 355
Cdd:pfam12128 242 EFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDR 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 356 EEdtvtqssghedslqsdcnglsqfdpqdpdraltlVQSVLTRRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALR 435
Cdd:pfam12128 322 SE----------------------------------LEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALT 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 436 EKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVDSLSRErELLQKARGELQQQLEVLEQEAWRLRRMN 515
Cdd:pfam12128 368 GKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQ-ALESELREQLEAGKLEFNEEEYRLKSRL 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 516 MELQLQGDSAQGEKlEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARA 595
Cdd:pfam12128 447 GELKLRLNQATATP-ELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDEL 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 596 EQSIVELSGS-ENSLKAEVADLRAAAVKLGALNEALALDKV-ELNQQLLQLEQENQSLCSRVEaaeqlrsalQVDLAEAE 673
Cdd:pfam12128 526 ELQLFPQAGTlLHFLRKEAPDWEQSIGKVISPELLHRTDLDpEVWDGSVGGELNLYGVKLDLK---------RIDVPEWA 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 674 RRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEK 753
Cdd:pfam12128 597 ASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAER 676
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 754 EALVRER-AALEVRLQAVERDRQDLTEHVLGlrsakEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKC 832
Cdd:pfam12128 677 KDSANERlNSLEAQLKQLDKKHQAWLEEQKE-----QKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKA 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 833 LKLELDAERTRAEQEWDAVARqLAQAEQEGQASLERQKVaHEEEVNR----LQEKWEKERswlqQELDKTLETLERERAE 908
Cdd:pfam12128 752 LETWYKRDLASLGVDPDVIAK-LKREIRTLERKIERIAV-RRQEVLRyfdwYQETWLQRR----PRLATQLSNIERAISE 825
|
650 660 670
....*....|....*....|....*....|
gi 194018503 909 LETKLREQQTEMEAIRAQREEERSQADSAL 938
Cdd:pfam12128 826 LQQQLARLIADTKLRRAKLEMERKASEKQQ 855
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
867-1464 |
2.73e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.84 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 867 ERQKVAHEEEVNRLQEKWEKERSWLQQELDKtLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETE 946
Cdd:pfam12128 229 DIQAIAGIMKIRPEFTKLQQEFNTLESAELR-LSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELN 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 947 KERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQ 1026
Cdd:pfam12128 308 GELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1027 VEDLMSQLVAHDDSQRlvkeeiEEKVKVAQECSRIQKELEKEnasLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQE 1106
Cdd:pfam12128 388 NNRDIAGIKDKLAKIR------EARDRQLAVAEDDLQALESE---LREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1107 AQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRAsLWAQEAKATQLQLQLRSTESQLEAlvaeqq 1186
Cdd:pfam12128 459 TPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEA-LRQASRRLEERQSALDELELQLFP------ 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1187 PENQAQAQLASLCSVLQQALGSACEsrPELRGGGDSAPTLWGPDPDQnGASRLFKRWSLPTALSPEAVALAlQKLHQDVW 1266
Cdd:pfam12128 532 QAGTLLHFLRKEAPDWEQSIGKVIS--PELLHRTDLDPEVWDGSVGG-ELNLYGVKLDLKRIDVPEWAASE-EELRERLD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1267 KARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESEL-RDLHETAASLQSRLRQA 1345
Cdd:pfam12128 608 KAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKnKALAERKDSANERLNSL 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1346 ELQKmeAQNDRELLQASKEKLSAQVEHlqacvaeAQAQADAAAVLEEDLRTARSALKlknEELESERERAQALQEQGELK 1425
Cdd:pfam12128 688 EAQL--KQLDKKHQAWLEEQKEQKREA-------RTEKQAYWQVVEGALDAQLALLK---AAIAARRSGAKAELKALETW 755
|
570 580 590
....*....|....*....|....*....|....*....
gi 194018503 1426 VAQGKAlqeNLALLAQTLSNREREVETLQAEVQELEKQR 1464
Cdd:pfam12128 756 YKRDLA---SLGVDPDVIAKLKREIRTLERKIERIAVRR 791
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
245-493 |
3.02e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 3.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 245 LLLLVAKTQALEKEAHEKSQELMQLKSHGDLEKAELQDRVTELSALLTQSQKQNE---DYEKMVKALRETMEILETNHAE 321
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERriaALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 322 LMEHEASLSRNAQEEKLSLQQVIKAItqalasveeedtvtQSSGHEDSLQSdcnGLSQFDPQDPDRALTLVQSVLTRRQQ 401
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAELLRAL--------------YRLGRQPPLAL---LLSPEDFLDAVRRLQYLKYLAPARRE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 402 AVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGERDALAGQTVDLQGEVD 481
Cdd:COG4942 151 QAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
250
....*....|..
gi 194018503 482 SLSRERELLQKA 493
Cdd:COG4942 231 RLEAEAAAAAER 242
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
867-1155 |
3.04e-05 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 48.76 E-value: 3.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 867 ERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREE----ERSQADSALYQMQ 942
Cdd:pfam13868 32 KRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIEEREQKRQEEYEeklqEREQMDEIVERIQ 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 943 LETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKE-------QETTGMLQAQLQETQQELKEAAQQHRDDLAA 1015
Cdd:pfam13868 112 EEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEderileyLKEKAEREEEREAEREEIEEEKEREIARLRA 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1016 FQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLliLQEADSVRQQ 1095
Cdd:pfam13868 192 QQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQAREEQIELKERRLAEEAERE--EEEFERMLRK 269
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1096 ELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRA 1155
Cdd:pfam13868 270 QAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERLREEEAERRE 329
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1580-2300 |
3.08e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.68 E-value: 3.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1580 HKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHEL--------ENHSTHLAKELQERDQEVTSQRQQ 1651
Cdd:TIGR02169 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELnkkikdlgEEEQLRVKEKIGELEAEIASLERS 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1652 IDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTlQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSK 1731
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIE-EERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELK 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1732 GQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELRE 1811
Cdd:TIGR02169 389 DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1812 Q---VLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVR-----R 1883
Cdd:TIGR02169 469 QelyDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEvaagnR 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1884 LQ----EELEVEGRQVRALEEV---------LGDLRAESRE----HEKAVL-----------------------ALQQRC 1923
Cdd:TIGR02169 549 LNnvvvEDDAVAKEAIELLKRRkagratflpLNKMRDERRDlsilSEDGVIgfavdlvefdpkyepafkyvfgdTLVVED 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1924 AEQAQEHEAEAR--TLQDSWLQAQATLT-------EQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKE 1994
Cdd:TIGR02169 629 IEAARRLMGKYRmvTLEGELFEKSGAMTggsraprGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELS 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1995 QSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQqELCQKKEELRQLLEKAGAR 2074
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE-ELEEDLHKLEEALNDLEAR 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2075 RSQEnGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKpaLQPLPAQQELERLQTALR 2154
Cdd:TIGR02169 788 LSHS-RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLK--EQIKSIEKEIENLNGKKE 864
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2155 QTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERESEQQRLQEELVLSRQALEEQQSggphstSRADQGP 2234
Cdd:TIGR02169 865 ELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE------ELSEIED 938
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2235 KVGQGSQSGEVETEPSPGVEEKERLTQRLERL--------------QQAVAELEVDRSKLQCHNAQLRTALEQVERERRK 2300
Cdd:TIGR02169 939 PKGEDEEIPEEELSLEDVQAELQRVEEEIRALepvnmlaiqeyeevLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1879-2420 |
3.63e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.45 E-value: 3.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1879 EQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTeqeQELAAL 1958
Cdd:pfam12128 237 MKIRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELN---GELSAA 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1959 RAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLleQAELShtleastaALQATLDTCQASARQLEEALRIREge 2038
Cdd:pfam12128 314 DAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSW--QSELE--------NLEERLKALTGKHQDVTAKYNRRR-- 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2039 iQAQALQHHEVTQHLQQELCQKKEEL-RQLLEKAGARRSQENGIQEK-QSLEQERQEETRRLLESLKEL--QLTVAQREE 2114
Cdd:pfam12128 382 -SKIKEQNNRDIAGIKDKLAKIREARdRQLAVAEDDLQALESELREQlEAGKLEFNEEEYRLKSRLGELklRLNQATATP 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2115 EILMLREASSPRHRALPAEKPAlqplpAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQAS 2194
Cdd:pfam12128 461 ELLLQLENFDERIERAREEQEA-----ANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGT 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2195 VLEreseqqrlqeelVLSRQALEEQQSGG----PHSTSRADQGPKVGQGSQSGE------------VETEPSPGVEE--K 2256
Cdd:pfam12128 536 LLH------------FLRKEAPDWEQSIGkvisPELLHRTDLDPEVWDGSVGGElnlygvkldlkrIDVPEWAASEEelR 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2257 ERLTQRLERLQQAVAELEVDRSKLQCHNAQLRTALEQVERERRKLKRDSVRASRAGSLEARETMTsspTQQDGRGSQRGS 2336
Cdd:pfam12128 604 ERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDK---KNKALAERKDSA 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2337 SDSVLVVELQREVALLRAQLALERKQRQDYIARS--VQTSRELAGLHHSLSHSLLTvAQAPEATVLEAETRKLDESLNQS 2414
Cdd:pfam12128 681 NERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTekQAYWQVVEGALDAQLALLKA-AIAARRSGAKAELKALETWYKRD 759
|
....*.
gi 194018503 2415 LTSPGP 2420
Cdd:pfam12128 760 LASLGV 765
|
|
| MutS2 |
COG1193 |
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair]; |
864-1004 |
4.21e-05 |
|
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair];
Pssm-ID: 440806 [Multi-domain] Cd Length: 784 Bit Score: 48.98 E-value: 4.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 864 ASLERQKVAHEEEvnrlqekwekerswlqqeldktLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQL 943
Cdd:COG1193 521 EELERERRELEEE----------------------REEAERLREELEKLREELEEKLEELEEEKEEILEKAREEAEEILR 578
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 194018503 944 ETEKErvslLETLLRTQKELADASQQLERLRQDMK--IQKLKEQETTGMLQAQLQETQQELKE 1004
Cdd:COG1193 579 EARKE----AEELIRELREAQAEEEELKEARKKLEelKQELEEKLEKPKKKAKPAKPPEELKV 637
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1272-1894 |
4.31e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.96 E-value: 4.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1272 RDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELR----DLHETAASLQSRL----- 1342
Cdd:pfam15921 305 QEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARterdQFSQESGNLDDQLqklla 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1343 ----RQAELQKMEAQNDRelLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRT--------ARSALKLKNEELEs 1410
Cdd:pfam15921 385 dlhkREKELSLEKEQNKR--LWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSecqgqmerQMAAIQGKNESLE- 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1411 ereRAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKqremqkaALELLSLDLKKRSREVDlqqe 1490
Cdd:pfam15921 462 ---KVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKER-------AIEATNAEITKLRSRVD---- 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1491 qiqeleqcrsvlehlpMAVQEReQKLSVQRDQIRELENDREAQRsvlehqlLDLEQKAQVIESQRGQIQDLKKQLGTLEC 1570
Cdd:pfam15921 528 ----------------LKLQEL-QHLKNEGDHLRNVQTECEALK-------LQMAEKDKVIEILRQQIENMTQLVGQHGR 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1571 LALELeeshhKVESQQkmiteLEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQ 1650
Cdd:pfam15921 584 TAGAM-----QVEKAQ-----LEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQ 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1651 qidelqkqqeqlaqalerkgqelvlqkERIQVLEDQRTLQTKI--LEEDLEQIKHSLRERSQELASqwqlvheraddgks 1728
Cdd:pfam15921 654 ---------------------------ERDQLLNEVKTSRNELnsLSEDYEVLKRNFRNKSEEMET-------------- 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1729 pskgqrgSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVgetslllTHREQETATLQ---QHLQEAKE 1805
Cdd:pfam15921 693 -------TTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQI-------TAKRGQIDALQskiQFLEEAMT 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1806 QGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELE-EHREQVR-R 1883
Cdd:pfam15921 759 NANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQrQEQESVRlK 838
|
650
....*....|.
gi 194018503 1884 LQEELEVEGRQ 1894
Cdd:pfam15921 839 LQHTLDVKELQ 849
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1767-1995 |
4.78e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 4.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1767 QLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELRE---QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQ 1843
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALArriRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1844 DQEESMklkTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRC 1923
Cdd:COG4942 104 EELAEL---LRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 194018503 1924 AEQAQEHEaeartlqdswlQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQ 1995
Cdd:COG4942 181 AELEEERA-----------ALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1925-2221 |
4.84e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 48.75 E-value: 4.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1925 EQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEaLQEALSKAQAALQEKEQSLLEQAELS 2004
Cdd:PRK11281 73 DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQ-LESRLAQTLDQLQNAQNDLAEYNSQL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2005 HTLEASTAALQATLDTCQASARQLEEALriREGEIQAQALQHHEVTQHL--QQELCQKKEELRQLLEkagarrsqenGIQ 2082
Cdd:PRK11281 152 VSLQTQPERAQAALYANSQRLQQIRNLL--KGGKVGGKALRPSQRVLLQaeQALLNAQNDLQRKSLE----------GNT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2083 EKQSLEQERQEetrrlleslkELQLTVAQREEEILMLREASSPRHRALpAEKPAlqplpaqQELERLQTALRQTEAREIe 2162
Cdd:PRK11281 220 QLQDLLQKQRD----------YLTARIQRLEHQLQLLQEAINSKRLTL-SEKTV-------QEAQSQDEAARIQANPLV- 280
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 194018503 2163 wrekAQDLALSLAQSKASISSLQEITMFLQAS-----VLERESEQQR--------LQEELVLSRQALEEQQS 2221
Cdd:PRK11281 281 ----AQELEINLQLSQRLLKATEKLNTLTQQNlrvknWLDRLTQSERnikeqisvLKGSLLLSRILYQQQQA 348
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
763-1008 |
4.85e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 4.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 763 LEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQvtkgqLEVQIQTIIQAKEVIQGEVkclkLELDAERT 842
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVD-----LSEEAKLLLQQLSELESQL----AEARAELA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 843 RAEQEWDAVARQLAQAEQEGQASLErqkvaheeevnrlqekwekerSWLQQELDKTLETLERERAELETKLREQQTEMEA 922
Cdd:COG3206 237 EAEARLAALRAQLGSGPDALPELLQ---------------------SPVIQQLRAQLAELEAELAELSARYTPNHPDVIA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 923 IRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDM-KIQKLK-EQETTGMLQAQLQETQQ 1000
Cdd:COG3206 296 LRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEaELRRLErEVEVARELYESLLQRLE 375
|
....*...
gi 194018503 1001 ELKEAAQQ 1008
Cdd:COG3206 376 EARLAEAL 383
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
544-1067 |
5.62e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.52 E-value: 5.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 544 ERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKL 623
Cdd:PRK03918 189 ENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERI 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 624 GALNEalaldKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQaE 703
Cdd:PRK03918 269 EELKK-----EIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE-E 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 704 LRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERqeetlaRAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLG 783
Cdd:PRK03918 343 LKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKR------LTGLTPEKLEKELEELEKAKEEIEEEISKITARIGE 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 784 LRSAKEQLESNLFEAQQQNSVIQVTKGQL-------------------EVQIQTIIQAKEVIQGEVKCLKLELDAERTRA 844
Cdd:PRK03918 417 LKKEIKELKKAIEELKKAKGKCPVCGRELteehrkelleeytaelkriEKELKEIEEKERKLRKELRELEKVLKKESELI 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 845 EQEwdAVARQLAQAEQE-GQASLERQKVAHE--EEVNRLQEKWEKERSWLQQELDK-------------TLETLERERAE 908
Cdd:PRK03918 497 KLK--ELAEQLKELEEKlKKYNLEELEKKAEeyEKLKEKLIKLKGEIKSLKKELEKleelkkklaelekKLDELEEELAE 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 909 LETKLREQQTEMEairaQREEERSQADSALYQMQLE---TEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQ 985
Cdd:PRK03918 575 LLKELEELGFESV----EELEERLKELEPFYNEYLElkdAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELE 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 986 EttgMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLvahddsqRLVKEEIEEKVKVAQECSRIQKEL 1065
Cdd:PRK03918 651 E---LEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTL-------EKLKEELEEREKAKKELEKLEKAL 720
|
..
gi 194018503 1066 EK 1067
Cdd:PRK03918 721 ER 722
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1635-2084 |
7.09e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 48.41 E-value: 7.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1635 AKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERiqvledqrtlqTKILEEDLEQIKHSLRERSQELAS 1714
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEA-----------ESDLEQDYQAASDHLNLVQTALRQ 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1715 QWQLvhERAddgkspskgqRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLThrEQETA 1794
Cdd:PRK04863 347 QEKI--ERY----------QADLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALD--VQQTR 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1795 TLQ-QHLQEAKEQGelreqvlQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAAL---EQAHATLKER 1870
Cdd:PRK04863 413 AIQyQQAVQALERA-------KQLCGLPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHsqfEQAYQLVRKI 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1871 QGELEehREQVRRLQEELEVEGRQVRALEEVLGDLRAESREhekavlaLQQRCAEQAQeheaeARTLQDSWLQAQATLTE 1950
Cdd:PRK04863 486 AGEVS--RSEAWDVARELLRRLREQRHLAEQLQQLRMRLSE-------LEQRLRQQQR-----AERLLAEFCKRLGKNLD 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1951 QEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEE 2030
Cdd:PRK04863 552 DEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTE 631
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 194018503 2031 AlriregeIQAQALQHHEVTQ---HLQQELCQKKEELRQLLEKAGARRSQENGIQEK 2084
Cdd:PRK04863 632 Y-------MQQLLERERELTVerdELAARKQALDEEIERLSQPGGSEDPRLNALAER 681
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1252-1464 |
8.89e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.99 E-value: 8.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1252 EAVALALQKLHQDVWKARQARDDLRDQVQKLvqrltdteAQKSQVHSELQDLQRQLSQSQEEKSKW-----EGRQNSLES 1326
Cdd:COG4913 224 FEAADALVEHFDDLERAHEALEDAREQIELL--------EPIRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1327 ELRDLHETAASLQSRLRQAELQKMEAQNDRELLQAS--------KEKLSAQVEHLQAcvaEAQAQADAAAVLEEDLRTAR 1398
Cdd:COG4913 296 ELEELRAELARLEAELERLEARLDALREELDELEAQirgnggdrLEQLEREIERLER---ELEERERRRARLEALLAALG 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 194018503 1399 SALKLKNEELESERERAQALQEQGElkvAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQR 1464
Cdd:COG4913 373 LPLPASAEEFAALRAEAAALLEALE---EELEALEEALAEAEAALRDLRRELRELEAEIASLERRK 435
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1302-1870 |
1.01e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.75 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1302 DLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQ 1381
Cdd:PRK03918 190 NIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1382 AQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVaqgkaLQENLALLAQTLSNREREVETLQAEVQELE 1461
Cdd:PRK03918 270 ELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEK-----RLSRLEEEINGIEERIKELEEKEERLEELK 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1462 KQREMQKAALEllslDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQERE-QKLSVQRDQIRELENDREAQRSVLEHQ 1540
Cdd:PRK03918 345 KKLKELEKRLE----ELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKElEELEKAKEEIEEEISKITARIGELKKE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1541 LLDLEQKAQVIESQRGQIQDLKKQLgTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHL--TLDLEERSQELQ 1618
Cdd:PRK03918 421 IKELKKAIEELKKAKGKCPVCGREL-TEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELekVLKKESELIKLK 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1619 AQSSQLHELENH-STHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQ---ELVLQKERIQVLEDQRTLQTKIL 1694
Cdd:PRK03918 500 ELAEQLKELEEKlKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEElkkKLAELEKKLDELEEELAELLKEL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1695 EEDLEQIKHSLRERSQELasqwqlvhERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQG 1774
Cdd:PRK03918 580 EELGFESVEELEERLKEL--------EPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEE 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1775 LHRKVGETslllTHREQEtatlQQHLQEAKEQGELREQV--LQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKlK 1852
Cdd:PRK03918 652 LEKKYSEE----EYEELR----EEYLELSRELAGLRAELeeLEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALE-R 722
|
570
....*....|....*...
gi 194018503 1853 TSALQAALEQAHATLKER 1870
Cdd:PRK03918 723 VEELREKVKKYKALLKER 740
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
783-1209 |
1.16e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.64 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 783 GLRSAKEQLESNLFEAQQQNSVIQVTK------GQLEVQIQTIIQAKEVIQGEVKCLKLELDAErtrAEQEWDAVARQLA 856
Cdd:COG3096 226 GVRKAFQDMEAALRENRMTLEAIRVTQsdrdlfKHLITEATNYVAADYMRHANERRELSERALE---LRRELFGARRQLA 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 857 qAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQ--QELDKTLETLERERAELEtKLREQQTEMEAIRAQREEERSQA 934
Cdd:COG3096 303 -EEQYRLVEMARELEELSARESDLEQDYQAASDHLNlvQTALRQQEKIERYQEDLE-ELTERLEEQEEVVEEAAEQLAEA 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 935 DSALYQMQLETEKERVSL--LETLLRTQKELADASQQ----LERLRQ-----DMKIQKLKEQETTgmLQAQLQETQQELK 1003
Cdd:COG3096 381 EARLEAAEEEVDSLKSQLadYQQALDVQQTRAIQYQQavqaLEKARAlcglpDLTPENAEDYLAA--FRAKEQQATEEVL 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1004 EAAQQHRD-DLAAFQKDK-LDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQEcsriqkelekenASLALSLVEKEK 1081
Cdd:COG3096 459 ELEQKLSVaDAARRQFEKaYELVCKIAGEVERSQAWQTARELLRRYRSQQALAQRL------------QQLRAQLAELEQ 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1082 RLLILQEADSVRQQELSSLRQDIQEAQEGQRELgVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQL--RASLW- 1158
Cdd:COG3096 527 RLRQQQNAERLLEEFCQRIGQQLDAAEELEELL-AELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELaaRAPAWl 605
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 1159 AQEAKATQLQLQLRST-----------ESQLEALVAEQQPENQAQAQLASL---CSVLQQALGSA 1209
Cdd:COG3096 606 AAQDALERLREQSGEAladsqevtaamQQLLEREREATVERDELAARKQALesqIERLSQPGGAE 670
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
588-1024 |
1.22e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 47.64 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 588 VAAALARAEQSIVELSGSENSLKAEVADLRaaaVKLGALNEALaldkvelnqqllqleqenQSLCSRVEAAEQLRSALQV 667
Cdd:PRK04863 270 VAADYMRHANERRVHLEEALELRRELYTSR---RQLAAEQYRL------------------VEMARELAELNEAESDLEQ 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 668 DLaEAERRREALWEKKTQLETQLQKAEEAGAELQAELrgtrEEKEELkdkLSEAHHQQETATAHLEQLHQDAERQEETLA 747
Cdd:PRK04863 329 DY-QAASDHLNLVQTALRQQEKIERYQADLEELEERL----EEQNEV---VEEADEQQEENEARAEAAEEEVDELKSQLA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 748 RAVQEKEALVRERAALEVRLQAVERDRQ-----DLTEHVLG-----LRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQ 817
Cdd:PRK04863 401 DYQQALDVQQTRAIQYQQAVQALERAKQlcglpDLTADNAEdwleeFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQ 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 818 TIIQakevIQGEVkclkleldaERTRAEQEWDAVARQL----AQAEQEGQAsleRQKVAHEEEVNRLQEKWEKERSWLQQ 893
Cdd:PRK04863 481 LVRK----IAGEV---------SRSEAWDVARELLRRLreqrHLAEQLQQL---RMRLSELEQRLRQQQRAERLLAEFCK 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 894 ELDKTLET---LERERAELETKLREQQTEMEAIRAQREEERSQadsalyQMQLETEKERVSLLETLLRTqkeladASQQL 970
Cdd:PRK04863 545 RLGKNLDDedeLEQLQEELEARLESLSESVSEARERRMALRQQ------LEQLQARIQRLAARAPAWLA------AQDAL 612
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 194018503 971 ERLRQdmkiQKLKEQETTGMLQAQLQETQQELKEaAQQHRDDLAAfQKDKLDLQ 1024
Cdd:PRK04863 613 ARLRE----QSGEEFEDSQDVTEYMQQLLERERE-LTVERDELAA-RKQALDEE 660
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
590-1010 |
1.23e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 590 AALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALAldKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDL 669
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELE--ELREELEKLEKLLQLLPLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 670 AEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEElkdklseahhQQETATAHLEQLHQDAERQEETLARA 749
Cdd:COG4717 149 EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEE----------ELQDLAEELEELQQRLAELEEELEEA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 750 VQEKEALVRERAALEVRLQAVERDRQDLTEH----VLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEV 825
Cdd:COG4717 219 QEELEELEEELEQLENELEAAALEERLKEARllllIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 826 IQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLE-- 903
Cdd:COG4717 299 SLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLae 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 904 ---------RERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLET-LLRTQKELADASQQLERL 973
Cdd:COG4717 379 agvedeeelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEeLEELEEELEELREELAEL 458
|
410 420 430
....*....|....*....|....*....|....*..
gi 194018503 974 RQdmKIQKLKEQETTGMLQAQLQETQQELKEAAQQHR 1010
Cdd:COG4717 459 EA--ELEQLEEDGELAELLQELEELKAELRELAEEWA 493
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1812-2043 |
1.29e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.75 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1812 QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVE 1891
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1892 GRQVRALEEVLG-----------DLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRA 1960
Cdd:COG3883 99 GGSVSYLDVLLGsesfsdfldrlSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1961 ENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQ 2040
Cdd:COG3883 179 EQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAA 258
|
...
gi 194018503 2041 AQA 2043
Cdd:COG3883 259 AGS 261
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
900-1531 |
1.35e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.48 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 900 ETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLlrtQKELADASQQLERLRQDMKI 979
Cdd:pfam01576 6 EMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEM---RARLAARKQELEEILHELES 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 980 QKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQK---DKLDLQKQVEDLMSQLVAHDDSQRLVKEEieekvkvaq 1056
Cdd:pfam01576 83 RLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKlqlEKVTTEAKIKKLEEDILLLEDQNSKLSKE--------- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1057 ecsriQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGV---QVELLRQEVKEKEADFV 1133
Cdd:pfam01576 154 -----RKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKakrKLEGESTDLQEQIAELQ 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1134 AREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSAcesR 1213
Cdd:pfam01576 229 AQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEAL---K 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1214 PELRGGGDSAPTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQdvwkarQARDDLRDQVQKLVQRLTDTEAQK 1293
Cdd:pfam01576 306 TELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHT------QALEELTEQLEQAKRNKANLEKAK 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1294 SQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLhetaaslQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHL 1373
Cdd:pfam01576 380 QALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQEL-------QARLSESERQRAELAEKLSKLQSELESVSSLLNEA 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1374 QAcvaeaqaqadAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETL 1453
Cdd:pfam01576 453 EG----------KNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTL 522
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194018503 1454 QAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDRE 1531
Cdd:pfam01576 523 QAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLE 600
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1390-1565 |
1.38e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1390 LEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKA 1469
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1470 ALELLSLDLKKRSR----EVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLE 1545
Cdd:COG4942 105 ELAELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELE 184
|
170 180
....*....|....*....|
gi 194018503 1546 QKAQVIESQRGQIQDLKKQL 1565
Cdd:COG4942 185 EERAALEALKAERQKLLARL 204
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1255-1715 |
1.48e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1255 ALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQ-EEKSKWEGRQNSLESELRDLHE 1333
Cdd:COG4913 280 ALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGgDRLEQLEREIERLERELEERER 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1334 TAASLQSRLRQAELQkmeaqndrelLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERE 1413
Cdd:COG4913 360 RRARLEALLAALGLP----------LPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIA 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1414 RAQALqeqgelKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKA--------ALELL----------- 1474
Cdd:COG4913 430 SLERR------KSNIPARLLALRDALAEALGLDEAELPFVGELIEVRPEEERWRGAiervlggfALTLLvppehyaaalr 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1475 ---SLDLKKR--SREVDLQQEQIQELEQ--------------------------------CRSV--LEHLPMAV------ 1509
Cdd:COG4913 504 wvnRLHLRGRlvYERVRTGLPDPERPRLdpdslagkldfkphpfrawleaelgrrfdyvcVDSPeeLRRHPRAItragqv 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1510 ---QEREQKlsvqRDQIRELEN-----DREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHH- 1580
Cdd:COG4913 584 kgnGTRHEK----DDRRRIRSRyvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWd 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1581 --KVESQQKMITELEGQREmqrvalthltlDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQ 1658
Cdd:COG4913 660 eiDVASAEREIAELEAELE-----------RLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEE 728
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 194018503 1659 QEQLAQALERKGQELVLqkERIQVLEDQrtLQTKILEEDLEQIKHSLRERSQELASQ 1715
Cdd:COG4913 729 LDELQDRLEAAEDLARL--ELRALLEER--FAAALGDAVERELRENLEERIDALRAR 781
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1796-2040 |
1.65e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.93 E-value: 1.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1796 LQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEEsmklkTSALQAALEQAHATLKERQGELE 1875
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEE-----AKLLLQQLSELESQLAEARAELA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1876 EHREQVRRLQEELEVEGRQVRALEEvlgdlraesrehEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQEL 1955
Cdd:COG3206 237 EAEARLAALRAQLGSGPDALPELLQ------------SPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALR 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1956 AALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIR 2035
Cdd:COG3206 305 AQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEALT 384
|
....*
gi 194018503 2036 EGEIQ 2040
Cdd:COG3206 385 VGNVR 389
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1275-1707 |
2.17e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1275 LRDQVQKLVQRLTDTEAQKSQVHSELQDLqrqLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRlrQAELQKMEAQN 1354
Cdd:TIGR04523 230 LKDNIEKKQQEINEKTTEISNTQTQLNQL---KDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQL--KSEISDLNNQK 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1355 DRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALK-LKNEELESERERAQALQEQGELKVAQGKALQ 1433
Cdd:TIGR04523 305 EQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTnSESENSEKQRELEEKQNEIEKLKKENQSYKQ 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1434 ENLALLAQTlSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEhlpMAVQERE 1513
Cdd:TIGR04523 385 EIKNLESQI-NDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKE---LIIKNLD 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1514 QKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKM----I 1589
Cdd:TIGR04523 461 NTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEkeskI 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1590 TELEGQREMQRVALTHLtlDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERK 1669
Cdd:TIGR04523 541 SDLEDELNKDDFELKKE--NLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKE 618
|
410 420 430
....*....|....*....|....*....|....*...
gi 194018503 1670 GQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRE 1707
Cdd:TIGR04523 619 LEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1406-2108 |
2.19e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.89 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1406 EELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREM-----QKAALELLSLDLKK 1480
Cdd:TIGR00618 225 EKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERinrarKAAPLAAHIKAVTQ 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1481 RSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIEsqrgqiqd 1560
Cdd:TIGR00618 305 IEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHT-------- 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1561 LKKQLGTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQE 1640
Cdd:TIGR00618 377 LTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKL 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1641 RDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEdLEQIKHSLRERSQELASQWQLVH 1720
Cdd:TIGR00618 457 EKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIH-PNPARQDIDNPGPLTRRMQRGEQ 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1721 ERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERI---QELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQ 1797
Cdd:TIGR00618 536 TYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSiltQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQH 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1798 QHLQEAKEQGELRE--QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQ--EESMKLKTSALQAALEQAHATLKERQGE 1873
Cdd:TIGR00618 616 ALLRKLQPEQDLQDvrLHLQQCSQELALKLTALHALQLTLTQERVREHALsiRVLPKELLASRQLALQKMQSEKEQLTYW 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1874 LEEHREQVRRLQEELEVEG---RQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTE 1950
Cdd:TIGR00618 696 KEMLAQCQTLLRELETHIEeydREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQ 775
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1951 QEQELAALRAENQYSRRQEEAAVSQaeaLQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLee 2030
Cdd:TIGR00618 776 TGAELSHLAAEIQFFNRLREEDTHL---LKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQ-- 850
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2031 alriregeiqaqaLQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEK--QSLEQERQEETRRLLESLKELQLT 2108
Cdd:TIGR00618 851 -------------LLKYEECSKQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDalIKFLHEITLYANVRLANQSEGRFH 917
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1817-2209 |
2.24e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1817 QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLK--ERQGELEEHREQVRRLQEELEVEGRQ 1894
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAELPERLEELEER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1895 VRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVS 1974
Cdd:COG4717 155 LEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1975 QAEALQE---------------ALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEI 2039
Cdd:COG4717 235 ELEAAALeerlkearlllliaaALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALE 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2040 QAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGI--QEKQSLEQERQEETRRLLESLK----ELQLTVAQRE 2113
Cdd:COG4717 315 ELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAeeLEEELQLEELEQEIAALLAEAGvedeEELRAALEQA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2114 EEILMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEitmflQA 2193
Cdd:COG4717 395 EEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEE-----DG 469
|
410
....*....|....*.
gi 194018503 2194 SVLERESEQQRLQEEL 2209
Cdd:COG4717 470 ELAELLQELEELKAEL 485
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1737-1957 |
2.36e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1737 LEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQG 1816
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1817 QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQahatLKERQGELEEHREQVRRLQEELEVEGRQVR 1896
Cdd:COG4942 109 LLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEE----LRADLAELAALRAELEAERAELEALLAELE 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 194018503 1897 ALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAA 1957
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1250-1469 |
2.75e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.44 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1250 SPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQL-SQSQEEKSKWEGRQnsLESEL 1328
Cdd:PRK11281 53 LLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNdEETRETLSTLSLRQ--LESRL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1329 RDLHETAASLQSRLRQAELQKMEAQNDRELLQASkekLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSA----LKLK 1404
Cdd:PRK11281 131 AQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAA---LYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAeqalLNAQ 207
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 194018503 1405 NE----ELESERERAQALQEQGELKVAQGKALQENLALLaQTLSNREREVETlQAEVQELEKQREMQKA 1469
Cdd:PRK11281 208 NDlqrkSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLL-QEAINSKRLTLS-EKTVQEAQSQDEAARI 274
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1269-1869 |
2.85e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.17 E-value: 2.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1269 RQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQ 1348
Cdd:TIGR04523 116 KEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNK 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1349 KMEAQNDRELLQASKEK---LSAQVEHLQacvaeaqaqaDAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELK 1425
Cdd:TIGR04523 196 LLKLELLLSNLKKKIQKnksLESQISELK----------KQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKI 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1426 VAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREmqkaalELLSLDLKKRSREVDLQqeqiqeleqcrsvLEHL 1505
Cdd:TIGR04523 266 KKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE------QDWNKELKSELKNQEKK-------------LEEI 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1506 PMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEEshhKVESQ 1585
Cdd:TIGR04523 327 QNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLES---KIQNQ 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1586 QKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQA 1665
Cdd:TIGR04523 404 EKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQN 483
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1666 LERKGQELVLQKERIQVLedqrTLQTKILEE---DLEQIKHSLRERSQELASQwqlvheraddgKSPSKGQRGSLEHlKL 1742
Cdd:TIGR04523 484 LEQKQKELKSKEKELKKL----NEEKKELEEkvkDLTKKISSLKEKIEKLESE-----------KKEKESKISDLED-EL 547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1743 ILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKvgetslllthreqetatlQQHLQEAKEQGELREQVLQGQLEEAQ 1822
Cdd:TIGR04523 548 NKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKK------------------QEEKQELIDQKEKEKKDLIKEIEEKE 609
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 194018503 1823 RDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKE 1869
Cdd:TIGR04523 610 KKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1748-2002 |
2.87e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.49 E-value: 2.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1748 EKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLL-THREQETATLQQHLQEAKEQGEL--REQVLQGQLEEAQRD 1824
Cdd:PRK04863 850 ERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLAdETLADRVEEIREQLDEAEEAKRFvqQHGNALAQLEPIVSV 929
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1825 LAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALE-QAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLG 1903
Cdd:PRK04863 930 LQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQrRAHFSYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLR 1009
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1904 DLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQ----EQELAALRAENQYSRRQEEAAVSQAEAL 1979
Cdd:PRK04863 1010 QAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERararRDELHARLSANRSRRNQLEKQLTFCEAE 1089
|
250 260
....*....|....*....|...
gi 194018503 1980 QEALSKAQAALQEKEQSLLEQAE 2002
Cdd:PRK04863 1090 MDNLTKKLRKLERDYHEMREQVV 1112
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1440-1679 |
2.88e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1440 AQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEqiqeleqcrsvlehlpmAVQEREQKLSVQ 1519
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALAR-----------------RIRALEQELAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1520 RDQIRELENDREAQRSVLEHQLLDLEQKAQVIEsQRGQIQDLKKQLGTLECLALELEESHHK--VESQQKMITELEGQRE 1597
Cdd:COG4942 82 EAELAELEKEIAELRAELEAQKEELAELLRALY-RLGRQPPLALLLSPEDFLDAVRRLQYLKylAPARREQAEELRADLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1598 MQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQK 1677
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
..
gi 194018503 1678 ER 1679
Cdd:COG4942 241 ER 242
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
694-1471 |
2.93e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.58 E-value: 2.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 694 EEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLH-QDAERQEETLARAVQEKEALVRERAALEVRLQ-AVE 771
Cdd:TIGR00606 318 ERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQeHIRARDSLIQSLATRLELDGFERGPFSERQIKnFHT 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 772 RDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELdaertraeQEWDAV 851
Cdd:TIGR00606 398 LVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKEL--------QQLEGS 469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 852 ARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELE-TKLREQQTEMEAIRAQREEE 930
Cdd:TIGR00606 470 SDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNhHTTTRTQMEMLTKDKMDKDE 549
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 931 R-------------SQADSALYQMQLET-----EKERVSLLETLLRTQKELADASQQLERLRQDMKI---------QKLK 983
Cdd:TIGR00606 550 QirkiksrhsdeltSLLGYFPNKKQLEDwlhskSKEINQTRDRLAKLNKELASLEQNKNHINNELESkeeqlssyeDKLF 629
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 984 EQETTGMLQAQLQETQQELKEAAQQhRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQK 1063
Cdd:TIGR00606 630 DVCGSQDEESDLERLKEEIEKSSKQ-RAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAP 708
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1064 ELEKENASLalsLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEadfvareaqlleEL 1143
Cdd:TIGR00606 709 DKLKSTESE---LKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQE------------TL 773
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1144 EASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENqaqaqlasLCSVLQQALGSACESRPELRGGGDSA 1223
Cdd:TIGR00606 774 LGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSD--------LDRTVQQVNQEKQEKQHELDTVVSKI 845
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1224 PTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQdvwkARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDL 1303
Cdd:TIGR00606 846 ELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQ----FEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKD 921
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1304 QRQ----LSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQA-ELQKMEAQNDRELLQASKEKLSAQVEHLQACVA 1378
Cdd:TIGR00606 922 QQEkeelISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGkDDYLKQKETELNTVNAQLEECEKHQEKINEDMR 1001
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1379 EAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQaevQ 1458
Cdd:TIGR00606 1002 LMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQ---K 1078
|
810
....*....|...
gi 194018503 1459 ELEKQREMQKAAL 1471
Cdd:TIGR00606 1079 GYEKEIKHFKKEL 1091
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1584-1828 |
3.03e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 3.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1584 SQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLA 1663
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1664 QALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHslrersqelasqwqlvheRADDGKSPSKGQRGSLEHLKLI 1743
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVR------------------RLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1744 LRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQgelrEQVLQGQLEEAQR 1823
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE----AEELEALIARLEA 234
|
....*
gi 194018503 1824 DLAQR 1828
Cdd:COG4942 235 EAAAA 239
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1606-1863 |
3.14e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 3.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1606 LTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLED 1685
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1686 QRtlqtKILEEDLEQIKHSLRERSQELAsqwqlvheraddgkspskgQRGSLEHLKLILRDkeKEVECQQERIQELQGHM 1765
Cdd:COG4942 91 EI----AELRAELEAQKEELAELLRALY-------------------RLGRQPPLALLLSP--EDFLDAVRRLQYLKYLA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1766 GQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQgelrEQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQ 1845
Cdd:COG4942 146 PARREQAEELRADLAELAALRAELEAERAELEALLAELEEE----RAALEALKAERQKLLARLEKELAELAAELAELQQE 221
|
250
....*....|....*...
gi 194018503 1846 EESMKLKTSALQAALEQA 1863
Cdd:COG4942 222 AEELEALIARLEAEAAAA 239
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
793-1122 |
3.34e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.06 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 793 SNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEvIQGEVKCLK------LELDAERTRAEQEWDAVARQLAQAEQEGQASl 866
Cdd:PRK11281 22 LSSAFARAASNGDLPTEADVQAQLDALNKQKL-LEAEDKLVQqdleqtLALLDKIDRQKEETEQLKQQLAQAPAKLRQA- 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 867 erqkvahEEEVNRLQEKwekerswLQQELDKTLETLERerAELETKLREQQTEMEaiRAQreEERSQADSALYQMQLETE 946
Cdd:PRK11281 100 -------QAELEALKDD-------NDEETRETLSTLSL--RQLESRLAQTLDQLQ--NAQ--NDLAEYNSQLVSLQTQPE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 947 kervslletllRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQ 1026
Cdd:PRK11281 160 -----------RAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQ 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1027 VEDLMSQLVAHDDSQRLVKEEIEEK-VKVAQECSRIQKELEKENASLALSLVEKE--------KRLLI-LQEADSVRQQE 1096
Cdd:PRK11281 229 RDYLTARIQRLEHQLQLLQEAINSKrLTLSEKTVQEAQSQDEAARIQANPLVAQEleinlqlsQRLLKaTEKLNTLTQQN 308
|
330 340
....*....|....*....|....*.
gi 194018503 1097 LsSLRQDIQEAQEGQRELGVQVELLR 1122
Cdd:PRK11281 309 L-RVKNWLDRLTQSERNIKEQISVLK 333
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1277-1983 |
3.85e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.98 E-value: 3.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1277 DQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKwegRQNSLESELRDLHETAASLQSRLRQ-AELQKMEAQND 1355
Cdd:pfam12128 244 TKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQE---TSAELNQLLRTLDDQWKEKRDELNGeLSAADAAVAKD 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1356 RELLQASKEKLSAqveHLQACVAEAQAQAdaaavleEDLRTARSALKLKNEELESERERAQALQEQGELKVAqgKALQEN 1435
Cdd:pfam12128 321 RSELEALEDQHGA---FLDADIETAAADQ-------EQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRS--KIKEQN 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1436 LALLAQTLSNREREVET-----------LQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEH 1504
Cdd:pfam12128 389 NRDIAGIKDKLAKIREArdrqlavaeddLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLEN 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1505 LPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTL--------ECLALELE 1576
Cdd:pfam12128 469 FDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQagtllhflRKEAPDWE 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1577 ESHHKVESQQ-----KMITELEGQREMQRVALTHLTLDLEE-------------------RSQELQAQSSQLHELENHST 1632
Cdd:pfam12128 549 QSIGKVISPEllhrtDLDPEVWDGSVGGELNLYGVKLDLKRidvpewaaseeelrerldkAEEALQSAREKQAAAEEQLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1633 HLAKELQERDQEVT-----------SQRQQIDELQKQQEQLAQALERKGQELVlqkERIQVLEDQRTLQTKILEEDLEQI 1701
Cdd:pfam12128 629 QANGELEKASREETfartalknarlDLRRLFDEKQSEKDKKNKALAERKDSAN---ERLNSLEAQLKQLDKKHQAWLEEQ 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1702 KHSLRERSQELASQWQLVHERADDgkspskgQRGSLEHLKLILRD--KEKEVECQQERIQELQGhMGQLEQQLQGLHRKV 1779
Cdd:pfam12128 706 KEQKREARTEKQAYWQVVEGALDA-------QLALLKAAIAARRSgaKAELKALETWYKRDLAS-LGVDPDVIAKLKREI 777
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1780 GETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAA 1859
Cdd:pfam12128 778 RTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVR 857
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1860 LEQAHATLKERQGELEEHREQVRRLQEELEVeGRQVRALEEVLgdlraesREHEKAVLALQQRCAEQAQEHEAEART-LQ 1938
Cdd:pfam12128 858 LSENLRGLRCEMSKLATLKEDANSEQAQGSI-GERLAQLEDLK-------LKRDYLSESVKKYVEHFKNVIADHSGSgLA 929
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 194018503 1939 DSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEAL 1983
Cdd:pfam12128 930 ETWESLREEDHYQNDKGIRLLDYRKLVPYLEQWFDVRVPQSIMVL 974
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
836-1659 |
3.94e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 3.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 836 ELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLRE 915
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 916 QQTEMEAIRAQREEERSQADSALYQMQLETEKErvslletlLRTQKEL--ADASQQLERLRQDMKIQKLKEQETTgmlqa 993
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAARKAEEVRKAEE--------LRKAEDArkAEAARKAEEERKAEEARKAEDAKKA----- 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 994 qlqetqQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDdSQRLVKEEIEEKVKVAQecsrIQKELEKENASLA 1073
Cdd:PTZ00121 1227 ------EAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHF-ARRQAAIKAEEARKADE----LKKAEEKKKADEA 1295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1074 LSLVEKEKRLLILQEADSVRQQElsSLRQDIQEAQEGQRELGVQVEllrqEVKEKEADFVAREAQLLEELEASRvaEQQL 1153
Cdd:PTZ00121 1296 KKAEEKKKADEAKKKAEEAKKAD--EAKKKAEEAKKKADAAKKKAE----EAKKAAEAAKAEAEAAADEAEAAE--EKAE 1367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1154 RASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPELRGGGDS---APTLWGPD 1230
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAkkkAEEAKKAD 1447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1231 PDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQvhselqdlqRQLSQS 1310
Cdd:PTZ00121 1448 EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKA---------DEAKKA 1518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1311 QEEKSKWEGRQnsleSELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVL 1390
Cdd:PTZ00121 1519 EEAKKADEAKK----AEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARI 1594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1391 EEDLRTARSALKLKNEEL---ESERERAQALQEQGELK--VAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQRE 1465
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAEEAkkaEEAKIKAEELKKAEEEKkkVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDK 1674
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1466 MQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEhqlldle 1545
Cdd:PTZ00121 1675 KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAE------- 1747
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1546 qKAQVIESQRGQIQDLKKQlgtleclaLELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLH 1625
Cdd:PTZ00121 1748 -EAKKDEEEKKKIAHLKKE--------EEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGN 1818
|
810 820 830
....*....|....*....|....*....|....*
gi 194018503 1626 ELENHSTHL-AKELQERDQEVTSQRQQIDELQKQQ 1659
Cdd:PTZ00121 1819 LVINDSKEMeDSAIKEVADSKNMQLEEADAFEKHK 1853
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1057-1806 |
4.17e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1057 ECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVARE 1136
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1137 AQLLEELEASRVAEQQLRASLwAQEAKATQLQLQLRSTESQLEALVAeQQPENQAQAQLASLCSVLQQAlgSACESRPEL 1216
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEA-ARKAEEVRKAEELRKAEDARKAEAA-RKAEEERKAEEARKAEDAKKA--EAVKKAEEA 1235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1217 RgggdsaptlwgpdPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDdlRDQVQKLVQRLTDTEAQKSqv 1296
Cdd:PTZ00121 1236 K-------------KDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARK--ADELKKAEEKKKADEAKKA-- 1298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1297 hselqdlqrqlsqsqEEKSKWEgrqnslesELRDLHETAaslqsrlRQAELQKMEAQNDRELLQASKEKLSAQVEHLQAC 1376
Cdd:PTZ00121 1299 ---------------EEKKKAD--------EAKKKAEEA-------KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAA 1348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1377 VAEAQAQADAAAVLEEDLRTAR----------SALKLKNEEL----------ESERERAQALQEQGELKV----AQGKAL 1432
Cdd:PTZ00121 1349 KAEAEAAADEAEAAEEKAEAAEkkkeeakkkaDAAKKKAEEKkkadeakkkaEEDKKKADELKKAAAAKKkadeAKKKAE 1428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1433 QENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLD-LKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQE 1511
Cdd:PTZ00121 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADeAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1512 REQKlsvqrDQIRELENDREAQ--RSVLEHQLLDLEQKAQviesQRGQIQDLKKQLGTLECLALELEESHHKVESQQKMI 1589
Cdd:PTZ00121 1509 KKKA-----DEAKKAEEAKKADeaKKAEEAKKADEAKKAE----EKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMA 1579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1590 TELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERk 1669
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEE- 1658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1670 gQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEK 1749
Cdd:PTZ00121 1659 -NKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKK 1737
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 194018503 1750 EVECQQERIQELQGHMGQlEQQLQglHRKVGETSLLLTHREQETATLQQHLQEAKEQ 1806
Cdd:PTZ00121 1738 EAEEDKKKAEEAKKDEEE-KKKIA--HLKKEEEKKAEEIRKEKEAVIEEELDEEDEK 1791
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1694-1922 |
4.33e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 4.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1694 LEEDLEQIKHSLRERSQELASQwqlvheraddgkspskgqRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQ 1773
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAAL------------------KKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1774 GLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLA-------QRDHELETLRQEKQQTQDQE 1846
Cdd:COG4942 87 ELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQylkylapARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 194018503 1847 ESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQR 1922
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1275-1843 |
4.45e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.73 E-value: 4.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1275 LRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQlSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQ--AELQKMEA 1352
Cdd:TIGR00618 305 IEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQ-QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQqhTLTQHIHT 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1353 -QNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKA 1431
Cdd:TIGR00618 384 lQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQE 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1432 LQENLALLAQTLSNrereVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQE 1511
Cdd:TIGR00618 464 SAQSLKEREQQLQT----KEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQ 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1512 REQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLgtleclalelEESHHKVESQQKMITE 1591
Cdd:TIGR00618 540 LETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNIT----------VRLQDLTEKLSEAEDM 609
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1592 LEGQREMQRVALTHlTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQK--QQEQLAQALERK 1669
Cdd:TIGR00618 610 LACEQHALLRKLQP-EQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELlaSRQLALQKMQSE 688
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1670 GQELVLQKERI-QVLEDQRTLQTKILEED--LEQIKHSLRERSQELASQWQLVHERAddgKSPSKGQRGSLEHLKLILRD 1746
Cdd:TIGR00618 689 KEQLTYWKEMLaQCQTLLRELETHIEEYDreFNEIENASSSLGSDLAAREDALNQSL---KELMHQARTVLKARTEAHFN 765
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1747 KEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLA 1826
Cdd:TIGR00618 766 NNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLG 845
|
570
....*....|....*..
gi 194018503 1827 QRDHELETLRQEKQQTQ 1843
Cdd:TIGR00618 846 EITHQLLKYEECSKQLA 862
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
819-965 |
5.09e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.15 E-value: 5.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 819 IIQAKEviqgEVKCLKLELDAERTRAEQEWDAVARQLAQAEQegqaSLERQKVAHEEEVNRLQEKwekerswlQQELDKT 898
Cdd:PRK12704 59 LLEAKE----EIHKLRNEFEKELRERRNELQKLEKRLLQKEE----NLDRKLELLEKREEELEKK--------EKELEQK 122
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194018503 899 LETLERERAELETKLREQQTEMEAIRA-QREEERSQadsALYQMQLETEKERVSLLETLLRTQKELAD 965
Cdd:PRK12704 123 QQELEKKEEELEELIEEQLQELERISGlTAEEAKEI---LLEKVEEEARHEAAVLIKEIEEEAKEEAD 187
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1434-1994 |
5.11e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.44 E-value: 5.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1434 ENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALE-------LLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLP 1506
Cdd:PRK03918 165 KNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEevlreinEISSELPELREELEKLEKEVKELEELKEEIEELE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1507 MAVQEREQKLSVQRDQIRELENDREaqrsvlehqllDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQ 1586
Cdd:PRK03918 245 KELESLEGSKRKLEEKIRELEERIE-----------ELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1587 KMITELEGQREmqrvalthltlDLEERSQELQAQSSQLHELENHSTHLAK---ELQERDQEVTSQRQQIDELQKQQEQLA 1663
Cdd:PRK03918 314 KRLSRLEEEIN-----------GIEERIKELEEKEERLEELKKKLKELEKrleELEERHELYEEAKAKKEELERLKKRLT 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1664 ----QALERKGQELVLQKERIQvlEDQRTLQTKILEedLEQIKHSLRERSQELASQwqlvheradDGKSPSKGQRGSLEH 1739
Cdd:PRK03918 383 gltpEKLEKELEELEKAKEEIE--EEISKITARIGE--LKKEIKELKKAIEELKKA---------KGKCPVCGRELTEEH 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1740 LKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTH-------REQETATLQQHLQEAKEQGELREQ 1812
Cdd:PRK03918 450 RKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLkelaeqlKELEEKLKKYNLEELEKKAEEYEK 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1813 VLQ--GQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ----AHATLKERQGELEEH--------- 1877
Cdd:PRK03918 530 LKEklIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEElgfeSVEELEERLKELEPFyneylelkd 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1878 -REQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEqaQEHEaeartlqdswlQAQATLTEQEQELA 1956
Cdd:PRK03918 610 aEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE--EEYE-----------ELREEYLELSRELA 676
|
570 580 590
....*....|....*....|....*....|....*...
gi 194018503 1957 ALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKE 1994
Cdd:PRK03918 677 GLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELE 714
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
892-1132 |
6.09e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 6.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 892 QQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLetekerVSLLETLLRTQKELADASQQLE 971
Cdd:COG3206 170 REEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQL------SELESQLAEARAELAEAEARLA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 972 RLRQDMK-----IQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKdkldLQKQVEDLMSQLVahddsqrlvke 1046
Cdd:COG3206 244 ALRAQLGsgpdaLPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIA----LRAQIAALRAQLQ----------- 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1047 eiEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEadsvRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVK 1126
Cdd:COG3206 309 --QEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPE----LEAELRRLEREVEVARELYESLLQRLEEARLAEA 382
|
....*.
gi 194018503 1127 EKEADF 1132
Cdd:COG3206 383 LTVGNV 388
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1924-2116 |
6.55e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 6.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1924 AEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQsllEQAEL 2003
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK---EIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2004 SHTLEASTAALQATLDTCQASARQLEEALRIREGEIqAQALQHHEVTQHLQQELCQKKEELRQLLEK-AGARRSQENGIQ 2082
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPEDF-LDAVRRLQYLKYLAPARREQAEELRADLAElAALRAELEAERA 174
|
170 180 190
....*....|....*....|....*....|....
gi 194018503 2083 EKQSLEQERQEETRRLLESLKELQLTVAQREEEI 2116
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKEL 208
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
865-1085 |
6.76e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 6.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 865 SLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELEtklrEQQTEMEAIRAQrEEERSQADSALYQ--MQ 942
Cdd:PHA02562 192 HIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIE----ELTDELLNLVMD-IEDPSAALNKLNTaaAK 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 943 LETEKERVSLLETLLRTQKELADASQQLERlrQDMKIQKLKEQETTGMLQ-AQLQETQQELKEAAqqhrDDLAAFQKDKL 1021
Cdd:PHA02562 267 IKSKIEQFQKVIKMYEKGGVCPTCTQQISE--GPDRITKIKDKLKELQHSlEKLDTAIDELEEIM----DEFNEQSKKLL 340
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194018503 1022 DLQKQVEDLMSQLVAHDDSQRLVKEEIE----EKVKVAQECSRIQKELEKENASLALSLVEKEKRLLI 1085
Cdd:PHA02562 341 ELKNKISTNKQSLITLVDKAKKVKAAIEelqaEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIV 408
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1585-1890 |
6.98e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.11 E-value: 6.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1585 QQKMITELEGQREMQRVALTHLTLDLEERSQELQ-------AQSSQLHELENHSTHLAKELQ---ERDQEVtsQRQQIDE 1654
Cdd:pfam17380 280 HQKAVSERQQQEKFEKMEQERLRQEKEEKAREVErrrkleeAEKARQAEMDRQAAIYAEQERmamEREREL--ERIRQEE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1655 LQKQQEQLAQalerkgQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQR 1734
Cdd:pfam17380 358 RKRELERIRQ------EEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1735 GSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHR----EQETATLQQHLQEAKE---QG 1807
Cdd:pfam17380 432 ARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRkraeEQRRKILEKELEERKQamiEE 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1808 ELREQVLQGQLEEAQRDLAQRDHELETlRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEE 1887
Cdd:pfam17380 512 ERKRKLLEKEMEERQKAIYEEERRREA-EEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARAE 590
|
...
gi 194018503 1888 LEV 1890
Cdd:pfam17380 591 YEA 593
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1267-1645 |
7.16e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.03 E-value: 7.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1267 KARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAE 1346
Cdd:PRK02224 360 ELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTAR 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1347 LQKMEAQndrELLQASKEKLSAQVEHLQACVAEAQAQADAAavleEDLRTARSALKLKNEELESERERAQALQE---QGE 1423
Cdd:PRK02224 440 ERVEEAE---ALLEAGKCPECGQPVEGSPHVETIEEDRERV----EELEAELEDLEEEVEEVEERLERAEDLVEaedRIE 512
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1424 LKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLE 1503
Cdd:PRK02224 513 RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE 592
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1504 HLPMAVQERE------QKLSVQRDQIRELENDREAQRSVLEHQLLDLEQK--AQVIESQRGQIQDLKKQLGTLECLALEL 1575
Cdd:PRK02224 593 RIRTLLAAIAdaedeiERLREKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDEL 672
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1576 EESHHKVESQQKMITELEGQREMQRVALTHLtldlEERSQELQAQSSQLHELENHSTHLAKELQERDQEV 1645
Cdd:PRK02224 673 REERDDLQAEIGAVENELEELEELRERREAL----ENRVEALEALYDEAEELESMYGDLRAELRQRNVET 738
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
686-827 |
7.39e-04 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 44.82 E-value: 7.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 686 LETQLQKAEEAGAELQAELRGTREEKEELKDKLSEahhQQETATAHLEQLHQDAerqEETLARAVQEKEALVRERAALEv 765
Cdd:PRK00409 525 LEELERELEQKAEEAEALLKEAEKLKEELEEKKEK---LQEEEDKLLEEAEKEA---QQAIKEAKKEADEIIKELRQLQ- 597
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 194018503 766 RLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVtkGQlEVQIQTIIQAKEVIQ 827
Cdd:PRK00409 598 KGGYASVKAHELIEARKRLNKANEKKEKKKKKQKEKQEELKV--GD-EVKYLSLGQKGEVLS 656
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1630-1977 |
7.86e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.73 E-value: 7.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1630 HSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKI------LEEDLEQIKH 1703
Cdd:pfam17380 276 HIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQermameRERELERIRQ 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1704 SLRERSQElasqwqlvheraddgkspskgqrgslehlklilRDKEKEVECQQERIQELQghMGQLEQQlQGLHRKVGETS 1783
Cdd:pfam17380 356 EERKRELE---------------------------------RIRQEEIAMEISRMRELE--RLQMERQ-QKNERVRQELE 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1784 LLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKlktsaLQAALEQA 1863
Cdd:pfam17380 400 AARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLR-----QQEEERKR 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1864 HATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGD--LRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSW 1941
Cdd:pfam17380 475 KKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRklLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRI 554
|
330 340 350
....*....|....*....|....*....|....*.
gi 194018503 1942 LQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAE 1977
Cdd:pfam17380 555 QEQMRKATEERSRLEAMEREREMMRQIVESEKARAE 590
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1810-2115 |
1.01e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.12 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1810 REQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELE 1889
Cdd:pfam07888 28 RAELLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELS 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1890 VEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQE 1969
Cdd:pfam07888 108 ASSEELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEEL 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1970 EAAVSQAEALQEALSKAQAA---LQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQH 2046
Cdd:pfam07888 188 RSLSKEFQELRNSLAQRDTQvlqLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQR 267
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2047 HEVTQHLQQELCQKKEELRQLLEKAGA-RRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEE 2115
Cdd:pfam07888 268 DRTQAELHQARLQAAQLTLQLADASLAlREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQEE 337
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
839-1073 |
1.02e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 839 AERTRAEQEWDAVARQLAQAEQEgQASLERQKVAHEEEVNRLQEKwekerswlQQELDKTLETLERERAELETKLREQQT 918
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKE-LAALKKEEKALLKQLAALERR--------IAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 919 EMEAIRAQREEERSQADSALYQMQLETEKERVSLL---ETLLRTQKELADASQQLERLRQDMKIQKlKEQETTGMLQAQL 995
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLALLlspEDFLDAVRRLQYLKYLAPARREQAEELR-ADLAELAALRAEL 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194018503 996 QETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHddsqrlvKEEIEEKVKVAQECSRIQKELEKENASLA 1073
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAEL-------AAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| CagA_N |
pfam18971 |
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial ... |
863-1031 |
1.03e-03 |
|
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial virulence determinant and critical for gastric carcinogenesis. X-ray crystallographic analysis of the N-terminal CagA fragment (residues 1-876) revealed that the region has a structure comprised of three discrete domains. Domain I constitutes a mobile CagA N terminus, while Domain II tethers CagA to the plasma membrane by interacting with membrane phosphatidylserine. Domain III interacts intramolecularly with the intrinsically disordered C-terminal region, and this interaction potentiates the pathogenic scaffold/hub function of CagA.
Pssm-ID: 408741 [Multi-domain] Cd Length: 876 Bit Score: 44.38 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 863 QASLERQKVAHEEEVNRLQEKWEK---ERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALY 939
Cdd:pfam18971 598 KAVAEAKSTGNYDEVKKAQKDLEKslrKREHLEKEVEKKLESKSGNKNKMEAKAQANSQKDEIFALINKEANRDARAIAY 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 940 QMQLETEKERVSllETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQ-------------AQLQETQQELKEAA 1006
Cdd:pfam18971 678 TQNLKGIKRELS--DKLEKISKDLKDFSKSFDEFKNGKNKDFSKAEETLKALKgsvkdlginpewiSKVENLNAALNEFK 755
|
170 180
....*....|....*....|....*
gi 194018503 1007 QQHRDDLAAFQKDKLDLQKQVEDLM 1031
Cdd:pfam18971 756 NGKNKDFSKVTQAKSDLENSVKDVI 780
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1079-1780 |
1.06e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.57 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1079 KEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRE-LGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASL 1157
Cdd:TIGR00618 163 KEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAElLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSH 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1158 W--AQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPELRGGGDSAPTLWGPDPDQNG 1235
Cdd:TIGR00618 243 AylTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRS 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1236 ASRLFKRWS--LPTALSPEAVALALQKLHQDVWKARQARD------DLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQL 1307
Cdd:TIGR00618 323 RAKLLMKRAahVKQQSSIEEQRRLLQTLHSQEIHIRDAHEvatsirEISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKEL 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1308 SQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDrelLQASKEKLSAQVEHLQACVAEAQAQADAA 1387
Cdd:TIGR00618 403 DILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCT---AQCEKLEKIHLQESAQSLKEREQQLQTKE 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1388 AVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQG--KALQENLALLAQTLSNREREVETLQAEVQELEKQRE 1465
Cdd:TIGR00618 480 QIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDnpGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1466 MQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEH-LPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQ---- 1540
Cdd:TIGR00618 560 SLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDlTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQqcsq 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1541 -----LLDLEQKAQVIESQRGQIQDL---KKQLGTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEE 1612
Cdd:TIGR00618 640 elalkLTALHALQLTLTQERVREHALsirVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDRE 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1613 RSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTK 1692
Cdd:TIGR00618 720 FNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTH 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1693 ILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQElQGHMGQLEQQL 1772
Cdd:TIGR00618 800 LLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQE-QAKIIQLSDKL 878
|
....*...
gi 194018503 1773 QGLHRKVG 1780
Cdd:TIGR00618 879 NGINQIKI 886
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1048-1465 |
1.34e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.18 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1048 IEEKVKVAQECSRIQKELEKENASLalslVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRelgvqvelLRQEVKE 1127
Cdd:PRK04863 285 LEEALELRRELYTSRRQLAAEQYRL----VEMARELAELNEAESDLEQDYQAASDHLNLVQTALR--------QQEKIER 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1128 KEADFVAREAQLLEELEASRVAEQQLRASlwaqEAKATQLQLQLRSTESQL----EALVAEQQPENQAQAQLASLcsvlq 1203
Cdd:PRK04863 353 YQADLEELEERLEEQNEVVEEADEQQEEN----EARAEAAEEEVDELKSQLadyqQALDVQQTRAIQYQQAVQAL----- 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1204 qalgsacesrpelrgggDSAPTLWG-PDPDQNGAsrlfKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLrDQVQKL 1282
Cdd:PRK04863 424 -----------------ERAKQLCGlPDLTADNA----EDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQF-EQAYQL 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1283 VQRLTDtEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLeSELRDLHETAASLQSRLRQAELQKMEAQNDRELLQAS 1362
Cdd:PRK04863 482 VRKIAG-EVSRSEAWDVARELLRRLREQRHLAEQLQQLRMRL-SELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQL 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1363 KEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQT 1442
Cdd:PRK04863 560 QEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLER 639
|
410 420
....*....|....*....|...
gi 194018503 1443 LSNREREVETLQAEVQELEKQRE 1465
Cdd:PRK04863 640 ERELTVERDELAARKQALDEEIE 662
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1777-2118 |
1.44e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1777 RKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSAL 1856
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1857 QAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEART 1936
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1937 LQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQA 2016
Cdd:COG4372 166 LAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2017 TLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETR 2096
Cdd:COG4372 246 EDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELA 325
|
330 340
....*....|....*....|..
gi 194018503 2097 RLLESLKELQLTVAQREEEILM 2118
Cdd:COG4372 326 KKLELALAILLAELADLLQLLL 347
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
653-961 |
1.62e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 653 SRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHL 732
Cdd:COG4372 52 EELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQR 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 733 EQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTehvlglrsaKEQLESNLFEAQQQNSVIQVTKGQL 812
Cdd:COG4372 132 KQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALS---------EAEAEQALDELLKEANRNAEKEEEL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 813 EVQIQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQ 892
Cdd:COG4372 203 AEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAA 282
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 194018503 893 QELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQK 961
Cdd:COG4372 283 LELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLL 351
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
456-1127 |
1.68e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.74 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 456 QGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQlqGDSAQGEKLEQQEE 535
Cdd:PRK01156 137 QGEMDSLISGDPAQRKKILDEILEINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELE--NIKKQIADDEKSHS 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 536 LHLavRERERLQETLVGLEAKQ---SESLSELLTLREalESSRLEGELLKQErvevaAALARAEQSIVELSGSENSLKAE 612
Cdd:PRK01156 215 ITL--KEIERLSIEYNNAMDDYnnlKSALNELSSLED--MKNRYESEIKTAE-----SDLSMELEKNNYYKELEERHMKI 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 613 VADlrAAAVKLGALNEALALDKveLNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREalweKKTQLETQLQK 692
Cdd:PRK01156 286 IND--PVYKNRNYINDYFKYKN--DIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKS----RYDDLNNQILE 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 693 AEEAGAELQAELRgtreEKEELKDKLSEAHHQQETATAHLEqlhqdaerqeETLARAVQEKEALVRERAALEVRLQAVER 772
Cdd:PRK01156 358 LEGYEMDYNSYLK----SIESLKKKIEEYSKNIERMSAFIS----------EILKIQEIDPDAIKKELNEINVKLQDISS 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 773 DRQDLTEHVLGLRSAKEQLESNLfeaqqqnsviqvtkgqlevqiqtiiqakEVIQGEVKCLKLELDAertraeqewdava 852
Cdd:PRK01156 424 KVSSLNQRIRALRENLDELSRNM----------------------------EMLNGQSVCPVCGTTL------------- 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 853 rqlaqaeqegqaslerqkvaHEEEVNRLQEKWEKERSWLQQELDKTletlERERAELETKLReQQTEMEAIRAQREEERS 932
Cdd:PRK01156 463 --------------------GEEKSNHIINHYNEKKSRLEEKIREI----EIEVKDIDEKIV-DLKKRKEYLESEEINKS 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 933 QAdsalYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGM-------------LQAQLQETQ 999
Cdd:PRK01156 518 IN----EYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLnalavislidietNRSRSNEIK 593
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1000 QELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVK------EEIEEKVKVAQECSRIQKELEKENASLA 1073
Cdd:PRK01156 594 KQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQenkiliEKLRGKIDNYKKQIAEIDSIIPDLKEIT 673
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 194018503 1074 LSLVEKEKRllilqeadsvrqqeLSSLRQDIQEAQEGQRELGVQVELLRQEVKE 1127
Cdd:PRK01156 674 SRINDIEDN--------------LKKSRKALDDAKANRARLESTIEILRTRINE 713
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1826-2031 |
1.82e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1826 AQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDL 1905
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGER 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1906 RAESREHEKAVLALQ------------------QRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRR 1967
Cdd:COG3883 92 ARALYRSGGSVSYLDvllgsesfsdfldrlsalSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 194018503 1968 QEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEA 2031
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
874-1007 |
1.96e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 43.66 E-value: 1.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 874 EEEVNRLQEKWEKerswLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQmqletekervsll 953
Cdd:PRK00409 515 KEKLNELIASLEE----LERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEAQQ------------- 577
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 194018503 954 etLLRTQKELADASQQLERLRQDMKIQKLKEQEttgmlqaqLQETQQELKEAAQ 1007
Cdd:PRK00409 578 --AIKEAKKEADEIIKELRQLQKGGYASVKAHE--------LIEARKRLNKANE 621
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1755-1976 |
2.12e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1755 QERIQELQGHMGQLEQQLQGLHRKVGETSLllthrEQETATLQQHLQEakeqgelreqvLQGQLEEAQRDLAQRDHELET 1834
Cdd:COG3206 181 EEQLPELRKELEEAEAALEEFRQKNGLVDL-----SEEAKLLLQQLSE-----------LESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1835 LRQekqqtqdqeesmKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEK 1914
Cdd:COG3206 245 LRA------------QLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQ 312
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1915 AVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAE--------NQYSRRQEEAAVSQA 1976
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREvevarelyESLLQRLEEARLAEA 382
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1581-1779 |
2.20e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1581 KVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQE 1660
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1661 QLAQALERKGQ----ELVLQKERIQVLEDQRTLQTKILEEDLEQIKhSLRERSQELASQWQLVHERADDGKSPSKGQRGS 1736
Cdd:COG4942 108 ELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLKYLAPARREQAE-ELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 194018503 1737 LEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKV 1779
Cdd:COG4942 187 RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALI 229
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
623-844 |
2.36e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 623 LGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQA 702
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 703 ELRGTREEKEELKDKLSE---AHHQQETATAHLEQLHQ----DAERQEETLARAVQEK----EALVRERAALEVRLQAVE 771
Cdd:COG4942 91 EIAELRAELEAQKEELAEllrALYRLGRQPPLALLLSPedflDAVRRLQYLKYLAPARreqaEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 194018503 772 RDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTRA 844
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
1786-2220 |
2.44e-03 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 42.97 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1786 LTHREQETATLQQHLQEAKE--QGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEEsmkLKTSALQAALEQA 1863
Cdd:COG5278 78 LEPYEEARAEIDELLAELRSltADNPEQQARLDELEALIDQWLAELEQVIALRRAGGLEAALAL---VRSGEGKALMDEI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1864 HATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQ 1943
Cdd:COG5278 155 RARLLLLALALAALLLAAAALLLLLLALAALLALAELLLLALARALAALLLLLLLEAELAAAAALLAAAAALAALAALEL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1944 AQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQA 2023
Cdd:COG5278 235 LAALALALALLLAALLLALLAALALAALLAAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAAAAAA 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2024 SARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLK 2103
Cdd:COG5278 315 AAAAAAAAAALAALLALALATALAAAAAALALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVELEVLA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2104 ELQLTVAQREEEILMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISS 2183
Cdd:COG5278 395 IAAAAAAAAAEAAAAAAAAAAASAAEALELAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAAVAAL 474
|
410 420 430
....*....|....*....|....*....|....*..
gi 194018503 2184 LQEITMFLQASVLERESEQQRLQEELVLSRQALEEQQ 2220
Cdd:COG5278 475 AALAAAAAALAEAEAAAALAAAAALSLALALAALLLA 511
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1744-2002 |
2.82e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.06 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1744 LRDKEKEVECQQERIQELQGHMGQLEQQLQGlhrKVGETSLLLTHREQETATLQQHLQEAKEQGELR-EQVLQGQLEEAQ 1822
Cdd:TIGR00927 627 LGDLSKGDVAEAEHTGERTGEEGERPTEAEG---ENGEESGGEAEQEGETETKGENESEGEIPAERKgEQEGEGEIEAKE 703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1823 RDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATlkERQGELEEHREQVRRLQEELEVEGRQVRALEEVl 1902
Cdd:TIGR00927 704 ADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEG--EAEGKHEVETEGDRKETEHEGETEAEGKEDEDE- 780
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1903 GDLRA-ESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQE 1981
Cdd:TIGR00927 781 GEIQAgEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDG 860
|
250 260
....*....|....*....|.
gi 194018503 1982 ALSKAQAALQEKEQSLLEQAE 2002
Cdd:TIGR00927 861 GDSEEEEEEEEEEEEEEEEEE 881
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
819-948 |
2.91e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.89 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 819 IIQAKEVIQGEVkcLKLE-----LDAERTRAEQEWDAVARQLAQAEQEgQASLERQKvaheeevNRLQEKWEKERSWLQQ 893
Cdd:PRK00409 504 IEEAKKLIGEDK--EKLNeliasLEELERELEQKAEEAEALLKEAEKL-KEELEEKK-------EKLQEEEDKLLEEAEK 573
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 894 ELDKTLETLERERAELETKLREQQTemEAIRAQREEERSQADSALYQMQLETEKE 948
Cdd:PRK00409 574 EAQQAIKEAKKEADEIIKELRQLQK--GGYASVKAHELIEARKRLNKANEKKEKK 626
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1612-1852 |
3.16e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.69 E-value: 3.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1612 ERSQELQAQSSQLHELEnhsthlakelqerdQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQT 1691
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQ--------------QQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDEL 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1692 KILEEDLEQIKHSLRERSQELA------SQWQLVHERADDGKS-PSKGQrgslehlklilrdkekEVECQQERIQELQGH 1764
Cdd:PHA02562 244 LNLVMDIEDPSAALNKLNTAAAkikskiEQFQKVIKMYEKGGVcPTCTQ----------------QISEGPDRITKIKDK 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1765 MGQLEQQLQGLHRKVGEtsllLTHREQETATLQQHLQEAKEQGELREQVLQG----------QLEEAQRDLAQRDHELET 1834
Cdd:PHA02562 308 LKELQHSLEKLDTAIDE----LEEIMDEFNEQSKKLLELKNKISTNKQSLITlvdkakkvkaAIEELQAEFVDNAEELAK 383
|
250
....*....|....*...
gi 194018503 1835 LRQEKQQTQDQEESMKLK 1852
Cdd:PHA02562 384 LQDELDKIVKTKSELVKE 401
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
24-602 |
3.29e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.00 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 24 LALQQQMAENQAASW-RKLKNSQEAQKRQATLVRKLQAKVLQYRSWCQDLEKRLEATGGLIPQRWESVEEPN--LEQLLI 100
Cdd:COG1196 216 RELKEELKELEAELLlLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQaeEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 101 RLEEEQQRCESLVEVNTELRLHMEKADVVNKALQEDVEKLTVDWSRARDELVRKESQWRMEQEffkgylrgehgrllnLW 180
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEA---------------EL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 181 REVVTFRRHFLKMKSATDRDLTELKAEHARLSgSLLTCCLRLTLRAQSRESSGSGRTEESEPARLLLLVAKTQALEKEAH 260
Cdd:COG1196 361 AEAEEALLEAEAELAEAEEELEELAEELLEAL-RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 261 EKSQELMQLKSHGDLEKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEASLSRNAQEEKLSL 340
Cdd:COG1196 440 EEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGL 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 341 QQVIKAITQALASVEEEDTVTqssghEDSLQSDCNGLSQFDPQDPDRALTLVQSVLTRRQQAVQDLRQQLSGCQEAMSFL 420
Cdd:COG1196 520 RGLAGAVAVLIGVEAAYEAAL-----EAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 421 QQQHDQWEEEGRALREKLQKLTGERDALAGQTVG---LQGEVDSLTGERDALAGQTVDLQGEVDSLSRERELLQKARGEL 497
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVaarLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 498 QQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLE 577
Cdd:COG1196 675 LEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALE 754
|
570 580
....*....|....*....|....*
gi 194018503 578 GELLKQERVEVAAALARAEQSIVEL 602
Cdd:COG1196 755 ELPEPPDLEELERELERLEREIEAL 779
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1894-2133 |
3.51e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1894 QVRALEEVLGDLRAESREHEKAVLALQQRCAE---QAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEE 1970
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKAllkQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1971 AavsQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVT 2050
Cdd:COG4942 101 A---QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2051 QHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRAL 2130
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKLPW 257
|
...
gi 194018503 2131 PAE 2133
Cdd:COG4942 258 PVS 260
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
558-1150 |
3.69e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.74 E-value: 3.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 558 SESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALAldkvel 637
Cdd:PRK03918 168 GEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIE------ 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 638 nqqllQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLEtQLQKAEEAGAELQAELRGTREEKEELKDK 717
Cdd:PRK03918 242 -----ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELREIEKR 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 718 LSEAHHQQETATAHLEQLHQDAERQEETLaravQEKEALVRERAALEVRLQAVERDRQDLTEhvlgLRSAKEQLESNlfe 797
Cdd:PRK03918 316 LSRLEEEINGIEERIKELEEKEERLEELK----KKLKELEKRLEELEERHELYEEAKAKKEE----LERLKKRLTGL--- 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 798 aqqqnsviqvTKGQLEVQIQTIIQAKEVIQGEVKCLKLELdaertraeqewdavaRQLAQAEQEGQASLERQKVAHEEEV 877
Cdd:PRK03918 385 ----------TPEKLEKELEELEKAKEEIEEEISKITARI---------------GELKKEIKELKKAIEELKKAKGKCP 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 878 NRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSqadsalyqmqletekervslletlL 957
Cdd:PRK03918 440 VCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESE------------------------L 495
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 958 RTQKELADasqQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDL---AAFQKDKLDLQKQVEDLMSQL 1034
Cdd:PRK03918 496 IKLKELAE---QLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELeklEELKKKLAELEKKLDELEEEL 572
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1035 vahddsQRLVKEEIEEKVKVAQECSRIQKELEKENASLaLSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQREL 1114
Cdd:PRK03918 573 ------AELLKELEELGFESVEELEERLKELEPFYNEY-LELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEEL 645
|
570 580 590
....*....|....*....|....*....|....*.
gi 194018503 1115 GVQVELLRQEVKEKEADFVAREAQLLEELEASRVAE 1150
Cdd:PRK03918 646 RKELEELEKKYSEEEYEELREEYLELSRELAGLRAE 681
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1299-2220 |
3.71e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.85 E-value: 3.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1299 ELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVA 1378
Cdd:pfam01576 6 EMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1379 EAQAQADAaavLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQ 1458
Cdd:pfam01576 86 EEEERSQQ---LQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERIS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1459 ELEKQ-REMQKAALELLSLDLKKRSREVDlqqeqiqeleqcrsvlehlpmaVQEREQKLSVQRDQIRELENDREAQRSVL 1537
Cdd:pfam01576 163 EFTSNlAEEEEKAKSLSKLKNKHEAMISD----------------------LEERLKKEEKGRQELEKAKRKLEGESTDL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1538 EHQLLDLEQKAQVIESQRGQIQD-LKKQLGTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEERSQE 1616
Cdd:pfam01576 221 QEQIAELQAQIAELRAQLAKKEEeLQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEE 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1617 LQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQE-QLAQALERKGQELVLQKERIQvledqrtlQTKILE 1695
Cdd:pfam01576 301 LEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEaQLQEMRQKHTQALEELTEQLE--------QAKRNK 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1696 EDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGL 1775
Cdd:pfam01576 373 ANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEA 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1776 HRKVGETSLLLTHREQETATLQQHLQEAKEQG----------ELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQ 1845
Cdd:pfam01576 453 EGKNIKLSKDVSSLESQLQDTQELLQEETRQKlnlstrlrqlEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKK 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1846 EESMKLKTSA-------LQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVL- 1917
Cdd:pfam01576 533 LEEDAGTLEAleegkkrLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAe 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1918 --ALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEA---LSKAQAALQE 1992
Cdd:pfam01576 613 ekAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNvheLERSKRALEQ 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1993 KEQSLLEQ-AELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELcqkKEELRQLLEKA 2071
Cdd:pfam01576 693 QVEEMKTQlEELEDELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAEL---EDERKQRAQAV 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2072 GARRSQENGIQEkqsLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPALQPLPA-QQELERLQ 2150
Cdd:pfam01576 770 AAKKKLELDLKE---LEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNlEAELLQLQ 846
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 194018503 2151 TALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASV--LERESEQQRLQEELVLSRQALEEQQ 2220
Cdd:pfam01576 847 EDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIaqLEEELEEEQSNTELLNDRLRKSTLQ 918
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1232-1566 |
3.87e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.20 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1232 DQNGASRLFKRWSLPTALSPEAVALALQKlhQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQ 1311
Cdd:COG4372 2 DRLGEKVGKARLSLFGLRPKTGILIAALS--EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1312 EEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAqaqadaaavlE 1391
Cdd:COG4372 80 EELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAER----------E 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1392 EDLRTARSALKLKNEELES-ERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAA 1470
Cdd:COG4372 150 EELKELEEQLESLQEELAAlEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1471 LELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQV 1550
Cdd:COG4372 230 KLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSL 309
|
330
....*....|....*.
gi 194018503 1551 IESQRGQIQDLKKQLG 1566
Cdd:COG4372 310 IGALEDALLAALLELA 325
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
1780-1917 |
4.31e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 42.39 E-value: 4.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1780 GETSLLLTHREQETATLQQHLQEAkeQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQA- 1858
Cdd:PRK12705 19 GVLVVLLKKRQRLAKEAERILQEA--QKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQREEERLVQKEEQLDAr 96
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 194018503 1859 ---------ALEQAHATLKERQGELEEHREQVRrlQEELEVEG-RQVRALEEVLGDLRAESrEHEKAVL 1917
Cdd:PRK12705 97 aekldnlenQLEEREKALSARELELEELEKQLD--NELYRVAGlTPEQARKLLLKLLDAEL-EEEKAQR 162
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
970-1449 |
4.31e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 4.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 970 LERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHrDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIE 1049
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKE-EEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1050 ekvkvaqecsriQKELEKENASLALSLVEKEKRLLILQEadsvRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKE 1129
Cdd:COG4717 127 ------------LLPLYQELEALEAELAELPERLEELEE----RLEELRELEEELEELEAELAELQEELEELLEQLSLAT 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1130 ADfvaREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSA 1209
Cdd:COG4717 191 EE---ELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGS 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1210 CESRPELRGGgdsAPTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQK-LVQRLTD 1288
Cdd:COG4717 268 LLSLILTIAG---VLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPeELLELLD 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1289 TEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLR-QAELQKMEAQNDRELLQASKEKLS 1367
Cdd:COG4717 345 RIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQElKEELEELEEQLEELLGELEELLEA 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1368 AQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLAL-LAQTLSNR 1446
Cdd:COG4717 425 LDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALkLALELLEE 504
|
...
gi 194018503 1447 ERE 1449
Cdd:COG4717 505 ARE 507
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1508-1730 |
4.43e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 4.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1508 AVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQK 1587
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1588 MITELEGQ--REMQRVALTHLTLDLEERSQELQAQSSQ--LHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLA 1663
Cdd:COG4942 101 AQKEELAEllRALYRLGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194018503 1664 QALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPS 1730
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
761-972 |
4.67e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 4.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 761 AALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAE 840
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 841 RTRAEQEWDAVARQLAQAEQEGQAS-----LERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLRE 915
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 916 QQTEMEAIRAQR---EEERSQADSALYQMQLETEKERVSlLETLLRTQKELADASQQLER 972
Cdd:COG4942 176 LEALLAELEEERaalEALKAERQKLLARLEKELAELAAE-LAELQQEAEELEALIARLEA 234
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
885-1171 |
4.73e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 42.15 E-value: 4.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 885 EKERSWLQQELDKTlETLERErAELEtKLREQqtemeaIRAQREEERSQADSALYQMQLETEKE----------RVSLLE 954
Cdd:PLN03229 416 ERKVNMKKREAVKT-PVRELE-GEVE-KLKEQ------ILKAKESSSKPSELALNEMIEKLKKEidleyteaviAMGLQE 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 955 TLLRTQKELADASQQLERLRQDM--KIQKLKEQETTGMLQA----QLQETQQELKEAaqqHRDDLAAFQKD-----KLDL 1023
Cdd:PLN03229 487 RLENLREEFSKANSQDQLMHPVLmeKIEKLKDEFNKRLSRApnylSLKYKLDMLNEF---SRAKALSEKKSkaeklKAEI 563
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1024 QKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVA--------QECSRIQKELEKENAS------LALSLVEKEKRLLILQEA 1089
Cdd:PLN03229 564 NKKFKEVMDRPEIKEKMEALKAEVASSGASSGdeldddlkEKVEKMKKEIELELAGvlksmgLEVIGVTKKNKDTAEQTP 643
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1090 DSVRQQELSSLRQDIQEAQE---GQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASrvAEQQLRASLWAQEAKATQ 1166
Cdd:PLN03229 644 PPNLQEKIESLNEEINKKIErviRSSDLKSKIELLKLEVAKASKTPDVTEKEKIEALEQQ--IKQKIAEALNSSELKEKF 721
|
....*
gi 194018503 1167 LQLQL 1171
Cdd:PLN03229 722 EELEA 726
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
952-1196 |
4.85e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.81 E-value: 4.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 952 LLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQH---RDDLAAFQKDKLDLQKQVE 1028
Cdd:COG4372 4 LGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELeqlEEELEQARSELEQLEEELE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1029 DLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQ 1108
Cdd:COG4372 84 ELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQ 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1109 EGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPE 1188
Cdd:COG4372 164 EELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALE 243
|
....*...
gi 194018503 1189 NQAQAQLA 1196
Cdd:COG4372 244 LEEDKEEL 251
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
391-536 |
5.46e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.49 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 391 LVQSVLTR----RQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLTGER 466
Cdd:PRK09039 39 VAQFFLSReisgKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRA 118
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 467 DALAGQtvdlqgevdsLSRERELLQKARgelqQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEEL 536
Cdd:PRK09039 119 GELAQE----------LDSEKQVSARAL----AQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKI 174
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
1755-2114 |
5.64e-03 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 42.09 E-value: 5.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1755 QERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQV--LQGQ--------------- 1817
Cdd:PRK10246 432 HGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIkdLEAQraqlqagqpcplcgs 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1818 -------------LEEAQRDLAQRDHELETLRQEKQQTQDQEESMklkTSALQAALEQAHATLKERQGELEEHREQVRRL 1884
Cdd:PRK10246 512 tshpaveayqalePGVNQSRLDALEKEVKKLGEEGAALRGQLDAL---TKQLQRDESEAQSLRQEEQALTQQWQAVCASL 588
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1885 QEELEVegrqvralEEVLGDLRAESREHEKAVLALQQRCAEQAQ--EHEAEARTLQDSWLQAQATLTEQEQELAALRAEN 1962
Cdd:PRK10246 589 NITLQP--------QDDIQPWLDAQEEHERQLRLLSQRHELQGQiaAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE 660
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1963 Q-----YSRRQEEAAVSQAEALQealskaQAALQEKEQSLleqAELSHTLEASTAALQATLDTCQASARQLEEALRIREG 2037
Cdd:PRK10246 661 DeeaswLATRQQEAQSWQQRQNE------LTALQNRIQQL---TPLLETLPQSDDLPHSEETVALDNWRQVHEQCLSLHS 731
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2038 EIQAQALQHHEVTQHLQQELCQ------------KKEELRQLLEKAGARRSQengiQEKQSLEQERQEETRRLLESLKEL 2105
Cdd:PRK10246 732 QLQTLQQQDVLEAQRLQKAQAQfdtalqasvfddQQAFLAALLDEETLTQLE----QLKQNLENQRQQAQTLVTQTAQAL 807
|
....*....
gi 194018503 2106 QLTVAQREE 2114
Cdd:PRK10246 808 AQHQQHRPD 816
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
951-1148 |
5.93e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 5.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 951 SLLETLLR-TQKELADASQQLERLRQDMKIQK--LKEQE-TTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQ 1026
Cdd:PHA02562 170 KLNKDKIReLNQQIQTLDMKIDHIQQQIKTYNknIEEQRkKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMD 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1027 VEDLMSQLVAHDDSQRLVKEEIEEKVKVA------QECSRIQKELEKEN---ASLALSLVEKEKRLLILQEAdsvrQQEL 1097
Cdd:PHA02562 250 IEDPSAALNKLNTAAAKIKSKIEQFQKVIkmyekgGVCPTCTQQISEGPdriTKIKDKLKELQHSLEKLDTA----IDEL 325
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 194018503 1098 SSLRQDIQEAQEGQRELGVQVELLRQEVK--EKEADFVAREaqlLEELEASRV 1148
Cdd:PHA02562 326 EEIMDEFNEQSKKLLELKNKISTNKQSLItlVDKAKKVKAA---IEELQAEFV 375
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
1603-2057 |
6.09e-03 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 41.82 E-value: 6.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1603 LTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQV 1682
Cdd:COG5278 71 LTGDESFLEPYEEARAEIDELLAELRSLTADNPEQQARLDELEALIDQWLAELEQVIALRRAGGLEAALALVRSGEGKAL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1683 LEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQ 1762
Cdd:COG5278 151 MDEIRARLLLLALALAALLLAAAALLLLLLALAALLALAELLLLALARALAALLLLLLLEAELAAAAALLAAAAALAALA 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1763 GHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQT 1842
Cdd:COG5278 231 ALELLAALALALALLLAALLLALLAALALAALLAAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1843 QDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQR 1922
Cdd:COG5278 311 AAAAAAAAAAAAAALAALLALALATALAAAAAALALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVEL 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1923 CAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAE 2002
Cdd:COG5278 391 EVLAIAAAAAAAAAEAAAAAAAAAAASAAEALELAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAA 470
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 2003 LSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQEL 2057
Cdd:COG5278 471 VAALAALAAAAAALAEAEAAAALAAAAALSLALALAALLLAAAEAALAAALAAAL 525
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1814-1961 |
6.35e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 6.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1814 LQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHR--EQVRRLQEELEVE 1891
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRnnKEYEALQKEIESL 101
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1892 GRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAE 1961
Cdd:COG1579 102 KRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAK 171
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1270-1412 |
6.60e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.10 E-value: 6.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1270 QARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQK 1349
Cdd:PRK09039 53 SALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEKQVS 132
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 194018503 1350 MEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDL-RTARSALKLKNEELESER 1412
Cdd:PRK09039 133 ARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLgRRLNVALAQRVQELNRYR 196
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1695-1990 |
6.78e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1695 EEDLEQIKHSLRERSQELA---SQWQLVHERADDGKSPSKGQRGSLEHLKLILRDK--EKEVECQQER---------IQE 1760
Cdd:PRK04863 836 EAELRQLNRRRVELERALAdheSQEQQQRSQLEQAKEGLSALNRLLPRLNLLADETlaDRVEEIREQLdeaeeakrfVQQ 915
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1761 LQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQ 1840
Cdd:PRK04863 916 HGNALAQLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLNEKLRQRLE 995
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1841 QTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGrqVRALEEVLGDLRAESREHEKAVLALQ 1920
Cdd:PRK04863 996 QAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLG--VPADSGAEERARARRDELHARLSANR 1073
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1921 QRCAE---QAQEHEAEARTLQDSWLQAQATLTEQEQELAALRA----------ENQYSRR--QEEAAVSQAEALQEALSK 1985
Cdd:PRK04863 1074 SRRNQlekQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAgwcavlrlvkDNGVERRlhRRELAYLSADELRSMSDK 1153
|
....*
gi 194018503 1986 AQAAL 1990
Cdd:PRK04863 1154 ALGAL 1158
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1898-2220 |
6.79e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 6.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1898 LEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAE 1977
Cdd:COG4372 4 LGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1978 ALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQAlqhhEVTQHLQQEL 2057
Cdd:COG4372 84 ELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAERE----EELKELEEQL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2058 CQKKEELRQLlekagarrsqenGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPAL 2137
Cdd:COG4372 160 ESLQEELAAL------------EQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2138 QPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERESEQQRLQEELVLSRQALE 2217
Cdd:COG4372 228 EAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAAL 307
|
...
gi 194018503 2218 EQQ 2220
Cdd:COG4372 308 SLI 310
|
|
| COG5283 |
COG5283 |
Phage-related tail protein [Mobilome: prophages, transposons]; |
663-764 |
6.89e-03 |
|
Phage-related tail protein [Mobilome: prophages, transposons];
Pssm-ID: 444094 [Multi-domain] Cd Length: 747 Bit Score: 41.76 E-value: 6.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 663 SALQVDLAEAERRREALWEKKTQLET-------QLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQL 735
Cdd:COG5283 10 KPFKSALESAKQRVAALAQALKALEAptralarALERAKQAAARLQTKYNKLRQSLQRLRQALDQAGIDTRQLSAAQRRL 89
|
90 100 110
....*....|....*....|....*....|....*.
gi 194018503 736 HQDAE-------RQEETLARAVQEKEALVRERAALE 764
Cdd:COG5283 90 RSSLEqtnrqleRQQQRLARLGARQDRLKAARARLQ 125
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1755-2094 |
7.47e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 7.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1755 QERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQgelrEQVLQGQLEEAQRDLAQRDHELET 1834
Cdd:COG4372 30 SEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEE----LEELNEQLQAAQAELAQAQEELES 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1835 LRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEK 1914
Cdd:COG4372 106 LQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQAL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1915 AVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKE 1994
Cdd:COG4372 186 DELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELEL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1995 QSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGAR 2074
Cdd:COG4372 266 AILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQL 345
|
330 340
....*....|....*....|
gi 194018503 2075 RSQENGIQEKQSLEQERQEE 2094
Cdd:COG4372 346 LLVGLLDNDVLELLSKGAEA 365
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
659-968 |
8.09e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 8.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 659 EQLRSALQVDLAEAERRRealweKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQD 738
Cdd:pfam17380 299 ERLRQEKEEKAREVERRR-----KLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIAME 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 739 AE--RQEETLARAVQEKEALVRER--AALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEaqqqnsvIQVTKGQLEV 814
Cdd:pfam17380 374 ISrmRELERLQMERQQKNERVRQEleAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQRE-------VRRLEEERAR 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 815 QIQTIIQAKEVIQGEVKCLKLElDAERTRAEQEWDAVARQLAQAEQEGQASLERQKvaheEEVNRLQEKWEKERSWLQQE 894
Cdd:pfam17380 447 EMERVRLEEQERQQQVERLRQQ-EEERKRKKLELEKEKRDRKRAEEQRRKILEKEL----EERKQAMIEEERKRKLLEKE 521
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 895 L-DKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQ 968
Cdd:pfam17380 522 MeERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARAEYEATTP 596
|
|
| PTZ00491 |
PTZ00491 |
major vault protein; Provisional |
1801-1933 |
8.30e-03 |
|
major vault protein; Provisional
Pssm-ID: 240439 [Multi-domain] Cd Length: 850 Bit Score: 41.54 E-value: 8.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1801 QEAKEQGELREQVLQGQLEeaqRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELE--EHR 1878
Cdd:PTZ00491 666 AAARHQAELLEQEARGRLE---RQKMHDKAKAEEQRTKLLELQAESAAVESSGQSRAEALAEAEARLIEAEAEVEqaELR 742
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 194018503 1879 EQVRRLQEELEVEGRQVRALEEVlgdlraesrEHEKAVLALQQRCAEQAQEHEAE 1933
Cdd:PTZ00491 743 AKALRIEAEAELEKLRKRQELEL---------EYEQAQNELEIAKAKELADIEAT 788
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1652-2102 |
8.79e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 8.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1652 IDELQKQQEQLaqaLERKGQELVLQKERIQVLEDQRTlQTKILEEDLEQIKHSLRERSQELasqwqlvhERADDGKSPSK 1731
Cdd:COG4717 48 LERLEKEADEL---FKPQGRKPELNLKELKELEEELK-EAEEKEEEYAELQEELEELEEEL--------EELEAELEELR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1732 GQRGSLEHLKLILRDKEKEVECQQErIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELRE 1811
Cdd:COG4717 116 EELEKLEKLLQLLPLYQELEALEAE-LAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1812 QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHAT------------------------- 1866
Cdd:COG4717 195 QDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARlllliaaallallglggsllslilt 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1867 ---------------LKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRcAEQAQEHE 1931
Cdd:COG4717 275 iagvlflvlgllallFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDR-IEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1932 AEARTLQDSwLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELS--HTLEA 2009
Cdd:COG4717 354 REAEELEEE-LQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdeEELEE 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 2010 STAALQATLDTCQASARQLEEALRIREGEIqaQALQHHEVTQHLQQELCQKKEELRQLLEKAGARR-SQENGIQEKQSLE 2088
Cdd:COG4717 433 ELEELEEELEELEEELEELREELAELEAEL--EQLEEDGELAELLQELEELKAELRELAEEWAALKlALELLEEAREEYR 510
|
490
....*....|....
gi 194018503 2089 QERQEETRRLLESL 2102
Cdd:COG4717 511 EERLPPVLERASEY 524
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
973-1186 |
9.11e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 9.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 973 LRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQhrddLAAFQKDK--LDLQKQVEDLMSQLVAHDDSQRLVKEEIEE 1050
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAA----LEEFRQKNglVDLSEEAKLLLQQLSELESQLAEARAELAE 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1051 KVKVAQECSRIQKELEKENASLALSLVEKEKRllilqeadsvrqQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEA 1130
Cdd:COG3206 238 AEARLAALRAQLGSGPDALPELLQSPVIQQLR------------AQLAELEAELAELSARYTPNHPDVIALRAQIAALRA 305
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 194018503 1131 DFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQ 1186
Cdd:COG3206 306 QLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVE 361
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
1176-1474 |
9.71e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 41.17 E-value: 9.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1176 SQLEALVAEQQPENQAQAQLASLCSVLQQALGSaCESRPeLRGGGDSAPTLWGPDPDQNGASRLFKRWSLPTA----LSP 1251
Cdd:pfam05667 124 AVLQRAIAAAIRSQLAAPWLPPECKPHQRRQGS-RALRP-FHTQTLVLPGRKGKTLKNSKELKEFYSEYLPPVtaqpSSR 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1252 EAVALALQKLHQDVWKARQARDDLRDQvQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDL 1331
Cdd:pfam05667 202 ASVVPSLLERNAAELAAAQEWEEEWNS-QGLASRLTPEEYRKRKRTKLLKRIAEQLRSAALAGTEATSGASRSAQDLAEL 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 1332 HETAAslQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQAcvaeaqaqadaaAVLEEDLRTARSalklknEELESE 1411
Cdd:pfam05667 281 LSSFS--GSSTTDTGLTKGSRFTHTEKLQFTNEAPAATSSPPTK------------VETEEELQQQRE------EELEEL 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 194018503 1412 RERAQALQEQGElkvaqgkALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELL 1474
Cdd:pfam05667 341 QEQLEDLESSIQ-------ELEKEIKKLESSIKQVEEELEELKEQNEELEKQYKVKKKTLDLL 396
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
512-1067 |
9.77e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.43 E-value: 9.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 512 RRMNMELQLQGDSAQGEK-LEQQEELHLAVRERERLQETLVGLEAkqseSLSELLTLREALESSRLEGELLKQERVEVAA 590
Cdd:PRK01156 136 GQGEMDSLISGDPAQRKKiLDEILEINSLERNYDKLKDVIDMLRA----EISNIDYLEEKLKSSNLELENIKKQIADDEK 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 591 ALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLA 670
Cdd:PRK01156 212 SHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVY 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 671 EAERRREALWEKKTQLET----------QLQKAEEA---GAELQA---ELRGTREEKEELK---DKLSEAHHQQETATAH 731
Cdd:PRK01156 292 KNRNYINDYFKYKNDIENkkqilsnidaEINKYHAIikkLSVLQKdynDYIKKKSRYDDLNnqiLELEGYEMDYNSYLKS 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 732 LEQLHQDAERQE-----------ETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESN--LFEA 798
Cdd:PRK01156 372 IESLKKKIEEYSkniermsafisEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNmeMLNG 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 799 QQQNSVIQVTKGQ----------------LEVQIQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLaqaeqeg 862
Cdd:PRK01156 452 QSVCPVCGTTLGEeksnhiinhynekksrLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKI------- 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 863 qASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAE-LETKLREQQTEMEAIRAQREEERSQADSALYQM 941
Cdd:PRK01156 525 -ESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSwLNALAVISLIDIETNRSRSNEIKKQLNDLESRL 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194018503 942 Q-LETEKERV-SLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQL------QETQQELKEAAQQHRDDL 1013
Cdd:PRK01156 604 QeIEIGFPDDkSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIaeidsiIPDLKEITSRINDIEDNL 683
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 194018503 1014 AAfqkdkldLQKQVEDLMSQLVAHDDSQRLVKEEIEEkvkVAQECSRIQKELEK 1067
Cdd:PRK01156 684 KK-------SRKALDDAKANRARLESTIEILRTRINE---LSDRINDINETLES 727
|
|
| |
