|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465143 Cd Length: 412 Bit Score: 761.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 194363725 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 super family |
cl34960 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-739 |
9.08e-85 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
The actual alignment was detected with superfamily member COG5259:
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 285.63 E-value: 9.08e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 539 SGLVPLQPKTPQGRQVD-ADTKAGRKGKE------LDDLVpETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNFGLRTD 611
Cdd:COG5259 167 RGLSPFLPWGPINQRVLgAKEIEYETHKEenyspsLKSPK-KESQGKVDELKDHSEKHPSSCSCCGNKSFNTRYHNLRAE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 612 MYT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI 675
Cdd:COG5259 246 KYNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPI 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194363725 676 EDPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 739
Cdd:COG5259 326 EDNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
715-781 |
6.49e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 124.39 E-value: 6.49e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194363725 715 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 781
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
911-977 |
4.09e-31 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 117.23 E-value: 4.09e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194363725 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 977
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 super family |
cl31754 |
MAEBL; Provisional |
721-978 |
3.19e-07 |
|
MAEBL; Provisional
The actual alignment was detected with superfamily member PTZ00121:
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 3.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 721 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 795
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 796 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 873
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 874 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 953
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 194363725 954 QRQQLLADRQAFHMEQLKYAEMRAR 978
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| PRK07003 super family |
cl35530 |
DNA polymerase III subunit gamma/tau; |
1006-1141 |
2.88e-04 |
|
DNA polymerase III subunit gamma/tau;
The actual alignment was detected with superfamily member PRK07003:
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 1006 TGAAGPPAVHGLAVAPASVVPA-PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1084
Cdd:PRK07003 397 PAVTAVTGAAGAALAPKAAAAAaATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGS 476
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 194363725 1085 QQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD-PGTPLPPDPTAPS 1141
Cdd:PRK07003 477 ASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDaPAAAAPPAPEARP 534
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465143 Cd Length: 412 Bit Score: 761.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 194363725 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 |
COG5259 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-739 |
9.08e-85 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 285.63 E-value: 9.08e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 539 SGLVPLQPKTPQGRQVD-ADTKAGRKGKE------LDDLVpETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNFGLRTD 611
Cdd:COG5259 167 RGLSPFLPWGPINQRVLgAKEIEYETHKEenyspsLKSPK-KESQGKVDELKDHSEKHPSSCSCCGNKSFNTRYHNLRAE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 612 MYT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI 675
Cdd:COG5259 246 KYNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPI 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194363725 676 EDPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 739
Cdd:COG5259 326 EDNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM |
pfam04433 |
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid ... |
433-512 |
7.39e-37 |
|
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Pssm-ID: 461307 [Multi-domain] Cd Length: 78 Bit Score: 133.07 E-value: 7.39e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 433 FDYNSVHAIERRALPEFFNGKnkSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Cdd:pfam04433 1 SDPDKLHPIEKRLLPEFFNGK--SKTPEVYLEIRNFILNLWRENPKEYLTKTDARRALKGDVNLISRIHEFLERWGLINF 78
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
715-781 |
6.49e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 124.39 E-value: 6.49e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194363725 715 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 781
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
911-977 |
4.09e-31 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 117.23 E-value: 4.09e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194363725 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 977
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
721-978 |
3.19e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 3.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 721 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 795
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 796 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 873
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 874 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 953
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 194363725 954 QRQQLLADRQAFHMEQLKYAEMRAR 978
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
748-978 |
9.23e-07 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 52.95 E-value: 9.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 748 RKVEEAAKVTGKADPAFGLESSGIAgttsDEPERIEESGNDEARVEGQATDEKKEPKEpREGGGAIEEEAKEKTSEAPKK 827
Cdd:pfam02029 77 KRLQEALERQKEFDPTIADEKESVA----ERKENNEEEENSSWEKEEKRDSRLGRYKE-EETEIREKEYQENKWSTEVRQ 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 828 DEEKG-KEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKH 906
Cdd:pfam02029 152 AEEEGeEEEDKSEEAEEVPTENFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHPEVKSQNGEEEVTKLKVTTKRRQGGLS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 907 LAAVEERKIKSLVallvETQMKKLEIKLRH---------------------FEELETIMDREREALEYQRQQllaDRQAF 965
Cdd:pfam02029 232 QSQEREEEAEVFL----EAEQKLEELRRRRqekeseefeklrqkqqeaeleLEELKKKREERRKLLEEEEQR---RKQEE 304
|
250
....*....|...
gi 194363725 966 HMEQLKYAEMRAR 978
Cdd:pfam02029 305 AERKLREEEEKRR 317
|
|
| CHROMO |
smart00298 |
Chromatin organization modifier domain; |
187-222 |
3.92e-05 |
|
Chromatin organization modifier domain;
Pssm-ID: 214605 [Multi-domain] Cd Length: 55 Bit Score: 42.20 E-value: 3.92e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 194363725 187 EEEWVRPVMKR-----DKQVLLHWGYYPDSYDTWIPASEIE 222
Cdd:smart00298 1 EYEVEKILDHRwkkkgELEYLVKWKGYSYSEDTWEPEENLL 41
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1006-1141 |
2.88e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 1006 TGAAGPPAVHGLAVAPASVVPA-PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1084
Cdd:PRK07003 397 PAVTAVTGAAGAALAPKAAAAAaATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGS 476
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 194363725 1085 QQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD-PGTPLPPDPTAPS 1141
Cdd:PRK07003 477 ASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDaPAAAAPPAPEARP 534
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
727-883 |
5.93e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 5.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 727 ALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGK--------ADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATD 798
Cdd:TIGR00927 626 ALGDLSKGDVAEAEHTGERTGEEGERPTEAEGEngeesggeAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 799 EKKEPKEPR---EGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKEseksdGDPIVDPEKEKEPKEGQEEVLKEVVESEGE 875
Cdd:TIGR00927 706 HKGETEAEEvehEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAE-----GKHEVETEGDRKETEHEGETEAEGKEDEDE 780
|
....*...
gi 194363725 876 RKTKVERD 883
Cdd:TIGR00927 781 GEIQAGED 788
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465143 Cd Length: 412 Bit Score: 761.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 194363725 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 |
COG5259 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-739 |
9.08e-85 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 285.63 E-value: 9.08e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 539 SGLVPLQPKTPQGRQVD-ADTKAGRKGKE------LDDLVpETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNFGLRTD 611
Cdd:COG5259 167 RGLSPFLPWGPINQRVLgAKEIEYETHKEenyspsLKSPK-KESQGKVDELKDHSEKHPSSCSCCGNKSFNTRYHNLRAE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 612 MYT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI 675
Cdd:COG5259 246 KYNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPI 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 194363725 676 EDPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 739
Cdd:COG5259 326 EDNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM |
pfam04433 |
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid ... |
433-512 |
7.39e-37 |
|
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Pssm-ID: 461307 [Multi-domain] Cd Length: 78 Bit Score: 133.07 E-value: 7.39e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 433 FDYNSVHAIERRALPEFFNGKnkSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Cdd:pfam04433 1 SDPDKLHPIEKRLLPEFFNGK--SKTPEVYLEIRNFILNLWRENPKEYLTKTDARRALKGDVNLISRIHEFLERWGLINF 78
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
715-781 |
6.49e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 124.39 E-value: 6.49e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194363725 715 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 781
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
911-977 |
4.09e-31 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 117.23 E-value: 4.09e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 194363725 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 977
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
721-978 |
3.19e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 3.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 721 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 795
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 796 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 873
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 874 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 953
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 194363725 954 QRQQLLADRQAFHMEQLKYAEMRAR 978
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
748-978 |
9.23e-07 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 52.95 E-value: 9.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 748 RKVEEAAKVTGKADPAFGLESSGIAgttsDEPERIEESGNDEARVEGQATDEKKEPKEpREGGGAIEEEAKEKTSEAPKK 827
Cdd:pfam02029 77 KRLQEALERQKEFDPTIADEKESVA----ERKENNEEEENSSWEKEEKRDSRLGRYKE-EETEIREKEYQENKWSTEVRQ 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 828 DEEKG-KEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKH 906
Cdd:pfam02029 152 AEEEGeEEEDKSEEAEEVPTENFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHPEVKSQNGEEEVTKLKVTTKRRQGGLS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 907 LAAVEERKIKSLVallvETQMKKLEIKLRH---------------------FEELETIMDREREALEYQRQQllaDRQAF 965
Cdd:pfam02029 232 QSQEREEEAEVFL----EAEQKLEELRRRRqekeseefeklrqkqqeaeleLEELKKKREERRKLLEEEEQR---RKQEE 304
|
250
....*....|...
gi 194363725 966 HMEQLKYAEMRAR 978
Cdd:pfam02029 305 AERKLREEEEKRR 317
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
719-978 |
3.82e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 3.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 719 VASAAAKSALEEFSKMKEEVPTALveahvRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEEsgndeARVEGQATD 798
Cdd:PTZ00121 1557 LKKAEEKKKAEEAKKAEEDKNMAL-----RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE-----AKIKAEELK 1626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 799 EKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEvvesEGERKT 878
Cdd:PTZ00121 1627 KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK----EAEEAK 1702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 879 KVERdigegnlstAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQL 958
Cdd:PTZ00121 1703 KAEE---------LKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEI 1773
|
250 260
....*....|....*....|
gi 194363725 959 LADRQAFHMEQLKYAEMRAR 978
Cdd:PTZ00121 1774 RKEKEAVIEEELDEEDEKRR 1793
|
|
| CHROMO |
smart00298 |
Chromatin organization modifier domain; |
187-222 |
3.92e-05 |
|
Chromatin organization modifier domain;
Pssm-ID: 214605 [Multi-domain] Cd Length: 55 Bit Score: 42.20 E-value: 3.92e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 194363725 187 EEEWVRPVMKR-----DKQVLLHWGYYPDSYDTWIPASEIE 222
Cdd:smart00298 1 EYEVEKILDHRwkkkgELEYLVKWKGYSYSEDTWEPEENLL 41
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
729-881 |
1.64e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 729 EEFSKMKEEVPTAlveAHVRKVEEAAKVTGKADPAFGLESSGIAGT---TSDEPERIEESGN-DEARV--EGQATDE-KK 801
Cdd:PTZ00121 1233 EEAKKDAEEAKKA---EEERNNEEIRKFEEARMAHFARRQAAIKAEearKADELKKAEEKKKaDEAKKaeEKKKADEaKK 1309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 802 EPKEPREGGGAIE--EEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLK---EVVESEGER 876
Cdd:PTZ00121 1310 KAEEAKKADEAKKkaEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKkkaDAAKKKAEE 1389
|
....*
gi 194363725 877 KTKVE 881
Cdd:PTZ00121 1390 KKKAD 1394
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
725-884 |
2.10e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 725 KSALEEFSKMKEEVPTALVEAHVRKVEEAAKV---TGKADPAFGLESSgiAGTTSDEPERIEESGNDEARVEGQATDEKK 801
Cdd:PTZ00121 1639 KKKEAEEKKKAEELKKAEEENKIKAAEEAKKAeedKKKAEEAKKAEED--EKKAAEALKKEAEEAKKAEELKKKEAEEKK 1716
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 802 EPKEPREGggaiEEEAKEKTSEAPKKDEEKGKEGDS----EKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGE-R 876
Cdd:PTZ00121 1717 KAEELKKA----EEENKIKAEEAKKEAEEDKKKAEEakkdEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEkR 1792
|
....*...
gi 194363725 877 KTKVERDI 884
Cdd:PTZ00121 1793 RMEVDKKI 1800
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
1006-1141 |
2.88e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 1006 TGAAGPPAVHGLAVAPASVVPA-PAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1084
Cdd:PRK07003 397 PAVTAVTGAAGAALAPKAAAAAaATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGS 476
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 194363725 1085 QQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPD-PGTPLPPDPTAPS 1141
Cdd:PRK07003 477 ASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDaPAAAAPPAPEARP 534
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
727-883 |
5.93e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 5.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 727 ALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGK--------ADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATD 798
Cdd:TIGR00927 626 ALGDLSKGDVAEAEHTGERTGEEGERPTEAEGEngeesggeAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 799 EKKEPKEPR---EGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKEseksdGDPIVDPEKEKEPKEGQEEVLKEVVESEGE 875
Cdd:TIGR00927 706 HKGETEAEEvehEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAE-----GKHEVETEGDRKETEHEGETEAEGKEDEDE 780
|
....*...
gi 194363725 876 RKTKVERD 883
Cdd:TIGR00927 781 GEIQAGED 788
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
722-974 |
6.55e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.98 E-value: 6.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 722 AAAKSALEEFSKMKEEVPTAlvEAHVRKVEEAAKvtgKADPAfglessgiaGTTSDEPERIEESGNDEARvegQATDEKK 801
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKA--DEAKKKAEEAKK---KADAA---------KKKAEEAKKAAEAAKAEAE---AAADEAE 1360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 802 EPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESE--KSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTK 879
Cdd:PTZ00121 1361 AAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEedKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKA 1440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 880 VERDIGEgnlstaAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQ--Q 957
Cdd:PTZ00121 1441 EEAKKAD------EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKadE 1514
|
250
....*....|....*..
gi 194363725 958 LLADRQAFHMEQLKYAE 974
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAE 1531
|
|
| Myb_DNA-binding |
pfam00249 |
Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, ... |
646-673 |
7.94e-04 |
|
Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family.
Pssm-ID: 459731 [Multi-domain] Cd Length: 46 Bit Score: 38.25 E-value: 7.94e-04
10 20
....*....|....*....|....*...
gi 194363725 646 MYKDDWNKVSEHVGSRTQDECILHFLRL 673
Cdd:pfam00249 18 KLGNRWKKIAKLLPGRTDNQCKNRWQNY 45
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
702-881 |
1.53e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.27 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 702 NPVMSTVAFLASVV------DPRVASAAAKSALEEFSKMKEEVPTALVEAhvrKVEEAAKVTGKADPafGLESSGIAGTT 775
Cdd:PRK13108 257 NSFTSTFVFIGAVVyiilapKGREAPGALRGSEYVVDEALEREPAELAAA---AVASAASAVGPVGP--GEPNQPDDVAE 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 776 SDEPERIEESGNDEARVEGQ----------ATDEKKEPKEPREGGGAIEEEAkektSEAPKKDEEKGKEGDSE---KESE 842
Cdd:PRK13108 332 AVKAEVAEVTDEVAAESVVQvadrdgestpAVEETSEADIEREQPGDLAGQA----PAAHQVDAEAASAAPEEpaaLASE 407
|
170 180 190
....*....|....*....|....*....|....*....
gi 194363725 843 KSDGDPIVDPEKEkEPKEGQEEVLKEVVESEGERKTKVE 881
Cdd:PRK13108 408 AHDETEPEVPEKA-APIPDPAKPDELAVAGPGDDPAEPD 445
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
745-963 |
1.53e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 42.68 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 745 AHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKE---PREGGGAIEEEAKEKT 821
Cdd:TIGR00927 622 AKVMALGDLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEgeiPAERKGEQEGEGEIEA 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 822 SEAPKKDEEKGKEGDSEKESEkSDGDpivDPEKEKEPKEGQEEVLKEV---VESEGERKTKVERDIGEGNLSTAAAAALA 898
Cdd:TIGR00927 702 KEADHKGETEAEEVEHEGETE-AEGT---EDEGEIETGEEGEEVEDEGegeAEGKHEVETEGDRKETEHEGETEAEGKED 777
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 194363725 899 AAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ 963
Cdd:TIGR00927 778 EDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQ 842
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
769-887 |
8.84e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 39.95 E-value: 8.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 769 SGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREG-GGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGD 847
Cdd:PHA03169 102 SPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPShPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPP 181
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 194363725 848 PIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 887
Cdd:PHA03169 182 TSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQ 221
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1000-1141 |
9.53e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.97 E-value: 9.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 194363725 1000 SQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGP 1079
Cdd:PRK07764 622 AAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQP 701
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 194363725 1080 SPFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPS 1141
Cdd:PRK07764 702 APAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPA 763
|
|
| |
