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Conserved domains on  [gi|217330580|ref|NP_001136089|]
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receptor for retinol uptake STRA6 isoform a [Homo sapiens]

Protein Classification

RBP_receptor domain-containing protein( domain architecture ID 10631721)

RBP_receptor domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RBP_receptor pfam14752
Retinol binding protein receptor; Proteins in this family function as retinol binding protein ...
41-657 0e+00

Retinol binding protein receptor; Proteins in this family function as retinol binding protein receptors.


:

Pssm-ID: 464298  Cd Length: 603  Bit Score: 790.69  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580   41 PSCHTSIPPGLYHACLASLSILVLLLLAMLVRRRQLWPDCVRGRPGLPSPVDFLAGDRPRAVPAAVFMVLLSSLCLLLPD 120
Cdd:pfam14752   1 PPCDPTVDPGLFHHCSLIPSLLILLLLSFLQRRRKLCQGCLRGRPGLLSPVDFLGTTSNRWSYGAVFGALFSSLCLLLFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  121 EDALPFLTLASAPSQDgkteaprgAWKILGLFYYAALYYPLAACATAGHTAAHLLGSTLSWAHLGVQVWQRAECPQVPKI 200
Cdd:pfam14752  81 EDPLPFTVPTWASSKA--------YWKILALLYYPLLYYPLLACLTTRFRVGYVLGSLLSWTHFGVTVWQKVQCPQTPKI 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  201 YKYYSLLASLPLLLGLGFLSLWYPVQLVRSFSRRTG-AGSKGLQSSYSEEYLRNLLCRKKLGSSYHTSKHgfLSWARVCL 279
Cdd:pfam14752 153 YKYYSLLSSLPQILCLAFLSGRYPLLLVKSFRIRLGtEGSEDLASSYYAEYVKRLLRKKKPPSSSSSSKK--LSRILSWF 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  280 RHCIYTPQPGFHLPLKLVLSATLTGTAIYQVALLLLVGVVPTIQKVRAGVTTDVSYLLAGFGIVLSEDKQEVVELVKHHL 359
Cdd:pfam14752 231 QSYIYEPDPGFRFPLRLIGSAVVSFIALYQVALLLLVAVVPTLQKVRAGVTEDVAFLLAGFGIVLSEDRTEVVPIVKHYL 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  360 WALEVCYISALVLSCLLTFLVLMRSLVTHRTNLRALHRGAALDLSPLHRSPHPSRQAIFCWMSFSAYQTAFICLGLLVQQ 439
Cdd:pfam14752 311 WALEVCYISALVLACLLTVAYLFRSLVCHRKNLKALYRGDKLFLPNKFHNPRPSRPAIVCWMRYSGYQIAFICWGLLIQQ 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  440 IIFFLGTTALAFLVLMPVLHGRNLLLFRSLESSWPFWLTLALAVILQNMAAHWVFLETHDGHPQLTNRRVLYAATFLLFP 519
Cdd:pfam14752 391 VVFFLCGLFIAFLIVIPILHGRNLILLRILGSIWPFWLTLVLAVILQHVLAHFFFLQKKIGTRDLNNRRALHLFTYLLFF 470
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  520 LNVLVGAMVATWRVLLSALYNAIHLGQMDLSLLPPRAATLDPGYYTYRNFLKIEVSQSHPAMTAFCSLLLQAQSLLPRtm 599
Cdd:pfam14752 471 YNVLVGLLACIWRLLISALYNIVHLGRIDRSLLQRGVEALDPGYRTYIGMLKIEVSQSHPVMKAFCGLLLQAPKPQGR-- 548
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 217330580  600 AAPQdslrPGEEDEGMQLLQTK-DSMAKGARPGASRGRARWGLAYTLLHNPTLQVFRKT 657
Cdd:pfam14752 549 AAQK----PSDAEEGIQLLQTKkDFNAKGSGPRASRARARWLLLYTLLNNPSLIGLRKH 603
 
Name Accession Description Interval E-value
RBP_receptor pfam14752
Retinol binding protein receptor; Proteins in this family function as retinol binding protein ...
41-657 0e+00

Retinol binding protein receptor; Proteins in this family function as retinol binding protein receptors.


Pssm-ID: 464298  Cd Length: 603  Bit Score: 790.69  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580   41 PSCHTSIPPGLYHACLASLSILVLLLLAMLVRRRQLWPDCVRGRPGLPSPVDFLAGDRPRAVPAAVFMVLLSSLCLLLPD 120
Cdd:pfam14752   1 PPCDPTVDPGLFHHCSLIPSLLILLLLSFLQRRRKLCQGCLRGRPGLLSPVDFLGTTSNRWSYGAVFGALFSSLCLLLFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  121 EDALPFLTLASAPSQDgkteaprgAWKILGLFYYAALYYPLAACATAGHTAAHLLGSTLSWAHLGVQVWQRAECPQVPKI 200
Cdd:pfam14752  81 EDPLPFTVPTWASSKA--------YWKILALLYYPLLYYPLLACLTTRFRVGYVLGSLLSWTHFGVTVWQKVQCPQTPKI 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  201 YKYYSLLASLPLLLGLGFLSLWYPVQLVRSFSRRTG-AGSKGLQSSYSEEYLRNLLCRKKLGSSYHTSKHgfLSWARVCL 279
Cdd:pfam14752 153 YKYYSLLSSLPQILCLAFLSGRYPLLLVKSFRIRLGtEGSEDLASSYYAEYVKRLLRKKKPPSSSSSSKK--LSRILSWF 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  280 RHCIYTPQPGFHLPLKLVLSATLTGTAIYQVALLLLVGVVPTIQKVRAGVTTDVSYLLAGFGIVLSEDKQEVVELVKHHL 359
Cdd:pfam14752 231 QSYIYEPDPGFRFPLRLIGSAVVSFIALYQVALLLLVAVVPTLQKVRAGVTEDVAFLLAGFGIVLSEDRTEVVPIVKHYL 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  360 WALEVCYISALVLSCLLTFLVLMRSLVTHRTNLRALHRGAALDLSPLHRSPHPSRQAIFCWMSFSAYQTAFICLGLLVQQ 439
Cdd:pfam14752 311 WALEVCYISALVLACLLTVAYLFRSLVCHRKNLKALYRGDKLFLPNKFHNPRPSRPAIVCWMRYSGYQIAFICWGLLIQQ 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  440 IIFFLGTTALAFLVLMPVLHGRNLLLFRSLESSWPFWLTLALAVILQNMAAHWVFLETHDGHPQLTNRRVLYAATFLLFP 519
Cdd:pfam14752 391 VVFFLCGLFIAFLIVIPILHGRNLILLRILGSIWPFWLTLVLAVILQHVLAHFFFLQKKIGTRDLNNRRALHLFTYLLFF 470
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  520 LNVLVGAMVATWRVLLSALYNAIHLGQMDLSLLPPRAATLDPGYYTYRNFLKIEVSQSHPAMTAFCSLLLQAQSLLPRtm 599
Cdd:pfam14752 471 YNVLVGLLACIWRLLISALYNIVHLGRIDRSLLQRGVEALDPGYRTYIGMLKIEVSQSHPVMKAFCGLLLQAPKPQGR-- 548
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 217330580  600 AAPQdslrPGEEDEGMQLLQTK-DSMAKGARPGASRGRARWGLAYTLLHNPTLQVFRKT 657
Cdd:pfam14752 549 AAQK----PSDAEEGIQLLQTKkDFNAKGSGPRASRARARWLLLYTLLNNPSLIGLRKH 603
 
Name Accession Description Interval E-value
RBP_receptor pfam14752
Retinol binding protein receptor; Proteins in this family function as retinol binding protein ...
41-657 0e+00

Retinol binding protein receptor; Proteins in this family function as retinol binding protein receptors.


Pssm-ID: 464298  Cd Length: 603  Bit Score: 790.69  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580   41 PSCHTSIPPGLYHACLASLSILVLLLLAMLVRRRQLWPDCVRGRPGLPSPVDFLAGDRPRAVPAAVFMVLLSSLCLLLPD 120
Cdd:pfam14752   1 PPCDPTVDPGLFHHCSLIPSLLILLLLSFLQRRRKLCQGCLRGRPGLLSPVDFLGTTSNRWSYGAVFGALFSSLCLLLFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  121 EDALPFLTLASAPSQDgkteaprgAWKILGLFYYAALYYPLAACATAGHTAAHLLGSTLSWAHLGVQVWQRAECPQVPKI 200
Cdd:pfam14752  81 EDPLPFTVPTWASSKA--------YWKILALLYYPLLYYPLLACLTTRFRVGYVLGSLLSWTHFGVTVWQKVQCPQTPKI 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  201 YKYYSLLASLPLLLGLGFLSLWYPVQLVRSFSRRTG-AGSKGLQSSYSEEYLRNLLCRKKLGSSYHTSKHgfLSWARVCL 279
Cdd:pfam14752 153 YKYYSLLSSLPQILCLAFLSGRYPLLLVKSFRIRLGtEGSEDLASSYYAEYVKRLLRKKKPPSSSSSSKK--LSRILSWF 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  280 RHCIYTPQPGFHLPLKLVLSATLTGTAIYQVALLLLVGVVPTIQKVRAGVTTDVSYLLAGFGIVLSEDKQEVVELVKHHL 359
Cdd:pfam14752 231 QSYIYEPDPGFRFPLRLIGSAVVSFIALYQVALLLLVAVVPTLQKVRAGVTEDVAFLLAGFGIVLSEDRTEVVPIVKHYL 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  360 WALEVCYISALVLSCLLTFLVLMRSLVTHRTNLRALHRGAALDLSPLHRSPHPSRQAIFCWMSFSAYQTAFICLGLLVQQ 439
Cdd:pfam14752 311 WALEVCYISALVLACLLTVAYLFRSLVCHRKNLKALYRGDKLFLPNKFHNPRPSRPAIVCWMRYSGYQIAFICWGLLIQQ 390
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  440 IIFFLGTTALAFLVLMPVLHGRNLLLFRSLESSWPFWLTLALAVILQNMAAHWVFLETHDGHPQLTNRRVLYAATFLLFP 519
Cdd:pfam14752 391 VVFFLCGLFIAFLIVIPILHGRNLILLRILGSIWPFWLTLVLAVILQHVLAHFFFLQKKIGTRDLNNRRALHLFTYLLFF 470
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 217330580  520 LNVLVGAMVATWRVLLSALYNAIHLGQMDLSLLPPRAATLDPGYYTYRNFLKIEVSQSHPAMTAFCSLLLQAQSLLPRtm 599
Cdd:pfam14752 471 YNVLVGLLACIWRLLISALYNIVHLGRIDRSLLQRGVEALDPGYRTYIGMLKIEVSQSHPVMKAFCGLLLQAPKPQGR-- 548
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 217330580  600 AAPQdslrPGEEDEGMQLLQTK-DSMAKGARPGASRGRARWGLAYTLLHNPTLQVFRKT 657
Cdd:pfam14752 549 AAQK----PSDAEEGIQLLQTKkDFNAKGSGPRASRARARWLLLYTLLNNPSLIGLRKH 603
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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