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Conserved domains on  [gi|219283252|ref|NP_001136413|]
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EKC/KEOPS complex subunit GON7 isoform 1 [Rattus norvegicus]

Protein Classification

EKC/KEOPS complex subunit GON7( domain architecture ID 10634111)

EKC/KEOPS complex subunit GON7, a DUF4611 domain-containing protein, is a component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4611 pfam15387
Domain of unknown function (DUF4611); This family of proteins is found in eukaryotes. Proteins ...
 3-95 4.34e-30

Domain of unknown function (DUF4611); This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 100 amino acids in length. There is a conserved AKR sequence motif.


:

Pssm-ID: 464694  Cd Length: 96  Bit Score: 102.59  E-value: 4.34e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219283252   3 LSGEYVGGDGEPQRLQVSCEASSDADPLQSLSAGVVRMKELVAEFFGTLVEQDAQG-VAEDPEDALDGDED--DAEDENN 79
Cdd:pfam15387  1 LLGELKGRDGQRQQLRVPCEANGDADPLQSLLSGVAQMRELVSEFLGPLVEQEAQGdVAAAPDDALDGDDEddAEDENNI 80

                         90
                 ....*....|....*.
gi 219283252  80 SGRTNSDGPSAKRPKP 95
Cdd:pfam15387 81 DNRTNSDGPSAKRPKP 96
 
Name Accession Description Interval E-value
DUF4611 pfam15387
Domain of unknown function (DUF4611); This family of proteins is found in eukaryotes. Proteins ...
 3-95 4.34e-30

Domain of unknown function (DUF4611); This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 100 amino acids in length. There is a conserved AKR sequence motif.


Pssm-ID: 464694  Cd Length: 96  Bit Score: 102.59  E-value: 4.34e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219283252   3 LSGEYVGGDGEPQRLQVSCEASSDADPLQSLSAGVVRMKELVAEFFGTLVEQDAQG-VAEDPEDALDGDED--DAEDENN 79
Cdd:pfam15387  1 LLGELKGRDGQRQQLRVPCEANGDADPLQSLLSGVAQMRELVSEFLGPLVEQEAQGdVAAAPDDALDGDDEddAEDENNI 80

                         90
                 ....*....|....*.
gi 219283252  80 SGRTNSDGPSAKRPKP 95
Cdd:pfam15387 81 DNRTNSDGPSAKRPKP 96
 
Name Accession Description Interval E-value
DUF4611 pfam15387
Domain of unknown function (DUF4611); This family of proteins is found in eukaryotes. Proteins ...
 3-95 4.34e-30

Domain of unknown function (DUF4611); This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 100 amino acids in length. There is a conserved AKR sequence motif.


Pssm-ID: 464694  Cd Length: 96  Bit Score: 102.59  E-value: 4.34e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219283252   3 LSGEYVGGDGEPQRLQVSCEASSDADPLQSLSAGVVRMKELVAEFFGTLVEQDAQG-VAEDPEDALDGDED--DAEDENN 79
Cdd:pfam15387  1 LLGELKGRDGQRQQLRVPCEANGDADPLQSLLSGVAQMRELVSEFLGPLVEQEAQGdVAAAPDDALDGDDEddAEDENNI 80

                         90
                 ....*....|....*.
gi 219283252  80 SGRTNSDGPSAKRPKP 95
Cdd:pfam15387 81 DNRTNSDGPSAKRPKP 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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