NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|222418567|ref|NP_001138454|]
View 

coiled-coil domain-containing protein 169 isoform b [Homo sapiens]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF4600 super family cl21210
Domain of unknown function (DUF4600);
1-79 3.84e-37

Domain of unknown function (DUF4600);


The actual alignment was detected with superfamily member pfam15372:

Pssm-ID: 434673 [Multi-domain]  Cd Length: 128  Bit Score: 123.26  E-value: 3.84e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 222418567    1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQLPRMQENLVK 79
Cdd:pfam15372  50 MSVESLKKLLKQLEKEKRSLENQLKDYELRLEQESKAYHKTNDERRAYLAEIAQLSGLDQVSKRQQMDQLHRMKENPVK 128
 
Name Accession Description Interval E-value
DUF4600 pfam15372
Domain of unknown function (DUF4600);
1-79 3.84e-37

Domain of unknown function (DUF4600);


Pssm-ID: 434673 [Multi-domain]  Cd Length: 128  Bit Score: 123.26  E-value: 3.84e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 222418567    1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQLPRMQENLVK 79
Cdd:pfam15372  50 MSVESLKKLLKQLEKEKRSLENQLKDYELRLEQESKAYHKTNDERRAYLAEIAQLSGLDQVSKRQQMDQLHRMKENPVK 128
 
Name Accession Description Interval E-value
DUF4600 pfam15372
Domain of unknown function (DUF4600);
1-79 3.84e-37

Domain of unknown function (DUF4600);


Pssm-ID: 434673 [Multi-domain]  Cd Length: 128  Bit Score: 123.26  E-value: 3.84e-37
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 222418567    1 MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQLPRMQENLVK 79
Cdd:pfam15372  50 MSVESLKKLLKQLEKEKRSLENQLKDYELRLEQESKAYHKTNDERRAYLAEIAQLSGLDQVSKRQQMDQLHRMKENPVK 128
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH