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Conserved domains on  [gi|223468566|ref|NP_001138617|]
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neutral amino acid transporter B(0) isoform 3 [Homo sapiens]

Protein Classification

dicarboxylate/amino acid:cation symporter( domain architecture ID 10003465)

dicarboxylate/amino acid:cation symporter facilitates H+ or Na+ symport with C4-dicarboxylates, dicarboxylic amino acids (aspartate, glutamate) or other amino acids; belongs to the sodium:dicarboxylate symporter family

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GltP COG1301
Na+/H+-dicarboxylate symporter [Energy production and conversion];
28-277 5.59e-92

Na+/H+-dicarboxylate symporter [Energy production and conversion];


:

Pssm-ID: 440912 [Multi-domain]  Cd Length: 406  Bit Score: 280.08  E-value: 5.59e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMeDVGLLFArLGKYILCC 107
Cdd:COG1301  140 NMLQIIFFAILFGIALAALGEKGKPLLDFFESLSEVMFKIVGWVMKLAPIGVFALIAATVAKY-GLDALGS-LGKLVLTV 217

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 108 LLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDG 187
Cdd:COG1301  218 YLALLLHLFVVLPLILRLLTGLSPLKFLRAIRPALLLAFSTSSSEATLPVTMEKAEEKLGVSKSVASFVLPLGATINMDG 297

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 188 AALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTV 267
Cdd:COG1301  298 TAIYQAVAALFIAQAYGIDLSLGQQLTIVLTAVLASIGAAGVPGAGLVMLAAVLSAVGLPLEGIALILGIDRILDMARTA 377

                        250
                 ....*....|
gi 223468566 268 LNVEGDALGA 277
Cdd:COG1301  378 VNVTGDAVAT 387
 
Name Accession Description Interval E-value
GltP COG1301
Na+/H+-dicarboxylate symporter [Energy production and conversion];
28-277 5.59e-92

Na+/H+-dicarboxylate symporter [Energy production and conversion];


Pssm-ID: 440912 [Multi-domain]  Cd Length: 406  Bit Score: 280.08  E-value: 5.59e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMeDVGLLFArLGKYILCC 107
Cdd:COG1301  140 NMLQIIFFAILFGIALAALGEKGKPLLDFFESLSEVMFKIVGWVMKLAPIGVFALIAATVAKY-GLDALGS-LGKLVLTV 217

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 108 LLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDG 187
Cdd:COG1301  218 YLALLLHLFVVLPLILRLLTGLSPLKFLRAIRPALLLAFSTSSSEATLPVTMEKAEEKLGVSKSVASFVLPLGATINMDG 297

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 188 AALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTV 267
Cdd:COG1301  298 TAIYQAVAALFIAQAYGIDLSLGQQLTIVLTAVLASIGAAGVPGAGLVMLAAVLSAVGLPLEGIALILGIDRILDMARTA 377

                        250
                 ....*....|
gi 223468566 268 LNVEGDALGA 277
Cdd:COG1301  378 VNVTGDAVAT 387
SDF pfam00375
Sodium:dicarboxylate symporter family;
28-280 6.42e-88

Sodium:dicarboxylate symporter family;


Pssm-ID: 425646 [Multi-domain]  Cd Length: 388  Bit Score: 269.01  E-value: 6.42e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566   28 NILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMedVGLLFARLGKYILCC 107
Cdd:pfam00375 135 NVLAVIVFAILFGIALAALGEKGEPLLNFIESLQEVMMKVIGWVMKLAPIGVFALIANTVGTY--GLGILSSLAKFLLVV 212

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  108 LLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDG 187
Cdd:pfam00375 213 YLGLAIHLLIVYPLLIKFLGKVNPFKFLKKMLPALLTAFSTASSAATLPVTLECAEKNLGVSESIASFVLPLGATINMDG 292

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  188 AALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTV 267
Cdd:pfam00375 293 TAIYLAVAAIFIAQAYGVDLSFGQQLTLVLTATLASIGAAGVPGGGLVALGLVLSALGLPLEGIALILAIDRLLDMFRTA 372

                         250
                  ....*....|...
gi 223468566  268 LNVEGDALGAGLL 280
Cdd:pfam00375 373 VNVTGDAAAAVIV 385
PRK01663 PRK01663
C4-dicarboxylate transporter DctA; Reviewed
 28-261 1.49e-30

C4-dicarboxylate transporter DctA; Reviewed


Pssm-ID: 234968 [Multi-domain]  Cd Length: 428  Bit Score: 120.01  E-value: 1.49e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGI---MFLVAGKIvemeDVGLLfARLGKYI 104
Cdd:PRK01663 149 DILQVLLFAVLFGFALARLGEKGKPVFDFIESLSHVLFGIVNMIMKLAPIGAfgaMAFTIGKY----GVGSL-VQLGQLI 223

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 105 LCCLLGHAIHGLLVLPLI--YFLFtrkNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEeNNGVAKHISRFILPIGAT 182
Cdd:PRK01663 224 GCFYITCILFVFVVLGAIarLTGF---SIFKFIRYIKEELLIVLGTSSSESALPRMMEKME-KLGCKKSVVGLVIPTGYS 299

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 183 VNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVN-LPVDHISLILAVDWLV 261
Cdd:PRK01663 300 FNLDGTSIYLTMAAVFIAQATNTPLSIGHQITLLAVLLLTSKGAAGVTGSGFIVLAATLSAVPhIPVAGLALILGIDRFM 379
 
Name Accession Description Interval E-value
GltP COG1301
Na+/H+-dicarboxylate symporter [Energy production and conversion];
28-277 5.59e-92

Na+/H+-dicarboxylate symporter [Energy production and conversion];


Pssm-ID: 440912 [Multi-domain]  Cd Length: 406  Bit Score: 280.08  E-value: 5.59e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMeDVGLLFArLGKYILCC 107
Cdd:COG1301  140 NMLQIIFFAILFGIALAALGEKGKPLLDFFESLSEVMFKIVGWVMKLAPIGVFALIAATVAKY-GLDALGS-LGKLVLTV 217

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 108 LLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDG 187
Cdd:COG1301  218 YLALLLHLFVVLPLILRLLTGLSPLKFLRAIRPALLLAFSTSSSEATLPVTMEKAEEKLGVSKSVASFVLPLGATINMDG 297

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 188 AALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTV 267
Cdd:COG1301  298 TAIYQAVAALFIAQAYGIDLSLGQQLTIVLTAVLASIGAAGVPGAGLVMLAAVLSAVGLPLEGIALILGIDRILDMARTA 377

                        250
                 ....*....|
gi 223468566 268 LNVEGDALGA 277
Cdd:COG1301  378 VNVTGDAVAT 387
SDF pfam00375
Sodium:dicarboxylate symporter family;
28-280 6.42e-88

Sodium:dicarboxylate symporter family;


Pssm-ID: 425646 [Multi-domain]  Cd Length: 388  Bit Score: 269.01  E-value: 6.42e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566   28 NILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMedVGLLFARLGKYILCC 107
Cdd:pfam00375 135 NVLAVIVFAILFGIALAALGEKGEPLLNFIESLQEVMMKVIGWVMKLAPIGVFALIANTVGTY--GLGILSSLAKFLLVV 212

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  108 LLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDG 187
Cdd:pfam00375 213 YLGLAIHLLIVYPLLIKFLGKVNPFKFLKKMLPALLTAFSTASSAATLPVTLECAEKNLGVSESIASFVLPLGATINMDG 292

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  188 AALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTV 267
Cdd:pfam00375 293 TAIYLAVAAIFIAQAYGVDLSFGQQLTLVLTATLASIGAAGVPGGGLVALGLVLSALGLPLEGIALILAIDRLLDMFRTA 372

                         250
                  ....*....|...
gi 223468566  268 LNVEGDALGAGLL 280
Cdd:pfam00375 373 VNVTGDAAAAVIV 385
PRK01663 PRK01663
C4-dicarboxylate transporter DctA; Reviewed
 28-261 1.49e-30

C4-dicarboxylate transporter DctA; Reviewed


Pssm-ID: 234968 [Multi-domain]  Cd Length: 428  Bit Score: 120.01  E-value: 1.49e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGI---MFLVAGKIvemeDVGLLfARLGKYI 104
Cdd:PRK01663 149 DILQVLLFAVLFGFALARLGEKGKPVFDFIESLSHVLFGIVNMIMKLAPIGAfgaMAFTIGKY----GVGSL-VQLGQLI 223

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 105 LCCLLGHAIHGLLVLPLI--YFLFtrkNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEeNNGVAKHISRFILPIGAT 182
Cdd:PRK01663 224 GCFYITCILFVFVVLGAIarLTGF---SIFKFIRYIKEELLIVLGTSSSESALPRMMEKME-KLGCKKSVVGLVIPTGYS 299

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 183 VNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVN-LPVDHISLILAVDWLV 261
Cdd:PRK01663 300 FNLDGTSIYLTMAAVFIAQATNTPLSIGHQITLLAVLLLTSKGAAGVTGSGFIVLAATLSAVPhIPVAGLALILGIDRFM 379
gltP PRK11283
glutamate/aspartate:proton symporter; Provisional
 29-305 2.53e-26

glutamate/aspartate:proton symporter; Provisional


Pssm-ID: 183075 [Multi-domain]  Cd Length: 437  Bit Score: 108.31  E-value: 2.53e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  29 ILGLVVFAIVFGVALRKLGPE-GELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLfaRLGKYILCC 107
Cdd:PRK11283 160 MLPIIFFSVLFGLGLSSLPAThREPLVTVFRSVSETMFKVTHMVMRYAPVGVFALIAVTVANFGFASLW--PLAKLVLLV 237

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 108 LLGHAIHGLLVLPLIYFLFtRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENnGVAKHISRFILPIGATVNMDG 187
Cdd:PRK11283 238 YFAILFFALVVLGIVARLC-GLSIWILIRILKDELILAYSTASSETVLPRIIEKMEAY-GAPKSITSFVVPTGYSFNLDG 315

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 188 AALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTV 267
Cdd:PRK11283 316 STLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTA 395

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 223468566 268 LNVEGDALGAGLL---QNYVDRTESRSTEPELIQVKSELPL 305
Cdd:PRK11283 396 LNVVGNALAVLVIakwEHKFDRKKALAYEREVLGKFDKTAD 436
PRK13027 PRK13027
C4-dicarboxylate transporter DctA; Reviewed
 28-261 4.45e-26

C4-dicarboxylate transporter DctA; Reviewed


Pssm-ID: 183850 [Multi-domain]  Cd Length: 421  Bit Score: 107.45  E-value: 4.45e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVA---GK--IVEMEDVGLLFARLgk 102
Cdd:PRK13027 149 DILQVLLFSVLFGSALSLLGERAKRVNRLIDELSHVLFRIMGFIIKLAPLGVLGAIAfttGKygVGSLKQLGMLVAVF-- 226

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 103 YILCCL-----LGHA--IHGLLVLPLIYFLFTRknpyrflwgivtpLATAFGTSSSSATLPLMMKCVEeNNGVAKHISRF 175
Cdd:PRK13027 227 YLTCFVfvvvvLGAVmrLAGFSVFKLIRYLREE-------------LLIVLGTASSDAVLPQVMRKLE-HMGIKDSTVGL 292

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 176 ILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAV-NLPVDHISLI 254
Cdd:PRK13027 293 VIPTGYSFNLDGFSIYLTLAAVFIAQATNTPLSMHDLITILLVSLVTSKGAHGIPGSAIVILAATLSAIpAIPVLGLVLI 372


                 ....*..
gi 223468566 255 LAVDWLV 261
Cdd:PRK13027 373 LPVDWFM 379
TcyP COG1823
L-cystine transporter TcyP, sodium:dicarboxylate symporter family [Amino acid transport and ...
 29-280 1.73e-21

L-cystine transporter TcyP, sodium:dicarboxylate symporter family [Amino acid transport and metabolism];


Pssm-ID: 441428  Cd Length: 463  Bit Score: 94.51  E-value: 1.73e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  29 ILGLVVFAIVFGVA---LRKLGPE-GELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAgKIVEMEDVGLLfARLGKYI 104
Cdd:COG1823  187 TIAVVIFAAFLGIAalgLRRKKPEqAETFLKGIDALQAIVMRLVRLVLRLTPYGVLALMT-KVVATSDFADI-LNLGKFV 264

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 105 LCCLLGHAIhgLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVN 184
Cdd:COG1823  265 VASYVALII--MFIVHLLLLALAGLNPLTYFKKVWPVLTFAFTSRSSAGTIPLNIETQTKRLGVPEGIANFAASFGATIG 342

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 185 MDG-AALFQCVAAVFIA-QLSQQSLDFVKIITILVTATASSVGAAGIpaGGVLTLA--IILEAVNLPVDHISLILAVDWL 260
Cdd:COG1823  343 QNGcAGIYPAMLAVMIApTVGINPLDPSFILTLIAVVTISSFGVAGV--GGGATFAalIVLSAMGLPVALAGLLISIEPL 420

                        250       260
                 ....*....|....*....|
gi 223468566 261 VDRSCTVLNVEGdALGAGLL 280
Cdd:COG1823  421 IDMGRTALNVSG-SMTAGTV 439
PRK13628 PRK13628
serine/threonine transporter SstT; Provisional
 28-237 1.53e-19

serine/threonine transporter SstT; Provisional


Pssm-ID: 184190 [Multi-domain]  Cd Length: 402  Bit Score: 88.38  E-value: 1.53e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGElliRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEdvgllFARLGKY--IL 105
Cdd:PRK13628 146 NYIGILAWAIGLGLALRHASDTTK---NVVNDLSEAVSQIVKWVIRFAPIGIFGLVASTLAETG-----FSALAGYaqLL 217

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 106 CCLLG-HAIHGLLVLPLIYFLFTRKNPYRFLW------GIvtplaTAFGTSSSSATLPLMMKCVEEnNGVAKHISRFILP 178
Cdd:PRK13628 218 AVLVGcMLFVALVVNPLIVFWKIRRNPYPLVFtclresGV-----TAFFTRSSAANIPVNMALCEK-LGLDEDTYSVSIP 291

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 223468566 179 IGATVNMDGAALFQCV---AAVFIAQLsqqSLDFVKIITILVTATASSVGAAGIpAGGVLTL 237
Cdd:PRK13628 292 LGATINMAGAAITITVltlAAVHTLGI---PVDLPTALLLSVVAAISACGASGV-AGGSLLL 349
SstT COG3633
Na+/serine and Na+/threonine symporter SstT [Amino acid transport and metabolism];
28-237 5.72e-18

Na+/serine and Na+/threonine symporter SstT [Amino acid transport and metabolism];


Pssm-ID: 442850  Cd Length: 406  Bit Score: 84.07  E-value: 5.72e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGELLirfFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEmedVGllFARLGKY--IL 105
Cdd:COG3633  145 NYIGILAWAIGLGLALRHASDTTKTV---LSDLSDAVSKIVRWVIRFAPLGIFGLVASTVAT---TG--FSALLGYahLL 216

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 106 CCLLG-HAIHGLLVLPLIYFLFTRKNPYRFLW------GIvtplaTAFGTSSSSATLPLMMKCVEEnNGVAKHISRFILP 178
Cdd:COG3633  217 AVLVGcMLFVALVVNPLIVFLKIRRNPYPLVFtclresGI-----TAFFTRSSAANIPVNMALCEK-LGLDEDTYSVSIP 290

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 223468566 179 IGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIpAGGVLTL 237
Cdd:COG3633  291 LGATINMAGAAITITVLTLAAVHTLGIEVDLPTALLLSVVAAVSACGASGV-AGGSLLL 348
PRK14695 PRK14695
serine/threonine transporter SstT; Provisional
 28-275 1.45e-17

serine/threonine transporter SstT; Provisional


Pssm-ID: 173158  Cd Length: 319  Bit Score: 82.02  E-value: 1.45e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566  28 NILGLVVFAIVFGVALRKLGPEGELLIRffnSFNEATMVLVSWIMWYAPVGIMFLVAgKIVEMEDVGLLfARLGKYILCC 107
Cdd:PRK14695  60 NYIGILSWAVIFGIAMREASKNSKELLK---TIADVTSKIVEWIINLAPFGILGLVF-KTISDKGVGSL-ANYGILLVLL 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 108 LLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIV-TPLATAFGTSSSSATLPLMMKCVEEnNGVAKHISRFILPIGATVNMD 186
Cdd:PRK14695 135 VTTMLFVAPVVNPLIAFFFMRRNPYPLVWNCLrVSGVTAFFTRSSATNIPVNMKLCHD-LGLNPDTYSVSIPLGSTINMA 213

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223468566 187 GAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLV----D 262
Cdd:PRK14695 214 GVAITINLLTLVTVNTLGIPVDFATAFVLSVVAAISACGASGIAGGSLLLIPVACSLFGISNDIAIQIVGVGFVIgviqD 293

                        250
                 ....*....|...
gi 223468566 263 RSCTVLNVEGDAL 275
Cdd:PRK14695 294 SCETALNSSTDVL 306
COG3298 COG3298
Predicted 3'-5' exonuclease related to the exonuclease domain of PolB [Replication, ...
 33-70 9.59e-03

Predicted 3'-5' exonuclease related to the exonuclease domain of PolB [Replication, recombination and repair];


Pssm-ID: 442527  Cd Length: 211  Bit Score: 36.83  E-value: 9.59e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 223468566  33 VVFAIVFGVALRKLG----PEGELLIRFFNSFNEATMVLVSW 70
Cdd:COG3298   62 CVLRDGDGFKVWSLGdpddDEAELIQRFFDGIEKYTPQLVSW 103
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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