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Conserved domains on  [gi|227430287|ref|NP_001153047|]
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amiloride-sensitive sodium channel subunit alpha isoform 3 [Homo sapiens]

Protein Classification

epithelial sodium channel family protein( domain architecture ID 10017482)

epithelial sodium channel (ENaC) family protein acts as sodium channel transporter; similar to Homo sapiens acid-sensing ion channel 1 and amiloride-sensitive sodium channel subunits alpha/beta/gamma/delta

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
77-670 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 1000.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287   77 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 156
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  157 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 235
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  236 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 315
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  316 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 395
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  396 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 475
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  476 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 555
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  556 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 635
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 227430287  636 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 670
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
 
Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
77-670 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 1000.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287   77 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 156
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  157 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 235
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  236 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 315
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  316 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 395
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  396 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 475
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  476 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 555
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  556 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 635
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 227430287  636 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 670
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
ASC pfam00858
Amiloride-sensitive sodium channel;
85-595 1.44e-114

Amiloride-sensitive sodium channel;


Pssm-ID: 459966 [Multi-domain]  Cd Length: 439  Bit Score: 351.47  E-value: 1.44e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287   85 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNIN--LNSDKLVFPAVTICTLNPYR 162
Cdd:pfam00858   1 FCENTSIHG-VRYIKSKDGFLRRLFWLLLFLASLIFLIYLISLLFEKYLSYPVITVIEeiLYVWNVPFPAVTICNLNPFR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  163 YPEIKEELEELDRITEQTLFDLykyssfttlvagsrsrrdlrgtlphplqrlrvpppphgarrarsvasslrdnnpqvdw 242
Cdd:pfam00858  80 YSALKELSLFYDNLSFLLYLKF---------------------------------------------------------- 101
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  243 kdwkigfqlcNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFN--QVSCNqANYSHF 320
Cdd:pfam00858 102 ----------KFLEKILKSLTSNTEELEDELKLLLDFTNELLNSLSGYILNLGLRCEDLIVSCSFGgeKEDCS-ANFTPI 170
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  321 HHpMYGNCYTFNDKNNSNLWMSSM---PGINNGLSLMLRAEQND-FIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGV 396
Cdd:pfam00858 171 LT-EYGNCYTFNSKDNGSKLYPRRlkgAGSGRGLSLILNIQQSEtYSPLDYQAAGFKVSIHSPGEPPDVDKRGFSVPPGT 249
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  397 ETSISMRKETLDRLGGDYGDCTKNgsdvPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVeycdyrKHSSW 476
Cdd:pfam00858 250 ETSVGIQPTEITTLKRPYGNCTFD----DEKLLYFKSYSQSNCLLECRQNYILKLCGCVPFFYPLPPGT------KTGAD 319
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  477 GYCYYKLQVDFSS--DHLGCFtKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKEL 554
Cdd:pfam00858 320 IPCLLNYEDHLLEvnEGLSCQ-DCLPPCNETEYETEISYSTWPSLSSQLFLLYYELSTYNNSSSTIRENLAKLNIYFKEL 398
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 227430287  555 NYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 595
Cdd:pfam00858 399 NYETYRRSPAYTWTDLLSSIGGQLGLFLGASVLSLVEIVYF 439
PHA02682 PHA02682
ORF080 virion core protein; Provisional
630-688 2.56e-05

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 46.78  E-value: 2.56e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 227430287 630 STLASSPPshfCPHPMSLSLSQPGPAPSPALTAP------PPAYATLGPRPSPGGSAGASSSTCP 688
Cdd:PHA02682  80 SPLAPSPA---CAAPAPACPACAPAAPAPAVTCPapapacPPATAPTCPPPAVCPAPARPAPACP 141
 
Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
77-670 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 1000.79  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287   77 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 156
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  157 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 235
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  236 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 315
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  316 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 395
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  396 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 475
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  476 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 555
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  556 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 635
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 227430287  636 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 670
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
ASC pfam00858
Amiloride-sensitive sodium channel;
85-595 1.44e-114

Amiloride-sensitive sodium channel;


Pssm-ID: 459966 [Multi-domain]  Cd Length: 439  Bit Score: 351.47  E-value: 1.44e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287   85 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNIN--LNSDKLVFPAVTICTLNPYR 162
Cdd:pfam00858   1 FCENTSIHG-VRYIKSKDGFLRRLFWLLLFLASLIFLIYLISLLFEKYLSYPVITVIEeiLYVWNVPFPAVTICNLNPFR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  163 YPEIKEELEELDRITEQTLFDLykyssfttlvagsrsrrdlrgtlphplqrlrvpppphgarrarsvasslrdnnpqvdw 242
Cdd:pfam00858  80 YSALKELSLFYDNLSFLLYLKF---------------------------------------------------------- 101
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  243 kdwkigfqlcNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFN--QVSCNqANYSHF 320
Cdd:pfam00858 102 ----------KFLEKILKSLTSNTEELEDELKLLLDFTNELLNSLSGYILNLGLRCEDLIVSCSFGgeKEDCS-ANFTPI 170
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  321 HHpMYGNCYTFNDKNNSNLWMSSM---PGINNGLSLMLRAEQND-FIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGV 396
Cdd:pfam00858 171 LT-EYGNCYTFNSKDNGSKLYPRRlkgAGSGRGLSLILNIQQSEtYSPLDYQAAGFKVSIHSPGEPPDVDKRGFSVPPGT 249
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  397 ETSISMRKETLDRLGGDYGDCTKNgsdvPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVeycdyrKHSSW 476
Cdd:pfam00858 250 ETSVGIQPTEITTLKRPYGNCTFD----DEKLLYFKSYSQSNCLLECRQNYILKLCGCVPFFYPLPPGT------KTGAD 319
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  477 GYCYYKLQVDFSS--DHLGCFtKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKEL 554
Cdd:pfam00858 320 IPCLLNYEDHLLEvnEGLSCQ-DCLPPCNETEYETEISYSTWPSLSSQLFLLYYELSTYNNSSSTIRENLAKLNIYFKEL 398
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 227430287  555 NYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 595
Cdd:pfam00858 399 NYETYRRSPAYTWTDLLSSIGGQLGLFLGASVLSLVEIVYF 439
deg-1 TIGR00867
degenerin; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of ...
85-595 2.84e-67

degenerin; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the invertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273309 [Multi-domain]  Cd Length: 600  Bit Score: 232.04  E-value: 2.84e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287   85 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTICTLNPYRY- 163
Cdd:TIGR00867   2 FCYKTTFHG-IPMVATASNSFSRAFWVALFLICLLMFAYQAYILISKYFQYEKIVDIQLKFETAPFPAITVCNLNPYKYs 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  164 -----PEIKEELE------------ELDRITEQTLFDLYKYSSFTTLVAgsRSRRDLRGTLPHPLQRLRVPPPPHGARRA 226
Cdd:TIGR00867  81 lvrsvPEISETLDafdraigasnksEGDELELITERKLHSKTRRQKLKA--KGAPELEDGMYEPVFSQCTCDEQGMGECK 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  227 RSVASSLRDNN------------------PQVDWKDWKIGfqLCNQN--------------KSDCFYQTYS------SGV 268
Cdd:TIGR00867 159 SQRSAEPRGHTsrcicaydrvtgdawpcfPYSTWTTKKCS--LCNDNgfcpkpnkkgakeqKDPCLCQSESnhcvshPGK 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  269 DAVREWYRFHYINILSRLPETLPSLEED---------------------------------------TLGNFIFACRFNQ 309
Cdd:TIGR00867 237 GIIREIWPNLENNDPTTGKPTTEAPETLealgfgnmtdevaittqakenlifamaalsdkarealsyTKHELILKCSFNG 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  310 VSCN-QANYSHFHHPMYGNCYTFNDKNNSNLwMSSMPGINNGLSLMLRAEQNDFIPLlSTVTGARVMVHGQDEPAFMDDG 388
Cdd:TIGR00867 317 KPCDiDRDFTLHIDPVFGNCYTFNYNRSVNL-SSSRAGPMYGLRLLLFVNQSDYLPT-TEAAGVRLTIHDKDEFPFPDTF 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  389 GFNLRPGVETSISMRKETLDRLGGDYGDCTKNGSDVP-VENLYpsKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEY 467
Cdd:TIGR00867 395 GYSAPTGYISSFGVRLKQMSRLPAPYGNCVDTGKDSSyIYKGY--IYSPEGCHRSCFQRLIIAKCGCADPRFPVPEGTRH 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287  468 CD---------YRKHSSWgycyyklQVDFSSDHLGCftKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVN 538
Cdd:TIGR00867 473 CQafnktdrecLETLTGD-------LGELHHSIFKC--RCQQPCQESIYTTTYSAAKWPSGSLKITLGSCDSNTASECNE 543
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 227430287  539 NKRNGVAKVNIFFKELNYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 595
Cdd:TIGR00867 544 YYRENAAMIEVFYEQLNYELLTESEAYTLVNLIADFGGQLGLWLGASVITVCEFVFL 600
PHA02682 PHA02682
ORF080 virion core protein; Provisional
630-688 2.56e-05

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 46.78  E-value: 2.56e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 227430287 630 STLASSPPshfCPHPMSLSLSQPGPAPSPALTAP------PPAYATLGPRPSPGGSAGASSSTCP 688
Cdd:PHA02682  80 SPLAPSPA---CAAPAPACPACAPAAPAPAVTCPapapacPPATAPTCPPPAVCPAPARPAPACP 141
PUMA pfam15826
Bcl-2-binding component 3, p53 upregulated modulator of apoptosis; PUMA (p53 upregulated ...
636-692 3.03e-03

Bcl-2-binding component 3, p53 upregulated modulator of apoptosis; PUMA (p53 upregulated modulator of apoptosis) is a family of eukaryotic proteins that are a target for activation by p53. The proteins contain BH3 domains and are induced in cells after p53 activation. They bind to Bcl-2, localize to the mitochondria to induce cytochrome c release, and activate the rapid induction of apoptosis.


Pssm-ID: 374148 [Multi-domain]  Cd Length: 189  Bit Score: 39.55  E-value: 3.03e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 227430287  636 PPSHFCPHPMSLSLSQPG-----------PAPSPALTAPPP---AYATLGPRPSPGGSAGASSSTCPLGGP 692
Cdd:pfam15826  25 PLGRLVPSAVSCGLCEPGlnprvagpsllPAPGAALAPPSPppvWVSCTSQPRAYGGPRWRRRAPRPLAGP 95
PLN02258 PLN02258
9-cis-epoxycarotenoid dioxygenase NCED
613-676 3.26e-03

9-cis-epoxycarotenoid dioxygenase NCED


Pssm-ID: 215145 [Multi-domain]  Cd Length: 590  Bit Score: 40.84  E-value: 3.26e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430287 613 SRYWSPGRGGRGAQEVASTLASSPPSHFCPHPMS------LSLSQPGPAPSPALTAPPPAYATLGPRPSP 676
Cdd:PLN02258   3 SSNPTSRSQSHASSSSSSSSQSSPPSSTSPRPRRrkpsasSLLHTPSILPLPKLSSPSPPSVTLPPAATT 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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