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Conserved domains on  [gi|324120968|ref|NP_001191220|]
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mucin-1 isoform 15 precursor [Homo sapiens]

Protein Classification

SEA domain-containing protein( domain architecture ID 10640846)

SEA domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SEA smart00200
Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating ...
 62-138 5.40e-21

Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating or binding carbohydrate sidechains.


:

Pssm-ID: 214554  Cd Length: 121  Bit Score: 84.77  E-value: 5.40e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324120968    62 AFLQIYKQG----GFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQFNQYKTEAAsrYNLTISDVSVSDVPFPFSAQ 137
Cdd:smart00200  43 LLEQIYGKTdlkpDFVGTEVIEFRNGSVVVDLGLLFNEGVTNGQDVEEDLLQVIKQAA--YSLKITNVNVVDVLDPDSAD 120


                   .
gi 324120968   138 S 138
Cdd:smart00200 121 S 121
 
Name Accession Description Interval E-value
SEA smart00200
Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating ...
 62-138 5.40e-21

Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating or binding carbohydrate sidechains.


Pssm-ID: 214554  Cd Length: 121  Bit Score: 84.77  E-value: 5.40e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324120968    62 AFLQIYKQG----GFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQFNQYKTEAAsrYNLTISDVSVSDVPFPFSAQ 137
Cdd:smart00200  43 LLEQIYGKTdlkpDFVGTEVIEFRNGSVVVDLGLLFNEGVTNGQDVEEDLLQVIKQAA--YSLKITNVNVVDVLDPDSAD 120


                   .
gi 324120968   138 S 138
Cdd:smart00200 121 S 121
 
Name Accession Description Interval E-value
SEA smart00200
Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating ...
 62-138 5.40e-21

Domain found in sea urchin sperm protein, enterokinase, agrin; Proposed function of regulating or binding carbohydrate sidechains.


Pssm-ID: 214554  Cd Length: 121  Bit Score: 84.77  E-value: 5.40e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 324120968    62 AFLQIYKQG----GFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQFNQYKTEAAsrYNLTISDVSVSDVPFPFSAQ 137
Cdd:smart00200  43 LLEQIYGKTdlkpDFVGTEVIEFRNGSVVVDLGLLFNEGVTNGQDVEEDLLQVIKQAA--YSLKITNVNVVDVLDPDSAD 120


                   .
gi 324120968   138 S 138
Cdd:smart00200 121 S 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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