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Conserved domains on  [gi|365192558|ref|NP_001242949|]
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triadin isoform 3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Asp-B-Hydro_N super family cl25755
Aspartyl beta-hydroxylase N-terminal region; This family includes the N-terminal regions of ...
 45-74 6.91e-05

Aspartyl beta-hydroxylase N-terminal region; This family includes the N-terminal regions of the junctin, junctate and aspartyl beta-hydroxylase proteins. Junctate is an integral ER/SR membrane calcium binding protein, which comes from an alternatively spliced form of the same gene that generates aspartyl beta-hydroxylase and junctin. Aspartyl beta-hydroxylase catalyzes the post-translational hydroxylation of aspartic acid or asparagine residues contained within epidermal growth factor (EGF) domains of proteins.


The actual alignment was detected with superfamily member pfam05279:

Pssm-ID: 428406  Cd Length: 66  Bit Score: 40.21  E-value: 6.91e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 365192558   45 SSPAAWLLVIALIITWSAVAIVMFDLVDYK 74
Cdd:pfam05279  10 GSFFTWFMVIALLGVWTSVAVVWFDLVDYE 39
 
Name Accession Description Interval E-value
Asp-B-Hydro_N pfam05279
Aspartyl beta-hydroxylase N-terminal region; This family includes the N-terminal regions of ...
 45-74 6.91e-05

Aspartyl beta-hydroxylase N-terminal region; This family includes the N-terminal regions of the junctin, junctate and aspartyl beta-hydroxylase proteins. Junctate is an integral ER/SR membrane calcium binding protein, which comes from an alternatively spliced form of the same gene that generates aspartyl beta-hydroxylase and junctin. Aspartyl beta-hydroxylase catalyzes the post-translational hydroxylation of aspartic acid or asparagine residues contained within epidermal growth factor (EGF) domains of proteins.


Pssm-ID: 428406  Cd Length: 66  Bit Score: 40.21  E-value: 6.91e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 365192558   45 SSPAAWLLVIALIITWSAVAIVMFDLVDYK 74
Cdd:pfam05279  10 GSFFTWFMVIALLGVWTSVAVVWFDLVDYE 39
 
Name Accession Description Interval E-value
Asp-B-Hydro_N pfam05279
Aspartyl beta-hydroxylase N-terminal region; This family includes the N-terminal regions of ...
 45-74 6.91e-05

Aspartyl beta-hydroxylase N-terminal region; This family includes the N-terminal regions of the junctin, junctate and aspartyl beta-hydroxylase proteins. Junctate is an integral ER/SR membrane calcium binding protein, which comes from an alternatively spliced form of the same gene that generates aspartyl beta-hydroxylase and junctin. Aspartyl beta-hydroxylase catalyzes the post-translational hydroxylation of aspartic acid or asparagine residues contained within epidermal growth factor (EGF) domains of proteins.


Pssm-ID: 428406  Cd Length: 66  Bit Score: 40.21  E-value: 6.91e-05
                          10        20        30
                  ....*....|....*....|....*....|
gi 365192558   45 SSPAAWLLVIALIITWSAVAIVMFDLVDYK 74
Cdd:pfam05279  10 GSFFTWFMVIALLGVWTSVAVVWFDLVDYE 39
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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