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Conserved domains on  [gi|384381468|ref|NP_001244944|]
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NADPH:adrenodoxin oxidoreductase, mitochondrial isoform 6 precursor [Homo sapiens]

Protein Classification

ferredoxin--NADP reductase domain-containing protein( domain architecture ID 1000996)

ferredoxin--NADP reductase domain-containing protein may serve as an electron transfer protein and supply electrons to P450 systems

CATH:  3.40.50.720|3.50.50.60
EC:  1.18.1.-
Gene Ontology:  GO:0004324|GO:0050661|GO:0071949
PubMed:  10998235
SCOP:  4000129

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02852 super family cl30539
ferredoxin-NADP+ reductase
 30-447 5.14e-165

ferredoxin-NADP+ reductase


The actual alignment was detected with superfamily member PLN02852:

Pssm-ID: 357415  Cd Length: 491  Bit Score: 473.80  E-value: 5.14e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  30 HHFSTQEKTP-QICVVGSGPAGFYTAQHLLKQHPQAHVDIYEKQPVPFGLVRFGVAPDHPEVKS---------------- 92
Cdd:PLN02852  17 SNSSSSTSEPlHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNvtnqfsrvatddrvsf 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  93 -------------------------YGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDL-SCDTAVILGQGN 146
Cdd:PLN02852  97 fgnvtlgrdvslselrdlyhvvvlaYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPDLkSSDTAVVLGQGN 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 147 VALDVARILLTPPEHLERTDITKAALGVLRQSRVKTVWLVGRRGPLQVAFTIKELREMIQLPGARPILDPVDFLGLQDKI 226
Cdd:PLN02852 177 VALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTLSPEDE 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 227 KEV--PRPRKRLTELLLRTATEKPGPAEAARQASAsrawgLRFFRSPQQVLPSPDG-RRAAGVRLAVTRLEGVDEATR-- 301
Cdd:PLN02852 257 EELkaSRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnGHVAGVKLERTVLEGAAGSGKqv 331

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 302 AVPTGDMEDLPCGLVLSSIGYKSRPVDpSVPFDSKLGVIPNVEGRVM-------DVPGLYCSGWVKRGPTGVIATTMTDS 374
Cdd:PLN02852 332 AVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLssasgadTEPGLYVVGWLKRGPTGIIGTNLTCA 410

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 384381468 375 FLTGQMLLQDLKAGLLP---SGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGKPREKLVDPQEMLR 447
Cdd:PLN02852 411 EETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLK 486
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
 30-447 5.14e-165

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 473.80  E-value: 5.14e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  30 HHFSTQEKTP-QICVVGSGPAGFYTAQHLLKQHPQAHVDIYEKQPVPFGLVRFGVAPDHPEVKS---------------- 92
Cdd:PLN02852  17 SNSSSSTSEPlHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNvtnqfsrvatddrvsf 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  93 -------------------------YGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDL-SCDTAVILGQGN 146
Cdd:PLN02852  97 fgnvtlgrdvslselrdlyhvvvlaYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPDLkSSDTAVVLGQGN 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 147 VALDVARILLTPPEHLERTDITKAALGVLRQSRVKTVWLVGRRGPLQVAFTIKELREMIQLPGARPILDPVDFLGLQDKI 226
Cdd:PLN02852 177 VALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTLSPEDE 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 227 KEV--PRPRKRLTELLLRTATEKPGPAEAARQASAsrawgLRFFRSPQQVLPSPDG-RRAAGVRLAVTRLEGVDEATR-- 301
Cdd:PLN02852 257 EELkaSRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnGHVAGVKLERTVLEGAAGSGKqv 331

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 302 AVPTGDMEDLPCGLVLSSIGYKSRPVDpSVPFDSKLGVIPNVEGRVM-------DVPGLYCSGWVKRGPTGVIATTMTDS 374
Cdd:PLN02852 332 AVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLssasgadTEPGLYVVGWLKRGPTGIIGTNLTCA 410

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 384381468 375 FLTGQMLLQDLKAGLLP---SGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGKPREKLVDPQEMLR 447
Cdd:PLN02852 411 EETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLK 486
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 41-367 1.50e-23

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 102.14  E-value: 1.50e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  41 ICVVGSGPAGFYTAQHLLKQ-HPqahVDIYEKQPVPFGLVRFGVaPDHPEVKSY-------------------------- 93
Cdd:COG0493  124 VAVVGSGPAGLAAAYQLARAgHE---VTVFEALDKPGGLLRYGI-PEFRLPKDVldreieliealgvefrtnvevgkdit 199

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  94 ---------------GAEDHRALEIPGEELPGVCSARAFVGWYNGlpENQELEPDLSCDTAVILGQGNVALDVARILLtp 158
Cdd:COG0493  200 ldelleefdavflatGAGKPRDLGIPGEDLKGVHSAMDFLTAVNL--GEAPDTILAVGKRVVVIGGGNTAMDCARTAL-- 275

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 159 pehleRtditkaaLGvlrqsrVKTVWLVGRRGPLQVAFTIKELREmiqlpgarpildpvdflGLQDKIKevprprkrlte 238
Cdd:COG0493  276 -----R-------LG------AESVTIVYRRTREEMPASKEEVEE-----------------ALEEGVE----------- 309

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 239 lllrtatekpgpaeaarqasasrawgLRFFRSPQQVLPSPDGrRAAGVRLAVTRLEGVDEATRAVP---TGDMEDLPCGL 315
Cdd:COG0493  310 --------------------------FLFLVAPVEIIGDENG-RVTGLECVRMELGEPDESGRRRPvpiEGSEFTLPADL 362

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 384381468 316 VLSSIGYKSRPV----DPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVI 367
Cdd:COG0493  363 VILAIGQTPDPSgleeELGLELDKRGTIVVDEETYQTSLPGVFAGGDAVRGPSLVV 418
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
 30-447 5.14e-165

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 473.80  E-value: 5.14e-165
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  30 HHFSTQEKTP-QICVVGSGPAGFYTAQHLLKQHPQAHVDIYEKQPVPFGLVRFGVAPDHPEVKS---------------- 92
Cdd:PLN02852  17 SNSSSSTSEPlHVCVVGSGPAGFYTADKLLKAHDGARVDIIERLPTPFGLVRSGVAPDHPETKNvtnqfsrvatddrvsf 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  93 -------------------------YGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQELEPDL-SCDTAVILGQGN 146
Cdd:PLN02852  97 fgnvtlgrdvslselrdlyhvvvlaYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPDLkSSDTAVVLGQGN 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 147 VALDVARILLTPPEHLERTDITKAALGVLRQSRVKTVWLVGRRGPLQVAFTIKELREMIQLPGARPILDPVDFLGLQDKI 226
Cdd:PLN02852 177 VALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTLSPEDE 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 227 KEV--PRPRKRLTELLLRTATEKPGPAEAARQASAsrawgLRFFRSPQQVLPSPDG-RRAAGVRLAVTRLEGVDEATR-- 301
Cdd:PLN02852 257 EELkaSRPKRRVYELLSKAAAAGKCAPSGGQRELH-----FVFFRNPTRFLDSGDGnGHVAGVKLERTVLEGAAGSGKqv 331

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 302 AVPTGDMEDLPCGLVLSSIGYKSRPVDpSVPFDSKLGVIPNVEGRVM-------DVPGLYCSGWVKRGPTGVIATTMTDS 374
Cdd:PLN02852 332 AVGTGEFEDLPCGLVLKSIGYKSLPVD-GLPFDHKRGVVPNVHGRVLssasgadTEPGLYVVGWLKRGPTGIIGTNLTCA 410

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 384381468 375 FLTGQMLLQDLKAGLLP---SGPRPGYAAIQALLSSRGVRPVSFSDWEKLDAEEVARGQGTGKPREKLVDPQEMLR 447
Cdd:PLN02852 411 EETVASIAEDLEQGRLRgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGRARGKPREKITSIEEMLK 486
PTZ00188 PTZ00188
adrenodoxin reductase; Provisional
 30-449 9.59e-34

adrenodoxin reductase; Provisional


Pssm-ID: 240308  Cd Length: 506  Bit Score: 132.70  E-value: 9.59e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  30 HHFSTQEKTPQICVVGSGPAGFYTAQHLLKqHPQAHVDIYEKQPVPFGLVRFGVAPDHPEVKS----------------- 92
Cdd:PTZ00188  31 CFFTNEAKPFKVGIIGAGPSALYCCKHLLK-HERVKVDIFEKLPNPYGLIRYGVAPDHIHVKNtyktfdpvflspnyrff 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  93 ---------------------------------YGAEDHRALEIPGEELP----GVCSARAFVGWYNGLPEnqelepDLS 135
Cdd:PTZ00188 110 gnvhvgvdlkmeelrnhyncvifccgasevsipIGQQDEDKAVSGGETNPrkqnGIFHARDLIYFYNNMYN------DVR 183

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 136 C-------------DTAVILGQGNVALDVARILLTPPEHLERTDITKAALGVLRQSRVKTVWLVGRRGPLQVAFTIKELR 202
Cdd:PTZ00188 184 CkavdnylnsfenfTTSIIIGNGNVSLDIARILIKSPDDLSKTDISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTNAELR 263

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 203 EMIQLPGARPILDPVDFlGLQDKIK---EVPRPRKRLTELLLRTATEKPGPAEAARQASASRAWGLRFFRSPQQVLPspd 279
Cdd:PTZ00188 264 ELISLENTKVILSKKNY-DLCCHLKsdeENTNMKKRQHEIFQKMVKNYEEVEKNKEFYKTYKIIEFIFYFEIRQIRP--- 339

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 280 grraagvrlavtrlegVDEATRAVPTGDMEDLPcgLVLSSIGYKSRPVDPSVPFDS---KLGVIPNVEGRVMDVP----- 351
Cdd:PTZ00188 340 ----------------IDGAMKNVELELNKNVP--MSFSSFKENKVLVTPLVIFATgfkKSNFAENLYNQSVQMFkedig 401

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 352 ----GLYCSGWVKRGPTGVIATTMTDSFLTGQMLLQDL-KAGLLPSGPrpgyaaIQALLSSRGVRPVSFSDWEKLDAEEV 426
Cdd:PTZ00188 402 qhkfAIFKAGWFDKGPKGNIASQILNSKNSTHLVLNFLqKVDIFFDND------ISSLLKEKQIPYVSFDDWTYLHQLEK 475

                        490       500
                 ....*....|....*....|...
gi 384381468 427 ARGQGTGKPREKLVDPQEMLRLL 449
Cdd:PTZ00188 476 QMGAQQNKIAQKFSQTGEVLRIL 498
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 41-367 1.50e-23

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 102.14  E-value: 1.50e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  41 ICVVGSGPAGFYTAQHLLKQ-HPqahVDIYEKQPVPFGLVRFGVaPDHPEVKSY-------------------------- 93
Cdd:COG0493  124 VAVVGSGPAGLAAAYQLARAgHE---VTVFEALDKPGGLLRYGI-PEFRLPKDVldreieliealgvefrtnvevgkdit 199

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  94 ---------------GAEDHRALEIPGEELPGVCSARAFVGWYNGlpENQELEPDLSCDTAVILGQGNVALDVARILLtp 158
Cdd:COG0493  200 ldelleefdavflatGAGKPRDLGIPGEDLKGVHSAMDFLTAVNL--GEAPDTILAVGKRVVVIGGGNTAMDCARTAL-- 275

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 159 pehleRtditkaaLGvlrqsrVKTVWLVGRRGPLQVAFTIKELREmiqlpgarpildpvdflGLQDKIKevprprkrlte 238
Cdd:COG0493  276 -----R-------LG------AESVTIVYRRTREEMPASKEEVEE-----------------ALEEGVE----------- 309

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 239 lllrtatekpgpaeaarqasasrawgLRFFRSPQQVLPSPDGrRAAGVRLAVTRLEGVDEATRAVP---TGDMEDLPCGL 315
Cdd:COG0493  310 --------------------------FLFLVAPVEIIGDENG-RVTGLECVRMELGEPDESGRRRPvpiEGSEFTLPADL 362

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 384381468 316 VLSSIGYKSRPV----DPSVPFDSKLGVIPNVEGRVMDVPGLYCSGWVKRGPTGVI 367
Cdd:COG0493  363 VILAIGQTPDPSgleeELGLELDKRGTIVVDEETYQTSLPGVFAGGDAVRGPSLVV 418
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 41-153 5.67e-10

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 61.43  E-value: 5.67e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  41 ICVVGSGPAGFYTAQHL-LKQHpqaHVDIYEKQPVPFGLVRFG------------------------------VAPDHPE 89
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLrRMGH---AVTIFEAGPKLGGMMRYGipayrlprevldaeiqrildlgvevrlgvrVGEDITL 216

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 384381468  90 V---KSY-------GAEDHRALEIPGEELPGVCSARAFVGWYNglpenqELEPDLSCDTAVILGQGNVALDVAR 153
Cdd:PRK12771 217 EqleGEFdavfvaiGAQLGKRLPIPGEDAAGVLDAVDFLRAVG------EGEPPFLGKRVVVIGGGNTAMDAAR 284
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 30-153 6.65e-07

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 51.33  E-value: 6.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  30 HHFSTQEKTPQ-ICVVGSGPAGFyTAQHLLKQHpqAH-VDIYEKQPVPFGLVRFGVA----PDH---PEV---KSYGAED 97
Cdd:PRK11749 131 VLFKRAPKTGKkVAVIGAGPAGL-TAAHRLARK--GYdVTIFEARDKAGGLLRYGIPefrlPKDivdREVerlLKLGVEI 207

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  98 H------------------------------RALEIPGEELPGVCSARAFvgwyngLPE-NQ--ELEPDLSCDTAVILGQ 144
Cdd:PRK11749 208 RtntevgrditldelragydavfigtgaglpRFLGIPGENLGGVYSAVDF------LTRvNQavADYDLPVGKRVVVIGG 281


                 ....*....
gi 384381468 145 GNVALDVAR 153
Cdd:PRK11749 282 GNTAMDAAR 290
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
 41-238 1.44e-06

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 49.99  E-value: 1.44e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  41 ICVVGSGPAGFYTAQHLL-KQHpqaHVDIYEKQPVPFGLVRFGV---------------------------------APD 86
Cdd:PRK12770  21 VAIIGAGPAGLAAAGYLAcLGY---EVHVYDKLPEPGGLMLFGIpefripiervregvkeleeagvvfhtrtkvccgEPL 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  87 HPE---------------VKSY-------GAEDHRALEIPGEELPGVCSARAFVGW-----YNGLPenQELEPDLSCDTA 139
Cdd:PRK12770  98 HEEegdefverivsleelVKKYdavliatGTWKSRKLGIPGEDLPGVYSALEYLFRiraakLGYLP--WEKVPPVEGKKV 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468 140 VILGQGNVALDVArilltppehlertdITKAALGvlrqsrVKTVWLVGRRgPLQVA----FTIKELREMiqlpGA--RPI 213
Cdd:PRK12770 176 VVVGAGLTAVDAA--------------LEAVLLG------AEKVYLAYRR-TINEApagkYEIERLIAR----GVefLEL 230

                        250       260
                 ....*....|....*....|....*
gi 384381468 214 LDPVDFLGlQDKIKEVPRPRKRLTE 238
Cdd:PRK12770 231 VTPVRIIG-EGRVEGVELAKMRLGE 254
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 43-111 1.24e-04

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 44.38  E-value: 1.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  43 VVGSGPAGFYTAQHLLKQHPQAHVdiYEKQPVPFGLVRFGVaPD----------------------HPEV---------- 90
Cdd:PRK12810 148 VVGSGPAGLAAADQLARAGHKVTV--FERADRIGGLLRYGI-PDfklekevidrrielmeaegiefRTNVevgkditaee 224

                         90       100       110
                 ....*....|....*....|....*....|
gi 384381468  91 --KSY-------GAEDHRALEIPGEELPGV 111
Cdd:PRK12810 225 llAEYdavflgtGAYKPRDLGIPGRDLDGV 254
PRK12775 PRK12775
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ...
 20-367 1.80e-04

putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional


Pssm-ID: 183738 [Multi-domain]  Cd Length: 1006  Bit Score: 44.16  E-value: 1.80e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468   20 PPAGSTPSFchhfstQEKTPQICVVGSGPAGFYTAQHLLKQHpqAHVDIYEKQPVPFGLVRFGVAP--------DHpEVK 91
Cdd:PRK12775  418 AKPVKPPRF------SKKLGKVAICGSGPAGLAAAADLVKYG--VDVTVYEALHVVGGVLQYGIPSfrlprdiiDR-EVQ 488

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468   92 -----------------------------------SYGAEDHRALEIPGEELPGVCSARAFVGWYNGLPENQ--ELEPDL 134
Cdd:PRK12775  489 rlvdigvkietnkvigktftvpqlmndkgfdavflGVGAGAPTFLGIPGEFAGQVYSANEFLTRVNLMGGDKfpFLDTPI 568

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  135 SCDTAVI-LGQGNVALDVARilltppehlertditkaalgVLRQSRVKTVWLVGRRGPLQVAFTIKELREMIQlpgarpi 213
Cdd:PRK12775  569 SLGKSVVvIGAGNTAMDCLR--------------------VAKRLGAPTVRCVYRRSEAEAPARIEEIRHAKE------- 621

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  214 lDPVDFLglqdkikevprprkrltelllrtatekpgpaeaarqasasrawglrFFRSPQQVLPSPDGRrAAGVRLAVTRL 293
Cdd:PRK12775  622 -EGIDFF----------------------------------------------FLHSPVEIYVDAEGS-VRGMKVEEMEL 653

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  294 EGVDEATR--AVPTGDMEDLPCGLVLSSIGYKSRPV----DPSVPFDsKLGVIPNVEGRVMD-----VPGLYCSGWVKRG 362
Cdd:PRK12775  654 GEPDEKGRrkPMPTGEFKDLECDTVIYALGTKANPIitqsTPGLALN-KWGNIAADDGKLEStqstnLPGVFAGGDIVTG 732


                  ....*
gi 384381468  363 PTGVI 367
Cdd:PRK12775  733 GATVI 737
PRK13984 PRK13984
putative oxidoreductase; Provisional
 32-153 2.56e-04

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 43.22  E-value: 2.56e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  32 FSTQEKTPQICVVGSGPAGFYTAQHLLKQHPQahVDIYEKQPVPFGLVRFGVA----PDHPE------VKSYGAEDH--- 98
Cdd:PRK13984 277 DEPEKKNKKVAIVGSGPAGLSAAYFLATMGYE--VTVYESLSKPGGVMRYGIPsyrlPDEALdkdiafIEALGVKIHlnt 354

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 384381468  99 ---------------------------RALEIPGEELPGVCSArafvgwyngLPENQELEPDLSCD--------TAVILG 143
Cdd:PRK13984 355 rvgkdipleelrekhdavflstgftlgRSTRIPGTDHPDVIQA---------LPLLREIRDYLRGEgpkpkiprSLVVIG 425

                        170
                 ....*....|
gi 384381468 144 QGNVALDVAR 153
Cdd:PRK13984 426 GGNVAMDIAR 435
PRK09897 PRK09897
FAD-NAD(P)-binding protein;
40-71 3.55e-03

FAD-NAD(P)-binding protein;


Pssm-ID: 182134 [Multi-domain]  Cd Length: 534  Bit Score: 39.72  E-value: 3.55e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 384381468  40 QICVVGSGPAGFYTAQHLLKQHPQAHVDIYEK 71
Cdd:PRK09897   3 KIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQ 34
PRK07233 PRK07233
hypothetical protein; Provisional
 41-78 4.34e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 39.10  E-value: 4.34e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 384381468  41 ICVVGSGPAGFYTAQHLLKQHPQahVDIYEKQPVPFGL 78
Cdd:PRK07233   2 IAIVGGGIAGLAAAYRLAKRGHE--VTVFEADDQLGGL 37
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
35-75 5.60e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 39.17  E-value: 5.60e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 384381468  35 QEKTPQICVVGSGPAGFYTAQHLLKQHPQA-HVDIYEKQPVP 75
Cdd:COG4529    2 TGARKRIAIIGGGASGTALAIHLLRRAPEPlRITLFEPRPEL 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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