vacuolar protein sorting-associated protein 72 homolog isoform 1 [Homo sapiens]
Vps72/YL1 family protein( domain architecture ID 12065826)
Vps72/YL1 family protein similar to human Vps72 (vacuolar protein sorting-associated protein 72) homolog, which is a component of the SRCAP complex and mediates the ATP-dependent exchange of histone H2AZ1/H2B dimers for nucleosomal H2A/H2B, leading to transcriptional regulation of selected genes by chromatin remodeling; contains YL1 C-terminal domain which is found in proteins that are not YL1 protein
List of domain hits
Name | Accession | Description | Interval | E-value | |||||
YL1 | pfam05764 | YL1 nuclear protein; The proteins in this family are designated YL1. These proteins have been ... |
7-216 | 1.96e-40 | |||||
YL1 nuclear protein; The proteins in this family are designated YL1. These proteins have been shown to be DNA-binding and may be a transcription factor. : Pssm-ID: 461734 [Multi-domain] Cd Length: 245 Bit Score: 142.94 E-value: 1.96e-40
|
|||||||||
YL1_C | pfam08265 | YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. ... |
302-330 | 7.46e-10 | |||||
YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. These proteins have been shown to be DNA-binding and may be a transcription factor. This domain is found in proteins that are not YL1 proteins. : Pssm-ID: 462412 Cd Length: 29 Bit Score: 53.52 E-value: 7.46e-10
|
|||||||||
Name | Accession | Description | Interval | E-value | |||||
YL1 | pfam05764 | YL1 nuclear protein; The proteins in this family are designated YL1. These proteins have been ... |
7-216 | 1.96e-40 | |||||
YL1 nuclear protein; The proteins in this family are designated YL1. These proteins have been shown to be DNA-binding and may be a transcription factor. Pssm-ID: 461734 [Multi-domain] Cd Length: 245 Bit Score: 142.94 E-value: 1.96e-40
|
|||||||||
YL1_C | pfam08265 | YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. ... |
302-330 | 7.46e-10 | |||||
YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. These proteins have been shown to be DNA-binding and may be a transcription factor. This domain is found in proteins that are not YL1 proteins. Pssm-ID: 462412 Cd Length: 29 Bit Score: 53.52 E-value: 7.46e-10
|
|||||||||
YL1_C | smart00993 | YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. ... |
301-330 | 9.52e-09 | |||||
YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. These proteins have been shown to be DNA-binding and may be a transcription factor. This domain is found in proteins that are not YL1 proteins. Pssm-ID: 198061 [Multi-domain] Cd Length: 30 Bit Score: 50.59 E-value: 9.52e-09
|
|||||||||
Name | Accession | Description | Interval | E-value | |||||
YL1 | pfam05764 | YL1 nuclear protein; The proteins in this family are designated YL1. These proteins have been ... |
7-216 | 1.96e-40 | |||||
YL1 nuclear protein; The proteins in this family are designated YL1. These proteins have been shown to be DNA-binding and may be a transcription factor. Pssm-ID: 461734 [Multi-domain] Cd Length: 245 Bit Score: 142.94 E-value: 1.96e-40
|
|||||||||
YL1_C | pfam08265 | YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. ... |
302-330 | 7.46e-10 | |||||
YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. These proteins have been shown to be DNA-binding and may be a transcription factor. This domain is found in proteins that are not YL1 proteins. Pssm-ID: 462412 Cd Length: 29 Bit Score: 53.52 E-value: 7.46e-10
|
|||||||||
YL1_C | smart00993 | YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. ... |
301-330 | 9.52e-09 | |||||
YL1 nuclear protein C-terminal domain; This domain is found in proteins of the YL1 family. These proteins have been shown to be DNA-binding and may be a transcription factor. This domain is found in proteins that are not YL1 proteins. Pssm-ID: 198061 [Multi-domain] Cd Length: 30 Bit Score: 50.59 E-value: 9.52e-09
|
|||||||||
DNA_pol_phi | pfam04931 | DNA polymerase phi; This family includes the fifth essential DNA polymerase in yeast EC:2.7.7. ... |
18-88 | 4.34e-03 | |||||
DNA polymerase phi; This family includes the fifth essential DNA polymerase in yeast EC:2.7.7.7. Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units. Pssm-ID: 461488 Cd Length: 765 Bit Score: 39.14 E-value: 4.34e-03
|
|||||||||
Blast search parameters | ||||
|