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Conserved domains on  [gi|524557857|ref|NP_001265857|]
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surfeit locus protein 2 isoform 2 [Homo sapiens]

Protein Classification

SURF2 domain-containing protein( domain architecture ID 10527237)

SURF2 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SURF2 pfam05477
Surfeit locus protein 2 (SURF2); Surfeit locus protein 2 is part of a group of at least six ...
5-244 4.51e-131

Surfeit locus protein 2 (SURF2); Surfeit locus protein 2 is part of a group of at least six sequence unrelated genes (Surf-1 to Surf-6). The six Surfeit genes have been classified as housekeeping genes, being expressed in all tissue types tested and not containing a TATA box in their promoter region. The exact function of SURF2 is unknown.


:

Pssm-ID: 461659  Cd Length: 240  Bit Score: 370.17  E-value: 4.51e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857    5 PGDVRAFLREHPSLRLqTDARKVRCILTGHELPCRLPELQVYTRGKKYQRLvRASPAFDYAEFEPHIVPSTKNPHQLFCK 84
Cdd:pfam05477   1 PADVRAFLLQHPFLQL-LENGKVKCVLTGHELPCRLPELQSYTRGKKYRRL-RALADFDYSQYEPHIVPSTKQPHQLFCK 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857   85 LTLRHINKCPEHVLRHTQGRRYQRALCKYEECQKQGVEYVPACLVHRRRRREDQMDGDG-PRPREAFWEPTSSDEGGAAS 163
Cdd:pfam05477  79 LTLRHINKSPEHVLRHVQGKRYKRALEKYEECQKQGVEYVPACLLHKKPKKTDQKDGRRkSKQKEGFWEPSSSDEEASDS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857  164 DDSMTDLYPPELFTRKDLGSTEDGDGT-DDFLTDKEDEKAKPPREKATdEGRRETTVYRGLVQKRGK-QLGSLKKKFKSH 241
Cdd:pfam05477 159 DDSMSDLYPPELFTLKPPGERWDNDDGgSDFETDEEEEEAIGSDGKGE-DGKEEMEVDTSKRQKRKKkQSGSSSKKFRSH 237

                  ...
gi 524557857  242 HRK 244
Cdd:pfam05477 238 HKK 240
 
Name Accession Description Interval E-value
SURF2 pfam05477
Surfeit locus protein 2 (SURF2); Surfeit locus protein 2 is part of a group of at least six ...
5-244 4.51e-131

Surfeit locus protein 2 (SURF2); Surfeit locus protein 2 is part of a group of at least six sequence unrelated genes (Surf-1 to Surf-6). The six Surfeit genes have been classified as housekeeping genes, being expressed in all tissue types tested and not containing a TATA box in their promoter region. The exact function of SURF2 is unknown.


Pssm-ID: 461659  Cd Length: 240  Bit Score: 370.17  E-value: 4.51e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857    5 PGDVRAFLREHPSLRLqTDARKVRCILTGHELPCRLPELQVYTRGKKYQRLvRASPAFDYAEFEPHIVPSTKNPHQLFCK 84
Cdd:pfam05477   1 PADVRAFLLQHPFLQL-LENGKVKCVLTGHELPCRLPELQSYTRGKKYRRL-RALADFDYSQYEPHIVPSTKQPHQLFCK 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857   85 LTLRHINKCPEHVLRHTQGRRYQRALCKYEECQKQGVEYVPACLVHRRRRREDQMDGDG-PRPREAFWEPTSSDEGGAAS 163
Cdd:pfam05477  79 LTLRHINKSPEHVLRHVQGKRYKRALEKYEECQKQGVEYVPACLLHKKPKKTDQKDGRRkSKQKEGFWEPSSSDEEASDS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857  164 DDSMTDLYPPELFTRKDLGSTEDGDGT-DDFLTDKEDEKAKPPREKATdEGRRETTVYRGLVQKRGK-QLGSLKKKFKSH 241
Cdd:pfam05477 159 DDSMSDLYPPELFTLKPPGERWDNDDGgSDFETDEEEEEAIGSDGKGE-DGKEEMEVDTSKRQKRKKkQSGSSSKKFRSH 237

                  ...
gi 524557857  242 HRK 244
Cdd:pfam05477 238 HKK 240
 
Name Accession Description Interval E-value
SURF2 pfam05477
Surfeit locus protein 2 (SURF2); Surfeit locus protein 2 is part of a group of at least six ...
5-244 4.51e-131

Surfeit locus protein 2 (SURF2); Surfeit locus protein 2 is part of a group of at least six sequence unrelated genes (Surf-1 to Surf-6). The six Surfeit genes have been classified as housekeeping genes, being expressed in all tissue types tested and not containing a TATA box in their promoter region. The exact function of SURF2 is unknown.


Pssm-ID: 461659  Cd Length: 240  Bit Score: 370.17  E-value: 4.51e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857    5 PGDVRAFLREHPSLRLqTDARKVRCILTGHELPCRLPELQVYTRGKKYQRLvRASPAFDYAEFEPHIVPSTKNPHQLFCK 84
Cdd:pfam05477   1 PADVRAFLLQHPFLQL-LENGKVKCVLTGHELPCRLPELQSYTRGKKYRRL-RALADFDYSQYEPHIVPSTKQPHQLFCK 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857   85 LTLRHINKCPEHVLRHTQGRRYQRALCKYEECQKQGVEYVPACLVHRRRRREDQMDGDG-PRPREAFWEPTSSDEGGAAS 163
Cdd:pfam05477  79 LTLRHINKSPEHVLRHVQGKRYKRALEKYEECQKQGVEYVPACLLHKKPKKTDQKDGRRkSKQKEGFWEPSSSDEEASDS 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 524557857  164 DDSMTDLYPPELFTRKDLGSTEDGDGT-DDFLTDKEDEKAKPPREKATdEGRRETTVYRGLVQKRGK-QLGSLKKKFKSH 241
Cdd:pfam05477 159 DDSMSDLYPPELFTLKPPGERWDNDDGgSDFETDEEEEEAIGSDGKGE-DGKEEMEVDTSKRQKRKKkQSGSSSKKFRSH 237

                  ...
gi 524557857  242 HRK 244
Cdd:pfam05477 238 HKK 240
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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