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Conserved domains on  [gi|543173101|ref|NP_001269473|]
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coiled-coil domain-containing protein 182 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4715 super family cl24414
Domain of unknown function (DUF4715); This family of proteins is found in eukaryotes. Proteins ...
1-139 2.37e-95

Domain of unknown function (DUF4715); This family of proteins is found in eukaryotes. Proteins in this family are approximately 150 amino acids in length. The proteins are described as coiled-coil domain-containing protein ENSP00000299415-like.


The actual alignment was detected with superfamily member pfam15835:

Pssm-ID: 374157  Cd Length: 139  Bit Score: 271.52  E-value: 2.37e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543173101    1 MEPLYQAGSILMTVNTLQGKKMIESGLQSGDFSLSQSWPSCLPPPADLEILQQKVAGVQRELEDFKKEALKSIHYLEDAF 80
Cdd:pfam15835   1 MDPFYQAGPILMKVNTLQGKKMVESGLQSGDFSLPESLPPCLPPPADLEILLQKVAGVQRDLEDFKKEALKAIHRLEDAF 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 543173101   81 CEMNGALVQQEEQAARVRQRLREEEDRGIVRNKVLTFLLPREKQLREHCKRLEDLLLDR 139
Cdd:pfam15835  81 CEMNGALAEQEEQAARVKQRLREEEDRGIVRNKVLTFLLPREKQLREHCKRLEDLFLDR 139
 
Name Accession Description Interval E-value
DUF4715 pfam15835
Domain of unknown function (DUF4715); This family of proteins is found in eukaryotes. Proteins ...
1-139 2.37e-95

Domain of unknown function (DUF4715); This family of proteins is found in eukaryotes. Proteins in this family are approximately 150 amino acids in length. The proteins are described as coiled-coil domain-containing protein ENSP00000299415-like.


Pssm-ID: 374157  Cd Length: 139  Bit Score: 271.52  E-value: 2.37e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543173101    1 MEPLYQAGSILMTVNTLQGKKMIESGLQSGDFSLSQSWPSCLPPPADLEILQQKVAGVQRELEDFKKEALKSIHYLEDAF 80
Cdd:pfam15835   1 MDPFYQAGPILMKVNTLQGKKMVESGLQSGDFSLPESLPPCLPPPADLEILLQKVAGVQRDLEDFKKEALKAIHRLEDAF 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 543173101   81 CEMNGALVQQEEQAARVRQRLREEEDRGIVRNKVLTFLLPREKQLREHCKRLEDLLLDR 139
Cdd:pfam15835  81 CEMNGALAEQEEQAARVKQRLREEEDRGIVRNKVLTFLLPREKQLREHCKRLEDLFLDR 139
 
Name Accession Description Interval E-value
DUF4715 pfam15835
Domain of unknown function (DUF4715); This family of proteins is found in eukaryotes. Proteins ...
1-139 2.37e-95

Domain of unknown function (DUF4715); This family of proteins is found in eukaryotes. Proteins in this family are approximately 150 amino acids in length. The proteins are described as coiled-coil domain-containing protein ENSP00000299415-like.


Pssm-ID: 374157  Cd Length: 139  Bit Score: 271.52  E-value: 2.37e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 543173101    1 MEPLYQAGSILMTVNTLQGKKMIESGLQSGDFSLSQSWPSCLPPPADLEILQQKVAGVQRELEDFKKEALKSIHYLEDAF 80
Cdd:pfam15835   1 MDPFYQAGPILMKVNTLQGKKMVESGLQSGDFSLPESLPPCLPPPADLEILLQKVAGVQRDLEDFKKEALKAIHRLEDAF 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 543173101   81 CEMNGALVQQEEQAARVRQRLREEEDRGIVRNKVLTFLLPREKQLREHCKRLEDLLLDR 139
Cdd:pfam15835  81 CEMNGALAEQEEQAARVKQRLREEEDRGIVRNKVLTFLLPREKQLREHCKRLEDLFLDR 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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