|
Name |
Accession |
Description |
Interval |
E-value |
| PRK05096 |
PRK05096 |
guanosine 5'-monophosphate oxidoreductase; Provisional |
21-424 |
0e+00 |
|
guanosine 5'-monophosphate oxidoreductase; Provisional
Pssm-ID: 235343 [Multi-domain] Cd Length: 346 Bit Score: 666.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 21 HIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSL 100
Cdd:PRK05096 2 RIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSWSGVPIIAANMDTVGTFEMAKALASFDILTAVHKHYSV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 101 VQWQEF-AGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVT 179
Cdd:PRK05096 82 EEWAAFvNNSSADVLKHVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVT 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 180 GEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVML 259
Cdd:PRK05096 162 GEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVML 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 260 GGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYryvwrprslvivwrqnswllrggwyssqrsmvnrgs 339
Cdd:PRK05096 242 GGMLAGHEESGGEIVEENGEKFMLFYGMSSESAMKRHVGGVAEY------------------------------------ 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 340 mlgsvekslglrnpegednkvfptlRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQV 419
Cdd:PRK05096 286 -------------------------RAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQE 340
|
....*
gi 545687487 420 NPIFS 424
Cdd:PRK05096 341 NRVFN 345
|
|
| GMP_reduct_1 |
TIGR01305 |
guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP ... |
22-423 |
0e+00 |
|
guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]
Pssm-ID: 130372 Cd Length: 343 Bit Score: 616.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 22 IDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLV 101
Cdd:TIGR01305 2 IEADLKLDFKDVLLRPKRSTLKSRADVELERTFTFRNSKQTYSGVPIIAANMDTVGTFEMAAALSQHSIFTAIHKHYSVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 102 QWQEFA-GQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTG 180
Cdd:TIGR01305 82 EWKAFAtNSSPDCLQNVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 181 EMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLG 260
Cdd:TIGR01305 162 EMVEELILSGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 261 GMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYryvwrprslvivwrqnswllrggwyssqrsmvnrgsm 340
Cdd:TIGR01305 242 GMFAGHTESGGEVIERNGRKFKLFYGMSSDTAMKKHAGGVAEY------------------------------------- 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 341 lgsvekslglrnpegednkvfptlRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVN 420
Cdd:TIGR01305 285 ------------------------RASEGKTVEVPYRGDVENTILDILGGLRSACTYVGAAKLKELSKRATFIRVTQQHN 340
|
...
gi 545687487 421 PIF 423
Cdd:TIGR01305 341 TVF 343
|
|
| IMPDH |
cd00381 |
IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the ... |
28-415 |
4.93e-131 |
|
IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Pssm-ID: 238223 [Multi-domain] Cd Length: 325 Bit Score: 380.32 E-value: 4.93e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 28 LDFKDVLLRPKRSTLkSRSEVDLTRSFSfrnsKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSlvqWQEFA 107
Cdd:cd00381 2 LTFDDVLLVPGYSTV-LPSEVDLSTKLT----KNITLNIPLVSAPMDTVTESEMAIAMARLGGIGVIHRNMS---IEEQA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 108 GQNPDCLEHL--AASSGTGSSDFEQLEQILEAIpqVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEE 185
Cdd:cd00381 74 EEVRKVKGRLlvGAAVGTREDDKERAEALVEAG--VDVIVIDSAHGHSVYVIEMIKFIKKKYPNVDVIAGNVVTAEAARD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 186 LILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAG 265
Cdd:cd00381 152 LIDAGADGVKVGIGPGSICTTRIVTGVGVPQATAVADVAAAARDYGVPVIADGGIRTSGDIVKALAAGADAVMLGSLLAG 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 266 HSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGvaeyryvwrprslvivwrqnswllrggwyssqrsmvnrgsmlgsve 345
Cdd:cd00381 232 TDESPGEYIEINGKRYKEYRGMGSLGAMKKGGGD---------------------------------------------- 265
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 346 kslglRNPEGEDNKVFPtlrasEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRV 415
Cdd:cd00381 266 -----RYFGEEAKKLVP-----EGVEGIVPYKGSVKDVLPQLVGGLRSSMGYCGAKSLKELQEKARFVRI 325
|
|
| GuaB |
COG0516 |
IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]; IMP dehydrogenase/GMP ... |
33-416 |
6.60e-84 |
|
IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]; IMP dehydrogenase/GMP reductase is part of the Pathway/BioSystem: Purine biosynthesis
Pssm-ID: 440282 [Multi-domain] Cd Length: 326 Bit Score: 260.14 E-value: 6.60e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 33 VLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQ-EFAGQNP 111
Cdd:COG0516 1 LVLDALRRRLISRSGVVVVVVVGKLTIITTRRRRRDEAVKALVVTTVIEKLLLVTVAGETALLALALLLLKKkKFLLLVD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 112 DCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHfvEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGA 191
Cdd:COG0516 81 DDGLLLLVLVGVKDDDKEKARALAAADAGVDVLVIDAAHGHSGG--DAMKKIKLTFDDVLLIPGNSATVEPARALVDAGA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 192 DIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKgHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGG 271
Cdd:COG0516 159 DLTKVGIGPGSICTTRVVIGLGIPQLSAAMDTVTEARMAI-AIAADGGIGYIHDNAKALAAGADAVMLGSLFAGTEEQPG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 272 ELIERDGKKYKLFYGMSSemamkkyaggvaeyryvwrprslvivwrqnswllrggwyssqrsmvnrgsmlgsvekslglr 351
Cdd:COG0516 238 EVILYQGRSVKRYRGMGS-------------------------------------------------------------- 255
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 545687487 352 npegEDNKVFPtlrasEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVT 416
Cdd:COG0516 256 ----DAKKLVP-----EGIEGRVPYKGPLEDTLHQLLGGLRSGMGYCGARTIEELREKARFVRIT 311
|
|
| IMPDH |
pfam00478 |
IMP dehydrogenase / GMP reductase domain; This family is involved in biosynthesis of guanosine ... |
118-417 |
7.86e-79 |
|
IMP dehydrogenase / GMP reductase domain; This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.
Pssm-ID: 459826 [Multi-domain] Cd Length: 463 Bit Score: 251.15 E-value: 7.86e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 118 AASSGTGSSDFEQLEQILEAipQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 197
Cdd:pfam00478 212 GAAVGVGDDTLERAEALVEA--GVDVLVVDTAHGHSKGVIDTVKWIKKKYPDVQVIAGNVATAEGAKALIEAGADAVKVG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 198 IGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERD 277
Cdd:pfam00478 290 IGPGSICTTRVVAGVGVPQLTAIYDVAEAAKKYGVPVIADGGIKYSGDIVKALAAGADAVMLGSLLAGTDESPGEVILYQ 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 278 GKKYKLFYGMSSEMAMKKyagGVAEyRYvwrprslvivwrqnswllrggwysSQrsmvnrgsmlgsvekslglrnpEGED 357
Cdd:pfam00478 370 GRRYKSYRGMGSLGAMKK---GSKD-RY------------------------FQ----------------------EDDD 399
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 545687487 358 NKVFPtlrasEGktVE--VPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQ 417
Cdd:pfam00478 400 KKLVP-----EG--VEgrVPYKGPLSDVVYQLVGGLRSGMGYCGAKTIEELREKARFVRITA 454
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK05096 |
PRK05096 |
guanosine 5'-monophosphate oxidoreductase; Provisional |
21-424 |
0e+00 |
|
guanosine 5'-monophosphate oxidoreductase; Provisional
Pssm-ID: 235343 [Multi-domain] Cd Length: 346 Bit Score: 666.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 21 HIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSL 100
Cdd:PRK05096 2 RIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSWSGVPIIAANMDTVGTFEMAKALASFDILTAVHKHYSV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 101 VQWQEF-AGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVT 179
Cdd:PRK05096 82 EEWAAFvNNSSADVLKHVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVT 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 180 GEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVML 259
Cdd:PRK05096 162 GEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVML 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 260 GGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYryvwrprslvivwrqnswllrggwyssqrsmvnrgs 339
Cdd:PRK05096 242 GGMLAGHEESGGEIVEENGEKFMLFYGMSSESAMKRHVGGVAEY------------------------------------ 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 340 mlgsvekslglrnpegednkvfptlRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQV 419
Cdd:PRK05096 286 -------------------------RAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQE 340
|
....*
gi 545687487 420 NPIFS 424
Cdd:PRK05096 341 NRVFN 345
|
|
| GMP_reduct_1 |
TIGR01305 |
guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP ... |
22-423 |
0e+00 |
|
guanosine monophosphate reductase, eukaryotic; A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]
Pssm-ID: 130372 Cd Length: 343 Bit Score: 616.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 22 IDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLV 101
Cdd:TIGR01305 2 IEADLKLDFKDVLLRPKRSTLKSRADVELERTFTFRNSKQTYSGVPIIAANMDTVGTFEMAAALSQHSIFTAIHKHYSVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 102 QWQEFA-GQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTG 180
Cdd:TIGR01305 82 EWKAFAtNSSPDCLQNVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 181 EMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLG 260
Cdd:TIGR01305 162 EMVEELILSGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 261 GMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYryvwrprslvivwrqnswllrggwyssqrsmvnrgsm 340
Cdd:TIGR01305 242 GMFAGHTESGGEVIERNGRKFKLFYGMSSDTAMKKHAGGVAEY------------------------------------- 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 341 lgsvekslglrnpegednkvfptlRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVN 420
Cdd:TIGR01305 285 ------------------------RASEGKTVEVPYRGDVENTILDILGGLRSACTYVGAAKLKELSKRATFIRVTQQHN 340
|
...
gi 545687487 421 PIF 423
Cdd:TIGR01305 341 TVF 343
|
|
| IMPDH |
cd00381 |
IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the ... |
28-415 |
4.93e-131 |
|
IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Pssm-ID: 238223 [Multi-domain] Cd Length: 325 Bit Score: 380.32 E-value: 4.93e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 28 LDFKDVLLRPKRSTLkSRSEVDLTRSFSfrnsKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSlvqWQEFA 107
Cdd:cd00381 2 LTFDDVLLVPGYSTV-LPSEVDLSTKLT----KNITLNIPLVSAPMDTVTESEMAIAMARLGGIGVIHRNMS---IEEQA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 108 GQNPDCLEHL--AASSGTGSSDFEQLEQILEAIpqVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEE 185
Cdd:cd00381 74 EEVRKVKGRLlvGAAVGTREDDKERAEALVEAG--VDVIVIDSAHGHSVYVIEMIKFIKKKYPNVDVIAGNVVTAEAARD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 186 LILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAG 265
Cdd:cd00381 152 LIDAGADGVKVGIGPGSICTTRIVTGVGVPQATAVADVAAAARDYGVPVIADGGIRTSGDIVKALAAGADAVMLGSLLAG 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 266 HSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGvaeyryvwrprslvivwrqnswllrggwyssqrsmvnrgsmlgsve 345
Cdd:cd00381 232 TDESPGEYIEINGKRYKEYRGMGSLGAMKKGGGD---------------------------------------------- 265
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 346 kslglRNPEGEDNKVFPtlrasEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRV 415
Cdd:cd00381 266 -----RYFGEEAKKLVP-----EGVEGIVPYKGSVKDVLPQLVGGLRSSMGYCGAKSLKELQEKARFVRI 325
|
|
| GuaB |
COG0516 |
IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]; IMP dehydrogenase/GMP ... |
33-416 |
6.60e-84 |
|
IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]; IMP dehydrogenase/GMP reductase is part of the Pathway/BioSystem: Purine biosynthesis
Pssm-ID: 440282 [Multi-domain] Cd Length: 326 Bit Score: 260.14 E-value: 6.60e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 33 VLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQ-EFAGQNP 111
Cdd:COG0516 1 LVLDALRRRLISRSGVVVVVVVGKLTIITTRRRRRDEAVKALVVTTVIEKLLLVTVAGETALLALALLLLKKkKFLLLVD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 112 DCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHfvEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGA 191
Cdd:COG0516 81 DDGLLLLVLVGVKDDDKEKARALAAADAGVDVLVIDAAHGHSGG--DAMKKIKLTFDDVLLIPGNSATVEPARALVDAGA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 192 DIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKgHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGG 271
Cdd:COG0516 159 DLTKVGIGPGSICTTRVVIGLGIPQLSAAMDTVTEARMAI-AIAADGGIGYIHDNAKALAAGADAVMLGSLFAGTEEQPG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 272 ELIERDGKKYKLFYGMSSemamkkyaggvaeyryvwrprslvivwrqnswllrggwyssqrsmvnrgsmlgsvekslglr 351
Cdd:COG0516 238 EVILYQGRSVKRYRGMGS-------------------------------------------------------------- 255
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 545687487 352 npegEDNKVFPtlrasEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVT 416
Cdd:COG0516 256 ----DAKKLVP-----EGIEGRVPYKGPLEDTLHQLLGGLRSGMGYCGARTIEELREKARFVRIT 311
|
|
| IMPDH |
pfam00478 |
IMP dehydrogenase / GMP reductase domain; This family is involved in biosynthesis of guanosine ... |
118-417 |
7.86e-79 |
|
IMP dehydrogenase / GMP reductase domain; This family is involved in biosynthesis of guanosine nucleotide. Members of this family contain a TIM barrel structure. In the inosine monophosphate dehydrogenases 2 CBS domains pfam00571 are inserted in the TIM barrel. This family is a member of the common phosphate binding site TIM barrel family.
Pssm-ID: 459826 [Multi-domain] Cd Length: 463 Bit Score: 251.15 E-value: 7.86e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 118 AASSGTGSSDFEQLEQILEAipQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 197
Cdd:pfam00478 212 GAAVGVGDDTLERAEALVEA--GVDVLVVDTAHGHSKGVIDTVKWIKKKYPDVQVIAGNVATAEGAKALIEAGADAVKVG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 198 IGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERD 277
Cdd:pfam00478 290 IGPGSICTTRVVAGVGVPQLTAIYDVAEAAKKYGVPVIADGGIKYSGDIVKALAAGADAVMLGSLLAGTDESPGEVILYQ 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 278 GKKYKLFYGMSSEMAMKKyagGVAEyRYvwrprslvivwrqnswllrggwysSQrsmvnrgsmlgsvekslglrnpEGED 357
Cdd:pfam00478 370 GRRYKSYRGMGSLGAMKK---GSKD-RY------------------------FQ----------------------EDDD 399
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 545687487 358 NKVFPtlrasEGktVE--VPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQ 417
Cdd:pfam00478 400 KKLVP-----EG--VEgrVPYKGPLSDVVYQLVGGLRSGMGYCGAKTIEELREKARFVRITA 454
|
|
| IMP_dehydrog |
TIGR01302 |
inosine-5'-monophosphate dehydrogenase; This model describes IMP dehydrogenase, an enzyme of ... |
118-406 |
3.27e-59 |
|
inosine-5'-monophosphate dehydrogenase; This model describes IMP dehydrogenase, an enzyme of GMP biosynthesis. This form contains two CBS domains. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]
Pssm-ID: 273546 [Multi-domain] Cd Length: 450 Bit Score: 199.88 E-value: 3.27e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 118 AASSGTGSSDFEQLEQILEAipQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 197
Cdd:TIGR01302 216 GAAVGTREFDKERAEALVKA--GVDVIVIDSSHGHSIYVIDSIKEIKKTYPDLDIIAGNVATAEQAKALIDAGADGLRVG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 198 IGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERD 277
Cdd:TIGR01302 294 IGPGSICTTRIVAGVGVPQITAVYDVAEYAAQSGIPVIADGGIRYSGDIVKALAAGADAVMLGSLLAGTTESPGEYEIIN 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 278 GKKYKLFYGMSSEMAMKKyaggvaeyryvwrprslvivwrqnswllrggwyssqrsmvnrgsmlGSVEKSLGlrnpEGED 357
Cdd:TIGR01302 374 GRRYKQYRGMGSLGAMTK----------------------------------------------GSSDRYLQ----DENK 403
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 545687487 358 NKVFptlrASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKEL 406
Cdd:TIGR01302 404 TKKF----VPEGVEGAVPYKGSVLELLPQLVGGLKSGMGYVGARSIDEL 448
|
|
| PRK05458 |
PRK05458 |
guanosine 5'-monophosphate oxidoreductase; Provisional |
28-306 |
8.98e-56 |
|
guanosine 5'-monophosphate oxidoreductase; Provisional
Pssm-ID: 235479 [Multi-domain] Cd Length: 326 Bit Score: 187.08 E-value: 8.98e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 28 LDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKqtysgVPIIAANMDTVGTFEMAKVLCKFSLFTAVH-----KHYSLVQ 102
Cdd:PRK05458 5 FDYEDIQLIPNKCIVNSRSECDTSVTLGPRTFK-----LPVVPANMQTIIDEKIAEWLAENGYFYIMHrfdpeARIPFIK 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 103 WQEFAGqnpdclehLAAS--SGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTG 180
Cdd:PRK05458 80 DMHEQG--------LIASisVGVKDDEYDFVDQLAAEGLTPEYITIDIAHGHSDSVINMIQHIKKHLPETFVIAGNVGTP 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 181 EMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYP--QLSAVMECADAAhglKGHIISDGGCSCPGDVAKAFGAGADFVM 258
Cdd:PRK05458 152 EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGgwQLAALRWCAKAA---RKPIIADGGIRTHGDIAKSIRFGATMVM 228
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 545687487 259 LGGMLAGHSESGGELIERDGKKYKLFYGMSSEmamkkYAGGvaEYRYV 306
Cdd:PRK05458 229 IGSLFAGHEESPGKTVEIDGKLYKEYFGSASE-----FQKG--EYKNV 269
|
|
| PTZ00314 |
PTZ00314 |
inosine-5'-monophosphate dehydrogenase; Provisional |
118-418 |
8.60e-53 |
|
inosine-5'-monophosphate dehydrogenase; Provisional
Pssm-ID: 240355 [Multi-domain] Cd Length: 495 Bit Score: 184.02 E-value: 8.60e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 118 AASSGTGSSDFEQLEQILEAipQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 197
Cdd:PTZ00314 233 GAAISTRPEDIERAAALIEA--GVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAGADGLRIG 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 198 IGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERD 277
Cdd:PTZ00314 311 MGSGSICITQEVCAVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVMLGSLLAGTEEAPGEYFFKD 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 278 GKKYKLFYGMSSEMAMKKYAGGvaeyryvwrprslvivwrqnswllrggwyssqrsmvNRGSMlgsvekslglrnpEGED 357
Cdd:PTZ00314 391 GVRLKVYRGMGSLEAMLSKESG------------------------------------ERYLD-------------ENET 421
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 545687487 358 NKVfptlraSEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKEL-----SRRTTFIRVTQQ 418
Cdd:PTZ00314 422 IKV------AQGVSGSVVDKGSVAKLIPYLVKGVKHGMQYIGAHSIPELheklySGQVRFERRSGS 481
|
|
| PRK07807 |
PRK07807 |
GuaB1 family IMP dehydrogenase-related protein; |
132-409 |
6.38e-51 |
|
GuaB1 family IMP dehydrogenase-related protein;
Pssm-ID: 181127 [Multi-domain] Cd Length: 479 Bit Score: 178.56 E-value: 6.38e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 132 EQILEAipQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTG 211
Cdd:PRK07807 233 RALLEA--GVDVLVVDTAHGHQEKMLEALRAVRALDPGVPIVAGNVVTAEGTRDLVEAGADIVKVGVGPGAMCTTRMMTG 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 212 VGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGEL-IERDGKKYKLFYGMSSE 290
Cdd:PRK07807 311 VGRPQFSAVLECAAAARELGAHVWADGGVRHPRDVALALAAGASNVMIGSWFAGTYESPGDLmRDRDGRPYKESFGMASA 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 291 MAMKKYAGGVAEYRyvwrprslvivwRQNSWLLRGGwYSSQRsmvnrgsmlgsveksLGLRnpegednkvfptlrasegk 370
Cdd:PRK07807 391 RAVAARTAGDSAFD------------RARKALFEEG-ISTSR---------------MYLD------------------- 423
|
250 260 270
....*....|....*....|....*....|....*....
gi 545687487 371 tvevPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRR 409
Cdd:PRK07807 424 ----PGRPGVEDLLDHITSGVRSSCTYAGARTLAEFHER 458
|
|
| PRK06843 |
PRK06843 |
inosine 5-monophosphate dehydrogenase; Validated |
28-417 |
6.40e-50 |
|
inosine 5-monophosphate dehydrogenase; Validated
Pssm-ID: 180725 [Multi-domain] Cd Length: 404 Bit Score: 174.07 E-value: 6.40e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 28 LDFKDVLLRPKRSTLKSrSEVDLTRSFSfrnsKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSL-VQWQEF 106
Cdd:PRK06843 10 LTFDDVSLIPRKSSVLP-SEVSLKTQLT----KNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIeAQRKEI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 107 AG------------------QNPDCL---EHLAASS------------------------GTGSS-DFEQLEQILEAI-P 139
Cdd:PRK06843 85 EKvktykfqktintngdtneQKPEIFtakQHLEKSDayknaehkedfpnackdlnnklrvGAAVSiDIDTIERVEELVkA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 140 QVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSA 219
Cdd:PRK06843 165 HVDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 220 VMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKyagg 299
Cdd:PRK06843 245 ICDVYEVCKNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKR---- 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 300 vaeyryvwrprslvivwrqnswllrggwyssqrsmvnrgsmlGSVEKSLGLRNpeGEDNKVFPtlrasEGKTVEVPFKGD 379
Cdd:PRK06843 321 ------------------------------------------GSKSRYFQLEN--NEPKKLVP-----EGIEGMVPYSGK 351
|
410 420 430
....*....|....*....|....*....|....*...
gi 545687487 380 VEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQ 417
Cdd:PRK06843 352 LKDILTQLKGGLMSGMGYLGAATISDLKINSKFVKISH 389
|
|
| IMP_DH_rel_1 |
TIGR01303 |
IMP dehydrogenase family protein; This model represents a family of proteins, often annotated ... |
132-411 |
9.05e-49 |
|
IMP dehydrogenase family protein; This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302. [Unknown function, General]
Pssm-ID: 130370 [Multi-domain] Cd Length: 475 Bit Score: 172.79 E-value: 9.05e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 132 EQILEAipQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTG 211
Cdd:TIGR01303 231 KALLDA--GVDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVAGNVVSAEGVRDLLEAGANIIKVGVGPGAMCTTRMMTG 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 212 VGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELI-ERDGKKYKLFYGMsse 290
Cdd:TIGR01303 309 VGRPQFSAVLECAAEARKLGGHVWADGGVRHPRDVALALAAGASNVMVGSWFAGTYESPGDLMrDRDGRPYKESFGM--- 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 291 mamkkyaggvaeyryvwrprslvivwrqnswllrggwySSQRSMVNRGSMLGSVEKSLGLRNPEGednkvfptlrASEGK 370
Cdd:TIGR01303 386 --------------------------------------ASKRAVVARTGADNAFDRARKALFEEG----------ISTSR 417
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 545687487 371 TVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTT 411
Cdd:TIGR01303 418 MGLDPDRGGVEDLIDHIISGVRSSCTYAGASSLEEFHERAV 458
|
|
| PLN02274 |
PLN02274 |
inosine-5'-monophosphate dehydrogenase |
118-314 |
1.59e-36 |
|
inosine-5'-monophosphate dehydrogenase
Pssm-ID: 215154 [Multi-domain] Cd Length: 505 Bit Score: 139.80 E-value: 1.59e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 118 AASSGTGSSDFEQLEQILEAipQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 197
Cdd:PLN02274 240 GAAIGTRESDKERLEHLVKA--GVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAGVDGLRVG 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 198 IGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERD 277
Cdd:PLN02274 318 MGSGSICTTQEVCAVGRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVMMGSFLAGTTEAPGEYFYQD 397
|
170 180 190
....*....|....*....|....*....|....*..
gi 545687487 278 GKKYKLFYGMSSEMAMKKyaGgvAEYRYVWRPRSLVI 314
Cdd:PLN02274 398 GVRVKKYRGMGSLEAMTK--G--SDQRYLGDTAKLKI 430
|
|
| PRK07107 |
PRK07107 |
IMP dehydrogenase; |
109-292 |
2.82e-22 |
|
IMP dehydrogenase;
Pssm-ID: 180842 [Multi-domain] Cd Length: 502 Bit Score: 99.00 E-value: 2.82e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 109 QNPDCL----EHLAASSGTGSSDF-EQLEQILEAipQVKYICLDVANGYSEHFVEFVKDVRKRFPQHT-IMAGNVVTGEM 182
Cdd:PRK07107 220 ENPLELldssKRYVVGAGINTRDYaERVPALVEA--GADVLCIDSSEGYSEWQKRTLDWIREKYGDSVkVGAGNVVDREG 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 183 VEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADA------AHGLKGHIISDGGCSCPGDVAKAFGAGADF 256
Cdd:PRK07107 298 FRYLAEAGADFVKVGIGGGSICITREQKGIGRGQATALIEVAKArdeyfeETGVYIPICSDGGIVYDYHMTLALAMGADF 377
|
170 180 190
....*....|....*....|....*....|....*.
gi 545687487 257 VMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMA 292
Cdd:PRK07107 378 IMLGRYFARFDESPTNKVNINGNYMKEYWGEGSNRA 413
|
|
| TIM_phosphate_binding |
cd04722 |
TIM barrel proteins share a structurally conserved phosphate binding motif and in general ... |
140-261 |
7.81e-06 |
|
TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate comes either from the substrate, as in the case of inosine monophosphate dehydrogenase (IMPDH), or from ribulose-5-phosphate 3-epimerase (RPE) or from cofactors, like FMN.
Pssm-ID: 240073 [Multi-domain] Cd Length: 200 Bit Score: 46.43 E-value: 7.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 140 QVKYICLDVANGYS-EHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEE-LILSGADIIKVGIGPGsvcTTRKKTGVGYPQL 217
Cdd:cd04722 84 GADGVEIHGAVGYLaREDLELIRELREAVPDVKVVVKLSPTGELAAAaAEEAGVDEVGLGNGGG---GGGGRDAVPIADL 160
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 545687487 218 SAvmECADAAHGLKghIISDGGCSCPGDVAKAFGAGADFVMLGG 261
Cdd:cd04722 161 LL--ILAKRGSKVP--VIAGGGINDPEDAAEALALGADGVIVGS 200
|
|
| KDPG_aldolase |
cd00452 |
KDPG and KHG aldolase; KDPG and KHG aldolase. This family belongs to the class I adolases ... |
158-259 |
1.06e-04 |
|
KDPG and KHG aldolase; KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
Pssm-ID: 188632 Cd Length: 190 Bit Score: 42.89 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 158 EFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIkvgIGPGSVcttrkktgvgyPQLsavmecADAAHGLKGHIIsd 237
Cdd:cd00452 44 EAIRALRKEFPEALIGAGTVLTPEQADAAIAAGAQFI---VSPGLD-----------PEV------VKAANRAGIPLL-- 101
|
90 100
....*....|....*....|..
gi 545687487 238 GGCSCPGDVAKAFGAGADFVML 259
Cdd:cd00452 102 PGVATPTEIMQALELGADIVKL 123
|
|
| Glu_synthase |
pfam01645 |
Conserved region in glutamate synthase; This family represents a region of the glutamate ... |
152-260 |
4.61e-03 |
|
Conserved region in glutamate synthase; This family represents a region of the glutamate synthase protein. This region is expressed as a separate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organizms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.
Pssm-ID: 396287 [Multi-domain] Cd Length: 367 Bit Score: 38.85 E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687487 152 YS-EHFVEFVKDVRKRFPQHTIMAGnvVTGEMVEELILSG-----ADIIKV-GIGPG---SVCTTRKKTGVgyPQLSAVM 221
Cdd:pfam01645 184 YSiEDLAQLIYDLKEINPKAPISVK--LVSGHGVGTIAAGvakagADIILIdGYDGGtgaSPKTSIKHAGL--PWELALA 259
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 545687487 222 EcADAAHGLKGH-----IISDGGCSCPGDVAKAFGAGADFVMLG 260
Cdd:pfam01645 260 E-AHQTLKENGLrdrvsLIADGGLRTGADVAKAAALGADAVYIG 302
|
|
| |
