NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|546231576|ref|NP_001271194|]
View 

coiled-coil domain-containing protein 117 isoform d [Homo sapiens]

Protein Classification

CCDC117 domain-containing protein( domain architecture ID 11239344)

CCDC117 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
CCDC117 pfam15810
Coiled-coil domain-containing protein 117; CCDC117 is a family of coiled-coil proteins found ...
9-147 2.44e-64

Coiled-coil domain-containing protein 117; CCDC117 is a family of coiled-coil proteins found in eukaryotes. Proteins in this family are typically between 203 and 279 amino acids in length. There is a conserved MELV sequence motif. The function is not known.


:

Pssm-ID: 434955  Cd Length: 143  Bit Score: 193.10  E-value: 2.44e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 546231576    9 QCEVARRKLQEIEDRIIDEDEE-VEADrNVNHLPSLVLSDTMKTGLKREFDEVFTKKMIESMSRPSMELVLWKPLPELLS 87
Cdd:pfam15810   1 QCEAARRKLQEIEDRIILEDEDeVEAD-SVSRLPVLVMSDSLKEGLKRGFDDILTKKVIESMSRPCMELVLWKPPPEPLP 79
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 546231576   88 DKPKPSSNTKNYTGE---SQAKHVAAGTAFPQrTELFSEPRPTGM--SLYNSLETATSTEEEMEL 147
Cdd:pfam15810  80 DKLKDSSQVKQRKQEtagQQAKTPVAGATFQQ-TETFSEPRQAETcsPLYNSLGTTGSGEEEMEL 143
 
Name Accession Description Interval E-value
CCDC117 pfam15810
Coiled-coil domain-containing protein 117; CCDC117 is a family of coiled-coil proteins found ...
9-147 2.44e-64

Coiled-coil domain-containing protein 117; CCDC117 is a family of coiled-coil proteins found in eukaryotes. Proteins in this family are typically between 203 and 279 amino acids in length. There is a conserved MELV sequence motif. The function is not known.


Pssm-ID: 434955  Cd Length: 143  Bit Score: 193.10  E-value: 2.44e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 546231576    9 QCEVARRKLQEIEDRIIDEDEE-VEADrNVNHLPSLVLSDTMKTGLKREFDEVFTKKMIESMSRPSMELVLWKPLPELLS 87
Cdd:pfam15810   1 QCEAARRKLQEIEDRIILEDEDeVEAD-SVSRLPVLVMSDSLKEGLKRGFDDILTKKVIESMSRPCMELVLWKPPPEPLP 79
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 546231576   88 DKPKPSSNTKNYTGE---SQAKHVAAGTAFPQrTELFSEPRPTGM--SLYNSLETATSTEEEMEL 147
Cdd:pfam15810  80 DKLKDSSQVKQRKQEtagQQAKTPVAGATFQQ-TETFSEPRQAETcsPLYNSLGTTGSGEEEMEL 143
 
Name Accession Description Interval E-value
CCDC117 pfam15810
Coiled-coil domain-containing protein 117; CCDC117 is a family of coiled-coil proteins found ...
9-147 2.44e-64

Coiled-coil domain-containing protein 117; CCDC117 is a family of coiled-coil proteins found in eukaryotes. Proteins in this family are typically between 203 and 279 amino acids in length. There is a conserved MELV sequence motif. The function is not known.


Pssm-ID: 434955  Cd Length: 143  Bit Score: 193.10  E-value: 2.44e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 546231576    9 QCEVARRKLQEIEDRIIDEDEE-VEADrNVNHLPSLVLSDTMKTGLKREFDEVFTKKMIESMSRPSMELVLWKPLPELLS 87
Cdd:pfam15810   1 QCEAARRKLQEIEDRIILEDEDeVEAD-SVSRLPVLVMSDSLKEGLKRGFDDILTKKVIESMSRPCMELVLWKPPPEPLP 79
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 546231576   88 DKPKPSSNTKNYTGE---SQAKHVAAGTAFPQrTELFSEPRPTGM--SLYNSLETATSTEEEMEL 147
Cdd:pfam15810  80 DKLKDSSQVKQRKQEtagQQAKTPVAGATFQQ-TETFSEPRQAETcsPLYNSLGTTGSGEEEMEL 143
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH