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Conserved domains on  [gi|556695369|ref|NP_001273328|]
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nutritionally-regulated adipose and cardiac enriched protein homolog isoform a [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Consortin_C super family cl20010
Consortin C-terminus; Consortin is a trans-Golgi network cargo receptor involved in targeting ...
 33-108 1.22e-20

Consortin C-terminus; Consortin is a trans-Golgi network cargo receptor involved in targeting connexins to the plasma membrane.


The actual alignment was detected with superfamily member pfam15555:

Pssm-ID: 473272  Cd Length: 123  Bit Score: 82.11  E-value: 1.22e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556695369   33 CRAEREDNRKCPPSILKRSRPEHHRPEAKPQRTSRRVWFREPPAVTVHYIADKNATATVRAVCvRPARAGPGPILR 108
Cdd:pfam15555   1 PRAEREGDRRCPPSILRRSRPERRSPGAEPQRTSRHVRFREPLEVAVHYIARRDTTTAIKAPS-RPRPRGGSLLLR 75
 
Name Accession Description Interval E-value
DUF4658 pfam15555
Domain of unknown function (DUF4658); This family of proteins is found in eukaryotes. Proteins ...
 33-108 1.22e-20

Domain of unknown function (DUF4658); This family of proteins is found in eukaryotes. Proteins in this family are typically between 129 and 161 amino acids in length.


Pssm-ID: 464765  Cd Length: 123  Bit Score: 82.11  E-value: 1.22e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556695369   33 CRAEREDNRKCPPSILKRSRPEHHRPEAKPQRTSRRVWFREPPAVTVHYIADKNATATVRAVCvRPARAGPGPILR 108
Cdd:pfam15555   1 PRAEREGDRRCPPSILRRSRPERRSPGAEPQRTSRHVRFREPLEVAVHYIARRDTTTAIKAPS-RPRPRGGSLLLR 75
 
Name Accession Description Interval E-value
DUF4658 pfam15555
Domain of unknown function (DUF4658); This family of proteins is found in eukaryotes. Proteins ...
 33-108 1.22e-20

Domain of unknown function (DUF4658); This family of proteins is found in eukaryotes. Proteins in this family are typically between 129 and 161 amino acids in length.


Pssm-ID: 464765  Cd Length: 123  Bit Score: 82.11  E-value: 1.22e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556695369   33 CRAEREDNRKCPPSILKRSRPEHHRPEAKPQRTSRRVWFREPPAVTVHYIADKNATATVRAVCvRPARAGPGPILR 108
Cdd:pfam15555   1 PRAEREGDRRCPPSILRRSRPERRSPGAEPQRTSRHVRFREPLEVAVHYIARRDTTTAIKAPS-RPRPRGGSLLLR 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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