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Conserved domains on  [gi|566559828|ref|NP_001274462|]
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zinc finger protein 92 isoform 4 [Homo sapiens]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
151-503 3.65e-10

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 62.02  E-value: 3.65e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 151 KPYKCEECGKAFNRSSNLTKHKIIHTGEKPYKC--EECGKAFNRSSTLTKHKRIHTEEKPYKCE---------------- 212
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSkslplsnskassssls 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 213 ECGKAFNQFSILNKH----------------KRIHMEDKPYKC--------------------EECGKAFRVFSILKKHK 256
Cdd:COG5048  112 SSSSNSNDNNLLSSHslppssrdpqlpdllsISNLRNNPLPGNnsssvntpqsnslhpplpanSLSKDPSSNLSLLISSN 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 257 IIHTGEKPYKCEECGKaFNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSSTLTKHKRIHTGEKPYKCEECGKAFKQSSTL 336
Cdd:COG5048  192 VSTSIPSSSENSPLSS-SYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASS 270

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 337 TEHKIIHTGE-------KPYKCEKCGKAFSWSSAFTKHKR--NH--MEDKPYKCEE--CGKAFSVFSTLTKHKIIHTREK 403
Cdd:COG5048  271 QSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHsgESLKPFSCPYslCGKLFSRNDALKRHILLHTSIS 350

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 404 PYKC--EECGKAFNQSSI------FTKHKIIHTEGKSYKCEKCGNAFNQSSNLTARKIIYT---GEKPYKYEECDKAFNK 472
Cdd:COG5048  351 PAKEklLNSSSKFSPLLNneppqsLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHlsfRPYNCKNPPCSKSFNR 430

                        410       420       430
                 ....*....|....*....|....*....|.
gi 566559828 473 FSTLITHQIIYTGEKPCKHECGRAFNKSSNY 503
Cdd:COG5048  431 HYNLIPHKKIHTNHAPLLCSILKSFRRDLDL 461
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
151-503 3.65e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 62.02  E-value: 3.65e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 151 KPYKCEECGKAFNRSSNLTKHKIIHTGEKPYKC--EECGKAFNRSSTLTKHKRIHTEEKPYKCE---------------- 212
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSkslplsnskassssls 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 213 ECGKAFNQFSILNKH----------------KRIHMEDKPYKC--------------------EECGKAFRVFSILKKHK 256
Cdd:COG5048  112 SSSSNSNDNNLLSSHslppssrdpqlpdllsISNLRNNPLPGNnsssvntpqsnslhpplpanSLSKDPSSNLSLLISSN 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 257 IIHTGEKPYKCEECGKaFNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSSTLTKHKRIHTGEKPYKCEECGKAFKQSSTL 336
Cdd:COG5048  192 VSTSIPSSSENSPLSS-SYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASS 270

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 337 TEHKIIHTGE-------KPYKCEKCGKAFSWSSAFTKHKR--NH--MEDKPYKCEE--CGKAFSVFSTLTKHKIIHTREK 403
Cdd:COG5048  271 QSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHsgESLKPFSCPYslCGKLFSRNDALKRHILLHTSIS 350

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 404 PYKC--EECGKAFNQSSI------FTKHKIIHTEGKSYKCEKCGNAFNQSSNLTARKIIYT---GEKPYKYEECDKAFNK 472
Cdd:COG5048  351 PAKEklLNSSSKFSPLLNneppqsLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHlsfRPYNCKNPPCSKSFNR 430

                        410       420       430
                 ....*....|....*....|....*....|.
gi 566559828 473 FSTLITHQIIYTGEKPCKHECGRAFNKSSNY 503
Cdd:COG5048  431 HYNLIPHKKIHTNHAPLLCSILKSFRRDLDL 461
zf-H2C2_2 pfam13465
Zinc-finger double domain;
308-332 3.04e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 3.04e-04
                          10        20
                  ....*....|....*....|....*
gi 566559828  308 LTKHKRIHTGEKPYKCEECGKAFKQ 332
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
151-503 3.65e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 62.02  E-value: 3.65e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 151 KPYKCEECGKAFNRSSNLTKHKIIHTGEKPYKC--EECGKAFNRSSTLTKHKRIHTEEKPYKCE---------------- 212
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSkslplsnskassssls 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 213 ECGKAFNQFSILNKH----------------KRIHMEDKPYKC--------------------EECGKAFRVFSILKKHK 256
Cdd:COG5048  112 SSSSNSNDNNLLSSHslppssrdpqlpdllsISNLRNNPLPGNnsssvntpqsnslhpplpanSLSKDPSSNLSLLISSN 191

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 257 IIHTGEKPYKCEECGKaFNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSSTLTKHKRIHTGEKPYKCEECGKAFKQSSTL 336
Cdd:COG5048  192 VSTSIPSSSENSPLSS-SYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASS 270

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 337 TEHKIIHTGE-------KPYKCEKCGKAFSWSSAFTKHKR--NH--MEDKPYKCEE--CGKAFSVFSTLTKHKIIHTREK 403
Cdd:COG5048  271 QSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHsgESLKPFSCPYslCGKLFSRNDALKRHILLHTSIS 350

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 404 PYKC--EECGKAFNQSSI------FTKHKIIHTEGKSYKCEKCGNAFNQSSNLTARKIIYT---GEKPYKYEECDKAFNK 472
Cdd:COG5048  351 PAKEklLNSSSKFSPLLNneppqsLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHlsfRPYNCKNPPCSKSFNR 430

                        410       420       430
                 ....*....|....*....|....*....|.
gi 566559828 473 FSTLITHQIIYTGEKPCKHECGRAFNKSSNY 503
Cdd:COG5048  431 HYNLIPHKKIHTNHAPLLCSILKSFRRDLDL 461
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
263-424 2.25e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 53.16  E-value: 2.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 263 KPYKCEECGKAFNQFSNLTKHK--IIHTGE--KPYKCDE--CGKAFNQSSTLTKHKRIHTGEKPYKC--EECGKAFKQSS 334
Cdd:COG5048  288 LPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLL 367

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 335 T------LTEHKIIHTGEKPYKCEKCGKAFSWSSAF-TKHKRNHMEDKPY--KCEECGKAFSVFSTLTKHKIIHTREKPY 405
Cdd:COG5048  368 NneppqsLQQYKDLKNDKKSETLSNSCIRNFKRDSNlSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                        170
                 ....*....|....*....
gi 566559828 406 KCEECGKAFNQSSIFTKHK 424
Cdd:COG5048  448 LCSILKSFRRDLDLSNHGK 466
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 177-256 2.25e-05

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 46.63  E-value: 2.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 177 GEKPYKCE--ECGKAFNRSSTLtKHKRIHTEEKPYKCEECGKafnqfsilNKHKRIHMEDKPYKCEECGKAFRVFSILKK 254
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGL-KYHMLHGHQNQKLHENPSP--------EKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ..
gi 566559828 255 HK 256
Cdd:COG5189  417 HR 418
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 317-396 8.72e-05

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 45.09  E-value: 8.72e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 317 GEKPYKCE--ECGKAFKQSSTLTEHKiihtgekpyKCEKCGKAFSWSSAFTKHKRNHMEDKPYKCEECGKAFSVFSTLTK 394
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ..
gi 566559828 395 HK 396
Cdd:COG5189  417 HR 418
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
95-228 1.55e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 44.30  E-value: 1.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828  95 KPFKCKNRGKSFCMLSQLTQHK--KIHTREYSYKCEE----CGKAFNWSSTLTKHKIIHTGEKPYKC------------- 155
Cdd:COG5048  288 LPIKSKQCNISFSRSSPLTRHLrsVNHSGESLKPFSCpyslCGKLFSRNDALKRHILLHTSISPAKEkllnssskfspll 367

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 156 ------------------------EECGKAFNRSSNLTKHKIIHTGEKPY--KCEECGKAFNRSSTLTKHKRIHTEEKPY 209
Cdd:COG5048  368 nneppqslqqykdlkndkksetlsNSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                        170
                 ....*....|....*....
gi 566559828 210 KCEECGKAFNQFSILNKHK 228
Cdd:COG5048  448 LCSILKSFRRDLDLSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
308-332 3.04e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 3.04e-04
                          10        20
                  ....*....|....*....|....*
gi 566559828  308 LTKHKRIHTGEKPYKCEECGKAFKQ 332
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 261-340 4.34e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 42.78  E-value: 4.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 261 GEKPYKCE--ECGKAFNQFSNLTKHKiihtgekpyKCDECGKAFNQSSTLTKHKRIHTGEKPYKCEECGKAFKQSSTLTE 338
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ..
gi 566559828 339 HK 340
Cdd:COG5189  417 HR 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
279-304 5.06e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.06e-04
                          10        20
                  ....*....|....*....|....*.
gi 566559828  279 NLTKHKIIHTGEKPYKCDECGKAFNQ 304
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
252-276 5.16e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.16e-04
                          10        20
                  ....*....|....*....|....*
gi 566559828  252 LKKHKIIHTGEKPYKCEECGKAFNQ 276
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 205-284 6.59e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 42.01  E-value: 6.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 205 EEKPYKCE--ECGKAF-NQFSIlnKHKRIHMEDKPYKCEECGKafrvfsilKKHKIIHTGEKPYKCEECGKAFNQFSNLT 281
Cdd:COG5189  346 DGKPYKCPveGCNKKYkNQNGL--KYHMLHGHQNQKLHENPSP--------EKMNIFSAKDKPYRCEVCDKRYKNLNGLK 415


                 ...
gi 566559828 282 KHK 284
Cdd:COG5189  416 YHR 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
167-192 7.07e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 7.07e-04
                          10        20
                  ....*....|....*....|....*.
gi 566559828  167 NLTKHKIIHTGEKPYKCEECGKAFNR 192
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
196-220 1.51e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.51e-03
                          10        20
                  ....*....|....*....|....*
gi 566559828  196 LTKHKRIHTEEKPYKCEECGKAFNQ 220
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
374-447 1.89e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 40.83  E-value: 1.89e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 566559828 374 DKPYKCEECGKAFSVFSTLTKHKIIHTREKPYKC--EECGKAFNQSSIFTKHKIIHTEGKSYKCEKCGNAFNQSSN 447
Cdd:COG5048   31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKAS 106
zf-H2C2_2 pfam13465
Zinc-finger double domain;
140-164 1.92e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.92e-03
                          10        20
                  ....*....|....*....|....*
gi 566559828  140 LTKHKIIHTGEKPYKCEECGKAFNR 164
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 232-312 3.99e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.70  E-value: 3.99e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 566559828 232 MEDKPYKCE--ECGKAFRVFSILKKHKiihtgekpyKCEECGKAFNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSSTLT 309
Cdd:COG5189  345 KDGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLK 415


                 ...
gi 566559828 310 KHK 312
Cdd:COG5189  416 YHR 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
336-359 6.83e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 6.83e-03
                          10        20
                  ....*....|....*....|....
gi 566559828  336 LTEHKIIHTGEKPYKCEKCGKAFS 359
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
234-306 6.90e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 38.91  E-value: 6.90e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 566559828 234 DKPYKCEECGKAFRVFSILKKHKIIHTGEKPYKC--EECGKAFNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSS 306
Cdd:COG5048   31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKA 105
zf-H2C2_2 pfam13465
Zinc-finger double domain;
224-246 7.39e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 7.39e-03
                          10        20
                  ....*....|....*....|...
gi 566559828  224 LNKHKRIHMEDKPYKCEECGKAF 246
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
392-416 7.46e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 7.46e-03
                          10        20
                  ....*....|....*....|....*
gi 566559828  392 LTKHKIIHTREKPYKCEECGKAFNQ 416
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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