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Conserved domains on  [gi|663071035|ref|NP_001284586|]
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kinesin-like protein KIF2C isoform 4 [Homo sapiens]

Protein Classification

kinesin family protein( domain architecture ID 10102678)

kinesin family protein is a microtubule-dependent molecular motor that plays an important role in intracellular transport and in cell division and has ATPase-containing motor domain; such as KIF2, a plus end-directed microtubule-dependent motor expressed in neurons that has been associated with axonal transport, neuron development, and lysosomal translocation (splice variants)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
KISc_KIF2_like cd01367
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a ...
145-473 0e+00

Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


:

Pssm-ID: 276818 [Multi-domain]  Cd Length: 328  Bit Score: 604.67  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 145 RICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIF 224
Cdd:cd01367    1 KIKVCVRKRPLNKKEVAKKEIDVVSVPSKLTLIVHEPKLKVDLTKYIENHTFRFDYVFDESSSNETVYRSTVKPLVPHIF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 225 EGGKATCFAYGQTGSGKTHTMGGDLSGkaQNASKGIYAMASRDVFLLKNQPCYrKLGLEVYVTFFEIYNGKLFDLLNKKA 304
Cdd:cd01367   81 EGGKATCFAYGQTGSGKTYTMGGDFSG--QEESKGIYALAARDVFRLLNKLPY-KDNLGVTVSFFEIYGGKVFDLLNRKK 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 305 KLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILR--AKGRMHGKFSLVDLAG 382
Cdd:cd01367  158 RVRLREDGKGEVQVVGLTEKPVTSAEELLELIESGSSLRTTGQTSANSQSSRSHAILQIILRdrGTNKLHGKLSFVDLAG 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 383 NERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYT 462
Cdd:cd01367  238 SERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHIPFRGSKLTQVLKDSFIGENSKTCMIATISPGASSCEHT 317
                        330
                 ....*....|.
gi 663071035 463 LNTLRYADRVK 473
Cdd:cd01367  318 LNTLRYADRVK 328
 
Name Accession Description Interval E-value
KISc_KIF2_like cd01367
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a ...
145-473 0e+00

Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276818 [Multi-domain]  Cd Length: 328  Bit Score: 604.67  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 145 RICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIF 224
Cdd:cd01367    1 KIKVCVRKRPLNKKEVAKKEIDVVSVPSKLTLIVHEPKLKVDLTKYIENHTFRFDYVFDESSSNETVYRSTVKPLVPHIF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 225 EGGKATCFAYGQTGSGKTHTMGGDLSGkaQNASKGIYAMASRDVFLLKNQPCYrKLGLEVYVTFFEIYNGKLFDLLNKKA 304
Cdd:cd01367   81 EGGKATCFAYGQTGSGKTYTMGGDFSG--QEESKGIYALAARDVFRLLNKLPY-KDNLGVTVSFFEIYGGKVFDLLNRKK 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 305 KLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILR--AKGRMHGKFSLVDLAG 382
Cdd:cd01367  158 RVRLREDGKGEVQVVGLTEKPVTSAEELLELIESGSSLRTTGQTSANSQSSRSHAILQIILRdrGTNKLHGKLSFVDLAG 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 383 NERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYT 462
Cdd:cd01367  238 SERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHIPFRGSKLTQVLKDSFIGENSKTCMIATISPGASSCEHT 317
                        330
                 ....*....|.
gi 663071035 463 LNTLRYADRVK 473
Cdd:cd01367  318 LNTLRYADRVK 328
Kinesin pfam00225
Kinesin motor domain;
151-474 1.42e-137

Kinesin motor domain;


Pssm-ID: 459720 [Multi-domain]  Cd Length: 326  Bit Score: 403.88  E-value: 1.42e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  151 RKRPLNKQELAKKEIDVISipskCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKAT 230
Cdd:pfam00225   1 RVRPLNEREKERGSSVIVS----VESVDSETVESSHLTNKNRTKTFTFDKVFDPEATQEDVYEETAKPLVESVLEGYNVT 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  231 CFAYGQTGSGKTHTMGGDlsgkaqNASKGIYAMASRDVFLLKNQpCYRKLGLEVYVTFFEIYNGKLFDLL----NKKAKL 306
Cdd:pfam00225  77 IFAYGQTGSGKTYTMEGS------DEQPGIIPRALEDLFDRIQK-TKERSEFSVKVSYLEIYNEKIRDLLspsnKNKRKL 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  307 RVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGR--------MHGKFSLV 378
Cdd:pfam00225 150 RIREDPKKGVYVKGLTEVEVSSAEEVLELLQLGNKNRTVAATKMNEESSRSHAIFTITVEQRNRstggeesvKTGKLNLV 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  379 DLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKA-HTPFRESKLTQVLRDSFIGeNSRTCMIATISPGIS 457
Cdd:pfam00225 230 DLAGSERASKTGAAGGQRLKEAANINKSLSALGNVISALADKKSkHIPYRDSKLTRLLQDSLGG-NSKTLMIANISPSSS 308
                         330
                  ....*....|....*..
gi 663071035  458 SCEYTLNTLRYADRVKE 474
Cdd:pfam00225 309 NYEETLSTLRFASRAKN 325
KISc smart00129
Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play ...
145-475 1.32e-122

Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.


Pssm-ID: 214526 [Multi-domain]  Cd Length: 335  Bit Score: 365.74  E-value: 1.32e-122
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035   145 RICVCVRKRPLNKQELAKKEIDVISIPSKC---LLLVHEPKLKVDLTkylenqaFCFDFAFDETASNEVVYRFTARPLVQ 221
Cdd:smart00129   1 NIRVVVRVRPLNKREKSRKSPSVVPFPDKVgktLTVRSPKNRQGEKK-------FTFDKVFDATASQEDVFEETAAPLVD 73
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035   222 TIFEGGKATCFAYGQTGSGKTHTMGGDlsgkaqNASKGIYAMASRDVF-LLKNQPcyRKLGLEVYVTFFEIYNGKLFDLL 300
Cdd:smart00129  74 SVLEGYNATIFAYGQTGSGKTYTMIGT------PDSPGIIPRALKDLFeKIDKRE--EGWQFSVKVSYLEIYNEKIRDLL 145
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035   301 NK-KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRM-------H 372
Cdd:smart00129 146 NPsSKKLEIREDEKGGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFTITVEQKIKNsssgsgkA 225
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035   373 GKFSLVDLAGNERGADTsSADRQTRMEGAEINKSLLALKECIRALGQN--KAHTPFRESKLTQVLRDSFiGENSRTCMIA 450
Cdd:smart00129 226 SKLNLVDLAGSERAKKT-GAEGDRLKEAGNINKSLSALGNVINALAQHskSRHIPYRDSKLTRLLQDSL-GGNSKTLMIA 303
                          330       340
                   ....*....|....*....|....*
gi 663071035   451 TISPGISSCEYTLNTLRYADRVKEL 475
Cdd:smart00129 304 NVSPSSSNLEETLSTLRFASRAKEI 328
KIP1 COG5059
Kinesin-like protein [Cytoskeleton];
148-574 3.12e-62

Kinesin-like protein [Cytoskeleton];


Pssm-ID: 227392 [Multi-domain]  Cd Length: 568  Bit Score: 215.76  E-value: 3.12e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 148 VCVRKRPLNKQELAKKEIDVISIPSK--CLLLVHEPKLKVDLTKYLENQaFCFDFAFDETASNEVVYRFTARPLVQTIFE 225
Cdd:COG5059    9 LKSRLSSRNEKSVSDIKSTIRIIPGElgERLINTSKKSHVSLEKSKEGT-YAFDKVFGPSATQEDVYEETIKPLIDSLLL 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 226 GGKATCFAYGQTGSGKTHTMGGDLSgkaqnaSKGIYAMASRDVFlLKNQPCYRKLGLEVYVTFFEIYNGKLFDLL-NKKA 304
Cdd:COG5059   88 GYNCTVFAYGQTGSGKTYTMSGTEE------EPGIIPLSLKELF-SKLEDLSMTKDFAVSISYLEIYNEKIYDLLsPNEE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 305 KLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRMHG-----KFSLVD 379
Cdd:COG5059  161 SLNIREDSLLGVKVAGLTEKHVSSKEEILDLLRKGEKNRTTASTEINDESSRSHSIFQIELASKNKVSGtsetsKLSLVD 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 380 LAGNERGADTssADRQTRM-EGAEINKSLLALKECIRALGQNK--AHTPFRESKLTQVLRDSfIGENSRTCMIATISPGI 456
Cdd:COG5059  241 LAGSERAART--GNRGTRLkEGASINKSLLTLGNVINALGDKKksGHIPYRESKLTRLLQDS-LGGNCNTRVICTISPSS 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 457 SSCEYTLNTLRYADRVKELSPHSGPSGEQLIQMETEEMEACSNGALIPGNLSKEEEELSSQMSSFNE--AMTQIRELEEK 534
Cdd:COG5059  318 NSFEETINTLKFASRAKSIKNKIQVNSSSDSSREIEEIKFDLSEDRSEIEILVFREQSQLSQSSLSGifAYMQSLKKETE 397
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 663071035 535 AMEE-----LKEIIQQGPDWLELSEMTEQpdyDLETFVNKAESAL 574
Cdd:COG5059  398 TLKSridliMKSIISGTFERKKLLKEEGW---KYKSTLQFLRIEI 439
PLN03188 PLN03188
kinesin-12 family protein; Provisional
148-473 2.80e-36

kinesin-12 family protein; Provisional


Pssm-ID: 215621 [Multi-domain]  Cd Length: 1320  Bit Score: 145.85  E-value: 2.80e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  148 VCVRKRPLNKQELAKKEIDVISIPSKCLLlvhepklkvdltkyleNQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGG 227
Cdd:PLN03188  102 VIVRMKPLNKGEEGEMIVQKMSNDSLTIN----------------GQTFTFDSIADPESTQEDIFQLVGAPLVENCLAGF 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  228 KATCFAYGQTGSGKTHTMGG--------DLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDL 299
Cdd:PLN03188  166 NSSVFAYGQTGSGKTYTMWGpanglleeHLSGDQQGLTPRVFERLFARINEEQIKHADRQLKYQCRCSFLEIYNEQITDL 245
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  300 LNKKAK-LRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIIL--RAKGRMHG--- 373
Cdd:PLN03188  246 LDPSQKnLQIREDVKSGVYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVesRCKSVADGlss 325
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  374 ----KFSLVDLAGNERGADTSSADRQTRmEGAEINKSLLALKECIRALGQ-----NKAHTPFRESKLTQVLRDSfIGENS 444
Cdd:PLN03188  326 fktsRINLVDLAGSERQKLTGAAGDRLK-EAGNINRSLSQLGNLINILAEisqtgKQRHIPYRDSRLTFLLQES-LGGNA 403
                         330       340
                  ....*....|....*....|....*....
gi 663071035  445 RTCMIATISPGISSCEYTLNTLRYADRVK 473
Cdd:PLN03188  404 KLAMVCAISPSQSCKSETFSTLRFAQRAK 432
 
Name Accession Description Interval E-value
KISc_KIF2_like cd01367
Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a ...
145-473 0e+00

Kinesin motor domain, KIF2-like group; Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276818 [Multi-domain]  Cd Length: 328  Bit Score: 604.67  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 145 RICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIF 224
Cdd:cd01367    1 KIKVCVRKRPLNKKEVAKKEIDVVSVPSKLTLIVHEPKLKVDLTKYIENHTFRFDYVFDESSSNETVYRSTVKPLVPHIF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 225 EGGKATCFAYGQTGSGKTHTMGGDLSGkaQNASKGIYAMASRDVFLLKNQPCYrKLGLEVYVTFFEIYNGKLFDLLNKKA 304
Cdd:cd01367   81 EGGKATCFAYGQTGSGKTYTMGGDFSG--QEESKGIYALAARDVFRLLNKLPY-KDNLGVTVSFFEIYGGKVFDLLNRKK 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 305 KLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILR--AKGRMHGKFSLVDLAG 382
Cdd:cd01367  158 RVRLREDGKGEVQVVGLTEKPVTSAEELLELIESGSSLRTTGQTSANSQSSRSHAILQIILRdrGTNKLHGKLSFVDLAG 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 383 NERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYT 462
Cdd:cd01367  238 SERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHIPFRGSKLTQVLKDSFIGENSKTCMIATISPGASSCEHT 317
                        330
                 ....*....|.
gi 663071035 463 LNTLRYADRVK 473
Cdd:cd01367  318 LNTLRYADRVK 328
Kinesin pfam00225
Kinesin motor domain;
151-474 1.42e-137

Kinesin motor domain;


Pssm-ID: 459720 [Multi-domain]  Cd Length: 326  Bit Score: 403.88  E-value: 1.42e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  151 RKRPLNKQELAKKEIDVISipskCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKAT 230
Cdd:pfam00225   1 RVRPLNEREKERGSSVIVS----VESVDSETVESSHLTNKNRTKTFTFDKVFDPEATQEDVYEETAKPLVESVLEGYNVT 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  231 CFAYGQTGSGKTHTMGGDlsgkaqNASKGIYAMASRDVFLLKNQpCYRKLGLEVYVTFFEIYNGKLFDLL----NKKAKL 306
Cdd:pfam00225  77 IFAYGQTGSGKTYTMEGS------DEQPGIIPRALEDLFDRIQK-TKERSEFSVKVSYLEIYNEKIRDLLspsnKNKRKL 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  307 RVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGR--------MHGKFSLV 378
Cdd:pfam00225 150 RIREDPKKGVYVKGLTEVEVSSAEEVLELLQLGNKNRTVAATKMNEESSRSHAIFTITVEQRNRstggeesvKTGKLNLV 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  379 DLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKA-HTPFRESKLTQVLRDSFIGeNSRTCMIATISPGIS 457
Cdd:pfam00225 230 DLAGSERASKTGAAGGQRLKEAANINKSLSALGNVISALADKKSkHIPYRDSKLTRLLQDSLGG-NSKTLMIANISPSSS 308
                         330
                  ....*....|....*..
gi 663071035  458 SCEYTLNTLRYADRVKE 474
Cdd:pfam00225 309 NYEETLSTLRFASRAKN 325
KISc cd00106
Kinesin motor domain; Kinesin motor domain. This catalytic (head) domain has ATPase activity ...
145-473 1.57e-126

Kinesin motor domain; Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276812 [Multi-domain]  Cd Length: 326  Bit Score: 375.44  E-value: 1.57e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 145 RICVCVRKRPLNKQElAKKEIDVISIPSKCLLLVHEPKlkvdlTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIF 224
Cdd:cd00106    1 NVRVAVRVRPLNGRE-ARSAKSVISVDGGKSVVLDPPK-----NRVAPPKTFAFDAVFDSTSTQEEVYEGTAKPLVDSAL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 225 EGGKATCFAYGQTGSGKTHTMGGDLSGkaqnaSKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLN--K 302
Cdd:cd00106   75 EGYNGTIFAYGQTGSGKTYTMLGPDPE-----QRGIIPRALEDIFERIDKRKETKSSFSVSASYLEIYNEKIYDLLSpvP 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 303 KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRM-------HGKF 375
Cdd:cd00106  150 KKPLSLREDPKRGVYVKGLTEVEVGSLEDALELLDAGNKNRTTASTNMNEHSSRSHAVFTIHVKQRNREksgesvtSSKL 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 376 SLVDLAGNERGADTsSADRQTRMEGAEINKSLLALKECIRALGQNKA-HTPFRESKLTQVLRDSFIGeNSRTCMIATISP 454
Cdd:cd00106  230 NLVDLAGSERAKKT-GAEGDRLKEGGNINKSLSALGKVISALADGQNkHIPYRDSKLTRLLQDSLGG-NSKTIMIACISP 307
                        330
                 ....*....|....*....
gi 663071035 455 GISSCEYTLNTLRYADRVK 473
Cdd:cd00106  308 SSENFEETLSTLRFASRAK 326
KISc smart00129
Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play ...
145-475 1.32e-122

Kinesin motor, catalytic domain. ATPase; Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.


Pssm-ID: 214526 [Multi-domain]  Cd Length: 335  Bit Score: 365.74  E-value: 1.32e-122
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035   145 RICVCVRKRPLNKQELAKKEIDVISIPSKC---LLLVHEPKLKVDLTkylenqaFCFDFAFDETASNEVVYRFTARPLVQ 221
Cdd:smart00129   1 NIRVVVRVRPLNKREKSRKSPSVVPFPDKVgktLTVRSPKNRQGEKK-------FTFDKVFDATASQEDVFEETAAPLVD 73
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035   222 TIFEGGKATCFAYGQTGSGKTHTMGGDlsgkaqNASKGIYAMASRDVF-LLKNQPcyRKLGLEVYVTFFEIYNGKLFDLL 300
Cdd:smart00129  74 SVLEGYNATIFAYGQTGSGKTYTMIGT------PDSPGIIPRALKDLFeKIDKRE--EGWQFSVKVSYLEIYNEKIRDLL 145
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035   301 NK-KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRM-------H 372
Cdd:smart00129 146 NPsSKKLEIREDEKGGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFTITVEQKIKNsssgsgkA 225
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035   373 GKFSLVDLAGNERGADTsSADRQTRMEGAEINKSLLALKECIRALGQN--KAHTPFRESKLTQVLRDSFiGENSRTCMIA 450
Cdd:smart00129 226 SKLNLVDLAGSERAKKT-GAEGDRLKEAGNINKSLSALGNVINALAQHskSRHIPYRDSKLTRLLQDSL-GGNSKTLMIA 303
                          330       340
                   ....*....|....*....|....*
gi 663071035   451 TISPGISSCEYTLNTLRYADRVKEL 475
Cdd:smart00129 304 NVSPSSSNLEETLSTLRFASRAKEI 328
KISc_KIP3_like cd01370
Kinesin motor domain, KIP3-like subgroup; Kinesin motor domain, KIP3-like subgroup. The yeast ...
145-475 1.99e-92

Kinesin motor domain, KIP3-like subgroup; Kinesin motor domain, KIP3-like subgroup. The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276821 [Multi-domain]  Cd Length: 345  Bit Score: 288.47  E-value: 1.99e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 145 RICVCVRKRPLNKQELAKKEIDVISIPSKcLLLVHEPKLKVDLTKYLEN------------QAFCFDFAFDETASNEVVY 212
Cdd:cd01370    1 SLTVAVRVRPFSEKEKNEGFRRIVKVMDN-HMLVFDPKDEEDGFFHGGSnnrdrrkrrnkeLKYVFDRVFDETSTQEEVY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 213 RFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGkaqnasKGIYAMASRDVF----LLKNQPCYrklglEVYVTF 288
Cdd:cd01370   80 EETTKPLVDGVLNGYNATVFAYGATGAGKTHTMLGTPQE------PGLMVLTMKELFkrieSLKDEKEF-----EVSMSY 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 289 FEIYNGKLFDLLNKKAK-LRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRA 367
Cdd:cd01370  149 LEIYNETIRDLLNPSSGpLELREDAQNGIVVAGLTEHSPKSAEEILELLMKGNRNRTQEPTDANATSSRSHAVLQITVRQ 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 368 KGR--------MHGKFSLVDLAGNERGADTSsaDRQTRM-EGAEINKSLLALKECIRALGQNK---AHTPFRESKLTQVL 435
Cdd:cd01370  229 QDKtasinqqvRQGKLSLIDLAGSERASATN--NRGQRLkEGANINRSLLALGNCINALADPGkknKHIPYRDSKLTRLL 306
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 663071035 436 RDSfIGENSRTCMIATISPGISSCEYTLNTLRYADRVKEL 475
Cdd:cd01370  307 KDS-LGGNCRTVMIANISPSSSSYEETHNTLKYANRAKNI 345
KISc_CENP_E cd01374
Kinesin motor domain, CENP-E/KIP2-like subgroup; Kinesin motor domain, CENP-E/KIP2-like ...
146-475 3.95e-81

Kinesin motor domain, CENP-E/KIP2-like subgroup; Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276825 [Multi-domain]  Cd Length: 321  Bit Score: 258.42  E-value: 3.95e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 146 ICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPklkvdltkyleNQAFCFDFAFDETASNEVVYRFTARPLVQTIFE 225
Cdd:cd01374    2 ITVTVRVRPLNSREIGINEQVAWEIDNDTIYLVEPP-----------STSFTFDHVFGGDSTNREVYELIAKPVVKSALE 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 226 GGKATCFAYGQTGSGKTHTMGGDlsgkaqNASKGIYAMASRDVFLLKNQPCYRKLGLEvyVTFFEIYNGKLFDLLN-KKA 304
Cdd:cd01374   71 GYNGTIFAYGQTSSGKTFTMSGD------EDEPGIIPLAIRDIFSKIQDTPDREFLLR--VSYLEIYNEKINDLLSpTSQ 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 305 KLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIIL--RAKGRMHGK------FS 376
Cdd:cd01374  143 NLKIRDDVEKGVYVAGLTEEIVSSPEHALSLIARGEKNRHVGETDMNERSSRSHTIFRITIesSERGELEEGtvrvstLN 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 377 LVDLAGNERGADT-SSADRqtRMEGAEINKSLLALKECIRAL--GQNKAHTPFRESKLTQVLRDSFIGeNSRTCMIATIS 453
Cdd:cd01374  223 LIDLAGSERAAQTgAAGVR--RKEGSHINKSLLTLGTVISKLseGKVGGHIPYRDSKLTRILQPSLGG-NSRTAIICTIT 299
                        330       340
                 ....*....|....*....|..
gi 663071035 454 PGISSCEYTLNTLRYADRVKEL 475
Cdd:cd01374  300 PAESHVEETLNTLKFASRAKKI 321
KISc_KIF1A_KIF1B cd01365
Kinesin motor domain, KIF1_like proteins; Kinesin motor domain, KIF1_like proteins. KIF1A ...
145-473 6.67e-81

Kinesin motor domain, KIF1_like proteins; Kinesin motor domain, KIF1_like proteins. KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.


Pssm-ID: 276816 [Multi-domain]  Cd Length: 361  Bit Score: 259.21  E-value: 6.67e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 145 RICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKL-KVDLTKYLENQAFCFDFAF------DET-ASNEVVYRFTA 216
Cdd:cd01365    2 NVKVAVRVRPFNSREKERNSKCIVQMSGKETTLKNPKQAdKNNKATREVPKSFSFDYSYwshdseDPNyASQEQVYEDLG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 217 RPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDlsgkaqNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKL 296
Cdd:cd01365   82 EELLQHAFEGYNVCLFAYGQTGSGKSYTMMGT------QEQPGIIPRLCEDLFSRIADTTNQNMSYSVEVSYMEIYNEKV 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 297 FDLLNKKAK-----LRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAK--- 368
Cdd:cd01365  156 RDLLNPKPKknkgnLKVREHPVLGPYVEDLSKLAVTSYEDIQDLMDEGNKSRTVAATNMNDTSSRSHAVFTIVLTQKrhd 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 369 ------GRMHGKFSLVDLAGNERgADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHT--------PFRESKLTQV 434
Cdd:cd01365  236 aetnltTEKVSKISLVDLAGSER-ASSTGATGDRLKEGANINKSLTTLGKVISALADMSSGKskkkssfiPYRDSVLTWL 314
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 663071035 435 LRDSfIGENSRTCMIATISPGISSCEYTLNTLRYADRVK 473
Cdd:cd01365  315 LKEN-LGGNSKTAMIAAISPADINYEETLSTLRYADRAK 352
KISc_KIF4 cd01372
Kinesin motor domain, KIF4-like subfamily; Kinesin motor domain, KIF4-like subfamily. Members ...
148-471 9.34e-79

Kinesin motor domain, KIF4-like subfamily; Kinesin motor domain, KIF4-like subfamily. Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276823 [Multi-domain]  Cd Length: 341  Bit Score: 252.64  E-value: 9.34e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 148 VCVRKRPLNKQELAKKEIDVISIPSKclllvhEPKLKVDltkylENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGG 227
Cdd:cd01372    5 VAVRVRPLLPKEIIEGCRICVSFVPG------EPQVTVG-----TDKSFTFDYVFDPSTEQEEVYNTCVAPLVDGLFEGY 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 228 KATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVF----LLKNQPCYrklglEVYVTFFEIYNGKLFDLLN-- 301
Cdd:cd01372   74 NATVLAYGQTGSGKTYTMGTAYTAEEDEEQVGIIPRAIQHIFkkieKKKDTFEF-----QLKVSFLEIYNEEIRDLLDpe 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 302 --KKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGR--------- 370
Cdd:cd01372  149 tdKKPTISIREDSKGGITIVGLTEVTVLSAEDMMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTKKngpiapmsa 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 371 ------MHGKFSLVDLAGNERGADTSSADRQTRmEGAEINKSLLALKECIRALG---QNKAHTPFRESKLTQVLRDSfIG 441
Cdd:cd01372  229 ddknstFTSKFHFVDLAGSERLKRTGATGDRLK-EGISINSGLLALGNVISALGdesKKGAHVPYRDSKLTRLLQDS-LG 306
                        330       340       350
                 ....*....|....*....|....*....|
gi 663071035 442 ENSRTCMIATISPGISSCEYTLNTLRYADR 471
Cdd:cd01372  307 GNSHTLMIACVSPADSNFEETLNTLKYANR 336
KISc_KIF3 cd01371
Kinesin motor domain, kinesins II or KIF3_like proteins; Kinesin motor domain, kinesins II or ...
148-473 1.26e-72

Kinesin motor domain, kinesins II or KIF3_like proteins; Kinesin motor domain, kinesins II or KIF3_like proteins. Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276822 [Multi-domain]  Cd Length: 334  Bit Score: 236.59  E-value: 1.26e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 148 VCVRKRPLNKQELAKKEIDVISI-PSKCLLLVHEPKLKV-DLTKylenqAFCFDFAFDETASNEVVYRFTARPLVQTIFE 225
Cdd:cd01371    5 VVVRCRPLNGKEKAAGALQIVDVdEKRGQVSVRNPKATAnEPPK-----TFTFDAVFDPNSKQLDVYDETARPLVDSVLE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 226 GGKATCFAYGQTGSGKTHTMGGDlsgKAQNASKGIYAMASRDVF--LLKNQPCYRKLgleVYVTFFEIYNGKLFDLLNK- 302
Cdd:cd01371   80 GYNGTIFAYGQTGTGKTYTMEGK---REDPELRGIIPNSFAHIFghIARSQNNQQFL---VRVSYLEIYNEEIRDLLGKd 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 303 -KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRA-----KGRMH---G 373
Cdd:cd01371  154 qTKRLELKERPDTGVYVKDLSMFVVKNADEMEHVMNLGNKNRSVGATNMNEDSSRSHAIFTITIECsekgeDGENHirvG 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 374 KFSLVDLAGNERGADTsSADRQTRMEGAEINKSLLALKECIRALGQNKA-HTPFRESKLTQVLRDSfIGENSRTCMIATI 452
Cdd:cd01371  234 KLNLVDLAGSERQSKT-GATGERLKEATKINLSLSALGNVISALVDGKStHIPYRDSKLTRLLQDS-LGGNSKTVMCANI 311
                        330       340
                 ....*....|....*....|.
gi 663071035 453 SPGISSCEYTLNTLRYADRVK 473
Cdd:cd01371  312 GPADYNYDETLSTLRYANRAK 332
KISc_C_terminal cd01366
Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins; Kinesin motor domain, ...
146-473 9.74e-72

Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276817 [Multi-domain]  Cd Length: 329  Bit Score: 234.03  E-value: 9.74e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 146 ICVCVRKRPLNKQELAKkEIDVISIPSkclllvhEPKLKVDLT-KYLENQAFCFDFAFDETASNEVVYRfTARPLVQTIF 224
Cdd:cd01366    4 IRVFCRVRPLLPSEENE-DTSHITFPD-------EDGQTIELTsIGAKQKEFSFDKVFDPEASQEDVFE-EVSPLVQSAL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 225 EGGKATCFAYGQTGSGKTHTMGGDLSgkaqnaSKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKKA 304
Cdd:cd01366   75 DGYNVCIFAYGQTGSGKTYTMEGPPE------SPGIIPRALQELFNTIKELKEKGWSYTIKASMLEIYNETIRDLLAPGN 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 305 ----KLRVLEDG-KQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKG-----RMHGK 374
Cdd:cd01366  149 apqkKLEIRHDSeKGDTTVTNLTEVKVSSPEEVRQLLKKASKNRSTASTAMNEHSSRSHSVFILHISGRNlqtgeISVGK 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 375 FSLVDLAGNERGADTSSADRQTRmEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGeNSRTCMIATISP 454
Cdd:cd01366  229 LNLVDLAGSERLNKSGATGDRLK-ETQAINKSLSALGDVISALRQKQSHIPYRNSKLTYLLQDSLGG-NSKTLMFVNISP 306
                        330
                 ....*....|....*....
gi 663071035 455 GISSCEYTLNTLRYADRVK 473
Cdd:cd01366  307 AESNLNETLNSLRFASKVN 325
KISc_BimC_Eg5 cd01364
Kinesin motor domain, BimC/Eg5 spindle pole proteins; Kinesin motor domain, BimC/Eg5 spindle ...
143-473 1.02e-69

Kinesin motor domain, BimC/Eg5 spindle pole proteins; Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276815 [Multi-domain]  Cd Length: 353  Bit Score: 229.52  E-value: 1.02e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 143 EHRICVCVRKRPLNKQELAKKEIDVISI--PSKCLLLVHEPKLKVDLTKylenqAFCFDFAFDETASNEVVYRFTARPLV 220
Cdd:cd01364    1 GKNIQVVVRCRPFNLRERKASSHSVVEVdpVRKEVSVRTGGLADKSSTK-----TYTFDMVFGPEAKQIDVYRSVVCPIL 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 221 QTIFEGGKATCFAYGQTGSGKTHTMGGDLS-----GKAQNASKGIYAMASRDVFllknqPCYRKLGLE--VYVTFFEIYN 293
Cdd:cd01364   76 DEVLMGYNCTIFAYGQTGTGKTYTMEGDRSpneeyTWELDPLAGIIPRTLHQLF-----EKLEDNGTEysVKVSYLEIYN 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 294 GKLFDLL----NKKAKLRVLED--GKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRA 367
Cdd:cd01364  151 EELFDLLspssDVSERLRMFDDprNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRKTAATLMNAQSSRSHSVFSITIHI 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 368 KGRMH--------GKFSLVDLAGNErGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSf 439
Cdd:cd01364  231 KETTIdgeelvkiGKLNLVDLAGSE-NIGRSGAVDKRAREAGNINQSLLTLGRVITALVERAPHVPYRESKLTRLLQDS- 308
                        330       340       350
                 ....*....|....*....|....*....|....
gi 663071035 440 IGENSRTCMIATISPGISSCEYTLNTLRYADRVK 473
Cdd:cd01364  309 LGGRTKTSIIATISPASVNLEETLSTLEYAHRAK 342
KISc_KHC_KIF5 cd01369
Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup; Kinesin motor domain, ...
146-473 1.48e-68

Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup; Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276820 [Multi-domain]  Cd Length: 325  Bit Score: 225.67  E-value: 1.48e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 146 ICVCVRKRPLNKQELAKKEIDVISIPskclllvhePKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFE 225
Cdd:cd01369    4 IKVVCRFRPLNELEVLQGSKSIVKFD---------PEDTVVIATSETGKTFSFDRVFDPNTTQEDVYNFAAKPIVDDVLN 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 226 GGKATCFAYGQTGSGKTHTMGGdlsGKAQNASKGIYAMASRDVF--LLKNQpcyRKLGLEVYVTFFEIYNGKLFDLLN-K 302
Cdd:cd01369   75 GYNGTIFAYGQTSSGKTYTMEG---KLGDPESMGIIPRIVQDIFetIYSMD---ENLEFHVKVSYFEIYMEKIRDLLDvS 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 303 KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGR-----MHGKFSL 377
Cdd:cd01369  149 KTNLSVHEDKNRGPYVKGATERFVSSPEEVLDVIDEGKSNRHVAVTNMNEESSRSHSIFLINVKQENVetekkKSGKLYL 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 378 VDLAGNERgADTSSADRQTRMEGAEINKSLLALKECIRALGQ-NKAHTPFRESKLTQVLRDSfIGENSRTCMIATISPGI 456
Cdd:cd01369  229 VDLAGSEK-VSKTGAEGAVLDEAKKINKSLSALGNVINALTDgKKTHIPYRDSKLTRILQDS-LGGNSRTTLIICCSPSS 306
                        330
                 ....*....|....*..
gi 663071035 457 SSCEYTLNTLRYADRVK 473
Cdd:cd01369  307 YNESETLSTLRFGQRAK 323
KIP1 COG5059
Kinesin-like protein [Cytoskeleton];
148-574 3.12e-62

Kinesin-like protein [Cytoskeleton];


Pssm-ID: 227392 [Multi-domain]  Cd Length: 568  Bit Score: 215.76  E-value: 3.12e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 148 VCVRKRPLNKQELAKKEIDVISIPSK--CLLLVHEPKLKVDLTKYLENQaFCFDFAFDETASNEVVYRFTARPLVQTIFE 225
Cdd:COG5059    9 LKSRLSSRNEKSVSDIKSTIRIIPGElgERLINTSKKSHVSLEKSKEGT-YAFDKVFGPSATQEDVYEETIKPLIDSLLL 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 226 GGKATCFAYGQTGSGKTHTMGGDLSgkaqnaSKGIYAMASRDVFlLKNQPCYRKLGLEVYVTFFEIYNGKLFDLL-NKKA 304
Cdd:COG5059   88 GYNCTVFAYGQTGSGKTYTMSGTEE------EPGIIPLSLKELF-SKLEDLSMTKDFAVSISYLEIYNEKIYDLLsPNEE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 305 KLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRMHG-----KFSLVD 379
Cdd:COG5059  161 SLNIREDSLLGVKVAGLTEKHVSSKEEILDLLRKGEKNRTTASTEINDESSRSHSIFQIELASKNKVSGtsetsKLSLVD 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 380 LAGNERGADTssADRQTRM-EGAEINKSLLALKECIRALGQNK--AHTPFRESKLTQVLRDSfIGENSRTCMIATISPGI 456
Cdd:COG5059  241 LAGSERAART--GNRGTRLkEGASINKSLLTLGNVINALGDKKksGHIPYRESKLTRLLQDS-LGGNCNTRVICTISPSS 317
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 457 SSCEYTLNTLRYADRVKELSPHSGPSGEQLIQMETEEMEACSNGALIPGNLSKEEEELSSQMSSFNE--AMTQIRELEEK 534
Cdd:COG5059  318 NSFEETINTLKFASRAKSIKNKIQVNSSSDSSREIEEIKFDLSEDRSEIEILVFREQSQLSQSSLSGifAYMQSLKKETE 397
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 663071035 535 AMEE-----LKEIIQQGPDWLELSEMTEQpdyDLETFVNKAESAL 574
Cdd:COG5059  398 TLKSridliMKSIISGTFERKKLLKEEGW---KYKSTLQFLRIEI 439
KISc_KIF9_like cd01375
Kinesin motor domain, KIF9-like subgroup; Kinesin motor domain, KIF9-like subgroup; might play ...
150-473 4.68e-59

Kinesin motor domain, KIF9-like subgroup; Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276826 [Multi-domain]  Cd Length: 334  Bit Score: 200.88  E-value: 4.68e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 150 VRKRPLNKQELAKKEIDvisiPSKCLLLVHEPKlkvDLTK-YLENQAFCFDFAFD---ETASNEVVYRFTARPLVQTIFE 225
Cdd:cd01375    6 VRVRPTDDFAHEMIKYG----EDGKSISIHLKK---DLRRgVVNNQQEDWSFKFDgvlHNASQELVYETVAKDVVSSALA 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 226 GGKATCFAYGQTGSGKTHTMGGdlsGKAQNASKGIYAMASRDVF-LLKNQPCYrklGLEVYVTFFEIYNGKLFDLLNKK- 303
Cdd:cd01375   79 GYNGTIFAYGQTGAGKTFTMTG---GTENYKHRGIIPRALQQVFrMIEERPTK---AYTVHVSYLEIYNEQLYDLLSTLp 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 304 ------AKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGR------- 370
Cdd:cd01375  153 yvgpsvTPMTILEDSPQNIFIKGLSLHLTSQEEEALSLLFLGETNRIIASHTMNKNSSRSHCIFTIHLEAHSRtlsseky 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 371 MHGKFSLVDLAGNERGADTSSADrQTRMEGAEINKSLLALKECIRALG-QNKAHTPFRESKLTQVLRDSfIGENSRTCMI 449
Cdd:cd01375  233 ITSKLNLVDLAGSERLSKTGVEG-QVLKEATYINKSLSFLEQAIIALSdKDRTHVPFRQSKLTHVLRDS-LGGNCNTVMV 310
                        330       340
                 ....*....|....*....|....
gi 663071035 450 ATISPGISSCEYTLNTLRYADRVK 473
Cdd:cd01375  311 ANIYGEAAQLEETLSTLRFASRVK 334
KISc_KIF23_like cd01368
Kinesin motor domain, KIF23-like subgroup; Kinesin motor domain, KIF23-like subgroup. Members ...
148-469 2.69e-55

Kinesin motor domain, KIF23-like subgroup; Kinesin motor domain, KIF23-like subgroup. Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276819 [Multi-domain]  Cd Length: 345  Bit Score: 191.07  E-value: 2.69e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 148 VCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPK-----LKVDLTKYLENQaFCFDFAFDETASNEVVYRFTARPLVQT 222
Cdd:cd01368    5 VYLRVRPLSKDELESEDEGCIEVINSTTVVLHPPKgsaanKSERNGGQKETK-FSFSKVFGPNTTQKEFFQGTALPLVQD 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 223 IFEGGKATCFAYGQTGSGKTHTMGGDLSGkaqnasKGIYAMaSRDVfLLKNQPCYrklglEVYVTFFEIYNGKLFDLLN- 301
Cdd:cd01368   84 LLHGKNGLLFTYGVTNSGKTYTMQGSPGD------GGILPR-SLDV-IFNSIGGY-----SVFVSYIEIYNEYIYDLLEp 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 302 -------KKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQI-ILRAKGRMHG 373
Cdd:cd01368  151 spssptkKRQSLRLREDHNGNMYVAGLTEIEVKSTEEARKVLKRGQKNRSVAGTKLNRESSRSHSVFTIkLVQAPGDSDG 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 374 ------------KFSLVDLAGNERGADTSSADRQTRmEGAEINKSLLALKECIRALGQN-----KAHTPFRESKLTQVLR 436
Cdd:cd01368  231 dvdqdkdqitvsQLSLVDLAGSERTSRTQNTGERLK-EAGNINTSLMTLGTCIEVLRENqlqgtNKMVPFRDSKLTHLFQ 309
                        330       340       350
                 ....*....|....*....|....*....|...
gi 663071035 437 DSFIGEnSRTCMIATISPGISSCEYTLNTLRYA 469
Cdd:cd01368  310 NYFDGE-GKASMIVNVNPCASDYDETLHVMKFS 341
KISc_KID_like cd01376
Kinesin motor domain, KIF22/Kid-like subgroup; Kinesin motor domain, KIF22/Kid-like subgroup. ...
145-473 5.30e-55

Kinesin motor domain, KIF22/Kid-like subgroup; Kinesin motor domain, KIF22/Kid-like subgroup. Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276827 [Multi-domain]  Cd Length: 319  Bit Score: 189.25  E-value: 5.30e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 145 RICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPklkvdlTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIF 224
Cdd:cd01376    1 NVRVAVRVRPFVDGTAGASDPSCVSGIDSCSVELADP------RNHGETLKYQFDAFYGEESTQEDIYAREVQPIVPHLL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 225 EGGKATCFAYGQTGSGKTHTMGGDlsgkaqNASKGIYAMASRDVFLLKNQPCYRklgLEVYVTFFEIYNGKLFDLLN-KK 303
Cdd:cd01376   75 EGQNATVFAYGSTGAGKTFTMLGS------PEQPGLMPLTVMDLLQMTRKEAWA---LSFTMSYLEIYQEKILDLLEpAS 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 304 AKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRM------HGKFSL 377
Cdd:cd01376  146 KELVIREDKDGNILIPGLSSKPIKSMAEFEEAFLPASKNRTVAATRLNDNSSRSHAVLLIKVDQRERLapfrqrTGKLNL 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 378 VDLAGNERGADTSsaDRQTRM-EGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSfIGENSRTCMIATISPGI 456
Cdd:cd01376  226 IDLAGSEDNRRTG--NEGIRLkESGAINSSLFVLSKVVNALNKNLPRIPYRDSKLTRLLQDS-LGGGSRCIMVANIAPER 302
                        330
                 ....*....|....*..
gi 663071035 457 SSCEYTLNTLRYADRVK 473
Cdd:cd01376  303 TFYQDTLSTLNFAARSR 319
KISc_KLP2_like cd01373
Kinesin motor domain, KIF15-like subgroup; Kinesin motor domain, KIF15-like subgroup. Members ...
144-473 3.65e-54

Kinesin motor domain, KIF15-like subgroup; Kinesin motor domain, KIF15-like subgroup. Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward.


Pssm-ID: 276824 [Multi-domain]  Cd Length: 347  Bit Score: 188.10  E-value: 3.65e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 144 HRICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVdltkylenqaFCFDFAFDETASNEVVYRFTARPLVQTI 223
Cdd:cd01373    1 DAVKVFVRIRPPAEREGDGEYGQCLKKLSSDTLVLHSKPPKT----------FTFDHVADSNTNQESVFQSVGKPIVESC 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 224 FEGGKATCFAYGQTGSGKTHTMGGDlSGKAQNASKGIYAMASRD----VFLLKNQPCYRKLGLEVYV--TFFEIYNGKLF 297
Cdd:cd01373   71 LSGYNGTIFAYGQTGSGKTYTMWGP-SESDNESPHGLRGVIPRIfeylFSLIQREKEKAGEGKSFLCkcSFLEIYNEQIY 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 298 DLLNK-KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRMHG--- 373
Cdd:cd01373  150 DLLDPaSRNLKLREDIKKGVYVENLVEEYVTSAEDVYQVLSKGWSNRKVAATSMNRESSRSHAVFTCTIESWEKKACfvn 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 374 ----KFSLVDLAGNERGADTsSADRQTRMEGAEINKSLLALKECIRALGQN----KAHTPFRESKLTQVLRDSfIGENSR 445
Cdd:cd01373  230 irtsRLNLVDLAGSERQKDT-HAEGVRLKEAGNINKSLSCLGHVINALVDVahgkQRHVCYRDSKLTFLLRDS-LGGNAK 307
                        330       340
                 ....*....|....*....|....*...
gi 663071035 446 TCMIATISPGISSCEYTLNTLRYADRVK 473
Cdd:cd01373  308 TAIIANVHPSSKCFGETLSTLRFAQRAK 335
PLN03188 PLN03188
kinesin-12 family protein; Provisional
148-473 2.80e-36

kinesin-12 family protein; Provisional


Pssm-ID: 215621 [Multi-domain]  Cd Length: 1320  Bit Score: 145.85  E-value: 2.80e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  148 VCVRKRPLNKQELAKKEIDVISIPSKCLLlvhepklkvdltkyleNQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGG 227
Cdd:PLN03188  102 VIVRMKPLNKGEEGEMIVQKMSNDSLTIN----------------GQTFTFDSIADPESTQEDIFQLVGAPLVENCLAGF 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  228 KATCFAYGQTGSGKTHTMGG--------DLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDL 299
Cdd:PLN03188  166 NSSVFAYGQTGSGKTYTMWGpanglleeHLSGDQQGLTPRVFERLFARINEEQIKHADRQLKYQCRCSFLEIYNEQITDL 245
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  300 LNKKAK-LRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIIL--RAKGRMHG--- 373
Cdd:PLN03188  246 LDPSQKnLQIREDVKSGVYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVesRCKSVADGlss 325
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  374 ----KFSLVDLAGNERGADTSSADRQTRmEGAEINKSLLALKECIRALGQ-----NKAHTPFRESKLTQVLRDSfIGENS 444
Cdd:PLN03188  326 fktsRINLVDLAGSERQKLTGAAGDRLK-EAGNINRSLSQLGNLINILAEisqtgKQRHIPYRDSRLTFLLQES-LGGNA 403
                         330       340
                  ....*....|....*....|....*....
gi 663071035  445 RTCMIATISPGISSCEYTLNTLRYADRVK 473
Cdd:PLN03188  404 KLAMVCAISPSQSCKSETFSTLRFAQRAK 432
Motor_domain cd01363
Myosin and Kinesin motor domain; Myosin and Kinesin motor domain. These ATPases belong to the ...
148-454 3.95e-11

Myosin and Kinesin motor domain; Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes. Some of the names do not match with what is given in the sequence list. This is because they are based on the current nomenclature by Kollmar/Sebe-Pedros.


Pssm-ID: 276814 [Multi-domain]  Cd Length: 170  Bit Score: 61.98  E-value: 3.95e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 148 VCVRKRPLNKQElakkeidvISIPSKCLLlvhepklkvdltkylenqafcFDFAFDETASNEVVYRfTARPLVQTIFEGG 227
Cdd:cd01363    1 VLVRVNPFKELP--------IYRDSKIIV---------------------FYRGFRRSESQPHVFA-IADPAYQSMLDGY 50
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 228 KATC-FAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMasrdvfllknqpcyrKLGLEVYVTffeiyngklfdllnkkakl 306
Cdd:cd01363   51 NNQSiFAYGESGAGKTETMKGVIPYLASVAFNGINKG---------------ETEGWVYLT------------------- 96
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035 307 rvledgkqqvqvvglqEHLVNSADDVIKMIDMGSACRTSgQTFANSNSSRSHACFQIilrakgrmhgkfsLVDLAGNERg 386
Cdd:cd01363   97 ----------------EITVTLEDQILQANPILEAFGNA-KTTRNENSSRFGKFIEI-------------LLDIAGFEI- 145
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 663071035 387 adtssadrqtrmegaeINKSLLALKECIRAlgqnkahtpfreskltqvlrdsfigenSRTCMIATISP 454
Cdd:cd01363  146 ----------------INESLNTLMNVLRA---------------------------TRPHFVRCISP 170
Microtub_bd pfam16796
Microtubule binding; This motor homology domain binds microtubules and lacks an ATP-binding ...
141-300 6.13e-08

Microtubule binding; This motor homology domain binds microtubules and lacks an ATP-binding site.


Pssm-ID: 465274 [Multi-domain]  Cd Length: 144  Bit Score: 51.84  E-value: 6.13e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  141 IEEHR--ICVCVRKRPLNKQELAkkeidvISIPSKCLLLVHEPKlkvdltkylENQAFCFDFAFDETASNEVVYRFTaRP 218
Cdd:pfam16796  15 IQELKgnIRVFARVRPELLSEAQ------IDYPDETSSDGKIGS---------KNKSFSFDRVFPPESEQEDVFQEI-SQ 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 663071035  219 LVQTIFEGGKATCFAYGQTGSGKTHTMGGdlsgkaqNASKGIYAMASRdvflLKNQPCYrklglEVYVTFFEIYNGKLFD 298
Cdd:pfam16796  79 LVQSCLDGYNVCIFAYGQTGSGSNDGMIP-------RAREQIFRFISS----LKKGWKY-----TIELQFVEIYNESSQD 142

                  ..
gi 663071035  299 LL 300
Cdd:pfam16796 143 LL 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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