|
Name |
Accession |
Description |
Interval |
E-value |
| CH_SF super family |
cl00030 |
calponin homology (CH) domain superfamily; CH domains are actin filament (F-actin) binding ... |
1-68 |
1.54e-49 |
|
calponin homology (CH) domain superfamily; CH domains are actin filament (F-actin) binding motifs, which may be present as a single copy or in tandem repeats (which increase binding affinity). They either function as autonomous actin binding motifs or serve a regulatory function. CH domains are found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, as well as proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
The actual alignment was detected with superfamily member cd21269:
Pssm-ID: 469584 Cd Length: 130 Bit Score: 167.71 E-value: 1.54e-49
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 734520321 1 MRKVPCKKDAASGSFFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGRIVSRYG 68
Cdd:cd21269 63 MRKVPCKKDAPSGSFFARDNTANFLSWCRAIGVDETYLFESEGLVLHKDPRQVCLCLLEIGRIVSRYG 130
|
|
| GAS2 |
pfam02187 |
Growth-Arrest-Specific Protein 2 Domain; The GAR2 domain is common in plakin family members ... |
109-177 |
2.29e-30 |
|
Growth-Arrest-Specific Protein 2 Domain; The GAR2 domain is common in plakin family members and Gas2 family members. The GAR domain comprises around 57 amino acids and has been shown to bind to microtubules.
:
Pssm-ID: 460480 Cd Length: 69 Bit Score: 113.46 E-value: 2.29e-30
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 734520321 109 LHEAVKHIAEDppCSCSHRFSIEYLSEGRYRLGD--KILFIRMLHgKHVMVRVGGGWDTLQGFLLKYDPCR 177
Cdd:pfam02187 1 LDDEVRRIVAQ--CTCPTKFPVEKVGEGKYRFGDsqKLVFVRILR-SHVMVRVGGGWDTLEEYLLKHDPCR 68
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
201-569 |
2.93e-04 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 2.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 201 PDSPARTPQP-----PEMNPLSAVNMFQKQNSKPSVPVSIPKSKEKQGRPPGALVP-------ASSLKGGNLGSMSVRSK 268
Cdd:PHA03247 2624 PDPPPPSPSPaanepDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPpqrprrrAARPTVGSLTSLADPPP 2703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 269 LPNSPAASSHPKLksskgitkkPQAPSNNASSSLASLNPVGKNTSSPALPRTAPCISESPRKCIS--------SPNTPKA 340
Cdd:PHA03247 2704 PPPTPEPAPHALV---------SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARppttagppAPAPPAA 2774
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 341 KVIPAQNSADLPE-STLLPNKCSGKTQPKYLKHNHISSRDNAVSHLAAHSNSSSKCPKLPKANIPVRPKPSFQSSAKMtk 419
Cdd:PHA03247 2775 PAAGPPRRLTRPAvASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL-- 2852
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 420 tsSKTIATGLGTQSQPSDGAPQAKP-VPAQKLKSALNLNQPVSVSSVSPVKATQKSKDKNIVSATKKQPQNKSAFQKTGP 498
Cdd:PHA03247 2853 --GGSVAPGGDVRRRPPSRSPAAKPaAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQ 2930
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 734520321 499 SSLKSPGRTPlsivSLPQSSTKTQTAPKSAQTVAKSQHSTKGPPRSGKTPASIRKPPSSVKDADSGDKKPT 569
Cdd:PHA03247 2931 PPPPPPPRPQ----PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CH_GAS2L3 |
cd21269 |
calponin homology (CH) domain found in growth arrest-specific protein 2-like 3; Growth ... |
1-68 |
1.54e-49 |
|
calponin homology (CH) domain found in growth arrest-specific protein 2-like 3; Growth arrest-specific protein 2-like 3 (GAS2L3), also called GAS2-like protein 3, is a cytoskeletal linker protein that may promote and stabilize the formation of the actin and microtubule network. It contains a single copy of the CH domain at the N-terminus. CH domains are actin filament (F-actin) binding motifs.
Pssm-ID: 409118 Cd Length: 130 Bit Score: 167.71 E-value: 1.54e-49
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 734520321 1 MRKVPCKKDAASGSFFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGRIVSRYG 68
Cdd:cd21269 63 MRKVPCKKDAPSGSFFARDNTANFLSWCRAIGVDETYLFESEGLVLHKDPRQVCLCLLEIGRIVSRYG 130
|
|
| GAS2 |
pfam02187 |
Growth-Arrest-Specific Protein 2 Domain; The GAR2 domain is common in plakin family members ... |
109-177 |
2.29e-30 |
|
Growth-Arrest-Specific Protein 2 Domain; The GAR2 domain is common in plakin family members and Gas2 family members. The GAR domain comprises around 57 amino acids and has been shown to bind to microtubules.
Pssm-ID: 460480 Cd Length: 69 Bit Score: 113.46 E-value: 2.29e-30
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 734520321 109 LHEAVKHIAEDppCSCSHRFSIEYLSEGRYRLGD--KILFIRMLHgKHVMVRVGGGWDTLQGFLLKYDPCR 177
Cdd:pfam02187 1 LDDEVRRIVAQ--CTCPTKFPVEKVGEGKYRFGDsqKLVFVRILR-SHVMVRVGGGWDTLEEYLLKHDPCR 68
|
|
| GAS2 |
smart00243 |
Growth-Arrest-Specific Protein 2 Domain; GROWTH-ARREST-SPECIFIC PROTEIN 2 Domain |
107-180 |
4.78e-28 |
|
Growth-Arrest-Specific Protein 2 Domain; GROWTH-ARREST-SPECIFIC PROTEIN 2 Domain
Pssm-ID: 128539 Cd Length: 73 Bit Score: 107.15 E-value: 4.78e-28
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 734520321 107 EELHEAVKHIAEDppCSCSHRFSIEYLSEGRYRLGD-KILFIRMLHGKHVMVRVGGGWDTLQGFLLKYDPCRILQ 180
Cdd:smart00243 1 DKIDDEVKRIVED--CKCPTKFQVEKISEGKYRFGDsQILRLVRILRSTVMVRVGGGWETLDEYLLKHDPCRAKG 73
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
201-569 |
2.93e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 2.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 201 PDSPARTPQP-----PEMNPLSAVNMFQKQNSKPSVPVSIPKSKEKQGRPPGALVP-------ASSLKGGNLGSMSVRSK 268
Cdd:PHA03247 2624 PDPPPPSPSPaanepDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPpqrprrrAARPTVGSLTSLADPPP 2703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 269 LPNSPAASSHPKLksskgitkkPQAPSNNASSSLASLNPVGKNTSSPALPRTAPCISESPRKCIS--------SPNTPKA 340
Cdd:PHA03247 2704 PPPTPEPAPHALV---------SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARppttagppAPAPPAA 2774
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 341 KVIPAQNSADLPE-STLLPNKCSGKTQPKYLKHNHISSRDNAVSHLAAHSNSSSKCPKLPKANIPVRPKPSFQSSAKMtk 419
Cdd:PHA03247 2775 PAAGPPRRLTRPAvASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL-- 2852
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 420 tsSKTIATGLGTQSQPSDGAPQAKP-VPAQKLKSALNLNQPVSVSSVSPVKATQKSKDKNIVSATKKQPQNKSAFQKTGP 498
Cdd:PHA03247 2853 --GGSVAPGGDVRRRPPSRSPAAKPaAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQ 2930
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 734520321 499 SSLKSPGRTPlsivSLPQSSTKTQTAPKSAQTVAKSQHSTKGPPRSGKTPASIRKPPSSVKDADSGDKKPT 569
Cdd:PHA03247 2931 PPPPPPPRPQ----PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
205-589 |
8.69e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.21 E-value: 8.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 205 ARTPQPPEMNPLSAVNMFQKQNSKPSVPVS--IPKSKEKQGRPPGALVPASSLKGGNLGSMSVRSKLPNSPAA------S 276
Cdd:pfam05109 422 SKAPESTTTSPTLNTTGFAAPNTTTGLPSSthVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPrdngteS 501
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 277 SHPKLKSSKGITKKPQAPSNNASSSLASLNPvgkNTSSPALPRTAPCI--------SESPRKCISSPnTPKAkVIP--AQ 346
Cdd:pfam05109 502 KAPDMTSPTSAVTTPTPNATSPTPAVTTPTP---NATSPTLGKTSPTSavttptpnATSPTPAVTTP-TPNA-TIPtlGK 576
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 347 NSADLPESTLLPNKCS---GKTQPKylkhnhissrDNAVSHLAAHSNSSskcpklPKANIPVRPKPSFQSSAKMTKTSSK 423
Cdd:pfam05109 577 TSPTSAVTTPTPNATSptvGETSPQ----------ANTTNHTLGGTSST------PVVTSPPKNATSAVTTGQHNITSSS 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 424 TIATGLgtqsQPSDGAPQAKPVPAQKLKSALN-LNQPVSVSSVSPVKATQKSKDKNIVSATKKQPQNKSAFQKTGP---S 499
Cdd:pfam05109 641 TSSMSL----RPSSISETLSPSTSDNSTSHMPlLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPgnsS 716
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 500 SLKSPGRTPLSIVSLPQSSTKTQtAPKSAQTVAKSQHSTKGPPRS---GKTPASIRKPPSSVKDADSGDKKPTAKKKEDD 576
Cdd:pfam05109 717 TSTKPGEVNVTKGTPPKNATSPQ-APSGQKTAVPTVTSTGGKANSttgGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNA 795
|
410
....*....|...
gi 734520321 577 DHYFVMTGSKKPR 589
Cdd:pfam05109 796 TTYLPPSTSSKLR 808
|
|
| SCP1 |
COG5199 |
Calponin [Cytoskeleton]; |
15-62 |
4.45e-03 |
|
Calponin [Cytoskeleton];
Pssm-ID: 227526 [Multi-domain] Cd Length: 178 Bit Score: 38.36 E-value: 4.45e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 734520321 15 FFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGR 62
Cdd:COG5199 67 FVQMENISSFINGLKKLRVPEYELFQTNDLFEAKDLRQVVICLYSLSR 114
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CH_GAS2L3 |
cd21269 |
calponin homology (CH) domain found in growth arrest-specific protein 2-like 3; Growth ... |
1-68 |
1.54e-49 |
|
calponin homology (CH) domain found in growth arrest-specific protein 2-like 3; Growth arrest-specific protein 2-like 3 (GAS2L3), also called GAS2-like protein 3, is a cytoskeletal linker protein that may promote and stabilize the formation of the actin and microtubule network. It contains a single copy of the CH domain at the N-terminus. CH domains are actin filament (F-actin) binding motifs.
Pssm-ID: 409118 Cd Length: 130 Bit Score: 167.71 E-value: 1.54e-49
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 734520321 1 MRKVPCKKDAASGSFFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGRIVSRYG 68
Cdd:cd21269 63 MRKVPCKKDAPSGSFFARDNTANFLSWCRAIGVDETYLFESEGLVLHKDPRQVCLCLLEIGRIVSRYG 130
|
|
| CH_GAS2 |
cd21267 |
calponin homology (CH) domain found in growth arrest-specific protein 2; Growth ... |
2-71 |
1.58e-39 |
|
calponin homology (CH) domain found in growth arrest-specific protein 2; Growth arrest-specific protein 2 (GAS-2) may play a role in apoptosis by acting as a cell death substrate for caspases. It contains a single copy of the CH domain at the N-terminal region. CH domains are actin filament (F-actin) binding motifs.
Pssm-ID: 409116 Cd Length: 136 Bit Score: 141.23 E-value: 1.58e-39
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 2 RKVPCKKDAASGSFFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGRIVSRYGVEP 71
Cdd:cd21267 67 RKIPCRANAPSGSFFARDNTANFLSWCRDVGVGDTCLFESEGLVLHKQPREVCLCLLELGRIAARFGVEP 136
|
|
| CH_GAS2-like |
cd21204 |
calponin homology (CH) domain found in the growth arrest-specific protein 2 family; The growth ... |
1-68 |
1.79e-37 |
|
calponin homology (CH) domain found in the growth arrest-specific protein 2 family; The growth arrest-specific protein 2 (GAS-2) family includes GAS-2, and GAS-2 like proteins, GAS2L1-3. GAS-2 may play a role in apoptosis by acting as a cell death substrate for caspases. GAS2L1 (also called GAS2-related protein on chromosome 22 or growth arrest-specific protein 2-like 1) and GAS2L2 (also called GAS2-related protein on chromosome 17 or growth arrest-specific protein 2-like 2) may be involved in the cross-linking of microtubules and microfilaments. GAS2L3, also called GAS2-like protein 3, is a cytoskeletal linker protein that may promote and stabilize the formation of the actin and microtubule network. Members of this family contain a single copy of the CH domain at the N-terminal region. CH domains are actin filament (F-actin) binding motifs.
Pssm-ID: 409053 Cd Length: 131 Bit Score: 135.09 E-value: 1.79e-37
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 734520321 1 MRKVPCKKDAASGSFFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGRIVSRYG 68
Cdd:cd21204 64 SYKLKCNENAKPGSFFARDNVANFLRWCRKLGVDEVLLFESEDLVLHKNPRQVLLCLLELARIAARYG 131
|
|
| GAS2 |
pfam02187 |
Growth-Arrest-Specific Protein 2 Domain; The GAR2 domain is common in plakin family members ... |
109-177 |
2.29e-30 |
|
Growth-Arrest-Specific Protein 2 Domain; The GAR2 domain is common in plakin family members and Gas2 family members. The GAR domain comprises around 57 amino acids and has been shown to bind to microtubules.
Pssm-ID: 460480 Cd Length: 69 Bit Score: 113.46 E-value: 2.29e-30
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 734520321 109 LHEAVKHIAEDppCSCSHRFSIEYLSEGRYRLGD--KILFIRMLHgKHVMVRVGGGWDTLQGFLLKYDPCR 177
Cdd:pfam02187 1 LDDEVRRIVAQ--CTCPTKFPVEKVGEGKYRFGDsqKLVFVRILR-SHVMVRVGGGWDTLEEYLLKHDPCR 68
|
|
| GAS2 |
smart00243 |
Growth-Arrest-Specific Protein 2 Domain; GROWTH-ARREST-SPECIFIC PROTEIN 2 Domain |
107-180 |
4.78e-28 |
|
Growth-Arrest-Specific Protein 2 Domain; GROWTH-ARREST-SPECIFIC PROTEIN 2 Domain
Pssm-ID: 128539 Cd Length: 73 Bit Score: 107.15 E-value: 4.78e-28
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 734520321 107 EELHEAVKHIAEDppCSCSHRFSIEYLSEGRYRLGD-KILFIRMLHGKHVMVRVGGGWDTLQGFLLKYDPCRILQ 180
Cdd:smart00243 1 DKIDDEVKRIVED--CKCPTKFQVEKISEGKYRFGDsQILRLVRILRSTVMVRVGGGWETLDEYLLKHDPCRAKG 73
|
|
| CH_GAS2L1_2 |
cd21268 |
calponin homology (CH) domain found in GAS2-like protein 1 (GAS2L1), GAS2L2, and similar ... |
1-69 |
2.30e-20 |
|
calponin homology (CH) domain found in GAS2-like protein 1 (GAS2L1), GAS2L2, and similar proteins; This subfamily includes GAS2L1 (also called GAS2-related protein on chromosome 22 or growth arrest-specific protein 2-like 1) and GAS2L2 (also called GAS2-related protein on chromosome 17 or growth arrest-specific protein 2-like 2). They may be involved in the cross-linking of microtubules and microfilaments. Members of this subfamily contain a single copy of the CH domain at the N-terminus. CH domains are actin filament (F-actin) binding motifs.
Pssm-ID: 409117 Cd Length: 142 Bit Score: 87.76 E-value: 2.30e-20
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 1 MRKVPCKKDAASGSFFARDNTANFLHWCR-DIGVDETYLFESEGLVLHKDPRQVYLCLLEIGRIVSRYGV 69
Cdd:cd21268 73 REVIFYRPSAKPGSFQARDNVSNFINWCRqLLGIPEVLLFETDDLVLRKNEKNFVLCLLEVARRGAKFGM 142
|
|
| CH_SF |
cd00014 |
calponin homology (CH) domain superfamily; CH domains are actin filament (F-actin) binding ... |
2-62 |
2.79e-10 |
|
calponin homology (CH) domain superfamily; CH domains are actin filament (F-actin) binding motifs, which may be present as a single copy or in tandem repeats (which increase binding affinity). They either function as autonomous actin binding motifs or serve a regulatory function. CH domains are found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, as well as proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Pssm-ID: 409031 [Multi-domain] Cd Length: 103 Bit Score: 57.35 E-value: 2.79e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 734520321 2 RKVPCKKDAASGSFFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGR 62
Cdd:cd00014 43 GSIPKINKKPKSPFKKRENINLFLNACKKLGLPELDLFEPEDLYEKGNLKKVLGTLWALAL 103
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
201-569 |
2.93e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 2.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 201 PDSPARTPQP-----PEMNPLSAVNMFQKQNSKPSVPVSIPKSKEKQGRPPGALVP-------ASSLKGGNLGSMSVRSK 268
Cdd:PHA03247 2624 PDPPPPSPSPaanepDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPpqrprrrAARPTVGSLTSLADPPP 2703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 269 LPNSPAASSHPKLksskgitkkPQAPSNNASSSLASLNPVGKNTSSPALPRTAPCISESPRKCIS--------SPNTPKA 340
Cdd:PHA03247 2704 PPPTPEPAPHALV---------SATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARppttagppAPAPPAA 2774
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 341 KVIPAQNSADLPE-STLLPNKCSGKTQPKYLKHNHISSRDNAVSHLAAHSNSSSKCPKLPKANIPVRPKPSFQSSAKMtk 419
Cdd:PHA03247 2775 PAAGPPRRLTRPAvASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL-- 2852
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 420 tsSKTIATGLGTQSQPSDGAPQAKP-VPAQKLKSALNLNQPVSVSSVSPVKATQKSKDKNIVSATKKQPQNKSAFQKTGP 498
Cdd:PHA03247 2853 --GGSVAPGGDVRRRPPSRSPAAKPaAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQ 2930
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 734520321 499 SSLKSPGRTPlsivSLPQSSTKTQTAPKSAQTVAKSQHSTKGPPRSGKTPASIRKPPSSVKDADSGDKKPT 569
Cdd:PHA03247 2931 PPPPPPPRPQ----PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997
|
|
| CH_SCP1-like |
cd21210 |
calponin homology (CH) domain found in Saccharomyces cerevisiae transgelin (SCP1) and similar ... |
15-62 |
3.64e-04 |
|
calponin homology (CH) domain found in Saccharomyces cerevisiae transgelin (SCP1) and similar proteins; The family includes transgelins from Saccharomyces cerevisiae and Schizosaccharomyces pombe, which are also called SCP1 and STG1, respectively. Transgelin, also called calponin homolog 1, has actin-binding and actin-bundling activity. It stabilizes actin filaments against disassembly. Transgelin contains a single copy of the CH domain. CH domains are actin filament (F-actin) binding motifs.
Pssm-ID: 409059 [Multi-domain] Cd Length: 101 Bit Score: 40.04 E-value: 3.64e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 734520321 15 FFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGR 62
Cdd:cd21210 54 FVQMENISAFLNAARKLGVPENDLFQTVDLFERKNPAQVLQCLHALSR 101
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
412-590 |
3.92e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.50 E-value: 3.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 412 QSSAKMTKTSSKTIAtglgtQSQPSDGAPQAKPVPAQKLKSALNLNQPVSVSSVSPVKATQKSKDKNIVSATKKQPQNKS 491
Cdd:PTZ00108 1156 QRLKSKTKGKASKLR-----KPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEE 1230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 492 AFQKTGPSSLKSPGRTPLSIVSLPQSST-----------KTQTAPKSAQTVAKSQHSTKGPPRSGKTPASIRKPPSSVKD 560
Cdd:PTZ00108 1231 QKTKPKKSSVKRLKSKKNNSSKSSEDNDefssddlskegKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKV 1310
|
170 180 190
....*....|....*....|....*....|
gi 734520321 561 ADSGDKKPTAKKKedddhyfvmtgSKKPRK 590
Cdd:PTZ00108 1311 KKRLEGSLAALKK-----------KKKSEK 1329
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
205-589 |
8.69e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.21 E-value: 8.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 205 ARTPQPPEMNPLSAVNMFQKQNSKPSVPVS--IPKSKEKQGRPPGALVPASSLKGGNLGSMSVRSKLPNSPAA------S 276
Cdd:pfam05109 422 SKAPESTTTSPTLNTTGFAAPNTTTGLPSSthVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPrdngteS 501
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 277 SHPKLKSSKGITKKPQAPSNNASSSLASLNPvgkNTSSPALPRTAPCI--------SESPRKCISSPnTPKAkVIP--AQ 346
Cdd:pfam05109 502 KAPDMTSPTSAVTTPTPNATSPTPAVTTPTP---NATSPTLGKTSPTSavttptpnATSPTPAVTTP-TPNA-TIPtlGK 576
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 347 NSADLPESTLLPNKCS---GKTQPKylkhnhissrDNAVSHLAAHSNSSskcpklPKANIPVRPKPSFQSSAKMTKTSSK 423
Cdd:pfam05109 577 TSPTSAVTTPTPNATSptvGETSPQ----------ANTTNHTLGGTSST------PVVTSPPKNATSAVTTGQHNITSSS 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 424 TIATGLgtqsQPSDGAPQAKPVPAQKLKSALN-LNQPVSVSSVSPVKATQKSKDKNIVSATKKQPQNKSAFQKTGP---S 499
Cdd:pfam05109 641 TSSMSL----RPSSISETLSPSTSDNSTSHMPlLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPgnsS 716
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 734520321 500 SLKSPGRTPLSIVSLPQSSTKTQtAPKSAQTVAKSQHSTKGPPRS---GKTPASIRKPPSSVKDADSGDKKPTAKKKEDD 576
Cdd:pfam05109 717 TSTKPGEVNVTKGTPPKNATSPQ-APSGQKTAVPTVTSTGGKANSttgGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNA 795
|
410
....*....|...
gi 734520321 577 DHYFVMTGSKKPR 589
Cdd:pfam05109 796 TTYLPPSTSSKLR 808
|
|
| CH_dMP20-like |
cd21207 |
calponin homology (CH) domain found in Drosophila melanogaster muscle-specific protein 20 ... |
7-62 |
9.09e-04 |
|
calponin homology (CH) domain found in Drosophila melanogaster muscle-specific protein 20 (dMP20) and similar domains; This subfamily contains Drosophila melanogaster muscle-specific protein 20 (dMP20), Echinococcus granulosus myophilin, Dictyostelium discoideum Rac guanine nucleotide exchange factor B (also called Trix), and similar proteins. dMP20 is present only in the synchronous muscles of D. melanogaster. It may be involved in the system linking the nerve impulse with the contraction or the relaxation process. Trix is involved in the regulation of the late steps of the endocytic pathway. dMP20 contains a single copy of the CH domain, while Trix (triple CH-domain array exchange factor) contains three, two type 3 CH domains which are included in this model, and one type 1 CH domain that is not included in this subfamily, but is part of the superfamily. CH domains are actin filament (F-actin) binding motifs.
Pssm-ID: 409056 [Multi-domain] Cd Length: 107 Bit Score: 39.22 E-value: 9.09e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 734520321 7 KKDAASGSFFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGR 62
Cdd:cd21207 52 KINTSKMAFKLMENIENFLTACKGYGVPKTDLFQTVDLYEKKNIPQVTNCLFALGR 107
|
|
| SCP1 |
COG5199 |
Calponin [Cytoskeleton]; |
15-62 |
4.45e-03 |
|
Calponin [Cytoskeleton];
Pssm-ID: 227526 [Multi-domain] Cd Length: 178 Bit Score: 38.36 E-value: 4.45e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 734520321 15 FFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGR 62
Cdd:COG5199 67 FVQMENISSFINGLKKLRVPEYELFQTNDLFEAKDLRQVVICLYSLSR 114
|
|
| |
