|
Name |
Accession |
Description |
Interval |
E-value |
| CH_2 |
pfam06294 |
CH-like domain in sperm protein; Spef is a region of sperm flagellar proteins. It probably ... |
5-97 |
2.38e-24 |
|
CH-like domain in sperm protein; Spef is a region of sperm flagellar proteins. It probably exerts a role in spermatogenesis in that the protein is expressed predominantly in adult tissue. It is present in the tails of developing and epididymal sperm internal to the fibrous sheath and around the dense outer fibres of the sperm flagellum. The amino-terminal domain (residues 1-110) shows a possible calponin homology (CH) domain; however Spef does not bind actin directly under in vitro conditions, so the function of the amino-terminal calponin-like domain is unclear. Transcription aberrations leading to a truncated protein result in immotile sperm.
:
Pssm-ID: 461871 Cd Length: 91 Bit Score: 98.66 E-value: 2.38e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 5 LCQWLnQELRVSRTVspKSFAKAFSNGYLIGEVLFKFELQS-DFAEFSESRGSTAKLNNFSRLQPTLHLLGLQFDQNVAQ 83
Cdd:pfam06294 1 LLKWL-QSLDLSRPV--RNIARDFSDGFLVAEILSRYYPKLvDLHNYSPGSSVAAKLNNWETLEKVLKKLGIKLSKEDIE 77
|
90
....*....|....
gi 758170212 84 SIITEKPGAATKLL 97
Cdd:pfam06294 78 DLANGKPGAAERLL 91
|
|
| NK super family |
cl17190 |
Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of ... |
673-857 |
2.19e-13 |
|
Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars. Members of this family play a wide variety of essential roles in nucleotide metabolism, the biosynthesis of coenzymes and aromatic compounds, as well as the metabolism of sugar and sulfate.
The actual alignment was detected with superfamily member cd01428:
Pssm-ID: 450170 [Multi-domain] Cd Length: 194 Bit Score: 70.73 E-value: 2.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 673 RAQLGAKSEL------MLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRkflqlkkkke 746
Cdd:cd01428 35 REEIASGTELgkkakeYIDSGKLVPDEIVIKLLKERLKKPDCKKGFILDGFPRTVDQAEALDELLDEGIK---------- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 747 qmptlaldpststevsllpsaLDFVILLDISDNSS----LARTNDIIAKEISHEISHENVGRPGTGTSQDNKSEdrnlrd 822
Cdd:cd01428 105 ---------------------PDKVIELDVPDEVLieriLGRRICPVSGRVYHLGKDDVTGEPLSQRSDDNEET------ 157
|
170 180 190
....*....|....*....|....*....|....*.
gi 758170212 823 hIQHRIVGFLDN-WPLLEewFTQPKNILTKVNAEID 857
Cdd:cd01428 158 -IKKRLEVYKEQtAPLID--YYKKKGKLVEIDGSGD 190
|
|
| DUF5401 super family |
cl38662 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
101-424 |
7.50e-09 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
The actual alignment was detected with superfamily member pfam17380:
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 60.91 E-value: 7.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 101 YIALQKKKKTGLTGLEIQTMQPQTNLRL--QTLKSEAFRERLKNLIPRQTDFNLMRVTCRF----QEKCKQMKEDLARmn 174
Cdd:pfam17380 233 YEKMERRKESFNLAEDVTTMTPEYTVRYngQTMTENEFLNQLLHIVQHQKAVSERQQQEKFekmeQERLRQEKEEKAR-- 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 175 feKFEKIQKLEEEQ--RHFNIEKQRLNRRRQNEIMAKIQAAIIQIPKPESNRTLKAIEAQKL---MKKKKEAEDVANEIK 249
Cdd:pfam17380 311 --EVERRRKLEEAEkaRQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIameISRMRELERLQMERQ 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 250 KFEALIKKDLQIKESV---SKTSLETTDQTTAELLNTYSDDDYIKKIQ-KRLEEDafareqrekrrrrllMDQLMAHEAQ 325
Cdd:pfam17380 389 QKNERVRQELEAARKVkilEEERQRKIQQQKVEMEQIRAEQEEARQREvRRLEEE---------------RAREMERVRL 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 326 EEAYREEQlIHRLMRQSQQERRIAVQL-MHVRHEKEVLWQNRIFREKQFEERRLKDFQDAL----------DREAALAKQ 394
Cdd:pfam17380 454 EEQERQQQ-VERLRQQEEERKRKKLELeKEKRDRKRAEEQRRKILEKELEERKQAMIEEERkrkllekemeERQKAIYEE 532
|
330 340 350
....*....|....*....|....*....|.
gi 758170212 395 AKIDFAEQTLR-EKEIHEKisvERAQQRYKK 424
Cdd:pfam17380 533 ERRREAEEERRkQQEMEER---RRIQEQMRK 560
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CH_2 |
pfam06294 |
CH-like domain in sperm protein; Spef is a region of sperm flagellar proteins. It probably ... |
5-97 |
2.38e-24 |
|
CH-like domain in sperm protein; Spef is a region of sperm flagellar proteins. It probably exerts a role in spermatogenesis in that the protein is expressed predominantly in adult tissue. It is present in the tails of developing and epididymal sperm internal to the fibrous sheath and around the dense outer fibres of the sperm flagellum. The amino-terminal domain (residues 1-110) shows a possible calponin homology (CH) domain; however Spef does not bind actin directly under in vitro conditions, so the function of the amino-terminal calponin-like domain is unclear. Transcription aberrations leading to a truncated protein result in immotile sperm.
Pssm-ID: 461871 Cd Length: 91 Bit Score: 98.66 E-value: 2.38e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 5 LCQWLnQELRVSRTVspKSFAKAFSNGYLIGEVLFKFELQS-DFAEFSESRGSTAKLNNFSRLQPTLHLLGLQFDQNVAQ 83
Cdd:pfam06294 1 LLKWL-QSLDLSRPV--RNIARDFSDGFLVAEILSRYYPKLvDLHNYSPGSSVAAKLNNWETLEKVLKKLGIKLSKEDIE 77
|
90
....*....|....
gi 758170212 84 SIITEKPGAATKLL 97
Cdd:pfam06294 78 DLANGKPGAAERLL 91
|
|
| ADK |
cd01428 |
Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine ... |
673-857 |
2.19e-13 |
|
Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP). This enzyme is required for the biosynthesis of ADP and is essential for homeostasis of adenosine phosphates.
Pssm-ID: 238713 [Multi-domain] Cd Length: 194 Bit Score: 70.73 E-value: 2.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 673 RAQLGAKSEL------MLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRkflqlkkkke 746
Cdd:cd01428 35 REEIASGTELgkkakeYIDSGKLVPDEIVIKLLKERLKKPDCKKGFILDGFPRTVDQAEALDELLDEGIK---------- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 747 qmptlaldpststevsllpsaLDFVILLDISDNSS----LARTNDIIAKEISHEISHENVGRPGTGTSQDNKSEdrnlrd 822
Cdd:cd01428 105 ---------------------PDKVIELDVPDEVLieriLGRRICPVSGRVYHLGKDDVTGEPLSQRSDDNEET------ 157
|
170 180 190
....*....|....*....|....*....|....*.
gi 758170212 823 hIQHRIVGFLDN-WPLLEewFTQPKNILTKVNAEID 857
Cdd:cd01428 158 -IKKRLEVYKEQtAPLID--YYKKKGKLVEIDGSGD 190
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
101-424 |
7.50e-09 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 60.91 E-value: 7.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 101 YIALQKKKKTGLTGLEIQTMQPQTNLRL--QTLKSEAFRERLKNLIPRQTDFNLMRVTCRF----QEKCKQMKEDLARmn 174
Cdd:pfam17380 233 YEKMERRKESFNLAEDVTTMTPEYTVRYngQTMTENEFLNQLLHIVQHQKAVSERQQQEKFekmeQERLRQEKEEKAR-- 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 175 feKFEKIQKLEEEQ--RHFNIEKQRLNRRRQNEIMAKIQAAIIQIPKPESNRTLKAIEAQKL---MKKKKEAEDVANEIK 249
Cdd:pfam17380 311 --EVERRRKLEEAEkaRQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIameISRMRELERLQMERQ 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 250 KFEALIKKDLQIKESV---SKTSLETTDQTTAELLNTYSDDDYIKKIQ-KRLEEDafareqrekrrrrllMDQLMAHEAQ 325
Cdd:pfam17380 389 QKNERVRQELEAARKVkilEEERQRKIQQQKVEMEQIRAEQEEARQREvRRLEEE---------------RAREMERVRL 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 326 EEAYREEQlIHRLMRQSQQERRIAVQL-MHVRHEKEVLWQNRIFREKQFEERRLKDFQDAL----------DREAALAKQ 394
Cdd:pfam17380 454 EEQERQQQ-VERLRQQEEERKRKKLELeKEKRDRKRAEEQRRKILEKELEERKQAMIEEERkrkllekemeERQKAIYEE 532
|
330 340 350
....*....|....*....|....*....|.
gi 758170212 395 AKIDFAEQTLR-EKEIHEKisvERAQQRYKK 424
Cdd:pfam17380 533 ERRREAEEERRkQQEMEER---RRIQEQMRK 560
|
|
| Adk |
COG0563 |
Adenylate kinase or related kinase [Nucleotide transport and metabolism]; Adenylate kinase or ... |
672-858 |
6.84e-08 |
|
Adenylate kinase or related kinase [Nucleotide transport and metabolism]; Adenylate kinase or related kinase is part of the Pathway/BioSystem: Pyrimidine biosynthesis
Pssm-ID: 440329 [Multi-domain] Cd Length: 212 Bit Score: 54.75 E-value: 6.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 672 MRAQLGAKSEL------MLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRKflqlkkkk 745
Cdd:COG0563 35 LRAAVKAGTELgkkakeYMDAGELVPDEIVIGLVKERLAQPDCANGFILDGFPRTVAQAEALDELLAELGIK-------- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 746 eqmptlaldpststevsllpsaLDFVILLDISDNSSLARtndiiakeISHEISHENVGRPGTGTSQDNKSEDRNLRDH-- 823
Cdd:COG0563 107 ----------------------LDAVIELDVDDEELVER--------LSGRRVCPNCGATYHVKFNPPKVEGVCDKCGge 156
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 758170212 824 -----------IQHRIVGFLDN-WPLLEewFTQPKNILTKVNAE--IDE 858
Cdd:COG0563 157 lvqraddneetVRKRLEVYHEQtAPLID--YYRKKGKLVEIDGEgsIEE 203
|
|
| ADK |
pfam00406 |
Adenylate kinase; |
672-804 |
2.56e-06 |
|
Adenylate kinase;
Pssm-ID: 395329 [Multi-domain] Cd Length: 184 Bit Score: 49.61 E-value: 2.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 672 MRAQLGAKSEL------MLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRkflqlkkkk 745
Cdd:pfam00406 31 LRAEIKSGTELgkeakeYMDKGELVPDEVVVGLVKERLEQNDCKNGFLLDGFPRTVPQAEALEELLERGIK--------- 101
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 758170212 746 eqmptlaldpststevsllpsaLDFVILLDISDnsslartnDIIAKEISHEISHENVGR 804
Cdd:pfam00406 102 ----------------------LDYVIEFDVPD--------EVLVERLTGRRIHPNSGR 130
|
|
| adk |
PRK00279 |
adenylate kinase; Reviewed |
673-784 |
5.27e-05 |
|
adenylate kinase; Reviewed
Pssm-ID: 234711 [Multi-domain] Cd Length: 215 Bit Score: 46.30 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 673 RAQLGAKSELMLR------RGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRKflqlkkkke 746
Cdd:PRK00279 36 RAAVKAGTELGKEaksymdAGELVPDEIVIGLVKERLAQPDCKNGFLLDGFPRTIPQAEALDEMLKELGIK--------- 106
|
90 100 110
....*....|....*....|....*....|....*...
gi 758170212 747 qmptlaldpststevsllpsaLDFVILLDISDNSSLAR 784
Cdd:PRK00279 107 ---------------------LDAVIEIDVPDEELVER 123
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
158-431 |
2.18e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 158 RFQEKCKQMKEDLARMNFEKFEKIQKLE-----EEQRHFNIekqrlnrrRQNEIMAKIQAAIIQ--IPKPESNRTLKAIE 230
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKAEEKKKAEeakkaEEDKNMAL--------RKAEEAKKAEEARIEevMKLYEEEKKMKAEE 1611
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 231 AqklmKKKKEAEDVANEIKKFEALIKKDLQIKESvsktslETTDQTTAELLNTYSDDDYIKKIQ--KRLEEDAFAREQRE 308
Cdd:PTZ00121 1612 A----KKAEEAKIKAEELKKAEEEKKKVEQLKKK------EAEEKKKAEELKKAEEENKIKAAEeaKKAEEDKKKAEEAK 1681
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 309 KRRRRLLMDQLMAHEAQEEAYREEQLIHRL---------MRQSQQERRIAVQLMHvRHEKEVLWQNRIFREKQFEERRLK 379
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAKKAEELKKKEaeekkkaeeLKKAEEENKIKAEEAK-KEAEEDKKKAEEAKKDEEEKKKIA 1760
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 758170212 380 DFQDALDREAALAKQAKIDFAEQTLREKEIHEKISVERAQQRYKKHYGICAE 431
Cdd:PTZ00121 1761 HLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIE 1812
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
99-420 |
9.14e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.11 E-value: 9.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 99 QLYIALQKKKKTGLTGLEIQTMQPQ-----TNLRLQTL--KSEAFRERLKNLIPRQTDFNLMRVTCRFQEKCKQMKEDLA 171
Cdd:TIGR00618 180 QLALMEFAKKKSLHGKAELLTLRSQlltlcTPCMPDTYheRKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQ 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 172 RMNFEKFEKIQKLEEEQRHFNIEKQRLNRRRQNEIMAKIQAAIIQIPK--PESNRTLKAIEAQKlmkkkkeaedvANEIK 249
Cdd:TIGR00618 260 QLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQqaQRIHTELQSKMRSR-----------AKLLM 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 250 KFEALIKKDLQIKEsvsKTSLETTDQTTAELLNTYSDDDYIKKIQKRLEEDAFAREQREKRRRRLLMDQLMAHEAQEEAY 329
Cdd:TIGR00618 329 KRAAHVKQQSSIEE---QRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDIL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 330 REEQliHRLMRQSQQERRIAVQLMHVRH----EKEVLWQNRIFREKQF-----EERRLKDFQDALDREAALAKQAKIdFA 400
Cdd:TIGR00618 406 QREQ--ATIDTRTSAFRDLQGQLAHAKKqqelQQRYAELCAAAITCTAqceklEKIHLQESAQSLKEREQQLQTKEQ-IH 482
|
330 340
....*....|....*....|
gi 758170212 401 EQTLREKEIHEKISVERAQQ 420
Cdd:TIGR00618 483 LQETRKKAVVLARLLELQEE 502
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CH_2 |
pfam06294 |
CH-like domain in sperm protein; Spef is a region of sperm flagellar proteins. It probably ... |
5-97 |
2.38e-24 |
|
CH-like domain in sperm protein; Spef is a region of sperm flagellar proteins. It probably exerts a role in spermatogenesis in that the protein is expressed predominantly in adult tissue. It is present in the tails of developing and epididymal sperm internal to the fibrous sheath and around the dense outer fibres of the sperm flagellum. The amino-terminal domain (residues 1-110) shows a possible calponin homology (CH) domain; however Spef does not bind actin directly under in vitro conditions, so the function of the amino-terminal calponin-like domain is unclear. Transcription aberrations leading to a truncated protein result in immotile sperm.
Pssm-ID: 461871 Cd Length: 91 Bit Score: 98.66 E-value: 2.38e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 5 LCQWLnQELRVSRTVspKSFAKAFSNGYLIGEVLFKFELQS-DFAEFSESRGSTAKLNNFSRLQPTLHLLGLQFDQNVAQ 83
Cdd:pfam06294 1 LLKWL-QSLDLSRPV--RNIARDFSDGFLVAEILSRYYPKLvDLHNYSPGSSVAAKLNNWETLEKVLKKLGIKLSKEDIE 77
|
90
....*....|....
gi 758170212 84 SIITEKPGAATKLL 97
Cdd:pfam06294 78 DLANGKPGAAERLL 91
|
|
| ADK |
cd01428 |
Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine ... |
673-857 |
2.19e-13 |
|
Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP). This enzyme is required for the biosynthesis of ADP and is essential for homeostasis of adenosine phosphates.
Pssm-ID: 238713 [Multi-domain] Cd Length: 194 Bit Score: 70.73 E-value: 2.19e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 673 RAQLGAKSEL------MLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRkflqlkkkke 746
Cdd:cd01428 35 REEIASGTELgkkakeYIDSGKLVPDEIVIKLLKERLKKPDCKKGFILDGFPRTVDQAEALDELLDEGIK---------- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 747 qmptlaldpststevsllpsaLDFVILLDISDNSS----LARTNDIIAKEISHEISHENVGRPGTGTSQDNKSEdrnlrd 822
Cdd:cd01428 105 ---------------------PDKVIELDVPDEVLieriLGRRICPVSGRVYHLGKDDVTGEPLSQRSDDNEET------ 157
|
170 180 190
....*....|....*....|....*....|....*.
gi 758170212 823 hIQHRIVGFLDN-WPLLEewFTQPKNILTKVNAEID 857
Cdd:cd01428 158 -IKKRLEVYKEQtAPLID--YYKKKGKLVEIDGSGD 190
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
101-424 |
7.50e-09 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 60.91 E-value: 7.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 101 YIALQKKKKTGLTGLEIQTMQPQTNLRL--QTLKSEAFRERLKNLIPRQTDFNLMRVTCRF----QEKCKQMKEDLARmn 174
Cdd:pfam17380 233 YEKMERRKESFNLAEDVTTMTPEYTVRYngQTMTENEFLNQLLHIVQHQKAVSERQQQEKFekmeQERLRQEKEEKAR-- 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 175 feKFEKIQKLEEEQ--RHFNIEKQRLNRRRQNEIMAKIQAAIIQIPKPESNRTLKAIEAQKL---MKKKKEAEDVANEIK 249
Cdd:pfam17380 311 --EVERRRKLEEAEkaRQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIameISRMRELERLQMERQ 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 250 KFEALIKKDLQIKESV---SKTSLETTDQTTAELLNTYSDDDYIKKIQ-KRLEEDafareqrekrrrrllMDQLMAHEAQ 325
Cdd:pfam17380 389 QKNERVRQELEAARKVkilEEERQRKIQQQKVEMEQIRAEQEEARQREvRRLEEE---------------RAREMERVRL 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 326 EEAYREEQlIHRLMRQSQQERRIAVQL-MHVRHEKEVLWQNRIFREKQFEERRLKDFQDAL----------DREAALAKQ 394
Cdd:pfam17380 454 EEQERQQQ-VERLRQQEEERKRKKLELeKEKRDRKRAEEQRRKILEKELEERKQAMIEEERkrkllekemeERQKAIYEE 532
|
330 340 350
....*....|....*....|....*....|.
gi 758170212 395 AKIDFAEQTLR-EKEIHEKisvERAQQRYKK 424
Cdd:pfam17380 533 ERRREAEEERRkQQEMEER---RRIQEQMRK 560
|
|
| Adk |
COG0563 |
Adenylate kinase or related kinase [Nucleotide transport and metabolism]; Adenylate kinase or ... |
672-858 |
6.84e-08 |
|
Adenylate kinase or related kinase [Nucleotide transport and metabolism]; Adenylate kinase or related kinase is part of the Pathway/BioSystem: Pyrimidine biosynthesis
Pssm-ID: 440329 [Multi-domain] Cd Length: 212 Bit Score: 54.75 E-value: 6.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 672 MRAQLGAKSEL------MLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRKflqlkkkk 745
Cdd:COG0563 35 LRAAVKAGTELgkkakeYMDAGELVPDEIVIGLVKERLAQPDCANGFILDGFPRTVAQAEALDELLAELGIK-------- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 746 eqmptlaldpststevsllpsaLDFVILLDISDNSSLARtndiiakeISHEISHENVGRPGTGTSQDNKSEDRNLRDH-- 823
Cdd:COG0563 107 ----------------------LDAVIELDVDDEELVER--------LSGRRVCPNCGATYHVKFNPPKVEGVCDKCGge 156
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 758170212 824 -----------IQHRIVGFLDN-WPLLEewFTQPKNILTKVNAE--IDE 858
Cdd:COG0563 157 lvqraddneetVRKRLEVYHEQtAPLID--YYRKKGKLVEIDGEgsIEE 203
|
|
| ADK |
pfam00406 |
Adenylate kinase; |
672-804 |
2.56e-06 |
|
Adenylate kinase;
Pssm-ID: 395329 [Multi-domain] Cd Length: 184 Bit Score: 49.61 E-value: 2.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 672 MRAQLGAKSEL------MLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRkflqlkkkk 745
Cdd:pfam00406 31 LRAEIKSGTELgkeakeYMDKGELVPDEVVVGLVKERLEQNDCKNGFLLDGFPRTVPQAEALEELLERGIK--------- 101
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 758170212 746 eqmptlaldpststevsllpsaLDFVILLDISDnsslartnDIIAKEISHEISHENVGR 804
Cdd:pfam00406 102 ----------------------LDYVIEFDVPD--------EVLVERLTGRRIHPNSGR 130
|
|
| adk |
PRK00279 |
adenylate kinase; Reviewed |
673-784 |
5.27e-05 |
|
adenylate kinase; Reviewed
Pssm-ID: 234711 [Multi-domain] Cd Length: 215 Bit Score: 46.30 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 673 RAQLGAKSELMLR------RGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYKRKflqlkkkke 746
Cdd:PRK00279 36 RAAVKAGTELGKEaksymdAGELVPDEIVIGLVKERLAQPDCKNGFLLDGFPRTIPQAEALDEMLKELGIK--------- 106
|
90 100 110
....*....|....*....|....*....|....*...
gi 758170212 747 qmptlaldpststevsllpsaLDFVILLDISDNSSLAR 784
Cdd:PRK00279 107 ---------------------LDAVIEIDVPDEELVER 123
|
|
| PRK14531 |
PRK14531 |
adenylate kinase; Provisional |
672-754 |
1.51e-04 |
|
adenylate kinase; Provisional
Pssm-ID: 172997 [Multi-domain] Cd Length: 183 Bit Score: 44.42 E-value: 1.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 672 MRAQLGAKSEL------MLRRGKSIPDILLVSILVNAIKEIPvDQSWVLDGFPITLNQAKLLEEALTgykrkflQLKKKK 745
Cdd:PRK14531 37 LRSEVAAGSALgqeaeaVMNRGELVSDALVLAIVESQLKALN-SGGWLLDGFPRTVAQAEALEPLLE-------ELKQPI 108
|
....*....
gi 758170212 746 EQMPTLALD 754
Cdd:PRK14531 109 EAVVLLELD 117
|
|
| adk |
PRK02496 |
adenylate kinase; Provisional |
663-732 |
2.36e-04 |
|
adenylate kinase; Provisional
Pssm-ID: 179433 [Multi-domain] Cd Length: 184 Bit Score: 43.97 E-value: 2.36e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 758170212 663 SSDSFLSLSMRAQ--LGAKSELMLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALT 732
Cdd:PRK02496 31 STGDILRQAIKEQtpLGIKAQGYMDKGELVPDQLVLDLVQERLQQPDAANGWILDGFPRKVTQAAFLDELLQ 102
|
|
| PLN02674 |
PLN02674 |
adenylate kinase |
627-731 |
3.68e-04 |
|
adenylate kinase
Pssm-ID: 178279 [Multi-domain] Cd Length: 244 Bit Score: 44.11 E-value: 3.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 627 KVSKTQDKNVLAVSPVPGDRTSQKEGVKINEFEQFRSSDSFLSLSMRAQ--LGAKSELMLRRGKSIPDILLVSILVNAIK 704
Cdd:PLN02674 25 KCSSKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKtpLGIKAKEAMDKGELVSDDLVVGIIDEAMK 104
|
90 100
....*....|....*....|....*..
gi 758170212 705 EIPVDQSWVLDGFPITLNQAKLLEEAL 731
Cdd:PLN02674 105 KPSCQKGFILDGFPRTVVQAQKLDEML 131
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
158-431 |
2.18e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 158 RFQEKCKQMKEDLARMNFEKFEKIQKLE-----EEQRHFNIekqrlnrrRQNEIMAKIQAAIIQ--IPKPESNRTLKAIE 230
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKAEEKKKAEeakkaEEDKNMAL--------RKAEEAKKAEEARIEevMKLYEEEKKMKAEE 1611
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 231 AqklmKKKKEAEDVANEIKKFEALIKKDLQIKESvsktslETTDQTTAELLNTYSDDDYIKKIQ--KRLEEDAFAREQRE 308
Cdd:PTZ00121 1612 A----KKAEEAKIKAEELKKAEEEKKKVEQLKKK------EAEEKKKAEELKKAEEENKIKAAEeaKKAEEDKKKAEEAK 1681
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 309 KRRRRLLMDQLMAHEAQEEAYREEQLIHRL---------MRQSQQERRIAVQLMHvRHEKEVLWQNRIFREKQFEERRLK 379
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAKKAEELKKKEaeekkkaeeLKKAEEENKIKAEEAK-KEAEEDKKKAEEAKKDEEEKKKIA 1760
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 758170212 380 DFQDALDREAALAKQAKIDFAEQTLREKEIHEKISVERAQQRYKKHYGICAE 431
Cdd:PTZ00121 1761 HLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIE 1812
|
|
| PRK14526 |
PRK14526 |
adenylate kinase; Provisional |
676-735 |
3.31e-03 |
|
adenylate kinase; Provisional
Pssm-ID: 172992 [Multi-domain] Cd Length: 211 Bit Score: 40.99 E-value: 3.31e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 676 LGAKSELMLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEALTGYK 735
Cdd:PRK14526 45 LGKEIKQIVENGQLVPDSITIKIVEDKINTIKNNDNFILDGFPRNINQAKALDKFLPNIK 104
|
|
| PRK14528 |
PRK14528 |
adenylate kinase; Provisional |
676-731 |
7.24e-03 |
|
adenylate kinase; Provisional
Pssm-ID: 172994 [Multi-domain] Cd Length: 186 Bit Score: 39.61 E-value: 7.24e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 758170212 676 LGAKSELMLRRGKSIPDILLVSILVNAIKEIPVDQSWVLDGFPITLNQAKLLEEAL 731
Cdd:PRK14528 46 MGIEAKRYMDAGDLVPDSVVIGIIKDRIREADCKNGFLLDGFPRTVEQADALDALL 101
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
99-420 |
9.14e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.11 E-value: 9.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 99 QLYIALQKKKKTGLTGLEIQTMQPQ-----TNLRLQTL--KSEAFRERLKNLIPRQTDFNLMRVTCRFQEKCKQMKEDLA 171
Cdd:TIGR00618 180 QLALMEFAKKKSLHGKAELLTLRSQlltlcTPCMPDTYheRKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQ 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 172 RMNFEKFEKIQKLEEEQRHFNIEKQRLNRRRQNEIMAKIQAAIIQIPK--PESNRTLKAIEAQKlmkkkkeaedvANEIK 249
Cdd:TIGR00618 260 QLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQqaQRIHTELQSKMRSR-----------AKLLM 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 250 KFEALIKKDLQIKEsvsKTSLETTDQTTAELLNTYSDDDYIKKIQKRLEEDAFAREQREKRRRRLLMDQLMAHEAQEEAY 329
Cdd:TIGR00618 329 KRAAHVKQQSSIEE---QRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDIL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758170212 330 REEQliHRLMRQSQQERRIAVQLMHVRH----EKEVLWQNRIFREKQF-----EERRLKDFQDALDREAALAKQAKIdFA 400
Cdd:TIGR00618 406 QREQ--ATIDTRTSAFRDLQGQLAHAKKqqelQQRYAELCAAAITCTAqceklEKIHLQESAQSLKEREQQLQTKEQ-IH 482
|
330 340
....*....|....*....|
gi 758170212 401 EQTLREKEIHEKISVERAQQ 420
Cdd:TIGR00618 483 LQETRKKAVVLARLLELQEE 502
|
|
| |
