NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|948549877|ref|NP_001303926|]
View 

zinc finger protein 257 isoform c [Homo sapiens]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
81-396 1.65e-09

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 59.71  E-value: 1.65e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877  81 FSNSDRHKIRHTEKKTCKCKECGKSFCMLSQLTRHKRIHIRENSHKCEECGKAFNQSSALTRHKMTHTGEKPYKCEECGK 160
Cdd:COG5048  128 LPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSS 207

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 161 aFNRSSHLTQHKVIHTREKPYKCEECGKAFNRSSHITQHKRIHNREKPFKYDECCKAFKwSSALTTLTQHKRIHTGE--- 237
Cdd:COG5048  208 -SYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL-PTASSQSSSPNESDSSSekg 285

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 238 --KPYKCEECGKAFNQSSALTRHK--MIHTGE--KPFQCEE--CGKAFNRSSHLTQHKIIHTKEKPYKC--EECGKAFNR 307
Cdd:COG5048  286 fsLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSP 365

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 308 SSH------LTKHKRIHTREKAYKCDEYCKAFNWSSALTTLTQHKIIHTGEKPYKCEECGKAFNRSSYLIRHKIIHTGEK 381
Cdd:COG5048  366 LLNneppqsLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHA 445

                        330
                 ....*....|....*
gi 948549877 382 PYKCEECGKAFNQSS 396
Cdd:COG5048  446 PLLCSILKSFRRDLD 460
SFP1 super family cl25788
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 379-458 2.16e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5189:

Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.47  E-value: 2.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 379 GEKPYKCE--ECGKAFNQSSHLTQHKiihtgekpyKCEECGKAFNRSSHLSQHKIIHTGEKPYKCEECGKPFNRFSYLTV 456
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ..
gi 948549877 457 HK 458
Cdd:COG5189  417 HR 418
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
81-396 1.65e-09

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 59.71  E-value: 1.65e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877  81 FSNSDRHKIRHTEKKTCKCKECGKSFCMLSQLTRHKRIHIRENSHKCEECGKAFNQSSALTRHKMTHTGEKPYKCEECGK 160
Cdd:COG5048  128 LPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSS 207

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 161 aFNRSSHLTQHKVIHTREKPYKCEECGKAFNRSSHITQHKRIHNREKPFKYDECCKAFKwSSALTTLTQHKRIHTGE--- 237
Cdd:COG5048  208 -SYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL-PTASSQSSSPNESDSSSekg 285

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 238 --KPYKCEECGKAFNQSSALTRHK--MIHTGE--KPFQCEE--CGKAFNRSSHLTQHKIIHTKEKPYKC--EECGKAFNR 307
Cdd:COG5048  286 fsLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSP 365

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 308 SSH------LTKHKRIHTREKAYKCDEYCKAFNWSSALTTLTQHKIIHTGEKPYKCEECGKAFNRSSYLIRHKIIHTGEK 381
Cdd:COG5048  366 LLNneppqsLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHA 445

                        330
                 ....*....|....*
gi 948549877 382 PYKCEECGKAFNQSS 396
Cdd:COG5048  446 PLLCSILKSFRRDLD 460
zf-H2C2_2 pfam13465
Zinc-finger double domain;
227-251 1.04e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.04e-03
                          10        20
                  ....*....|....*....|....*
gi 948549877  227 LTQHKRIHTGEKPYKCEECGKAFNQ 251
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 379-458 2.16e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.47  E-value: 2.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 379 GEKPYKCE--ECGKAFNQSSHLTQHKiihtgekpyKCEECGKAFNRSSHLSQHKIIHTGEKPYKCEECGKPFNRFSYLTV 456
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ..
gi 948549877 457 HK 458
Cdd:COG5189  417 HR 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
397-422 2.17e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.17e-03
                          10        20
                  ....*....|....*....|....*.
gi 948549877  397 HLTQHKIIHTGEKPYKCEECGKAFNR 422
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
81-396 1.65e-09

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 59.71  E-value: 1.65e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877  81 FSNSDRHKIRHTEKKTCKCKECGKSFCMLSQLTRHKRIHIRENSHKCEECGKAFNQSSALTRHKMTHTGEKPYKCEECGK 160
Cdd:COG5048  128 LPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSS 207

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 161 aFNRSSHLTQHKVIHTREKPYKCEECGKAFNRSSHITQHKRIHNREKPFKYDECCKAFKwSSALTTLTQHKRIHTGE--- 237
Cdd:COG5048  208 -SYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSL-PTASSQSSSPNESDSSSekg 285

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 238 --KPYKCEECGKAFNQSSALTRHK--MIHTGE--KPFQCEE--CGKAFNRSSHLTQHKIIHTKEKPYKC--EECGKAFNR 307
Cdd:COG5048  286 fsLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSP 365

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 308 SSH------LTKHKRIHTREKAYKCDEYCKAFNWSSALTTLTQHKIIHTGEKPYKCEECGKAFNRSSYLIRHKIIHTGEK 381
Cdd:COG5048  366 LLNneppqsLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHA 445

                        330
                 ....*....|....*
gi 948549877 382 PYKCEECGKAFNQSS 396
Cdd:COG5048  446 PLLCSILKSFRRDLD 460
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
151-469 3.40e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 55.86  E-value: 3.40e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 151 KPYKCEECGKAFNRSSHLTQHKVIHTREKPYKC--EECGKAFNRSSHITQHKRIHNREKPfkyDECCKAFkwSSALTTLT 228
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPS---DLNSKSL--PLSNSKAS 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 229 QHKRIHTGEKPYKCE-ECGKAFNQSSaltRHKMIHTGEKPFQCEECG-KAFNRSSHLTQH--KIIHTKEKPYKCEECGKA 304
Cdd:COG5048  107 SSSLSSSSSNSNDNNlLSSHSLPPSS---RDPQLPDLLSISNLRNNPlPGNNSSSVNTPQsnSLHPPLPANSLSKDPSSN 183

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 305 FNRSSHLTKHkrihtreKAYKCDEYCKAFNWSSALTTLTQHKIIHTGEKPYKCEECGKAFNRSSYLIRHKIIHTGEKPYK 384
Cdd:COG5048  184 LSLLISSNVS-------TSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSS 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 385 CEECGKAFNQSSHLTQHKIIHTGE-------KPYKCEECGKAFNRSSHLSQHK--IIHTGE--KPYKCEE--CGKPFNRF 451
Cdd:COG5048  257 ASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRN 336

                        330
                 ....*....|....*...
gi 948549877 452 SYLTVHKRIHAGENPNKY 469
Cdd:COG5048  337 DALKRHILLHTSISPAKE 354
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
123-487 4.02e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 55.47  E-value: 4.02e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 123 NSHKCEECGKAFNQSSALTRHKMTHTGEKPYKC--EECGKAFNRSSHLTQHKVIHTREKPYKCE---------------- 184
Cdd:COG5048   32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNSkslplsnskassssls 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 185 ECGKAFNR-------SSHITQHKRIHNREKPFKYDECCKAFKWSSALTTLTQHKRIHtGEKPYKCEECGKAFNQSSALtr 257
Cdd:COG5048  112 SSSSNSNDnnllsshSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLH-PPLPANSLSKDPSSNLSLLI-- 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 258 HKMIHTGEKPFQCEECGKAFNRSSHLTQHKIIHTKEKPYKCEECGKAF----NRSSHLTKHKRIHTREK-----AYKCDE 328
Cdd:COG5048  189 SSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSpkslLSQSPSSLSSSDSSSSAsesprSSLPTA 268

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 329 YCKAFNWSSALTTLTQHKIihtgeKPYKCEECGKAFNRSSYLIRHK--IIHTGE--KPYKCEE--CGKAFNQSSHLTQHK 402
Cdd:COG5048  269 SSQSSSPNESDSSSEKGFS-----LPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHI 343

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 403 IIHTGEKPYKC--EECGKAFNRSS------HLSQHKIIHTGEKPYKCE-ECGKPFNRFSYLTVHKRIHAGENP--NKYEE 471
Cdd:COG5048  344 LLHTSISPAKEklLNSSSKFSPLLnneppqSLQQYKDLKNDKKSETLSnSCIRNFKRDSNLSLHIITHLSFRPynCKNPP 423

                        410
                 ....*....|....*.
gi 948549877 472 CGKACNHSSNLTKHNS 487
Cdd:COG5048  424 CSKSFNRHYNLIPHKK 439
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 193-315 6.96e-05

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 45.09  E-value: 6.96e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 193 SSHITQHKRIHNREKPFKYDECCKAFKWSSALTTLTQHKRIHT-GEKPYKCE--ECGKAFNQSSALTRHkMIHTGEKPFQ 269
Cdd:COG5189  302 RGGISTGEMIDVRKLPCTNSSSNGKLAHGGERNIDTPSRMLKVkDGKPYKCPveGCNKKYKNQNGLKYH-MLHGHQNQKL 380

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 948549877 270 CEECGKafnrsshlTQHKIIHTKEKPYKCEECGKAFNRSSHLTKHK 315
Cdd:COG5189  381 HENPSP--------EKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
227-251 1.04e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.04e-03
                          10        20
                  ....*....|....*....|....*
gi 948549877  227 LTQHKRIHTGEKPYKCEECGKAFNQ 251
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
139-164 1.60e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.60e-03
                          10        20
                  ....*....|....*....|....*.
gi 948549877  139 ALTRHKMTHTGEKPYKCEECGKAFNR 164
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
369-394 1.93e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.93e-03
                          10        20
                  ....*....|....*....|....*.
gi 948549877  369 YLIRHKIIHTGEKPYKCEECGKAFNQ 394
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 379-458 2.16e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.47  E-value: 2.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 379 GEKPYKCE--ECGKAFNQSSHLTQHKiihtgekpyKCEECGKAFNRSSHLSQHKIIHTGEKPYKCEECGKPFNRFSYLTV 456
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ..
gi 948549877 457 HK 458
Cdd:COG5189  417 HR 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
397-422 2.17e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.17e-03
                          10        20
                  ....*....|....*....|....*.
gi 948549877  397 HLTQHKIIHTGEKPYKCEECGKAFNR 422
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
254-279 3.01e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.01e-03
                          10        20
                  ....*....|....*....|....*.
gi 948549877  254 ALTRHKMIHTGEKPFQCEECGKAFNR 279
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
292-406 3.37e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 39.68  E-value: 3.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 292 KEKPYKCEECGKAFNRSSHLTKHKRIHTREKAYKCDeYCKAFNWSSALTTLTQHKIIHTGEKPYkcEECGKAFNRSSYLI 371
Cdd:COG5048   30 APRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCS-YSGCDKSFSRPLELSRHLRTHHNNPSD--LNSKSLPLSNSKAS 106

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 948549877 372 RHKIIHTGEKPYKCE-ECGKAFNQSSHLTQHKIIHT 406
Cdd:COG5048  107 SSSLSSSSSNSNDNNlLSSHSLPPSSRDPQLPDLLS 142
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 351-430 3.62e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.70  E-value: 3.62e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948549877 351 GEKPYKCE--ECGKAFNRSSYLIRHKiihtgekpyKCEECGKAFNQSSHLTQHKIIHTGEKPYKCEECGKAFNRSSHLSQ 428
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHM---------LHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ..
gi 948549877 429 HK 430
Cdd:COG5189  417 HR 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
282-307 4.32e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 4.32e-03
                          10        20
                  ....*....|....*....|....*.
gi 948549877  282 HLTQHKIIHTKEKPYKCEECGKAFNR 307
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
342-366 4.32e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 4.32e-03
                          10        20
                  ....*....|....*....|....*
gi 948549877  342 LTQHKIIHTGEKPYKCEECGKAFNR 366
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH