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Conserved domains on  [gi|1013371133|ref|NP_001308900|]
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adhesion G-protein coupled receptor F3 isoform 4 [Homo sapiens]

Protein Classification

adhesion G protein-coupled receptor( domain architecture ID 12039907)

adhesion G protein-coupled receptor (GPCR) is involved in cell adhesion and cell-cell interactions; GPCRs transmit physiological signals from the outside of the cell to the inside via G proteins by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
699-969 1.13e-163

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


:

Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 481.18  E-value: 1.13e-163
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLVWRVVVRNKISYFRHAALLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAF 778
Cdd:cd15253      1 SFWLDFLSQVGLGASILALLLCLGIYRLVWRSVVRNKISYFRHMTLVNIAFSLLLADTCFLGATFLSAGHESPLCLAAAF 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGQYLREGECWLDGKGGAL 858
Cdd:cd15253     81 LCHFFYLATFFWMLVQALMLFHQLLFVFHQLAKRSVLPLMVTLGYLCPLLIAAATVAYYYPKRQYLHEGACWLNGESGAI 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  859 YTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVPHYIFT 938
Cdd:cd15253    161 YAFSIPVLAIVLVNLLVLFVVLMKLMRPSVSEGPPPEERKALLSIFKALLVLTPVFGLTWGLGVATLTGESSQVSHYGFA 240
                          250       260       270
                   ....*....|....*....|....*....|.
gi 1013371133  939 ILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15253    241 ILNAFQGVFILLFGCLMDKKVREALLKRLCK 271
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
645-690 4.01e-12

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


:

Pssm-ID: 460350  Cd Length: 44  Bit Score: 61.55  E-value: 4.01e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1013371133  645 PHCVFWDHSLFqGRGGWSKEGCQAQVASASPTaQCLCQHLTAFSVL 690
Cdd:pfam01825    1 PQCVFWDFTNS-TTGRWSTEGCTTVSLNDTHT-VCSCNHLTSFAVL 44
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
363-409 4.91e-06

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


:

Pssm-ID: 397086  Cd Length: 64  Bit Score: 45.05  E-value: 4.91e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1013371133  363 CPED-ASVLTWNVTKAGHVAQAPCPE-----SKRGIVRRLCGADGVWGPVHSS 409
Cdd:pfam02793    4 CPRTwDGILCWPRTPAGETVEVPCPDyfsgfDPRGNASRNCTEDGTWSEHPPS 56
 
Name Accession Description Interval E-value
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
699-969 1.13e-163

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 481.18  E-value: 1.13e-163
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLVWRVVVRNKISYFRHAALLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAF 778
Cdd:cd15253      1 SFWLDFLSQVGLGASILALLLCLGIYRLVWRSVVRNKISYFRHMTLVNIAFSLLLADTCFLGATFLSAGHESPLCLAAAF 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGQYLREGECWLDGKGGAL 858
Cdd:cd15253     81 LCHFFYLATFFWMLVQALMLFHQLLFVFHQLAKRSVLPLMVTLGYLCPLLIAAATVAYYYPKRQYLHEGACWLNGESGAI 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  859 YTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVPHYIFT 938
Cdd:cd15253    161 YAFSIPVLAIVLVNLLVLFVVLMKLMRPSVSEGPPPEERKALLSIFKALLVLTPVFGLTWGLGVATLTGESSQVSHYGFA 240
                          250       260       270
                   ....*....|....*....|....*....|.
gi 1013371133  939 ILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15253    241 ILNAFQGVFILLFGCLMDKKVREALLKRLCK 271
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
702-948 3.54e-31

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 122.77  E-value: 3.54e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYWLVwrvvvrNKISYFRHAALLNMVFCLLAADTCFL------GAPFLSPGPRSPLCLA 775
Cdd:pfam00002    4 LKVIYTVGYSLSLVALLLAIAIFLLF------RKLHCTRNYIHLNLFASFILRALLFLvgdavlFNKQDLDHCSWVGCKV 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  776 AAFLCHFLYLATFFWMLAQALVLAHQLLFVFhqLAKHRVLPLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWLDGKG 855
Cdd:pfam00002   78 VAVFLHYFFLANFFWMLVEGLYLYTLLVEVF--FSERKYFWWYLLIGWGVPALVVGIWAGVD-PKG-YGEDDGCWLSNEN 153
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  856 GALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEE--VSTVP 933
Cdd:pfam00002  154 GLWWIIRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDLKQYRRLAKSTLLLLPLLGITWVFGLFAFNPEntLRVVF 233
                          250
                   ....*....|....*
gi 1013371133  934 HYIFTILNTLQGVFI 948
Cdd:pfam00002  234 LYLFLILNSFQGFFV 248
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
645-690 4.01e-12

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 61.55  E-value: 4.01e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1013371133  645 PHCVFWDHSLFqGRGGWSKEGCQAQVASASPTaQCLCQHLTAFSVL 690
Cdd:pfam01825    1 PQCVFWDFTNS-TTGRWSTEGCTTVSLNDTHT-VCSCNHLTSFAVL 44
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
643-693 2.25e-11

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 59.71  E-value: 2.25e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|.
gi 1013371133   643 GSPHCVFWDHSlfqgRGGWSKEGCQAQVASASpTAQCLCQHLTAFSVLMSP 693
Cdd:smart00303    1 FNPICVFWDES----SGEWSTRGCELLETNGT-HTTCSCNHLTTFAVLMDV 46
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
363-409 4.91e-06

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 45.05  E-value: 4.91e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1013371133  363 CPED-ASVLTWNVTKAGHVAQAPCPE-----SKRGIVRRLCGADGVWGPVHSS 409
Cdd:pfam02793    4 CPRTwDGILCWPRTPAGETVEVPCPDyfsgfDPRGNASRNCTEDGTWSEHPPS 56
HormR smart00008
Domain present in hormone receptors;
363-411 1.42e-04

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 40.96  E-value: 1.42e-04
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1013371133   363 CPED-ASVLTWNVTKAGHVAQAPCPESKRGI-----VRRLCGADGVWGPVHSS---CT 411
Cdd:smart00008    5 CPATwDGIICWPQTPAGQLVEVPCPKYFSGFsyktgASRNCTENGGWSPPFPNysnCT 62
 
Name Accession Description Interval E-value
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
699-969 1.13e-163

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 481.18  E-value: 1.13e-163
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLVWRVVVRNKISYFRHAALLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAF 778
Cdd:cd15253      1 SFWLDFLSQVGLGASILALLLCLGIYRLVWRSVVRNKISYFRHMTLVNIAFSLLLADTCFLGATFLSAGHESPLCLAAAF 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGQYLREGECWLDGKGGAL 858
Cdd:cd15253     81 LCHFFYLATFFWMLVQALMLFHQLLFVFHQLAKRSVLPLMVTLGYLCPLLIAAATVAYYYPKRQYLHEGACWLNGESGAI 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  859 YTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVPHYIFT 938
Cdd:cd15253    161 YAFSIPVLAIVLVNLLVLFVVLMKLMRPSVSEGPPPEERKALLSIFKALLVLTPVFGLTWGLGVATLTGESSQVSHYGFA 240
                          250       260       270
                   ....*....|....*....|....*....|.
gi 1013371133  939 ILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15253    241 ILNAFQGVFILLFGCLMDKKVREALLKRLCK 271
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
699-964 4.83e-138

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 414.79  E-value: 4.83e-138
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLVWRVVVRNKISYFRHAALLNMVFCLLAADTCFLGAPFLSPGPR-SPLCLAAA 777
Cdd:cd15932      1 SPALDYITYVGLGISILSLVLCLIIEALVWKSVTKNKTSYMRHVCLVNIALSLLIADIWFIIGAAISTPPNpSPACTAAT 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  778 FLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGQYLREGECWLD-GKGG 856
Cdd:cd15932     81 FFIHFFYLALFFWMLTLGLLLFYRLVLVFHDMSKSTMMAIAFSLGYGCPLIIAIITVAATAPQGGYTRKGVCWLNwDKTK 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  857 ALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVPHYI 936
Cdd:cd15932    161 ALLAFVIPALAIVVVNFIILIVVIFKLLRPSVGERPSKDEKNALVQIGKSVAILTPLLGLTWGFGLGTMIDPKSLAFHII 240
                          250       260
                   ....*....|....*....|....*...
gi 1013371133  937 FTILNTLQGVFILLFGCLMDRKIQEALR 964
Cdd:cd15932    241 FAILNSFQGFFILVFGTLLDSKVREALL 268
7tmB2_GPR116_Ig-Hepta cd15254
The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family ...
702-967 1.80e-74

The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR116 (also known as Ig-hepta) is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR113, and GPR115. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR116 has four I-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. GPR116 is highly expressed in fetal and adult lung, and it has been shown to regulate lung surfactant levels as well as to stimulate breast cancer metastasis through a G(q)-p63-RhoGEF-Rho GTPase signaling pathway. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320382 [Multi-domain]  Cd Length: 275  Bit Score: 246.64  E-value: 1.80e-74
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYWLVWRVVVRNKISYFRHAALLNMVFCLLAADTCFLGAPFLSPGPR---SPLCLAAAF 778
Cdd:cd15254      4 LDYITYIGLSISILSLAICIVIESLVWKSVTKNRTSYMRHVCILNIAVSLLIADIWFIVVAAIQDQNYavnGNVCVAATF 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGQYLREGECWLDGKGG-A 857
Cdd:cd15254     84 FIHFFYLCVFFWMLALGLMLFYRLVFILHDTSKTIQKAVAFCLGYGCPLIISVITIAVTLPRDSYTRKKVCWLNWEDSkA 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  858 LYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVPHYIF 937
Cdd:cd15254    164 LLAFVIPALIIVAVNSIITVVVIVKILRPSIGEKPSKQERSSLFQIIKSIGVLTPLLGLTWGFGLATVIKGSSIVFHILF 243
                          250       260       270
                   ....*....|....*....|....*....|
gi 1013371133  938 TILNTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15254    244 TLLNAFQGLFILVFGTLWDKKVQEALLNKY 273
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
702-964 2.50e-64

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 218.17  E-value: 2.50e-64
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYWLVWRVVVRNKISYFRHAALLNMVFCLLAADTCFLGAPFLS-PGPRSPLCLAAAFLC 780
Cdd:cd15994      4 LDYITRIGLGLSIFSLALCLTIEAVVWSHVTKTEITYMRHVCIVNIATSLLIADVWFILASIVHnTALNYPLCVAATFFL 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  781 HFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGQYLREGECWLD-GKGGALY 859
Cdd:cd15994     84 HFFYLSLFFWMLTKALLILYGILLVFFKITKSVFIATAFSIGYGCPLVIAVLTVAITEPKKGYLRPEACWLNwDETKALL 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  860 TFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRqALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVPHYIFTI 939
Cdd:cd15994    164 AFIIPALSIVVVNLIVVGVVVVKTQRSSIGESCKQDVS-NIIRISKNVAILTPLLGLTWGFGLATIIDSRSLPFHIIFAL 242
                          250       260
                   ....*....|....*....|....*
gi 1013371133  940 LNTLQGVFILLFGCLMDRKIQEALR 964
Cdd:cd15994    243 LNAFQGFFILLFGTILDRKIRIALY 267
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
699-962 4.41e-64

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 217.06  E-value: 4.41e-64
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLV--WRVVVRNKIsyfrhaaLLNMVFCLLAADTCFLGAPFLSPGPrsPLCLAA 776
Cdd:cd15040      1 EKALSIITYIGCGLSLLGLLLTIITYILFrkLRKRKPTKI-------LLNLCLALLLANLLFLFGINSTDNP--VLCTAV 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  777 AFLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPlMVLLGYLCPLGLAGVTLGLYlPQGQYLREGECWLDGKGG 856
Cdd:cd15040     72 AALLHYFLLASFMWMLVEALLLYLRLVKVFGTYPRHFILK-YALIGWGLPLIIVIITLAVD-PDSYGNSSGYCWLSNGNG 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  857 ALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEgpPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLeEVSTVPHYI 936
Cdd:cd15040    150 LYYAFLGPVLLIILVNLVIFVLVLRKLLRLSAKR--NKKKRKKTKAQLRAAVSLFFLLGLTWIFGILAIF-GARVVFQYL 226
                          250       260
                   ....*....|....*....|....*.
gi 1013371133  937 FTILNTLQGVFILLFGCLMDRKIQEA 962
Cdd:cd15040    227 FAIFNSLQGFFIFIFHCLRNKEVRKA 252
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
699-963 1.47e-56

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 196.28  E-value: 1.47e-56
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLVWRV-VVRNKIsyfrhaaLLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAA 777
Cdd:cd13952      1 DLALSIITYIGCSLSLVGLLLTIITYLLFPKLrNLRGKI-------LINLCLSLLLAQLLFLIGQLLTSSDRPVLCKALA 73
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  778 FLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLpLMVLLGYLCPLGLAGVTLGL---YLPQGQYLREGECWLDGK 854
Cdd:cd13952     74 ILLHYFLLASFFWMLVEAFDLYRTFVKVFGSSERRRFL-KYSLYGWGLPLLIVIITAIVdfsLYGPSPGYGGEYCWLSNG 152
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  855 GGALYTFVGPVLAIIGVNGLVLAMAMLKLLRpSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVPH 934
Cdd:cd13952    153 NALLWAFYGPVLLILLVNLVFFILTVRILLR-KLRETPKQSERKSDRKQLRAYLKLFPLMGLTWIFGILAPFVGGSLVFW 231
                          250       260
                   ....*....|....*....|....*....
gi 1013371133  935 YIFTILNTLQGVFILLFGCLMDRKIQEAL 963
Cdd:cd13952    232 YLFDILNSLQGFFIFLIFCLKNKEVRRLL 260
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
699-963 7.32e-43

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 156.72  E-value: 7.32e-43
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYwLVWRVVVRNKisYFRHAallNMVFCLLAADTCFLGAPFLSPGPrsPLCLAAAF 778
Cdd:cd15933      1 ERALSIISYIGCGISIACLALTLIIF-LVLRVLSSDR--FQIHK---NLCVALLLAQILLLAGEWAEGNK--VACKVVAI 72
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRvlpLMVLLGYLCPLGLAGVTLGlYLPQGqYLREGECWLDGKGGAL 858
Cdd:cd15933     73 LLHFFFMAAFSWMLVEGLHLYLMIVKVFNYKSKMR---YYYFIGWGLPAIIVAISLA-ILFDD-YGSPNVCWLSLDDGLI 147
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  859 YTFVGPVLAIIGVNGLVL-AMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEvSTVPHYIF 937
Cdd:cd15933    148 WAFVGPVIFIITVNTVILiLVVKITVSLSTNDAKKSQGTLAQIKSTAKASVVLLPILGLTWLFGVLVVNSQ-TIVFQYIF 226
                          250       260
                   ....*....|....*....|....*.
gi 1013371133  938 TILNTLQGVFILLFGCLMDRKIQEAL 963
Cdd:cd15933    227 VILNSLQGLMIFLFHCVLNSEVRSAF 252
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
701-969 2.77e-40

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 149.72  E-value: 2.77e-40
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  701 ALALLTQVGLGASILALLVCLGVYWLVWRV-VVRNKIsyfrHAallNMVFCLLAADTCFLGAPFLSPGprSPLCLAAAFL 779
Cdd:cd15440      3 ALTFITYIGCIISIVCLLLAFITFTCFRNLqCDRNTI----HK---NLCLCLLIAEIVFLLGIDQTEN--RTLCGVIAGL 73
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 CHFLYLATFFWMLAQALVLAHQLLFVFhQLAKHRVlPLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWLDGKGGALY 859
Cdd:cd15440     74 LHYFFLAAFSWMLLEGFQLYVMLVEVF-EPEKSRI-KWYYLFGYGLPALIVAVSAGVD-PTG-YGTEDHCWLSTENGFIW 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  860 TFVGPVLAIIGVNGLVLAMAMLKLLR--PSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEvSTVPHYIF 937
Cdd:cd15440    150 SFVGPVIVVLLANLVFLGMAIYVMCRhsSRSASKKDASKLKNIRGWLKGSIVLVVLLGLTWTFGLLFINQE-SIVMAYIF 228
                          250       260       270
                   ....*....|....*....|....*....|..
gi 1013371133  938 TILNTLQGVFILLFGCLMDRKIQEALRkRFCR 969
Cdd:cd15440    229 TILNSLQGLFIFIFHCVLNEKVRKELR-RWLR 259
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
699-969 9.16e-34

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 130.92  E-value: 9.16e-34
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLgVYWLVWRVVvRNkISYFRHaalLNMVFCLLAADTCFL-GAPFLSPgprSPLCLAAA 777
Cdd:cd15439      1 DLALTVITYVGLIISLLCLFLAI-LTFLLCRSI-RN-TSTSLH---LQLSLCLFLADLLFLvGIDRTDN---KVLCSIIA 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  778 FLCHFLYLATFFWMLAQALVLAHQL--LFVFHQLAKHRVL-PLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWLDGK 854
Cdd:cd15439     72 GFLHYLFLACFAWMFLEAVHLFLTVrnLKVVNYFSSHRFKkRFMYPVGYGLPAVIVAISAAVN-PQG-YGTPKHCWLSME 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  855 GGALYTFVGPVLAIIGVNgLVLAMAMLKLLRPSLSE-----GPPAEKRQALLGVIKALLILtpifGLTWGLGLaTLLEEV 929
Cdd:cd15439    150 KGFIWSFLGPVCVIIVIN-LVLFCLTLWILREKLSSlnaevSTLKNTRLLTFKAIAQLFIL----GCTWILGL-FQVGPV 223
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|
gi 1013371133  930 STVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15439    224 ATVMAYLFTITNSLQGVFIFLVHCLLNRQVREEYRRWITG 263
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
701-969 2.68e-32

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 126.21  E-value: 2.68e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  701 ALALLTQVGLGASILALLVCLGVYwLVWRVVVRNkisyfRHAALLNMVFCLLAADTCFLGAPFLspgPRSPL-CLAAAFL 779
Cdd:cd15441      3 LLKIVTYIGIGISLVLLVIAFLVL-SCLRGLQSN-----SNSIHKNLVACLLLAELLFLLGINQ---TENLFpCKLIAIL 73
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 CHFLYLATFFWMLAQALVLAHQLLFVfhQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWLDGKGGALY 859
Cdd:cd15441     74 LHYFYLSAFSWLLVESLHLYRMLTEP--RDINHGHMRFYYLLGYGIPAIIVGLSVGLR-PDG-YGNPDFCWLSVNETLIW 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  860 TFVGPVLAIIGVNGLVLAMAMlkllRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVpHYIFTI 939
Cdd:cd15441    150 SFAGPIAFVIVITLIIFILAL----RASCTLKRHVLEKASVRTDLRSSFLLLPLLGATWVFGLLAVNEDSELL-HYLFAG 224
                          250       260       270
                   ....*....|....*....|....*....|
gi 1013371133  940 LNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15441    225 LNFLQGLFIFLFYCIFNKKVRRELKNALLR 254
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
702-948 3.54e-31

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 122.77  E-value: 3.54e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYWLVwrvvvrNKISYFRHAALLNMVFCLLAADTCFL------GAPFLSPGPRSPLCLA 775
Cdd:pfam00002    4 LKVIYTVGYSLSLVALLLAIAIFLLF------RKLHCTRNYIHLNLFASFILRALLFLvgdavlFNKQDLDHCSWVGCKV 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  776 AAFLCHFLYLATFFWMLAQALVLAHQLLFVFhqLAKHRVLPLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWLDGKG 855
Cdd:pfam00002   78 VAVFLHYFFLANFFWMLVEGLYLYTLLVEVF--FSERKYFWWYLLIGWGVPALVVGIWAGVD-PKG-YGEDDGCWLSNEN 153
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  856 GALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEE--VSTVP 933
Cdd:pfam00002  154 GLWWIIRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDLKQYRRLAKSTLLLLPLLGITWVFGLFAFNPEntLRVVF 233
                          250
                   ....*....|....*
gi 1013371133  934 HYIFTILNTLQGVFI 948
Cdd:pfam00002  234 LYLFLILNSFQGFFV 248
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
702-969 1.72e-30

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 121.41  E-value: 1.72e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYWLVwrvvvrNKISYFRHAALLNMVFCLLAADTCFLGAPFLSPGPRSplCLAAAFLCH 781
Cdd:cd15438      4 LTLITKVGLSVSLFCLFLCILTFLFC------RSIRGTRNTIHLHLCLSLFLAHLIFLLGINNTNNQVA--CAVVAGLLH 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLYLATFFWMLAQALVLAHQLLFVFH-QLAKHRvlpLMVLLGYLCPLGLAGVTLGLYlpQGQYLREGECWLDGKGGALYT 860
Cdd:cd15438     76 YFFLAAFCWMSLEGVELYLMVVQVFNtQSLKKR---YLLLIGYGVPLVIVAISAAVN--SKGYGTQRHCWLSLERGFLWS 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  861 FVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEK-RQALLGVIKALLILTpIFGLTWGLGLATLlEEVSTVPHYIFTI 939
Cdd:cd15438    151 FLGPVCLIILVNAIIFVITVWKLAEKFSSINPDMEKlRKIRALTITAIAQLC-ILGCTWIFGFFQF-SDSTLVMSYLFTI 228
                          250       260       270
                   ....*....|....*....|....*....|
gi 1013371133  940 LNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15438    229 LNSLQGLFIFLLHCLLSKQVREEYSRWLCA 258
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
701-967 2.27e-30

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 121.07  E-value: 2.27e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  701 ALALLTQVGLGASILALLVCLGVYWLVwrvvvrNKISYFRHAALLNMVFCLLAADTCFLGApfLSPGPRSPLCLAAAFLC 780
Cdd:cd15252      3 ILTRITQVGIIISLVCLAICIFTFWFF------RGLQSDRTTIHKNLCISLFLAELVFLIG--INTTTNKIFCSVIAGLL 74
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  781 HFLYLATFFWMLAQALVLAHQLLFVFHqlAKHRVLPLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWLDGKGGALYT 860
Cdd:cd15252     75 HYFFLAAFAWMFIEGIQLYLMLVEVFE--NEGSRHKNFYIFGYGSPAVIVGVSAALG-YRY-YGTTKVCWLSTENYFIWS 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  861 FVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEvSTVPHYIFTIL 940
Cdd:cd15252    151 FIGPATLIILLNLIFLGVAIYKMFRHTAGLKPEVSCLENIRSWARGAIALLFLLGLTWIFGVLHINHA-SVVMAYLFTVS 229
                          250       260
                   ....*....|....*....|....*..
gi 1013371133  941 NTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15252    230 NSLQGMFIFLFHCVLSRKVRKEYYKLF 256
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
699-968 3.74e-30

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 120.31  E-value: 3.74e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLVwrvvvrNKISYFRHAALLNMVFCLLAADTCFLGAPFLSPGPRSplCLAAAF 778
Cdd:cd15931      1 DPFLEWINRVGVIVSLFCLGLAIFTFLLC------RWIPKINTTAHLHLCLCLSMSHTLFLAGIEYVENELA--CTVMAG 72
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMLAQALvlahQLLFVFHQLAKHRVL-------PLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWL 851
Cdd:cd15931     73 LLHYLFLASFVWMLLEAL----QLHLLVRRLTKVQVIqrdglprPLLCLIGYGVPFLIVGVSALVY-SDG-YGEAKMCWL 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  852 DGKGGALYTFVGPVLAIIGVNGLVLAmAMLKLLRPSLSEGPP--AEKRQALLGVIKALLILTpIFGLTWGLGLaTLLEEV 929
Cdd:cd15931    147 SQERGFNWSFLGPVIAIIGINWILFC-ATLWCLRQTLSNMNSdiSQLKDTRLLTFKAVAQLF-ILGCTWVLGL-FQTNPV 223
                          250       260       270
                   ....*....|....*....|....*....|....*....
gi 1013371133  930 STVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFC 968
Cdd:cd15931    224 ALVFQYLFTILNSLQGAFLFLVHCLLNKEVREEYIKWLT 262
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
699-968 4.03e-29

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 117.71  E-value: 4.03e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLVWRVvvRNKISYfrhaALLNMVFCLLAADTCFLGAPfLSPGPRSPLCLAAAF 778
Cdd:cd15039      1 SSILGILTLIGLIISLVFLLLTLAVYALLPEL--RNLHGK----CLMCLVLSLFVAYLLLLIGQ-LLSSGDSTLCVALGI 73
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMlaqaLVLAHQLLFVFHQLAKH-------RVLPLMVLLGYLCPLGLAGVTLGL-YLPQGQYLR----E 846
Cdd:cd15039     74 LLHFFFLAAFFWL----NVMSFDIWRTFRGKRSSssrskerKRFLRYSLYAWGVPLLLVAVTIIVdFSPNTDSLRpgygE 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  847 GECWLDGKGGALYTFVGPVLAIIGVNGLVLAMAMLKLLRpSLSEGPPAEKR----QALLGVIKALLILTpifGLTWGLGL 922
Cdd:cd15039    150 GSCWISNPWALLLYFYGPVALLLLFNIILFILTAIRIRK-VKKETAKVQSRlrsdKQRFRLYLKLFVIM---GVTWILEI 225
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*..
gi 1013371133  923 ATLLEEVSTVPHYIFTILNTLQGVFI-LLFGCLmdRKIQEALRKRFC 968
Cdd:cd15039    226 ISWFVGGSSVLWYIFDILNGLQGVFIfLIFVCK--RRVLRLLKKKIR 270
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
699-967 9.31e-26

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 107.69  E-value: 9.31e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVYWLVwrvvvrNKISYFRHAALLNMVFCLLAADTCFL-GAPFLSPGPRSPLclaAA 777
Cdd:cd16006      1 ELLLTVITWVGIVISLVCLAICIFTFCFF------RGLQSDRNTIHKNLCINLFIAEFIFLiGIDKTEYKIACPI---FA 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  778 FLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRvlPLMVLLGYLCPLGLAGVTLGLylPQGQYLREGECWLDGKGGA 857
Cdd:cd16006     72 GLLHFFFLAAFAWMCLEGVQLYLMLVEVFESEYSRK--KYYYVAGYLFPATVVGVSAAI--DYKSYGTEKACWLRVDNYF 147
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  858 LYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLaTLLEEVSTVPHYIF 937
Cdd:cd16006    148 IWSFIGPVTFIILLNLIFLVITLCKMVKHSNTLKPDSSRLENIKSWVLGAFALLCLLGLTWSFGL-LFINEETIVMAYLF 226
                          250       260       270
                   ....*....|....*....|....*....|
gi 1013371133  938 TILNTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd16006    227 TIFNAFQGMFIFIFHCALQKKVRKEYSKCF 256
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
701-966 1.04e-25

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 107.32  E-value: 1.04e-25
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  701 ALALLTQVGLGASILALLVCLGVYWLVWRV-VVRNKiSYFRHAallNMVFCLLAADTCFLGAPFLSPGPRSplCLAAAFL 779
Cdd:cd15256      3 ALSSITYVGCSLSIFCLAITLVTFAVLSSVsTIRNQ-RYHIHA---NLSFAVLVAQILLLISFRFEPGTLP--CKIMAIL 76
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 CHFLYLATFFWMLAQALVLAHQLLFVF-HQLAKHRVLPLMvllGYLCPLGLAGVTLGLYLpqGQYLREGECWLDGKGGAL 858
Cdd:cd15256     77 LHFFFLSAFAWMLVEGLHLYSMVIKVFgSEESKHFYYYGI---GWGSPLLICIISLTSAL--DSYGESDNCWLSLENGAI 151
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  859 YTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLlEEVSTVPHYIFT 938
Cdd:cd15256    152 WAFVAPALFVIVVNIGILIAVTRVISRISADNYKVHGDANAFKLTAKAVAVLLPILGSSWVFGVLAV-NTHALVFQYMFA 230
                          250       260
                   ....*....|....*....|....*...
gi 1013371133  939 ILNTLQGVFILLFGCLMDRKIQEALRKR 966
Cdd:cd15256    231 IFNSLQGFFIFLFHCLLNSEVRAAFKHK 258
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
699-965 3.51e-22

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 97.30  E-value: 3.51e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLGVY-WLVWRVVVRNKISYfrhaallNMVFCLLAADTCFLGApfLSPGPRSPLCLAAA 777
Cdd:cd16007      1 ELLLSVITWVGIVISLVCLAICISTFcFLRGLQTDRNTIHK-------NLCINLFLAELLFLIG--IDKTQYQIACPIFA 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  778 FLCHFLYLATFFWMLAQALVLAHQLLFVFHqlAKHRVLPLMVLLGYLCPLGLAGVTLGLylPQGQYLREGECWLDGKGGA 857
Cdd:cd16007     72 GLLHFFFLAAFSWLCLEGVQLYLMLVEVFE--SEYSRKKYYYLCGYCFPALVVGISAAI--DYRSYGTEKACWLRVDNYF 147
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  858 LYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQAL----LGVIKALLILtpifGLTWGLGLATLLEEvSTVP 933
Cdd:cd16007    148 IWSFIGPVSFVIVVNLVFLMVTLHKMIRSSSVLKPDSSRLDNIkswaLGAITLLFLL----GLTWAFGLLFINKE-SVVM 222
                          250       260       270
                   ....*....|....*....|....*....|..
gi 1013371133  934 HYIFTILNTLQGVFILLFGCLMDRKIQEALRK 965
Cdd:cd16007    223 AYLFTTFNAFQGMFIFIFHCALQKKVHKEYSK 254
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
699-965 1.91e-21

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 95.30  E-value: 1.91e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  699 EPALALLTQVGLGASILALLVCLgVYWLVWRVVVRNKISYFRhaallNMVFCLLAADTcFLGAPFLSPGPRSpLCLAAAF 778
Cdd:cd15255      1 EATLRTLSFIGCGVSLCALIVTF-ILFLAVGVPKSERTTVHK-----NLIFALAAAEF-LLMFSEWAKGNQV-ACWAVTA 72
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMLAQALVLAHQLLFVfhQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLpqGQYLREGECWLDGKGGAL 858
Cdd:cd15255     73 LLHLFFLAAFSWMLVEGLLLWSKVVAV--NMSEDRRMKFYYVTGWGLPVVIVAVTLATSF--NKYVADQHCWLNVQTDII 148
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  859 YTFVGPVLAIIGVNGLVLAMAML----------KLLRPSlsegpPAEKRQALLGV---IKALLILTPIFGLTWglgLATL 925
Cdd:cd15255    149 WAFVGPVLFVLTVNTFVLFRVVMvtvssarrraKMLTPS-----SDLEKQIGIQIwatAKPVLVLLPVLGLTW---LCGV 220
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|
gi 1013371133  926 LEEVSTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRK 965
Cdd:cd15255    221 LVHLSDVWAYVFITLNSFQGLYIFLVYAIYNSEVRNAIQR 260
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
697-964 2.05e-21

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 95.79  E-value: 2.05e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  697 PEEPALALLtqVGLGASILALLVCLGVYWLVWRVvvrnkISYFRHAALLNMVFCLLAADTCFL--GAPFLSPGprspLC- 773
Cdd:cd15988      1 TGSPSVPLM--IGCAVSCMALLILLAIYAAFWRF-----IRSERSIILLNFCLSILASNILILvgQSQTLSKG----VCt 69
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  774 LAAAFLcHFLYLATFFWMLAQALvlaHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGqYLREGECWLDG 853
Cdd:cd15988     70 MTAAFL-HFFFLSSFCWVLTEAW---QSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKG-YGTASYCWLSL 144
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  854 KGGALYTFVGPVLAIIGVNGLVLAMAMLKLL-RPSLSE-------GPPAEKRQALL------GVIKALL----------- 908
Cdd:cd15988    145 EGGLLYAFVGPAAVIVLVNMLIGIIVFNKLMsRDGISDkskkqraGSEAEPCSSLLlkcskcGVVSSAAmssatassama 224
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1013371133  909 ------ILTPIFGLTWGLGLATLLEEVSTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALR 964
Cdd:cd15988    225 slwsscVVLPLLALTWMSAVLAMTDRRSILFQVLFAVFNSVQGFVIITVHCFLRREVQDVVK 286
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
702-967 5.37e-21

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 93.79  E-value: 5.37e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYWLVwrvvvrNKISYFRHAALLNMVFCLLAADTCFLGApfLSPGPRSPLCLAAAFLCH 781
Cdd:cd15437      4 LTRITQLGIIISLICLSMCIFTFWFF------SEIQSTRTTIHKNLCCSLFLAELIFLIG--INMNANKLFCSIIAGLLH 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLYLATFFWMLAQALvlaHQLLFVFHQLAKHRVLPL-MVLLGYLCPLGLAGVTLGLylPQGQYLREGECWLDGKGGALYT 860
Cdd:cd15437     76 YFFLAAFAWMCIEGI---HLYLIVVGVIYNKGFLHKnFYIFGYGSPAVVVGISAAL--GYKYYGTTKVCWLSTENNFIWS 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  861 FVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEvSTVPHYIFTIL 940
Cdd:cd15437    151 FIGPACLIILVNLLAFGVIIYKVFRHTAMLKPEVSCYENIRSCARGALALLFLLGATWIFGVLHVVYG-SVVTAYLFTIS 229
                          250       260
                   ....*....|....*....|....*..
gi 1013371133  941 NTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15437    230 NAFQGMFIFIFLCVLSRKIQEEYYRLF 256
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
700-966 2.01e-20

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 91.93  E-value: 2.01e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  700 PALALLtqVGLGASILALLVCLGVYWLVWRVvvrnkISYFRHAALLNMVFCLLAADTCFLGAPFLSPGpRSPLCLAAAFL 779
Cdd:cd15251      4 PSVTLI--VGCGVSCLALLTLLAIYAAFWRY-----IRSERSIILINFCLSIISSNILILVGQTQTLN-KGVCTMTAAFL 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 cHFLYLATFFWMLAQALvlaHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGqYLREGECWLDGKGGALY 859
Cdd:cd15251     76 -HFFFLSSFCWVLTEAW---QSYMAVTGRMRTRLIRKRFLCLGWGLPALVVAVSVGFTRTKG-YGTSSYCWLSLEGGLLY 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  860 TFVGPVLAIIGVNGLVLAMAMLKLL-RPSLSEgppaekrQALLGVIKALLILtPIFGLTWGLGLATLLEEVSTVPHYIFT 938
Cdd:cd15251    151 AFVGPAAAVVLVNMVIGILVFNKLVsRDGISD-------NAMASLWSSCVVL-PLLALTWMSAVLAMTDRRSVLFQILFA 222
                          250       260
                   ....*....|....*....|....*...
gi 1013371133  939 ILNTLQGVFILLFGCLMDRKIQEALRKR 966
Cdd:cd15251    223 VFDSLQGFVIVMVHCILRREVQDAVKCR 250
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
702-970 1.30e-19

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 89.72  E-value: 1.30e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYwLVWRVVVRN---KIsyfrhaaLLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAF 778
Cdd:cd15997      4 LTLITYLGCGISSIFLGITLVTY-LAFEKLRRDypsKI-------LINLCTALLMLNLVFLLNSWLSSFNNYGLCITVAA 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  779 LCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLmVLLGYLCPLGLAGVTLGL----Y--LPQGQYLREGE--CW 850
Cdd:cd15997     76 FLHYFLLASFTWMGLEAVHMYFALVKVFNIYIPNYILKF-CIAGWGIPAVVVALVLAInkdfYgnELSSDSLHPSTpfCW 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  851 LDGKGGALYTFVGPVLAIIGVNGLVLAMAMLKLlRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLlEEVS 930
Cdd:cd15997    155 IQDDVVFYISVVAYFCLIFLCNISMFITVLIQI-RSMKAKKPSRNWKQGFLHDLKSVASLTFLLGLTWGFAFFAW-GPVR 232
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|
gi 1013371133  931 TVPHYIFTILNTLQGVFILLFGCLMdrkiQEALRKRfCRA 970
Cdd:cd15997    233 IFFLYLFSICNTLQGFFIFVFHCLM----KENVRKQ-WRI 267
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
702-965 1.91e-19

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 89.23  E-value: 1.91e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYWLVwrvvvrNKISYFRHAALLNMVFCLLAADTCFLGApfLSPGPRSPLCLAAAFLCH 781
Cdd:cd16005      4 LDVITWVGILLSLVCLLICIFTFCFF------RGLQSDRNTIHKNLCISLFVAELLFLIG--INRTDQPIACAVFAALLH 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLYLATFFWMLAQALVLAHQLLFVFHqlAKHRVLPLMVLLGYLCPLGLAGVTLGLylPQGQYLREGECWLDGKGGALYTF 861
Cdd:cd16005     76 FFFLAAFTWMFLEGVQLYIMLVEVFE--SEHSRRKYFYLVGYGMPALIVAVSAAV--DYRSYGTDKVCWLRLDTYFIWSF 151
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  862 VGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLaTLLEEVSTVPHYIFTILN 941
Cdd:cd16005    152 IGPATLIIMLNVIFLGIALYKMFHHTAILKPESGCLDNIKSWVIGAIALLCLLGLTWAFGL-MYINESTVIMAYLFTIFN 230
                          250       260
                   ....*....|....*....|....
gi 1013371133  942 TLQGVFILLFGCLMDRKIQEALRK 965
Cdd:cd16005    231 SLQGMFIFIFHCVLQKKVRKEYGK 254
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
702-967 3.33e-19

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 88.37  E-value: 3.33e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLgvywlVWRVVVRNKISYFrHAALLNMVFCLLAADTCFLGAPFLSPGPRspLCLAAAFLCH 781
Cdd:cd15991      4 LKIITYTTVSLSLVALLITF-----ILLVLIRTLRSNL-HSIHKNLVAALFFSELIFLIGINQTENPF--VCTVVAILLH 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLYLATFFWMLAQALVLAHQLLFVFHQLAKHrvLPLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWLDGKGGALYTF 861
Cdd:cd15991     76 YFYMSTFAWMFVEGLHIYRMLTEVRNINTGH--MRFYYVVGWGIPAIITGLAVGLD-PQG-YGNPDFCWLSVQDTLIWSF 151
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  862 VGPVLAIIGVNGLVLAMAMlkllRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTVpHYIFTILN 941
Cdd:cd15991    152 AGPIGIVVIINTVIFVLAA----KASCGRRQRYFEKSGVISMLRTAFLLLLLISATWLLGLMAVNSDTLSF-HYLFAIFS 226
                          250       260
                   ....*....|....*....|....*.
gi 1013371133  942 TLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15991    227 CLQGIFIFFFHCIFNKEVRKHLKNVL 252
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
701-961 1.99e-18

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 86.32  E-value: 1.99e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  701 ALALLTQVGLGASILALLVCLGVYwLVWRVVVRNKISYFrHAALLNMVFCLlaaDTCFLGAPFLSPGPRSPLCLAAAFLC 780
Cdd:cd15258      3 ILTFISYVGCGISAIFLAITILTY-IAFRKLRRDYPSKI-HMNLCAALLLL---NLAFLLSSWIASFGSDGLCIAVAVAL 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  781 HFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLmVLLGYLCP----LGLAGVTLGLYLPQGQYLREGE-----CWL 851
Cdd:cd15258     78 HYFLLACLTWMGLEAFHLYLLLVKVFNTYIRRYILKL-CLVGWGLPallvTLVLSVRSDNYGPITIPNGEGFqndsfCWI 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  852 DGKGGALYTFVGPVLAIIGVNGLVLAMAMLKLLRpsLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEeVST 931
Cdd:cd15258    157 RDPVVFYITVVGYFGLTFLFNMVMLATVLVQICR--LREKAQATPRKRALHDLLTLLGLTFLLGLTWGLAFFAWGP-FNL 233
                          250       260       270
                   ....*....|....*....|....*....|
gi 1013371133  932 VPHYIFTILNTLQGVFILLFGCLMDRKIQE 961
Cdd:cd15258    234 PFLYLFAIFNSLQGFFIFIWYCSMKENVRK 263
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
773-961 1.04e-17

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 84.07  E-value: 1.04e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  773 CLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFHqlAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQgqYLREGECWLD 852
Cdd:cd15436     67 CPIFAGLLHFFFLAAFCWLCLEGVQLYLLLVEVFE--SEYSRRKYFYLCGYSFPALVVAVSAAIDYRS--YGTEKACWLR 142
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  853 GKGGALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEvSTV 932
Cdd:cd15436    143 VDNYFIWSFIGPVTFVITLNLVFLVITLHKMVSHSDLLKPDSSRLDNIKSWALGAIALLFLLGLTWSFGLMFINEE-SVV 221
                          170       180
                   ....*....|....*....|....*....
gi 1013371133  933 PHYIFTILNTLQGVFILLFGCLMDRKIQE 961
Cdd:cd15436    222 MAYLFTIFNAFQGVFIFIFHCALQKKVRK 250
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
700-966 2.52e-17

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 83.12  E-value: 2.52e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  700 PALALLtqVGLGASILALLVCLGVYWLVWRVVVRNkisyfRHAALLNMVFCLLAADTCFLGAPflSPGPRSPLCLAAAFL 779
Cdd:cd15990      7 PSVTLI--VGCGVSSLTLLLLIIIYVSVWRYIRSE-----RSVILINFCLSIISSNALILIGQ--TQTRNKVVCTLVAAF 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 CHFLYLATFFWMLAQALvlaHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGqYLREGECWLDGKGGALY 859
Cdd:cd15990     78 LHFFFLSSFCWVLTEAW---QSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAISVGFTKAKG-YGTVNYCWLSLEGGLLY 153
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  860 TFVGPVLAIIGVNGLVLAMAMLKLL-RPSLSEGPPAEKRQALLGvikALLILTPIFGLTWGLGLATLLEEVSTVPHYIFT 938
Cdd:cd15990    154 AFVGPAAAVVLVNMVIGILVFNKLVsKDGITDKKLKERAGASLW---SSCVVLPLLALTWMSAVLAITDRRSALFQILFA 230
                          250       260
                   ....*....|....*....|....*...
gi 1013371133  939 ILNTLQGVFILLFGCLMDRKIQEALRKR 966
Cdd:cd15990    231 VFDSLEGFVIVMVHCILRREVQDAVKCR 258
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
768-949 5.61e-17

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 83.00  E-value: 5.61e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  768 PRSPLCLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLpLMVLLGYLCPLGLAGVTLGLYLPQGQ----- 842
Cdd:cd15257     88 PDTDVCTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRMMKPLPEMFIL-QASAIGWGIPAVVVAITLGATYRFPTslpvf 166
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  843 ---YLREGECWL-------DGKGGALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEgpPAEKRQALLGVIKALLILTP 912
Cdd:cd15257    167 trtYRQEEFCWLaaldknfDIKKPLLWGFLLPVGLILITNVILFIMTSQKVLKKNNKK--LTTKKRSYMKKIYITVSVAV 244
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1013371133  913 IFGLTWGLGLATLL--EEVSTVPHYIFTILNTLQGV--FIL 949
Cdd:cd15257    245 VFGITWILGYLMLVnnDLSKLVFSYIFCITNTTQGVqiFIL 285
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
700-969 5.85e-17

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 82.27  E-value: 5.85e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  700 PALALLTQVGLGASILALLVCLGVYwLVWR----------------VVVRNKISYFRHAALLNMVFCLLAADTCFLGAPF 763
Cdd:cd15041      2 LVVYYIYLVGYSLSLVALLPAIVIF-LYFRslrctrirlhinlflsFILRAVFWIIWDLLVVYDRLTSSGVETVLMQNPV 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  764 lspgprspLCLAAAFLCHFLYLATFFWMLAQALVLaHQLLFV--FHQLAKhrvLPLMVLLGYlcplGLAGVTLGLYLPQG 841
Cdd:cd15041     81 --------GCKLLSVLKRYFKSANYFWMLCEGLYL-HRLIVVafFSEPSS---LKLYYAIGW----GLPLVIVVIWAIVR 144
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  842 QYLREGECWLDGKGGAL-YTFVGPVLAIIGVNgLVLAMAMLKLLRPSLSEGPPAEKRQALLGViKALLILTPIFGLTWGL 920
Cdd:cd15041    145 ALLSNESCWISYNNGHYeWILYGPNLLALLVN-LFFLINILRILLTKLRSHPNAEPSNYRKAV-KATLILIPLFGIQYLL 222
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1013371133  921 glaTLL-----EEVSTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15041    223 ---TIYrppdgSEGELVYEYFNAILNSSQGFFVAVIYCFLNGEVQSELKRKWSR 273
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
703-969 1.36e-14

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 75.15  E-value: 1.36e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  703 ALLTQVGLGASILALLVCLgVYWLVWRVV--VRNKIsyfrHAALLnmVFCLLAADTCFLGAPFLSP---GPRSPLCLAAA 777
Cdd:cd15264      5 LIIYYLGFSISLVALAVAL-IIFLYFRSLrcLRNNI----HCNLI--VTFILRNVTWFIMQNTLTEihhQSNQWVCRLIV 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  778 FLCHFLYLATFFWMLAQALVLaHQLLFVFHQLAKHRVLPLMVL-LGYLCPLGLAGVTLGLYlpqgqYLREgECWLDGKGG 856
Cdd:cd15264     78 TVYNYFQVTNFFWMFVEGLYL-HTMIVWAYSADKIRFWYYIVIgWCIPCPFVLAWAIVKLL-----YENE-HCWLPKSEN 150
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  857 ALYTFV--GPVLAIIGVNGLVLAmAMLKLLRPSLSEGPPAEKRQALLGViKALLILTPIFGLTWGLGLATLLE-EVSTVP 933
Cdd:cd15264    151 SYYDYIyqGPILLVLLINFIFLF-NIVWVLITKLRASNTLETIQYRKAV-KATLVLLPLLGITYMLFFINPGDdKTSRLV 228
                          250       260       270
                   ....*....|....*....|....*....|....*..
gi 1013371133  934 H-YIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15264    229 FiYFNTFLQSFQGLFVAVFYCFLNGEVRSAIRKKFSR 265
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
700-967 3.12e-14

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 74.34  E-value: 3.12e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  700 PALALLtqVGLGASILALLVCLGVYWLVWRVVVRNkisyfRHAALLNmvFCLLAADTCFLGAPFLSPGPRSPLCLAAAFL 779
Cdd:cd15989      6 PSVTLI--VGCGLSCLALITLAVVYAALWRYIRSE-----RSIILIN--FCLSIISSNILILVGQTQTHNKGICTMTTAF 76
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 CHFLYLATFFWMLAQALvlaHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGqYLREGECWLDGKGGALY 859
Cdd:cd15989     77 LHFFFLASFCWVLTEAW---QSYMAVTGKIRTRLIRKRFLCLGWGLPALVVAISMGFTKAKG-YGTPHYCWLSLEGGLLY 152
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  860 TFVGPVLAIIGVNGLVLAMAMLKLL--------RPSLSEGPPAEKRQALL------GVIKAL-----------------L 908
Cdd:cd15989    153 AFVGPAAAVVLVNMVIGILVFNKLVsrdgildkKLKHRAGQMSEPHSGLTlkcakcGVVSTTalsattasnamaslwssC 232
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1013371133  909 ILTPIFGLTWGLGLATLLEEVSTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15989    233 VVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRL 291
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
701-965 2.55e-13

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 71.40  E-value: 2.55e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  701 ALALLTQVGLGASILALLVCLgVYWLVWRVVVRNKISYFrhaaLLNMVFCLLAADTCFLGAPFLSPGPRSP-LCLAAAFL 779
Cdd:cd15444      3 ILTFITYIGCGLSAIFLSVTL-VTYIAFEKIRRDYPSKI----LIQLCVALLLLNLVFLLDSWIALYKDIVgLCISVAVF 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 CHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLmVLLGYLCPLGLAGVTLGL-----------YLPQGQylREGE 848
Cdd:cd15444     78 LHYFLLVSFTWMGLEAFHMYLALVKVFNTYIRKYILKF-CIVGWGVPAVVVAIVLAVskdnyglgsygKSPNGS--TDDF 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  849 CWLDGKGGALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSlSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLlEE 928
Cdd:cd15444    155 CWINNNIVFYITVVGYFCVIFLLNISMFIVVLVQLCRIK-KQKQLGAQRKTSLQDLRSVAGITFLLGITWGFAFFAW-GP 232
                          250       260       270
                   ....*....|....*....|....*....|....*..
gi 1013371133  929 VSTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRK 965
Cdd:cd15444    233 VNLAFMYLFAIFNTLQGFFIFIFYCVAKENVRKQWRR 269
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
744-965 3.96e-13

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 70.69  E-value: 3.96e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  744 LLNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLlGY 823
Cdd:cd15996     41 LMNLSTALLFLNLVFLLDGWIASFEIDELCITVAVLLHFFLLATFTWMGLEAIHMYIALVKVFNTYIRRYILKFCII-GW 119
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  824 LCPLGLAGVTLGLYLPQGQYLREGECWlDGKGGALYTFV-GPVLAIIGVNG-------LVLAMAMLKLLRPSLSEGPPAE 895
Cdd:cd15996    120 GLPALIVSIVLASTNDNYGYGYYGKDK-DGQGGDEFCWIkNPVVFYVTCAAyfgimflMNVAMFIVVMVQICGRNGKRSN 198
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1013371133  896 K--RQALLGVIKALLILTPIFGLTWGLGLATLlEEVSTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRK 965
Cdd:cd15996    199 RtlREEILRNLRSVVSLTFLLGMTWGFAFFAW-GPVNLAFMYLFTIFNSLQGLFIFVFHCALKENVQKQWRR 269
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
772-962 1.42e-12

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 68.72  E-value: 1.42e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  772 LCLAAAFLCHFLYLATFFWMLAQALVLAHqlLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWL 851
Cdd:cd15993     66 LCTVVAILLHYFFLSTFAWLFVQGLHIYR--MQTEARNVNFGAMRFYYAIGWGVPAIITGLAVGLD-PEG-YGNPDFCWI 141
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  852 DGKGGALYTFVGPVLAIIGVNGLVLAMAmlklLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVST 931
Cdd:cd15993    142 SIHDKLVWSFAGPIVVVIVMNGVMFLLV----ARMSCSPGQKETKKTSVLMTLRSSFLLLLLISATWLFGLLAVNNSVLA 217
                          170       180       190
                   ....*....|....*....|....*....|.
gi 1013371133  932 VpHYIFTILNTLQGVFILLFGCLMDRKIQEA 962
Cdd:cd15993    218 F-HYLHAILCCLQGLAVLLLFCVLNEEVQEA 247
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
703-969 3.75e-12

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 67.78  E-value: 3.75e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  703 ALLTQVGLGASILALLVCLGV--YWLVWRVVvRNKIsyfrHAALlnMVFCLLAADTCFLGAPF-LSPGPRSPLCLAAAFL 779
Cdd:cd15263      5 TTIYFIGYSLSLVALSLALWIflYFKDLRCL-RNTI----HTNL--MFTYILADLTWILTLTLqVSIGEDQKSCIILVVL 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 CHFLYLATFFWMLAQALVLahQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGV-----TLGLYLPQGQYLREGE---CWL 851
Cdd:cd15263     78 LHYFHLTNFFWMFVEGLYL--YMLVVETFSGENIKLRVYAFIGWGIPAVVIVIwaivkALAPTAPNTALDPNGLlkhCPW 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  852 DGKGGALYTFVGPVLAIIGVNGLVLAMAMLKL---LRPSLSegppAEKRQALLGViKALLILTPIFGLTWGLGLATLLEE 928
Cdd:cd15263    156 MAEHIVDWIFQGPAILVLAVNLVFLVRIMWVLitkLRSANT----VETQQYRKAA-KALLVLIPLLGITYILVIAGPTEG 230
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1013371133  929 VSTVP-HYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15263    231 IAANIfEYVRAVLLSTQGFTVALFYCFLNTEVRNTLRHHFER 272
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
645-690 4.01e-12

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 61.55  E-value: 4.01e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 1013371133  645 PHCVFWDHSLFqGRGGWSKEGCQAQVASASPTaQCLCQHLTAFSVL 690
Cdd:pfam01825    1 PQCVFWDFTNS-TTGRWSTEGCTTVSLNDTHT-VCSCNHLTSFAVL 44
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
643-693 2.25e-11

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 59.71  E-value: 2.25e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|.
gi 1013371133   643 GSPHCVFWDHSlfqgRGGWSKEGCQAQVASASpTAQCLCQHLTAFSVLMSP 693
Cdd:smart00303    1 FNPICVFWDES----SGEWSTRGCELLETNGT-HTTCSCNHLTTFAVLMDV 46
7tmB1_GHRHR cd15270
growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane ...
704-969 4.17e-11

growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor (GHRHR) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320398 [Multi-domain]  Cd Length: 268  Bit Score: 64.82  E-value: 4.17e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  704 LLTQVGLGASILALLVCLGVYWLVWRV-VVRNKIsyfrHAALLnmVFCLLAADTCFLGAPFLSPG-------PRSPLCLA 775
Cdd:cd15270      6 IIYTVGYSISIVSLCVAVAILVAFRRLhCPRNYI----HIQLF--FTFILKAIAVFIKDAALFQEddtdhcsMSTVLCKV 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  776 AAFLCHFLYLATFFWMLAQALVLAHQLLFVFhqLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLpqgqYLREGECW-LDGK 854
Cdd:cd15270     80 SVVFCHYCVMTNFFWLLVEAVYLNCLLASSF--PRGKRYFWWLVLLGWGLPTLCTGTWILCKL----YFEDTECWdINND 153
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  855 GGALYTFVGPVLAIIGVNGLVLA---MAMLKLLRPSLSEGPPAEKRQALlgvIKALLILTPIFGLTWgLGLATLLEEVST 931
Cdd:cd15270    154 SPYWWIIKGPIVISVGVNFLLFLniiRILLKKLDPRQINFNNSAQYRRL---SKSTLLLIPLFGTHY-IIFNFLPDYAGL 229
                          250       260       270
                   ....*....|....*....|....*....|....*....
gi 1013371133  932 -VPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15270    230 gIRLYLELCLGSFQGFIVAVLYCFLNQEVQTEISRKWYG 268
7tmB1_calcitonin_R cd15274
calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
701-965 1.53e-10

calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors for calcitonin (CT) and calcitonin gene-related peptides (CGRPs). Calcitonin, a 32-amino acid peptide hormone, is involved in calcium metabolism in many mammalian species and acts to reduce blood calcium levels and directly inhibits bone resorption by acting on osteoclast. Thus, CT acts as an antagonist to parathyroid hormone and is commonly used in the treatment of bone disorders. The CT receptor is predominantly found in osteoclasts, kidney, and brain, and is primarily coupled to stimulatory G(s) protein, which leads to activation of adenylate cyclase, thereby increasing cAMP production. CGRP, a member of the calcitonin family of peptides, is a potent vasodilator and may contribute to migraine. It is expressed in the peripheral and central nervous system and exists in two forms in humans (alpha-CGRP and beta-CGRP). CGRP meditates its physiological effects through calcitonin receptor-like receptor (CRLR) and receptor activity-modifying protein 1 (RAMP1), a single transmembrane domain protein. Thus, the CRLR/RAMP1 complex serves as a functional CGRP receptor. On the other hand, the CRLR/RAMP2 and CRLR/RAMP3 complexes function as adrenomedullin-specific receptors. The CT and CGRP receptors belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide.


Pssm-ID: 341343 [Multi-domain]  Cd Length: 274  Bit Score: 63.26  E-value: 1.53e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  701 ALALLTQVGLGASILALLVCLGVYwLVWRVVVRNKISYFRH---AALLNMVFCLLAADTCFLGAPFLSPGPrsPLCLAAA 777
Cdd:cd15274      3 NLYYLAIVGHSLSIATLLISLGIF-FFFRSLSCQRVTLHKNlflSYILNSIIIIIHLVAVVPNGELVARNP--VSCKILH 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  778 FLCHFLYLATFFWMLAQALVLaHQLLFVFHQLAKHRVLpLMVLLGYLCPLglagVTLGLYLPQGQYLREGECWLDGKGGA 857
Cdd:cd15274     80 FIHQYMMGCNYFWMLCEGIYL-HTLIVVAVFAEKQRLM-WYYLLGWGFPL----IPTTIHAITRAVYYNDNCWLSSETHL 153
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  858 LYTFVGPVLAIIGVNGLVLaMAMLKLLRPSLSEGPPAEKrQALLGVIKALLILTPIFG-----LTWGLGLATLLEevstV 932
Cdd:cd15274    154 LYIIHGPIMAALVVNFFFL-LNIVRVLVTKLRETHEAES-HMYLKAVKATLILVPLLGiqfvlFPWRPSGKILGK----I 227
                          250       260       270
                   ....*....|....*....|....*....|...
gi 1013371133  933 PHYIFTILNTLQGVFILLFGCLMDRKIQEALRK 965
Cdd:cd15274    228 YDYVMHSLIHFQGFFVATIFCFCNGEVQATLKR 260
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
782-969 1.86e-10

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 63.04  E-value: 1.86e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLY-LAT-FFWMLAQALVLaHQLLFVFHqLAKHRVLPLMVLLGYlcplGLAGVTLGLYLPQGQYLREGECWLDGKGGALY 859
Cdd:cd15984    102 FLYfLATnYYWILVEGLYL-HSLIFMAF-FSEKKYLWGFTLFGW----GLPAVFVTIWASVRATLADTGCWDLSAGNLKW 175
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  860 TFVGPVLAIIGVNgLVLAMAMLKLLRPSLSEGPPA--EKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVSTV----- 932
Cdd:cd15984    176 IIQVPILAAIVVN-FILFINIVRVLATKLRETNAGrcDTRQQYRKLLKSTLVLMPLFGVHYIVFMAMPYTEVSGIlwqvq 254
                          170       180       190
                   ....*....|....*....|....*....|....*..
gi 1013371133  933 PHYIFtILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15984    255 MHYEM-LFNSFQGFFVAIIYCFCNGEVQAEIKKSWSR 290
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
781-969 3.05e-10

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 61.87  E-value: 3.05e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  781 HFLYLATFFWMLAQALVLaHQLLFVFHQLAKHRVLpLMVLLGYLCPLGlagVTLGLYLPQGQYLREgECWLDGKGGAL-- 858
Cdd:cd15445     81 NYFHVTNFFWMFGEGCYL-HTAIVLTYSTDKLRKW-MFICIGWCIPFP---IIVAWAIGKLYYDNE-KCWFGKRAGVYtd 154
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  859 YTFVGPVLAIIGVNgLVLAMAMLKLLRPSLSEGPPAEKRQALLGViKALLILTPIFGLTWGLGLATLLE-EVSTVPH-YI 936
Cdd:cd15445    155 YIYQGPMILVLLIN-FIFLFNIVRILMTKLRASTTSETIQYRKAV-KATLVLLPLLGITYMLFFVNPGEdEISRIVFiYF 232
                          170       180       190
                   ....*....|....*....|....*....|...
gi 1013371133  937 FTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15445    233 NSFLESFQGFFVSVFYCFLNSEVRSAVRKRWHR 265
7tmB1_PTH3R cd15983
parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G ...
764-969 5.19e-10

parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 3 receptor (PTH3R), one of the three subtypes of PTH receptor family, is found in chicken and fish, but it is absent in mammals. On the other hand, the PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH1R is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. Conversely, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320649 [Multi-domain]  Cd Length: 285  Bit Score: 61.48  E-value: 5.19e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  764 LSPGPRSPLCLAAAFLCHFLY-LAT-FFWMLAQALVLaHQLLFVFHqLAKHRVLPLMVLLGYlcplGLAGVTLGLYLPQG 841
Cdd:cd15983     79 LSPGTRLQWVGCKVTVTLFLYfLATnHYWILVEGLYL-HSLIFMAF-LSDKNYLWALTIIGW----GLPAVFVSVWASVR 152
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  842 QYLREGECWLDGKGGALYTFVGPVLAIIGVNgLVLAMAMLKLLRPSLSE---GPPaEKRQALLGVIKALLILTPIFGLTW 918
Cdd:cd15983    153 VSLADTQCWDLSAGNLKWIYQVPILAAILVN-FFLFLNIVRVLASKLWEtntGKL-DPRQQYRKLLKSTLVLMPLFGVHY 230
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1013371133  919 GLGLATLLEEVSTV-----PHYIFtILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15983    231 VLFMAMPYTDVTGLlwqiqMHYEM-LFNSSQGFFVAFIYCFCNGEVQAEIKKAWLR 285
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
771-969 1.66e-09

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 59.97  E-value: 1.66e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  771 PLCLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYLPQGQylregeCW 850
Cdd:cd15446     70 VWCRCITTIYNYFVVTNFFWMFVEGCYLHTAIVMTYSTDKLRKWVFLFIGWCIPCPIIVAWAIGKLYYENEQ------CW 143
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  851 LDGKGGAL--YTFVGPVLAIIGVNgLVLAMAMLKLLRPSLSEGPPAEKRQALLGViKALLILTPIFGLTWGLGLATLLEE 928
Cdd:cd15446    144 FGKEPGKYidYIYQGPVILVLLIN-FVFLFNIVRILMTKLRASTTSETIQYRKAV-KATLVLLPLLGITYMLFFVNPGED 221
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1013371133  929 VSTVPHYIF--TILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15446    222 DISQIVFIYfnSFLQSFQGFFVSVFYCFLNGEVRSAARKRWHR 264
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
702-976 3.97e-09

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 58.61  E-value: 3.97e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYwLVWRVVVRNKISYFrHAALLNMVFCLLAAdtcFLGAPFLSPGPRSPLCLAAAFLCH 781
Cdd:cd15443      4 LTYISIVGCSISAAASLLTILLH-FFSRKQPKDSTTRI-HMNLLGSLFLLNGS---FLLSPPLATSQSTWLCRAAAALLH 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVL------LGYLCPLGLAGVTLGLY-LPQGQYLREGE-CWLDG 853
Cdd:cd15443     79 YSLLCCLTWMAIEGFHLYLLLVKVYNIYIRRYVLKLCVLgwglpaLIVLLVLIFKREAYGPHtIPTGTGYQNASmCWITS 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  854 KGGALYTFVGPVLAIIGVNGLVLAMAmLKLLR--PSLSEGPPAEKRQALLGVikalLILTPIFGLTWGLGLATLleEVST 931
Cdd:cd15443    159 SKVHYVLVLGYAGLTSLFNLVVLAWV-VRMLRrlRSRKQELGERARRDWVTV----LGLTCLLGTTWALAFFSF--GVFL 231
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*.
gi 1013371133  932 VPH-YIFTILNTLQGVFILLFGClmdrkiqeaLRKRFCRAQAPSST 976
Cdd:cd15443    232 IPQlFLFTIINSLYGFFICLWYC---------TQRRRSDASAKSST 268
7tmB2_GPR56 cd15995
orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G ...
702-951 4.50e-09

orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR56 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320661  Cd Length: 269  Bit Score: 58.69  E-value: 4.50e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLgVYWLVWRVVVRNKISYFrHAALLNMVFCLlaaDTCFLGAPFLSPGPRSPLCLAAAFLCH 781
Cdd:cd15995      4 LTILTYVGCIISALASVFTI-AFYLCSRRKPRDYTIYV-HMNLLLAIFLL---DTSFLISEPLALTGSEAACRAGGMFLH 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLmVLLGYLCPLGLAGV------------TLGLYLPQGQYLREGEC 849
Cdd:cd15995     79 FSLLACLTWMGIEGYNLYRLVVEVFNTYVPHFLLKL-CAVGWGLPIFLVTLiflvdqdnygpiILAVHRSPEKVTYATIC 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  850 WLDGKGGALYTFVGPVLAIIGVNGLVLAMAMLKLLRpslsegppAEKRQALLGVIKALLILTPIFGLTWGLGLATLLE-E 928
Cdd:cd15995    158 WITDSLISNITNLGLFSLVFLFNMAMLATMVVEILR--------LRPRTHKWSHVLTLLGLSLVLGIPWALAFFSFASgT 229
                          250       260
                   ....*....|....*....|...
gi 1013371133  929 VSTVPHYIFTILNTLQGVFILLF 951
Cdd:cd15995    230 FQLVIVYLFTIINSLQGFLIFLW 252
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
772-969 6.33e-09

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 58.20  E-value: 6.33e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  772 LCLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFhqLAKHRVLPLMVLLGYLCPlglAGVTLGLYLPQGQYLREGeCWL 851
Cdd:cd15271     76 ACKAAVTFFQFCVLANFFWLLVEGMYLQTLLLLTF--TSDRKYFWWYILIGWGAP---SVTVTVWVLTRLQYDNRG-CWD 149
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  852 DGKGGALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALLGVIKALLILTPIFGLTWGLgLATLLEEVST 931
Cdd:cd15271    150 DLESRIWWIIKTPILLSVFVNFLIFINVIRILVQKLKSPDVGGNDTSHYMRLAKSTLLLIPLFGVHYVV-FAFFPEHVGV 228
                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1013371133  932 VPH-YIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15271    229 EARlYFELVLGSFQGFIVALLYCFLNGEVQAEIKKRLGK 267
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
773-969 1.10e-08

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 57.28  E-value: 1.10e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  773 CLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFhqLAKHRVLPLMVLLGYLCPLGLAGVTLGL--YLPqgqyLREGECW 850
Cdd:cd15260     75 CQALHVLLQYFMVCNYFWMFCEGLYLHTVLVVAF--ISEKSLMRWFIAIGWGVPLVITAIYAGVraSLP----DDTERCW 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  851 LDgKGGALYTFVGPVLAIIGVNGLVLAMAM---LKLLRPSLSEGPPAEKRQALlgviKALLILTPIFGLTWGL-----GL 922
Cdd:cd15260    149 ME-ESSYQWILIVPVVLSLLINLIFLINIVrvlLTKLRATSPNPAPAGLRKAV----RATLILIPLLGLQFLLipfrpEP 223
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1013371133  923 ATLLEevsTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15260    224 GAPLE---TIYQYVSALLTSLQGLCVAVLFCFCNGEVIAAIKRKWRR 267
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
702-964 1.11e-08

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 57.14  E-value: 1.11e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLgVYWLVWRVVVRNKISYFRhaallNMVFCLLAADTCFLGApfLSPGPRSPLCLAAAFLCH 781
Cdd:cd15992      4 LKTLTWSSVGVTLGFLLLTF-LFLLCLRALRSNKTSIRK-----NGATALFLSELVFILG--INQADNPFACTVIAILLH 75
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLYLATFFWMLAQALVLAHQLLFVfhQLAKHRVLPLMVLLGYLCPLGLAGVTLGLYlPQGqYLREGECWLDGKGGALYTF 861
Cdd:cd15992     76 FFYLCTFSWLFLEGLHIYRMLSEV--RDINYGPMRFYYLIGWGVPAFITGLAVGLD-PEG-YGNPDFCWLSIYDTLIWSF 151
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  862 VGPVLAIIGVNGLVLAMAMlkllRPSLS-EGPPAEKRQALLGVIKALLILTPIFGLTWGLGLATLLEEVsTVPHYIFTIL 940
Cdd:cd15992    152 AGPVAFAVSMNVFLYILSS----RASCSaQQQSFEKKKGPVSGLRTAFTVLLLVSVTCLLALLSVNSDV-ILFHYLFAGF 226
                          250       260
                   ....*....|....*....|....
gi 1013371133  941 NTLQGVFILLFGCLMDRKIQEALR 964
Cdd:cd15992    227 NCLQGPFIFLSHVVLLKEVRKALK 250
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
745-951 6.73e-08

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 55.19  E-value: 6.73e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  745 LNMVFCLLAADTCFLGAPFLSPGPRSPLCLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLmVLLGYL 824
Cdd:cd15442     46 VNLSSSLLLLNLAFLLNSGVSSRAHPGLCKALGGVTHYFLLCCFTWMAIEAFHLYLLAIKVFNTYIHHYFAKL-CLVGWG 124
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  825 CPLGLAGVT--LGLYlpqGQY-LREGE-------CWLDGKG-GALY-TFVGPVLAIIGVNGLVLAMAMLKLLRPSlSEGP 892
Cdd:cd15442    125 FPALVVTITgsINSY---GAYtIMDMAnrttlhlCWINSKHlTVHYiTVCGYFGLTFLFNTVVLGLVAWKIFHLQ-SATA 200
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  893 PAEKRQALLGVIkALLILTPIFGLTWGLGLATLLEE-VSTVphYIFTILNTLQGVFILLF 951
Cdd:cd15442    201 GKEKCQAWKGGL-TVLGLSCLLGVTWGLAFFTYGSMsVPTV--YIFALLNSLQGLFIFIW 257
7tmB1_GlucagonR-like_1 cd15985
uncharacterized group of glucagon receptor-like proteins, member of the class B family of ...
773-967 2.66e-07

uncharacterized group of glucagon receptor-like proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This group consists of uncharacterized proteins with similarity to members of the glucagon receptor family of G protein-coupled receptors, which include glucagon receptor (GCGR), and glucagon-like peptide-1 receptor (GLP1R), and GLP2R. The glucagon receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320651 [Multi-domain]  Cd Length: 280  Bit Score: 53.40  E-value: 2.66e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  773 CLAAAFLCHFLYLATFFWMLAQALVLAHQLL-FVFHQLAKHRVlplmvllgYLCpLGLaGVTLGLYLP--QGQYLREG-E 848
Cdd:cd15985     87 CRMAQVVMQYCILANHYWFFVEAVYLYKLLIgAVFSEKNYYLL--------YLY-LGW-GTPVLFVVPwmLAKYLKENkE 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  849 CWLDGKGGALYTFVG-PVLAIIGVNgLVLAMAMLKLLRPSL---SEGPPAEKrqalLGVIKALLILTPIFGLTWGLGLAT 924
Cdd:cd15985    157 CWALNENMAYWWIIRiPILLASLIN-LLIFMRILKVILSKLranQKGYADYK----LRLAKATLTLIPLFGIHEVVFIFA 231
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1013371133  925 LLEEVSTVPHYI---FTI-LNTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15985    232 TDEQTTGILRYIkvfFTLfLNSFQGFLVAVLYCFANKEVKSELLKKW 278
7tmB1_GLP2R cd15266
glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G ...
770-967 2.93e-06

glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-2 receptor (GLP2R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor (GCGR) and GLP1R. GLP2R is activated by glucagon-like peptide 2, which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. GLP2R belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320394 [Multi-domain]  Cd Length: 280  Bit Score: 50.13  E-value: 2.93e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  770 SPLCLAAAFLCHFLYLATFFWMLAQALVLaHQLLFVfHQLAKHRVLPLMVLLGYLCPLGLA---GVTLGLYLPQGqylre 846
Cdd:cd15266     84 STSCRVAQVFMHYFVGANYFWLLVEGLYL-HTLLVT-AVLSERRLLKKYMLIGWGTPVLFVvpwGVAKILLENTG----- 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  847 geCW-LDGKGGALYTFVGPVLAIIGVNgLVLAMAMLKLLRPSLSegppAEK---RQALLGVIKALLILTPIFGLTWGLGL 922
Cdd:cd15266    157 --CWgRNENMGIWWIIRGPILLCITVN-FYIFLKILKLLLSKLK----AQQmrfTDYKYRLARSTLVLIPLLGIHEVVFS 229
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1013371133  923 ATLLEEVST----VPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15266    230 FITDEQVEGfsrhIRLFIQLTLSSFQGFLVAVLYCFANGEVKAELKKRW 278
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
363-409 4.91e-06

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 45.05  E-value: 4.91e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1013371133  363 CPED-ASVLTWNVTKAGHVAQAPCPE-----SKRGIVRRLCGADGVWGPVHSS 409
Cdd:pfam02793    4 CPRTwDGILCWPRTPAGETVEVPCPDyfsgfDPRGNASRNCTEDGTWSEHPPS 56
7tmB1_PTHR cd15265
parathyroid hormone receptors, member of the class B family of seven-transmembrane G ...
758-969 4.99e-06

parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to a G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. On the other hand, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. Moreover, the PTH3R is more closely related to the PTH1R than PTH2R. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. The PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320393 [Multi-domain]  Cd Length: 289  Bit Score: 49.30  E-value: 4.99e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  758 FLGAPFLSPGPRSPL--CLAAAFLchFLY-LAT-FFWMLAQALVLaHQLLFV-FhqLAKHRVLPLMVLLGYlcplGLAGV 832
Cdd:cd15265     78 LKSIVEAPPVDKSQYvgCKVAVTL--FLYfLATnYYWILVEGLYL-HSLIFMaF--FSDKKYLWGFTLIGW----GFPAV 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  833 TLGLYLPQGQYLREGECWLDGKGGALYTFVGPVLAIIGVNgLVLAMAMLKLLRPSLSEGPPA--EKRQALLGVIKALLIL 910
Cdd:cd15265    149 FVIPWASVRATLADTRCWDLSAGNYKWIYQVPILAAIVVN-FILFLNIVRVLATKLRETNAGrcDTRQQYRKLAKSTLVL 227
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1013371133  911 TPIFGLTWGLGLATLLEEVST---VPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15265    228 IPLFGVHYIVFMGMPYTEVGLlwqIRMHYELFFNSFQGFFVAIIYCFCNGEVQAEIKKRWER 289
7tmB1_PTH-R_related cd15272
invertebrate parathyroid hormone-related receptors, member of the class B family of ...
700-969 1.13e-05

invertebrate parathyroid hormone-related receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes parathyroid hormone (PTH)-related receptors found in invertebrates such as mollusks and annelid worms. The PTH family receptors are members of the B1 subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. The parathyroid hormone type 1 receptor (PTH1R) is found in all vertebrate species and is activated by two polypeptide ligands: parathyroid hormone (PTH), an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)- protein that in turn activates adenylyl cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple signaling pathways.


Pssm-ID: 320400 [Multi-domain]  Cd Length: 285  Bit Score: 48.15  E-value: 1.13e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  700 PALALLTQVGLGASILALL--VCLGVYWLVWRVVvRNKIsyfrHAALLnmVFCLLAADTCFLGAPFLSPGPRSPLCLAAA 777
Cdd:cd15272      2 PSIRLMYNIGYGLSLVSLLiaVIIMLYFKKLHCP-RNTI----HINLF--VSFILRAVLSFIKENLLVQGVGFPGDVYYD 74
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  778 ------------------FLCHFLY--LATFFWMLAQALVLaHQLLFVFHQLAKHRVLpLMVLLGYLCPLglagVTLGLY 837
Cdd:cd15272     75 sngviefkdegshwecklFFTMFNYilGANYMWIFVEGLYL-HMLIFVAVFSENSRVK-WYILLGWLSPL----LFVLPW 148
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  838 LPQGQYLREGECWlDGKGGALYTFV--GPVLAIIGVNgLVLAMAMLKLLRPSLSEGPPAE-KRQALLGVIKALLILTPIF 914
Cdd:cd15272    149 VFVRATLEDTLCW-NTNTNKGYFWIirGPIVISIAIN-FLFFINIVRVLFTKLKASNTQEsRPFRYRKLAKSTLVLIPLF 226
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1013371133  915 GLTW----GLGLATLLEEVSTVPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15272    227 GVHYmvfvVLPDSMSSDEAELVWLYFEMFFNSFQGFIVALLFCFLNGEVQSEIKKKWQR 285
7tmB1_PTH2R cd15982
parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G ...
782-969 1.60e-05

parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 2 receptor (PTH2R), one of the three subtypes of PTH receptor family, is found in mammals and fish, but not in chicken or frog. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39) but not by PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs. These results suggest that TIP-39 is a natural ligand for PTH2R. Conversely, PTH1R is activated by PTH and PTHrP, but not by TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320648 [Multi-domain]  Cd Length: 289  Bit Score: 48.01  E-value: 1.60e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  782 FLY-LAT-FFWMLAQALVLaHQLLFVFHqLAKHRVLPLMVLLGYlcplGLAGVTLGLYLPQGQYLREGECWLDGKGGALY 859
Cdd:cd15982    102 FIYfLATnYYWILVEGLYL-HSLIFVAF-FSDTKYLWGFTLIGW----GFPAVFVAAWAVVRATLADARCWELSAGDIKW 175
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  860 TFVGPVLAIIGVNgLVLAMAMLKLLRPSLSEGPPA--EKRQALLGVIKALLILTPIFGLTW--GLGLATLLEEVS-TVPH 934
Cdd:cd15982    176 IYQAPILAAIGLN-FILFLNTVRVLATKIWETNAVgyDTRKQYRKLAKSTLVLVLVFGVHYivFVCLPHTFTGLGwEIRM 254
                          170       180       190
                   ....*....|....*....|....*....|....*
gi 1013371133  935 YIFTILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15982    255 HCELFFNSFQGFFVSIIYCYCNGEVQTEIKKTWTR 289
7tmB1_Secretin_R-like cd15930
secretin receptor-like group of hormone receptors, member of the class B family of ...
773-967 1.91e-05

secretin receptor-like group of hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents G protein-coupled receptors for structurally similar peptide hormones that include secretin, growth-hormone-releasing hormone (GHRH), pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptors, which are expressed in the brain, pancreas, stomach, kidney, and liver. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. All B1 subfamily GPCRs are able to increase intracellular cAMP levels by coupling to adenylate cyclase via a stimulatory Gs protein. However, depending on its cellular location, some members of subfamily B1 are also capable of coupling to additional G proteins such as G(i/o) and/or G(q) proteins, thereby leading to activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320596 [Multi-domain]  Cd Length: 268  Bit Score: 47.43  E-value: 1.91e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  773 CLAAAFLCHFLYLATFFWMLAQALVLaHQLLFV--FHQlakHRVLPLMVLLGYlcplGLAGVTLGLYLPQGQYLREGECW 850
Cdd:cd15930     77 CKASMVFFQYCVMANFFWLLVEGLYL-HTLLVIsfFSE---RRYFWWYVLIGW----GAPTVFVTVWIVARLYFEDTGCW 148
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  851 LDGKGGALYTFV-GPVLAIIGVNgLVLAMAMLKLLRPSL-SEGPPAEKRQALLGVIKALLILTPIFGLTWGLgLATLLEE 928
Cdd:cd15930    149 DINDESPYWWIIkGPILISILVN-FVLFINIIRILLQKLrSPDIGGNESSQYKRLARSTLLLIPLFGIHYIV-FAFFPEN 226
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1013371133  929 VSTVPHYIFTI-LNTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15930    227 ISLGIRLYFELcLGSFQGFVVAVLYCFLNGEVQAEIKRKW 266
7tmB1_GlucagonR-like cd15929
glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G ...
702-969 2.18e-05

glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents the glucagon receptor family of G protein-coupled receptors, which includes glucagon receptor (GCGR), glucagon-like peptide-1 receptor (GLP1R), GLP2R, and closely related receptors. These receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341353 [Multi-domain]  Cd Length: 279  Bit Score: 47.43  E-value: 2.18e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  702 LALLTQVGLGASILALLVCLGVYWLVWRV-VVRNKIsyfrHAALLnMVFCLLAADTCFLGAPFLSPGPRSPL-------- 772
Cdd:cd15929      4 LQVMYTVGYSLSLAALVLALAILLGLRKLhCTRNYI----HANLF-ASFILRALSVLVKDALLPRRYSQKGDqdlwstll 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  773 -------CLAAAFLCHFLYLATFFWMLAQALVLaHQLLfVFHQLAKHRVLPLMVLLGYlcplglaGVTLGLYLPQG--QY 843
Cdd:cd15929     79 snqaslgCRVAQVLMQYCVAANYYWLLVEGLYL-HTLL-VLAVFSERSIFRLYLLLGW-------GAPVLFVVPWGivKY 149
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  844 LREGE-CW-LDGKGGALYTFVGPVLAIIGVNGLVLaMAMLKLLRPSLsEGPPAEKRQALLGVIKALLILTPIFGLTWGLG 921
Cdd:cd15929    150 LYENTgCWtRNDNMAYWWIIRLPILLAILINFFIF-VRILKILVSKL-RANQMCKTDYKFRLAKSTLTLIPLLGVHEVVF 227
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1013371133  922 LATLLEEVSTVPHYI---FTI-LNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15929    228 AFVTDEQARGTLRFIklfFELfLSSFQGLLVAVLYCFANKEVQSELRKKWHR 279
7tmB1_secretin cd15275
secretin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
708-969 7.41e-05

secretin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Secretin receptor is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include vasoactive intestinal peptide (VIP), growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors, and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptor, which is expressed in the brain, pancreas, stomach, kidney, and liver.


Pssm-ID: 320403 [Multi-domain]  Cd Length: 271  Bit Score: 45.50  E-value: 7.41e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  708 VGLGASILALLVCLGVYWLVWRV-VVRNKIsyfrHAALLnmVFCLLAADTCFLGAPFLSPG-------PRSPLCLAAAFL 779
Cdd:cd15275     10 VGYSVSLVSLAIALAILCSFRRLhCTRNYI----HMQLF--LSFILRAISIFIKDAVLFSSeddnhcdIYTVGCKVAMVF 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  780 CHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHrvLPLMVLLGYLCP-LGLAGVTLGLYLpqgqYLREGeCW-LDGKGGA 857
Cdd:cd15275     84 SNYCIMANYSWLLVEGLYLHSLLSISFFSERKH--LWWYIALGWGSPlIFIISWAIARYL----HENEG-CWdTRRNAWI 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  858 LYTFVGPVLAIIGVNgLVLAMAMLKLLRPSLS--EGPPAEKRQaLLGVIKALLILTPIFGLTWGLgLATLLEEVSTVPHY 935
Cdd:cd15275    157 WWIIRGPVILSIFVN-FILFLNILRILMRKLRapDMRGNEFSQ-YKRLAKSTLLLIPLFGLHYIL-FAFFPEDVSSGTME 233
                          250       260       270
                   ....*....|....*....|....*....|....*...
gi 1013371133  936 IFTI----LNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15275    234 IWLFfelaLGSFQGFVVAVLYCFLNGEVQLEIQRKWRR 271
HormR smart00008
Domain present in hormone receptors;
363-411 1.42e-04

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 40.96  E-value: 1.42e-04
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1013371133   363 CPED-ASVLTWNVTKAGHVAQAPCPESKRGI-----VRRLCGADGVWGPVHSS---CT 411
Cdd:smart00008    5 CPATwDGIICWPQTPAGQLVEVPCPKYFSGFsyktgASRNCTENGGWSPPFPNysnCT 62
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
773-967 3.15e-04

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 43.64  E-value: 3.15e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  773 CLAAAFLCHFLYLATFFWMLAQALVLaHQLLFVFhqLAKHRVLPLMVLLGYlcplGLAGVTLGLYLPQGQYLREGECW-L 851
Cdd:cd15986     79 CKVSLVILQYCIMANFYWLLVEGLYL-HTLLVVI--FSENRHFIVYLLIGW----GIPTVFIIAWIVARIYLEDTGCWdT 151
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  852 DGKGGALYTFVGPVLAIIGVNGL----VLAMAMLKLLRPSLSEGPPAE-KRQAllgviKALLILTPIFGLTWglgLATLL 926
Cdd:cd15986    152 NDHSVPWWVIRIPIIISIILNFIlfisIIRILLQKLRSPDVGGNDQSQyKRLA-----KSTLLLIPLFGVHY---IVFVY 223
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1013371133  927 EEVSTVPHY--IFTI-LNTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15986    224 FPDSSSSNYqiFFELcLGSFQGLVVAILYCFLNSEVQGELKRKW 267
7tmB1_VIP-R1 cd15269
vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of ...
773-969 6.03e-04

vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 1 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320397 [Multi-domain]  Cd Length: 268  Bit Score: 42.92  E-value: 6.03e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  773 CLAAAFLCHFLYLATFFWMLAQALVLaHQLLFVFHqLAKHRVLPLMVLLGYlcplGLAGVTLGLYLPQGQYLREGECWLD 852
Cdd:cd15269     77 CKAAMVFFQYCIMANFFWLLVEGLYL-HTLLAVSF-FSERKYFWWYILIGW----GAPSVFITAWSVARIYFEDVGCWDT 150
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  853 GKGGALYTFV-GPVLAIIGVNgLVLAMAMLKLLRPSLSegPPAEKRQ---ALLGVIKALLILTPIFGLTWgLGLATLLEE 928
Cdd:cd15269    151 IIESLLWWIIkTPILVSILVN-FILFICIIRILVQKLH--SPDIGRNessQYSRLAKSTLLLIPLFGIHY-IMFAFFPDN 226
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1013371133  929 VSTVPHYIFT-ILNTLQGVFILLFGCLMDRKIQEALRKRFCR 969
Cdd:cd15269    227 FKAEVKLVFElILGSFQGFVVAVLYCFLNGEVQAELKRKWRR 268
7tmB1_NPR_B3_insect-like cd15262
insect neuropeptide receptor subgroup B3 and related proteins belong to subfamily B1 of ...
773-967 1.34e-03

insect neuropeptide receptor subgroup B3 and related proteins belong to subfamily B1 of hormone receptors; member of the class B secretin-like seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Bombyx mori (silk worm) and its closely related proteins from arthropods. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320390 [Multi-domain]  Cd Length: 270  Bit Score: 41.66  E-value: 1.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  773 CLAAAFLCHFLYLATFFWMLAQALVLAHQLLFVFHQLAKHRVLPLMVLLGYLCPLGLAGVTLGLylpqgqyLREGECWLD 852
Cdd:cd15262     82 CRLLSIFERAARNAVFACMFVEGFYLHRLIVAVFAEKSSIRFLYVIGAVLPLFPVIIWAIIRAL-------HNDHSCWVV 154
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013371133  853 GKGGALYTFVGPVLAIIGVNGLVLAMAMLKLLRPSLSEGPPAEKRQALlgviKALLILTPIFGLTWglgLATLLEEVST- 931
Cdd:cd15262    155 DIEGVQWVLDTPRLFILLVNTVLLVDIIRVLVTKLRNTEENSQTKSTT----RATLFLVPLFGLHF---VITAYRPSTDd 227
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1013371133  932 -----VPHYIFTILNTLQGVFILLFGCLMDRKIQEALRKRF 967
Cdd:cd15262    228 cdwedIYYYANYLIEGLQGFLVAILFCYINKEVHYLIKNTY 268
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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