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Concise Results
Standard Results
Full Results
janus kinase and microtubule-interacting protein 3 isoform b [Homo sapiens]
Protein Classification
SMC_prok_B and JAKMIP_CC3 domain-containing protein ( domain architecture ID 13531091 )
SMC_prok_B and JAKMIP_CC3 domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-625
5.09e-86
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 272.14
E-value: 5.09e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 508 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 587
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1019366892 588 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 625
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B super family
cl37069 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-820
8.22e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
TIGR02168 :Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 59.69
E-value: 8.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 265 relphaagagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L 344
Cdd:TIGR02168 425 ----------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 345 SRKNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYV 424
Cdd:TIGR02168 488 QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKA 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 425 KSV L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEG 492
Cdd:TIGR02168 562 IAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 493 MA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE V ktr E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK 565
Cdd:TIGR02168 635 LE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE I --- E E L EEKIEELEEK I AE LEKALAE lrk ELEELE 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 566 wi EE KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E A 645
Cdd:TIGR02168 712 -- EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E E 772
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 646 EGVTDIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D 725
Cdd:TIGR02168 773 AEEELAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S 851
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 726 E ELDYRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L 805
Cdd:TIGR02168 852 E DIESLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L 929
810
....*....|....*
gi 1019366892 806 AQQRIKELEERIEAQ 820
Cdd:TIGR02168 930 RLEGLEVRIDNLQER 944
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-625
5.09e-86
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 272.14
E-value: 5.09e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 508 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 587
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1019366892 588 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 625
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-820
8.22e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 59.69
E-value: 8.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 265 relphaagagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L 344
Cdd:TIGR02168 425 ----------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 345 SRKNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYV 424
Cdd:TIGR02168 488 QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKA 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 425 KSV L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEG 492
Cdd:TIGR02168 562 IAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 493 MA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE V ktr E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK 565
Cdd:TIGR02168 635 LE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE I --- E E L EEKIEELEEK I AE LEKALAE lrk ELEELE 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 566 wi EE KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E A 645
Cdd:TIGR02168 712 -- EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E E 772
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 646 EGVTDIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D 725
Cdd:TIGR02168 773 AEEELAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S 851
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 726 E ELDYRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L 805
Cdd:TIGR02168 852 E DIESLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L 929
810
....*....|....*
gi 1019366892 806 AQQRIKELEERIEAQ 820
Cdd:TIGR02168 930 RLEGLEVRIDNLQER 944
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
495-823
5.76e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 56.87
E-value: 5.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 495 K E ET EL RFRQ L TMEYQA L QRAYAL L QEQVG - GTLDA E REVKTREQ L Q AE VQRAQARI E D LE KA L A E - Q GQDMKWIE E KQA 572
Cdd:COG1196 220 E E LK EL EAEL L LLKLRE L EAELEE L EAELE e LEAEL E ELEAELAE L E AE LEELRLEL E E LE LE L E E a Q AEEYELLA E LAR 299
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 573 L YRRNQE L V E KIKQM E TEEAR L RH E VQDARDQN E L LE FRIL ELEE RE rkspaisfhhtpfvdgksplqvyceaegvtdiv 652
Cdd:COG1196 300 L EQDIAR L E E RRREL E ERLEE L EE E LAELEEEL E E LE EELE ELEE EL --------------------------------- 346
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 653 v A E LMKK L D ilgdnavsnltn E EQVVVIQ A RTV L TL AE KW L QQI EE TEAA L QRKMVDLESEKELFSK Q KGY L D E ELDYRK 732
Cdd:COG1196 347 - E E AEEE L E ------------ E AEAELAE A EEA L LE AE AE L AEA EE ELEE L AEELLEALRAAAELAA Q LEE L E E AEEALL 413
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 733 QA L DQANKHIL ELE AM L YDALQQ E AGAKV A ELLSE EE REK L KVAV E Q w KRQVMS EL R E RD A QILRERM ELL QLAQQRIKE 812
Cdd:COG1196 414 ER L ERLEEELE ELE EA L AELEEE E EEEEE A LEEAA EE EAE L EEEE E A - LLELLA EL L E EA A LLEAALA ELL EELAEAAAR 492
330
....*....|.
gi 1019366892 813 L EERI EA QKRQ 823
Cdd:COG1196 493 L LLLL EA EADY 503
PTZ00121
PTZ00121 MAEBL; Provisional
50-621
1.37e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.44
E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 50 E RE K NQEL R QVREHEQHKTAVLLT E LKTKLHEE K MKELQAVR E T ll RQHEA E LLRVIKIKD NE NQ R lqalls ALRDGGPE 129
Cdd:PTZ00121 1192 E LR K AEDA R KAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE E A -- KKDAE E AKKAEEERN NE EI R ------ KFEEARMA 1263
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 130 KVKTVLLSEAK EEA K K GF E VE K VKMQQEIS E L K G A -- K RQVE EA ltlviqad K I KA A E IRSV yhlhq E E ITRIKK E CERE 207
Cdd:PTZ00121 1264 HFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee K KKAD EA -------- K K KA E E AKKA ----- D E AKKKAE E AKKK 1330
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 208 IRRLMEEIKFKDR A VFVLER E LGVQ A GH A QRLQLQK EA LDEQLSQVREADRHPGSPRR E LPH A AG A GDASDHSGSPEQQ L 287
Cdd:PTZ00121 1331 ADAAKKKAEEAKK A AEAAKA E AEAA A DE A EAAEEKA EA AEKKKEEAKKKADAAKKKAE E KKK A DE A KKKAEEDKKKADE L 1410
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 288 DEKD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRVRE AE SQY K PLLD K N K RLSR K NE D LSHALRRMEN K LKFVTQ 367
Cdd:PTZ00121 1411 KKAA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K AEEA K KA D EAKKKAEEAK K ADEAKK 1490
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 368 ENI E MRQR A GIIRRPSS ---- LNDLDQSQDEREV D fl KLQIV E QQNLI DE LS K TL E tagy V K SVL E RD K LLRFR K QRK K M 443
Cdd:PTZ00121 1491 KAE E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K AE E ---- K K KAD E LK K AEELK K AEE K K 1564
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 444 A klpkpvv V E TFFGYD E EASLESDGSSVSYQTDRTDQTPCTPDDDL E EG M AK EE TE l RFRQLTMEYQA L QR A YALLQEQV 523
Cdd:PTZ00121 1565 K ------- A E EAKKAE E DKNMALRKAEEAKKAEEARIEEVMKLYEE E KK M KA EE AK - KAEEAKIKAEE L KK A EEEKKKVE 1636
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 524 GGTLDAER E V K TR E Q L QAEVQRAQARIEDLE K ALA E --- QGQDM K WI EE K ----- Q AL YRRNQ E L -- V E KI K QM E T EE AR 593
Cdd:PTZ00121 1637 QLKKKEAE E K K KA E E L KKAEEENKIKAAEEA K KAE E dkk KAEEA K KA EE D ekkaa E AL KKEAE E A kk A E EL K KK E A EE KK 1716
570 580
....*....|....*....|....*...
gi 1019366892 594 LRH E VQD A RDQ N ELLEFRILELE E RER K 621
Cdd:PTZ00121 1717 KAE E LKK A EEE N KIKAEEAKKEA E EDK K 1744
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
496-620
2.74e-03
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 41.44
E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 496 E E T E LRFRQLTMEYQ AL QRAYAL LQE Q vggt LD A EREVKTREQLQAE V QR A QAR I ED LE KA L AEQGQDMKWI ---- E EKQ 571
Cdd:COG4913 620 A E L E EELAEAEERLE AL EAELDA LQE R ---- RE A LQRLAEYSWDEID V AS A ERE I AE LE AE L ERLDASSDDL aale E QLE 695
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1019366892 572 A L YRRNQ EL V E KIKQMET E EA RL RH E VQD A RDQNEL L EF R ILEL E ERE R 620
Cdd:COG4913 696 E L EAELE EL E E ELDELKG E IG RL EK E LEQ A EEELDE L QD R LEAA E DLA R 744
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-625
5.09e-86
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 272.14
E-value: 5.09e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 508 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 587
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1019366892 588 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 625
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-820
8.22e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 59.69
E-value: 8.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 265 relphaagagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L 344
Cdd:TIGR02168 425 ----------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 345 SRKNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYV 424
Cdd:TIGR02168 488 QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKA 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 425 KSV L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEG 492
Cdd:TIGR02168 562 IAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 493 MA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE V ktr E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK 565
Cdd:TIGR02168 635 LE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE I --- E E L EEKIEELEEK I AE LEKALAE lrk ELEELE 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 566 wi EE KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E A 645
Cdd:TIGR02168 712 -- EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E E 772
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 646 EGVTDIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D 725
Cdd:TIGR02168 773 AEEELAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S 851
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 726 E ELDYRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L 805
Cdd:TIGR02168 852 E DIESLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L 929
810
....*....|....*
gi 1019366892 806 AQQRIKELEERIEAQ 820
Cdd:TIGR02168 930 RLEGLEVRIDNLQER 944
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
495-823
5.76e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 56.87
E-value: 5.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 495 K E ET EL RFRQ L TMEYQA L QRAYAL L QEQVG - GTLDA E REVKTREQ L Q AE VQRAQARI E D LE KA L A E - Q GQDMKWIE E KQA 572
Cdd:COG1196 220 E E LK EL EAEL L LLKLRE L EAELEE L EAELE e LEAEL E ELEAELAE L E AE LEELRLEL E E LE LE L E E a Q AEEYELLA E LAR 299
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 573 L YRRNQE L V E KIKQM E TEEAR L RH E VQDARDQN E L LE FRIL ELEE RE rkspaisfhhtpfvdgksplqvyceaegvtdiv 652
Cdd:COG1196 300 L EQDIAR L E E RRREL E ERLEE L EE E LAELEEEL E E LE EELE ELEE EL --------------------------------- 346
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 653 v A E LMKK L D ilgdnavsnltn E EQVVVIQ A RTV L TL AE KW L QQI EE TEAA L QRKMVDLESEKELFSK Q KGY L D E ELDYRK 732
Cdd:COG1196 347 - E E AEEE L E ------------ E AEAELAE A EEA L LE AE AE L AEA EE ELEE L AEELLEALRAAAELAA Q LEE L E E AEEALL 413
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 733 QA L DQANKHIL ELE AM L YDALQQ E AGAKV A ELLSE EE REK L KVAV E Q w KRQVMS EL R E RD A QILRERM ELL QLAQQRIKE 812
Cdd:COG1196 414 ER L ERLEEELE ELE EA L AELEEE E EEEEE A LEEAA EE EAE L EEEE E A - LLELLA EL L E EA A LLEAALA ELL EELAEAAAR 492
330
....*....|.
gi 1019366892 813 L EERI EA QKRQ 823
Cdd:COG1196 493 L LLLL EA EADY 503
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-619
1.03e-07
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 55.71
E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 26 ED L R A K L TDIQIELQQEKSKVSKV E R E KNQELRQVR E H E QHKTAVL L T EL KTK L H E EK m K EL QAVRET l LRQHE AEL L R V 105
Cdd:COG1196 223 KE L E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAE L E EL RLE L E E LE - L EL EEAQAE - EYELL AEL A R L 300
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 106 IKIKDNENQ R LQA L LSA L RD ggpekvktvl L S E AKE E AKKGF E VEKVKMQQEIS EL KG A KRQV EEA LTLVIQ A DKIKAAE 185
Cdd:COG1196 301 EQDIARLEE R RRE L EER L EE ---------- L E E ELA E LEEEL E ELEEELEELEE EL EE A EEEL EEA EAELAE A EEALLEA 370
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 186 IRS vyhlh QE E ITRIKK E CER E IRRLMEEIKFKDRAVFV LE RELGVQAGHAQ RL QLQK E A L D E Q L SQVR E ADR hpgsprr 265
Cdd:COG1196 371 EAE ----- LA E AEEELE E LAE E LLEALRAAAELAAQLEE LE EAEEALLERLE RL EEEL E E L E E A L AELE E EEE ------- 438
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 266 elphaagagdasdhsgsp E QQLDEKD A RRFQLKIA E LSAIIRK L EDRNALLSEERNEL L KRVR E AESQYKPL L DKNKRLS 345
Cdd:COG1196 439 ------------------ E EEEALEE A AEEEAELE E EEEALLE L LAELLEEAALLEAA L AELL E ELAEAAAR L LLLLEAE 500
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 346 RKN E DLSHALRRMENK lkfvtqeniem RQRA G IIRRPSS L NDLDQS qd EREVDFLK L QIVE Q QNLIDELSKTLETAG Y V K 425
Cdd:COG1196 501 ADY E GFLEGVKAALLL ----------- AGLR G LAGAVAV L IGVEAA -- YEAALEAA L AAAL Q NIVVEDDEVAAAAIE Y L K 567
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 426 S - VLE R DKL L RFR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSVS Y Q - T D RTDQTPCTPDDDLEEGMAKEETEL R F R 503
Cdd:COG1196 568 A a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y V l G D TLLGRTLVAARLEAALRRAVTLAG R L R 647
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 504 QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE VQRAQARIEDLEKALA E QGQDMKWIE E KQA L YRRNQ E LVEK 583
Cdd:COG1196 648 EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E EER L EEELE E EALE 727
570 580 590
....*....|....*....|....*....|....*.
gi 1019366892 584 IKQMETE E AR L RHEVQDARDQN E LLEFRIL E LEER E 619
Cdd:COG1196 728 EQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
45-819
2.07e-06
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 51.61
E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 45 KVSKVER EK N Q E L RQV R EHEQHKTAVL lt E L KTKLH E EKMK EL QAVR E T L L RQ H EA e LL R VIKIKDN E NQR L QALL S A L R 124
Cdd:TIGR02169 188 RLDLIID EK R Q Q L ERL R REREKAERYQ -- A L LKEKR E YEGY EL LKEK E A L E RQ K EA - IE R QLASLEE E LEK L TEEI S E L E 264
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 125 DGGP E KVK tv LL S E AKEEA K KGF E V E KVKMQQE I S EL KG ---- AK R QVE E ALTLVIQ A DK i KA A EIRSVYHLHQE EI TRI 200
Cdd:TIGR02169 265 KRLE E IEQ -- LL E E LNKKI K DLG E E E QLRVKEK I G EL EA eias LE R SIA E KERELED A EE - RL A KLEAEIDKLLA EI EEL 341
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 201 KK E C E R E IR R --- L M EE IKFKDRAVFV L ER EL GVQAGHAQRLQLQKEALD E Q L SQVRE adrhpgsprrelphaagag DAS 277
Cdd:TIGR02169 342 ER E I E E E RK R rdk L T EE YAELKEELED L RA EL EEVDKEFAETRDELKDYR E K L EKLKR ------------------- EIN 402
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 278 DHSGSPEQQLD E K da R R FQLKI A E L S A I I RKL E DRNAL L S EE RNELLKRVREA E SQYKP L LDKNKRLSRKNE DL SHALR R 357
Cdd:TIGR02169 403 ELKRELDRLQE E L -- Q R LSEEL A D L N A A I AGI E AKINE L E EE KEDKALEIKKQ E WKLEQ L AADLSKYEQELY DL KEEYD R 480
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 358 M E NK L KFVTQ E NI E MRQR A GIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTL E T A G ------- Y V KSVLER 430
Cdd:TIGR02169 481 V E KE L SKLQR E LA E AEAQ A RASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAI E V A A gnrlnnv V V EDDAVA 560
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 431 DKLLRFR K Q RK ---------- KM AKLPKPVVVETFF G YDEE A ---- SLESDGSSVSYQTDRTDQTP ctpd D D L E EG mak E 496
Cdd:TIGR02169 561 KEAIELL K R RK agratflpln KM RDERRDLSILSED G VIGF A vdlv EFDPKYEPAFKYVFGDTLVV ---- E D I E AA --- R 633
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 497 ETELRF R QL T M E YQALQRAY A L lqeq V GG TLDAEREVKTREQLQ AE V QR AQA R I E D L EKA L AEQGQDMKW IE ek QA L YRR 576
Cdd:TIGR02169 634 RLMGKY R MV T L E GELFEKSG A M ---- T GG SRAPRGGILFSRSEP AE L QR LRE R L E G L KRE L SSLQSELRR IE -- NR L DEL 707
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 577 N QEL VEKIKQMETE E ARLRHEV Q DARDQN E L LE FRILE L EER E RKSPAI sfhhtpfvdg KS P L Q vyc E A E GVTDIVVAE L 656
Cdd:TIGR02169 708 S QEL SDASRKIGEI E KEIEQLE Q EEEKLK E R LE ELEED L SSL E QEIENV ---------- KS E L K --- E L E ARIEELEED L 774
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 657 M K KLDI L G D NAVSNLTNEEQVVVIQARTVLTLAEKWLQQIE E T E AA L Q R KMVD --- LE S E KELFSK Q KGY L D E ELDYRKQ 733
Cdd:TIGR02169 775 H K LEEA L N D LEARLSHSRIPEIQAELSKLEEEVSRIEARLR E I E QK L N R LTLE key LE K E IQELQE Q RID L K E QIKSIEK 854
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 734 ALDQA N KHIL ELE AM L -- YD A LQQEAGAKVAE L LS E EEREKLKVAVEQW K RQVMSELR E RDAQI L R E RMEL L QLAQQRIK 811
Cdd:TIGR02169 855 EIENL N GKKE ELE EE L ee LE A ALRDLESRLGD L KK E RDELEAQLRELER K IEELEAQI E KKRKR L S E LKAK L EALEEELS 934
....*...
gi 1019366892 812 E L E ERIEA 819
Cdd:TIGR02169 935 E I E DPKGE 942
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-595
6.08e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 46.85
E-value: 6.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 26 E D L R A K L TDIQI EL QQEKSKV skve R E KNQ EL RQVREH E QHKT A V L LTELKTKLHE E KMKELQAV R ETL L RQHE AEL LRV 105
Cdd:COG1196 256 E E L E A E L AELEA EL EELRLEL ---- E E LEL EL EEAQAE E YELL A E L ARLEQDIARL E ERRRELEE R LEE L EEEL AEL EEE 331
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 106 I kik DNENQR L QA L LSA L RDGGP E KVKTVLLSEAK EEA KKGF E V E KVKMQQ E IS EL KG ---- A K R QVE E ALTLVIQADKI 181
Cdd:COG1196 332 L --- EELEEE L EE L EEE L EEAEE E LEEAEAELAEA EEA LLEA E A E LAEAEE E LE EL AE elle A L R AAA E LAAQLEELEEA 408
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 182 KA A EIRSVYH L HQ E EITRIKKEC E R E IRRLM EE IKFKDR A VFVL E R E LGVQ A GHAQRLQ L QK E - AL D E QLSQVREADRHP 260
Cdd:COG1196 409 EE A LLERLER L EE E LEELEEALA E L E EEEEE EE EALEEA A EEEA E L E EEEE A LLELLAE L LE E a AL L E AALAELLEELAE 488
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 261 GSP R RE L PHA A G A GDASDHS G SPEQQ L DEKDARRFQLKIAELSAIIRKLEDRN A L L SEERNELLKRVR E AESQYKPL L d K 340
Cdd:COG1196 489 AAA R LL L LLE A E A DYEGFLE G VKAAL L LAGLRGLAGAVAVLIGVEAAYEAALE A A L AAALQNIVVEDD E VAAAAIEY L - K 567
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 341 NKRLS R KNEDLSHAL R R menklkfv TQENIEMRQ R AG I IRRPSSLNDLDQSQ D E R EVDFLKLQIVEQQNLIDELSKTLET 420
Cdd:COG1196 568 AAKAG R ATFLPLDKI R A -------- RAALAAALA R GA I GAAVDLVASDLREA D A R YYVLGDTLLGRTLVAARLEAALRRA 639
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 421 AGYVKSVL E RDKLLRFRKQRKKMAKLPKPVVVETFFGYDE E ASLESDGSSVSYQTDRTDQTPCTPDDDLEEGMAK E ET E L 500
Cdd:COG1196 640 VTLAGRLR E VTLEGEGGSAGGSLTGGSRRELLAALLEAEA E LEELAERLAEEELELEEALLAEEEEERELAEAEE E RL E E 719
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 501 RFRQLTM E Y Q ALQRAYA LL Q E QVGGTLDA E R E VKTREQLQAEVQRAQARI E D LE KALAEQ G Q - DMKW IEE KQA L YR R NQE 579
Cdd:COG1196 720 ELEEEAL E E Q LEAEREE LL E E LLEEEELL E E E ALEELPEPPDLEELEREL E R LE REIEAL G P v NLLA IEE YEE L EE R YDF 799
570
....*....|....*.
gi 1019366892 580 L V E KIKQM E TEEAR L R 595
Cdd:COG1196 800 L S E QREDL E EARET L E 815
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
494-823
8.91e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 46.47
E-value: 8.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 494 AK EE TE L RFRQ L TM E YQAL Q RAYAL L QEQVGG -------- TLDAEREVKTR E Q L QA E VQRAQARI E D LE KA L A E QGQD mk 565
Cdd:COG1196 268 EL EE LR L ELEE L EL E LEEA Q AEEYE L LAELAR leqdiarl EERRRELEERL E E L EE E LAELEEEL E E LE EE L E E LEEE -- 345
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 566 w I EE KQALYRRNQELVEKIKQMET E EARLRH E VQDARDQNELLEFRI L ELEERERK spaisfhhtpfvdgksplqvyce A 645
Cdd:COG1196 346 - L EE AEEELEEAEAELAEAEEALL E AEAELA E AEEELEELAEELLEA L RAAAELAA ----------------------- Q 401
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 646 EGVTDIVVAE L MKK L DI L GDNAVSNLTNEEQVV -- VIQARTV L TL A EKWLQQI EE T E A AL QRKMVD L ES E KE L fskqkgy 723
Cdd:COG1196 402 LEELEEAEEA L LER L ER L EEELEELEEALAELE ee EEEEEEA L EE A AEEEAEL EE E E E AL LELLAE L LE E AA L ------- 474
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 724 L DEE L DYRKQA L DQ A NKHI L E L EAMLY D ALQQEA G A K V A E LL SEEEREKLK VAV EQWK rqvms E LRERD A QILRERME L L 803
Cdd:COG1196 475 L EAA L AELLEE L AE A AARL L L L LEAEA D YEGFLE G V K A A L LL AGLRGLAGA VAV LIGV ----- E AAYEA A LEAALAAA L Q 549
330 340
....*....|....*....|
gi 1019366892 804 QLAQQRIKELEER IE AQ K RQ 823
Cdd:COG1196 550 NIVVEDDEVAAAA IE YL K AA 569
YhaN
COG4717 Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
488-824
9.76e-04
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain]
Cd Length: 641
Bit Score: 42.83
E-value: 9.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 488 D L E E GMA K E E TE L RFRQ L TM E YQ AL QRAY A L L Q E QVG gtl DA E REVKTREQ L QA E VQRAQ A RIED L EKA L A E QGQDMKWI 567
Cdd:COG4717 113 E L R E ELE K L E KL L QLLP L YQ E LE AL EAEL A E L P E RLE --- EL E ERLEELRE L EE E LEELE A ELAE L QEE L E E LLEQLSLA 189
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 568 E E KQA -- L YRRNQ EL VEKIKQM E T E EARLRH E VQDARDQN E L LE FRILELEER ER KSP A ISF hh TPFVDGKSP L QVYCEA 645
Cdd:COG4717 190 T E EEL qd L AEELE EL QQRLAEL E E E LEEAQE E LEELEEEL E Q LE NELEAAALE ER LKE A RLL -- LLIAAALLA L LGLGGS 267
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 646 EGVTDIVV A ELMKKLDI L GDNAVSN L TN E EQVVVIQ A RTVLT L AEKWLQQI EE T E AA L QRKMVDLESEK E LFSKQKGYLD 725
Cdd:COG4717 268 LLSLILTI A GVLFLVLG L LALLFLL L AR E KASLGKE A EELQA L PALEELEE EE L E EL L AALGLPPDLSP E ELLELLDRIE 347
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 726 E ELDYRKQ A LDQANKHI LE LEAMLYD AL QQ EAG AKVA E L L SE ----- EE REK LK VAV E QWKR Q VMSE L R E R ---- D A QIL 796
Cdd:COG4717 348 E LQELLRE A EELEEELQ LE ELEQEIA AL LA EAG VEDE E E L RA aleqa EE YQE LK EEL E ELEE Q LEEL L G E L eell E A LDE 427
330 340
....*....|....*....|....*...
gi 1019366892 797 R E RM E L L QLAQQRIK ELEE RI E AQKRQI 824
Cdd:COG4717 428 E E LE E E L EELEEELE ELEE EL E ELREEL 455
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
26-256
1.36e-03
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 42.06
E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 26 EDLR A K L TDI Q I E LQQEKSKVSKVER E KNQE L R Q VREH E Q hkt AVLLTELKTKLH E EKMKE L Q A V retl L RQH E A E LLRV 105
Cdd:COG4942 23 AEAE A E L EQL Q Q E IAELEKELAALKK E EKAL L K Q LAAL E R --- RIAALARRIRAL E QELAA L E A E ---- L AEL E K E IAEL 95
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 106 IKIKDNENQR L QA LL S AL - R D G GPEKVKTV L LS E AKEE A kkgfevek V KMQ Q EISE L KG A K R QVE E A L TLVIQADKIKA A 184
Cdd:COG4942 96 RAELEAQKEE L AE LL R AL y R L G RQPPLALL L SP E DFLD A -------- V RRL Q YLKY L AP A R R EQA E E L RADLAELAALR A 167
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1019366892 185 E IRS vyhl HQE E ITRIKK E C E R E IRR L MEEIKFKDRAVFV LE R EL GVQ A GHAQR LQ LQK E A L DEQLSQVREA 256
Cdd:COG4942 168 E LEA ---- ERA E LEALLA E L E E E RAA L EALKAERQKLLAR LE K EL AEL A AELAE LQ QEA E E L EALIARLEAE 235
PTZ00121
PTZ00121 MAEBL; Provisional
50-621
1.37e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.44
E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 50 E RE K NQEL R QVREHEQHKTAVLLT E LKTKLHEE K MKELQAVR E T ll RQHEA E LLRVIKIKD NE NQ R lqalls ALRDGGPE 129
Cdd:PTZ00121 1192 E LR K AEDA R KAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE E A -- KKDAE E AKKAEEERN NE EI R ------ KFEEARMA 1263
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 130 KVKTVLLSEAK EEA K K GF E VE K VKMQQEIS E L K G A -- K RQVE EA ltlviqad K I KA A E IRSV yhlhq E E ITRIKK E CERE 207
Cdd:PTZ00121 1264 HFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee K KKAD EA -------- K K KA E E AKKA ----- D E AKKKAE E AKKK 1330
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 208 IRRLMEEIKFKDR A VFVLER E LGVQ A GH A QRLQLQK EA LDEQLSQVREADRHPGSPRR E LPH A AG A GDASDHSGSPEQQ L 287
Cdd:PTZ00121 1331 ADAAKKKAEEAKK A AEAAKA E AEAA A DE A EAAEEKA EA AEKKKEEAKKKADAAKKKAE E KKK A DE A KKKAEEDKKKADE L 1410
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 288 DEKD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRVRE AE SQY K PLLD K N K RLSR K NE D LSHALRRMEN K LKFVTQ 367
Cdd:PTZ00121 1411 KKAA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K AEEA K KA D EAKKKAEEAK K ADEAKK 1490
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 368 ENI E MRQR A GIIRRPSS ---- LNDLDQSQDEREV D fl KLQIV E QQNLI DE LS K TL E tagy V K SVL E RD K LLRFR K QRK K M 443
Cdd:PTZ00121 1491 KAE E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K AE E ---- K K KAD E LK K AEELK K AEE K K 1564
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 444 A klpkpvv V E TFFGYD E EASLESDGSSVSYQTDRTDQTPCTPDDDL E EG M AK EE TE l RFRQLTMEYQA L QR A YALLQEQV 523
Cdd:PTZ00121 1565 K ------- A E EAKKAE E DKNMALRKAEEAKKAEEARIEEVMKLYEE E KK M KA EE AK - KAEEAKIKAEE L KK A EEEKKKVE 1636
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 524 GGTLDAER E V K TR E Q L QAEVQRAQARIEDLE K ALA E --- QGQDM K WI EE K ----- Q AL YRRNQ E L -- V E KI K QM E T EE AR 593
Cdd:PTZ00121 1637 QLKKKEAE E K K KA E E L KKAEEENKIKAAEEA K KAE E dkk KAEEA K KA EE D ekkaa E AL KKEAE E A kk A E EL K KK E A EE KK 1716
570 580
....*....|....*....|....*...
gi 1019366892 594 LRH E VQD A RDQ N ELLEFRILELE E RER K 621
Cdd:PTZ00121 1717 KAE E LKK A EEE N KIKAEEAKKEA E EDK K 1744
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
528-823
1.59e-03
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 42.23
E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 528 D AER E VKTR - E Q L QAEVQR A ------ QARIED LE KA L A eq GQDMKWI E EKQALYRRN - Q EL VEKIKQM E T E E A R L RH E VQ 599
Cdd:COG1196 193 D ILG E LERQ l E P L ERQAEK A eryrel KEELKE LE AE L L -- LLKLREL E AELEELEAE l E EL EAELEEL E A E L A E L EA E LE 270
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 600 DA R DQN E L LE FRIL E LEER E R kspaisfhhtpfvdgksplqvyceaegvtdivvaelmkkldilgd NAVSN L TNE EQ VVV 679
Cdd:COG1196 271 EL R LEL E E LE LELE E AQAE E Y --------------------------------------------- ELLAE L ARL EQ DIA 305
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 680 IQARTVLT L A E K w L QQI EE TE A A L QRKMVD LE S E K E LFSKQKGYLD EEL DYRKQA L DQ A NKHI LE L EA M L YD A LQQEAGA 759
Cdd:COG1196 306 RLEERRRE L E E R - L EEL EE EL A E L EEELEE LE E E L E ELEEELEEAE EEL EEAEAE L AE A EEAL LE A EA E L AE A EEELEEL 384
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1019366892 760 KVAE L LSEEEREK L KVAV E QWKRQVMSE L RERDAQILRERMELLQ LA QQRIK E L EE RIEAQKRQ 823
Cdd:COG1196 385 AEEL L EALRAAAE L AAQL E ELEEAEEAL L ERLERLEEELEELEEA LA ELEEE E E EE EEALEEAA 448
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
496-620
2.74e-03
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 41.44
E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 496 E E T E LRFRQLTMEYQ AL QRAYAL LQE Q vggt LD A EREVKTREQLQAE V QR A QAR I ED LE KA L AEQGQDMKWI ---- E EKQ 571
Cdd:COG4913 620 A E L E EELAEAEERLE AL EAELDA LQE R ---- RE A LQRLAEYSWDEID V AS A ERE I AE LE AE L ERLDASSDDL aale E QLE 695
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1019366892 572 A L YRRNQ EL V E KIKQMET E EA RL RH E VQD A RDQNEL L EF R ILEL E ERE R 620
Cdd:COG4913 696 E L EAELE EL E E ELDELKG E IG RL EK E LEQ A EEELDE L QD R LEAA E DLA R 744
COG2433
COG2433 Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
528-617
3.77e-03
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain]
Cd Length: 644
Bit Score: 41.00
E-value: 3.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 528 DA E REVKTR E -- Q L QAE V Q R AQ A RI E D LE KA L A E QGQDMKWI E EKQALY R RNQELV ---- EK I KQMET E EA RL RH E VQDA 601
Cdd:COG2433 405 ER E LTEEEE E ir R L EEQ V E R LE A EV E E LE AE L E E KDERIERL E RELSEA R SEERRE irkd RE I SRLDR E IE RL ER E LEEE 484
90
....*....|....*.
gi 1019366892 602 R DQN E L L EFRILE L E E 617
Cdd:COG2433 485 R ERI E E L KRKLER L K E 500
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
495-821
4.63e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 40.81
E-value: 4.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 495 K E ET EL RFRQ L TMEYQA L QRAYAL LQE QV ggtlda EREVKTR E Q L Q AE V Q RAQARI E D L EKALA E QG qdmkwi EE KQA L Y 574
Cdd:TIGR02168 220 A E LR EL ELAL L VLRLEE L REELEE LQE EL ------ KEAEEEL E E L T AE L Q ELEEKL E E L RLEVS E LE ------ EE IEE L Q 287
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 575 RRNQE L VEK I KQM E TEEAR LR HEVQDARD Q N E L LE FRIL ELE ERERKSPAIS fhh TPFVDGKSP L QVYC E AE gvtdivv A 654
Cdd:TIGR02168 288 KELYA L ANE I SRL E QQKQI LR ERLANLER Q L E E LE AQLE ELE SKLDELAEEL --- AELEEKLEE L KEEL E SL ------- E 357
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 655 ELMKK L DILGDNAV S N L TNE E QVVVIQART V LT L aekw LQ QI EETEAALQ R kmvd LE SEK E LFSKQKGY L DE E LDYRKQA 734
Cdd:TIGR02168 358 AELEE L EAELEELE S R L EEL E EQLETLRSK V AQ L ---- EL QI ASLNNEIE R ---- LE ARL E RLEDRRER L QQ E IEELLKK 429
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 735 L DQ A NKHI L EL E AMLYDALQQ E AGAKVAE L LSEE E REKLKVAVEQWKRQ vmse LR ER DAQI L RE R MEL L QLA Q QRIKELE 814
Cdd:TIGR02168 430 L EE A ELKE L QA E LEELEEELE E LQEELER L EEAL E ELREELEEAEQALD ---- AA ER ELAQ L QA R LDS L ERL Q ENLEGFS 505
....*..
gi 1019366892 815 E RIE A QK 821
Cdd:TIGR02168 506 E GVK A LL 512
PTZ00121
PTZ00121 MAEBL; Provisional
38-603
5.66e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 40.51
E-value: 5.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 38 E LQQEKSKVS K V E R E K N Q E LRQVR E ----- H EQHKT A VLLT E LKT K LH E E K MK E LQAVRETLLRQH E AELLRVI K I K DN E 112
Cdd:PTZ00121 1234 E AKKDAEEAK K A E E E R N N E EIRKF E earma H FARRQ A AIKA E EAR K AD E L K KA E EKKKADEAKKAE E KKKADEA K K K AE E 1313
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 113 NQRLQALLSALRDG gpe K V K TVLLSEAK EEAKK GF E VE K VKMQQEIS E LKG A KRQ v E EA LTLVIQAD K I KA AEIRSVYH l 192
Cdd:PTZ00121 1314 AKKADEAKKKAEEA --- K K K ADAAKKKA EEAKK AA E AA K AEAEAAAD E AEA A EEK - A EA AEKKKEEA K K KA DAAKKKAE - 1388
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 193 HQEEITRI KK EC E r E IRRLME E I K FKDR A VFVLER ----- E LGVQ A GH A QRLQLQKEAL DE QLSQVR EA DRHPGSPRR el 267
Cdd:PTZ00121 1389 EKKKADEA KK KA E - E DKKKAD E L K KAAA A KKKADE akkka E EKKK A DE A KKKAEEAKKA DE AKKKAE EA KKAEEAKKK -- 1465
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 268 PHA A GAG D ASDHSGSPEQQL DE -- K D A RRFQL K IA E LSAIIRKLEDRNALLSE E RNELLKRVRE AE SQY K PLLD K NKRLS 345
Cdd:PTZ00121 1466 AEE A KKA D EAKKKAEEAKKA DE ak K K A EEAKK K AD E AKKAAEAKKKADEAKKA E EAKKADEAKK AE EAK K ADEA K KAEEK 1545
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 346 R K NED L SH A -- L RRM E N K L K f VTQENIEMRQRAGII R RPS sln DLDQSQDE R EVDFL KL QIV E QQNLID E LS K TL E tagy 423
Cdd:PTZ00121 1546 K K ADE L KK A ee L KKA E E K K K - AEEAKKAEEDKNMAL R KAE --- EAKKAEEA R IEEVM KL YEE E KKMKAE E AK K AE E ---- 1617
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 424 vksvl ERD K LLRFR K -- QR KK MAKLP K PVVV E TFFGYD E EASL E SDGSSVSYQTDRTDQTPCTPDDDLEE gm A K E ETELR 501
Cdd:PTZ00121 1618 ----- AKI K AEELK K ae EE KK KVEQL K KKEA E EKKKAE E LKKA E EENKIKAAEEAKKAEEDKKKAEEAKK -- A E E DEKKA 1690
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1019366892 502 FRQ L TM E YQALQR A YA L LQEQ vggtlda ER E V K TR E Q L QAEVQRAQARI E DLE K ala E QGQ D M K WI EE kqal YRRNQ E LV 581
Cdd:PTZ00121 1691 AEA L KK E AEEAKK A EE L KKKE ------- AE E K K KA E E L KKAEEENKIKA E EAK K --- E AEE D K K KA EE ---- AKKDE E EK 1756
570 580
....*....|....*....|..
gi 1019366892 582 E KI KQMET EE ARLRH E VQDARD 603
Cdd:PTZ00121 1757 K KI AHLKK EE EKKAE E IRKEKE 1778
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
