|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465143 Cd Length: 412 Bit Score: 766.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 1057867268 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 super family |
cl34960 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-739 |
1.97e-85 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
The actual alignment was detected with superfamily member COG5259:
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 288.32 E-value: 1.97e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 539 SGLVPLQPKTPQGRQVD-ADTKAGRKGKE------LDDLVpETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNFGLRTD 611
Cdd:COG5259 167 RGLSPFLPWGPINQRVLgAKEIEYETHKEenyspsLKSPK-KESQGKVDELKDHSEKHPSSCSCCGNKSFNTRYHNLRAE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 612 MYT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI 675
Cdd:COG5259 246 KYNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPI 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1057867268 676 EDPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 739
Cdd:COG5259 326 EDNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
715-781 |
4.15e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 125.16 E-value: 4.15e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1057867268 715 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 781
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
911-977 |
6.92e-32 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
:
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 119.55 E-value: 6.92e-32
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1057867268 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 977
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 super family |
cl31754 |
MAEBL; Provisional |
721-978 |
6.78e-08 |
|
MAEBL; Provisional
The actual alignment was detected with superfamily member PTZ00121:
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.46 E-value: 6.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 721 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 795
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 796 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 873
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 874 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 953
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 1057867268 954 QRQQLLADRQAFHMEQLKYAEMRAR 978
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
999-1234 |
1.85e-04 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 999 GSQPIPPTGAAGPPAVHGLAVAPASvvPAPAGSGAPPGslgpseqiGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG 1078
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPH--------PPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQ 2675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1079 PSPFPNQQTPPSMMP--GAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSL-ADSISINLPAPPNlhghhhhLP 1155
Cdd:PHA03247 2676 ASSPPQRPRRRAARPtvGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASpALPAAPAPPAVPA-------GP 2748
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1156 FAPGTLPPPNLPVSMANPLHPNLPA--------TTTMPSSLPLGPGLGSA-----AAQSPAIVAAVQGNLLPSASP---L 1219
Cdd:PHA03247 2749 ATPGGPARPARPPTTAGPPAPAPPAapaagpprRLTRPAVASLSESRESLpspwdPADPPAAVLAPAAALPPAASPagpL 2828
|
250
....*....|....*
gi 1057867268 1220 PDPGTPLPPDPTAPS 1234
Cdd:PHA03247 2829 PPPTSAQPTAPPPPP 2843
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465143 Cd Length: 412 Bit Score: 766.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 1057867268 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 |
COG5259 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-739 |
1.97e-85 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 288.32 E-value: 1.97e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 539 SGLVPLQPKTPQGRQVD-ADTKAGRKGKE------LDDLVpETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNFGLRTD 611
Cdd:COG5259 167 RGLSPFLPWGPINQRVLgAKEIEYETHKEenyspsLKSPK-KESQGKVDELKDHSEKHPSSCSCCGNKSFNTRYHNLRAE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 612 MYT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI 675
Cdd:COG5259 246 KYNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPI 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1057867268 676 EDPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 739
Cdd:COG5259 326 EDNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM |
pfam04433 |
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid ... |
433-512 |
8.00e-37 |
|
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Pssm-ID: 461307 [Multi-domain] Cd Length: 78 Bit Score: 133.07 E-value: 8.00e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 433 FDYNSVHAIERRALPEFFNGKnkSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Cdd:pfam04433 1 SDPDKLHPIEKRLLPEFFNGK--SKTPEVYLEIRNFILNLWRENPKEYLTKTDARRALKGDVNLISRIHEFLERWGLINF 78
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
715-781 |
4.15e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 125.16 E-value: 4.15e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1057867268 715 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 781
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
911-977 |
6.92e-32 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 119.55 E-value: 6.92e-32
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1057867268 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 977
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
721-978 |
6.78e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.46 E-value: 6.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 721 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 795
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 796 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 873
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 874 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 953
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 1057867268 954 QRQQLLADRQAFHMEQLKYAEMRAR 978
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
748-978 |
1.23e-07 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 55.64 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 748 RKVEEAAKVTGKADPAFGLESSGIAgttsDEPERIEESGNDEARVEGQATDEKKEPKEprEGGGAIEEEAKE-KTSEAPK 826
Cdd:pfam02029 77 KRLQEALERQKEFDPTIADEKESVA----ERKENNEEEENSSWEKEEKRDSRLGRYKE--EETEIREKEYQEnKWSTEVR 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 827 KDEEKG-KEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAK 905
Cdd:pfam02029 151 QAEEEGeEEEDKSEEAEEVPTENFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHPEVKSQNGEEEVTKLKVTTKRRQGGL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 906 HLAAVEERKIKSLVallvETQMKKLEIKLRH---------------------FEELETIMDREREALEYQRQQllaDRQA 964
Cdd:pfam02029 231 SQSQEREEEAEVFL----EAEQKLEELRRRRqekeseefeklrqkqqeaeleLEELKKKREERRKLLEEEEQR---RKQE 303
|
250
....*....|....
gi 1057867268 965 FHMEQLKYAEMRAR 978
Cdd:pfam02029 304 EAERKLREEEEKRR 317
|
|
| CHROMO |
smart00298 |
Chromatin organization modifier domain; |
187-222 |
1.54e-05 |
|
Chromatin organization modifier domain;
Pssm-ID: 214605 [Multi-domain] Cd Length: 55 Bit Score: 43.36 E-value: 1.54e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1057867268 187 EEEWVRPVMKR-----DKQVLLHWGYYPDSYDTWIPASEIE 222
Cdd:smart00298 1 EYEVEKILDHRwkkkgELEYLVKWKGYSYSEDTWEPEENLL 41
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
999-1234 |
1.85e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 999 GSQPIPPTGAAGPPAVHGLAVAPASvvPAPAGSGAPPGslgpseqiGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG 1078
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPH--------PPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQ 2675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1079 PSPFPNQQTPPSMMP--GAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSL-ADSISINLPAPPNlhghhhhLP 1155
Cdd:PHA03247 2676 ASSPPQRPRRRAARPtvGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASpALPAAPAPPAVPA-------GP 2748
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1156 FAPGTLPPPNLPVSMANPLHPNLPA--------TTTMPSSLPLGPGLGSA-----AAQSPAIVAAVQGNLLPSASP---L 1219
Cdd:PHA03247 2749 ATPGGPARPARPPTTAGPPAPAPPAapaagpprRLTRPAVASLSESRESLpspwdPADPPAAVLAPAAALPPAASPagpL 2828
|
250
....*....|....*
gi 1057867268 1220 PDPGTPLPPDPTAPS 1234
Cdd:PHA03247 2829 PPPTSAQPTAPPPPP 2843
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
727-883 |
6.55e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 6.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 727 ALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGK--------ADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATD 798
Cdd:TIGR00927 626 ALGDLSKGDVAEAEHTGERTGEEGERPTEAEGEngeesggeAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 799 EKKEPKEPR---EGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKEseksdGDPIVDPEKEKEPKEGQEEVLKEVVESEGE 875
Cdd:TIGR00927 706 HKGETEAEEvehEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAE-----GKHEVETEGDRKETEHEGETEAEGKEDEDE 780
|
....*...
gi 1057867268 876 RKTKVERD 883
Cdd:TIGR00927 781 GEIQAGED 788
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1005-1234 |
3.20e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.48 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1005 PTGAAGPPAVHglAVAPASVVPAPagsgapPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1084
Cdd:pfam17823 131 PAAIAALPSEA--FSAPRAAACRA------NASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1085 QQT--PPSMMPGAVPGSGHPG---VAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSI--------SINLPAP----PNL 1147
Cdd:pfam17823 203 PATltPARGISTAATATGHPAagtALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAgtvasaagTINMGDPharrLSP 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1148 HGHHHHLPFAPGTLPP-------PNLPVSMANPLHPNLPATTTMPSSLPLGPGL-GSAAAQSPAIVAAVQGNLL-PSASP 1218
Cdd:pfam17823 283 AKHMPSDTMARNPAAPmgaqaqgPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTpKSVASTNLAVVTTTKAQAKePSASP 362
|
250
....*....|....*.
gi 1057867268 1219 LPDPGTPLPPDPTAPS 1234
Cdd:pfam17823 363 VPVLHTSMIPEVEATS 378
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SWIRM-assoc_2 |
pfam16496 |
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex ... |
4-420 |
0e+00 |
|
SWIRM-associated domain at the N-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465143 Cd Length: 412 Bit Score: 766.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 4 RKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQEEVFGKHVSNAPLTKLPIKCFLD 83
Cdd:pfam16496 1 RKKDGGPNVKFFESPETLAQLESVRQWLGKNYKKYVQADPPTNKSLATLVVQLLQFQEDAFGKNVSKPPLTRLPMKCFLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 84 FKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRH 163
Cdd:pfam16496 81 FKPGGGLCHILATAYKFKSEQGWRRFDFQNPSRMDRNVEMFMNIEKALVQNNCLTRPVIYIRPDVDKKLASKLKDIIKRH 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 164 QGTVTEDKNNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWIL 243
Cdd:pfam16496 161 QGTITEDEEDATHIVYPPPPDPEEEEWARPVMKRDKQVLVHWYYFPDSYDTWVPSSDVDLPVDDPPTPEKPWRVHAKWLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 244 DTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKtltDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKKNAKKGPstP 323
Cdd:pfam16496 241 DLDQYNEWMNEEDYEVDENGKKKSHRQRISVE---DEMSSPDPDRKDKKSSPGKKRKRSPSPPPTPVGKKKSGRKGS--P 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 324 YTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNK 403
Cdd:pfam16496 316 ARRKKRRREEEEEEDLTKDMEDPTPVPNIEEVNLPKNVNSKKDSENQPVKGGTMTDLDEQEDDKVESGGKEDEEGGKTSK 395
|
410
....*....|....*..
gi 1057867268 404 GEQTKNPDLHEDNVTEQ 420
Cdd:pfam16496 396 GEGSRLSDEHEDNVTEQ 412
|
|
| RSC8 |
COG5259 |
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / ... |
379-739 |
1.97e-85 |
|
RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription];
Pssm-ID: 227584 [Multi-domain] Cd Length: 531 Bit Score: 288.32 E-value: 1.97e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 379 DLDEQEDESMETTGkdeDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKT 458
Cdd:COG5259 10 DSGEERNEQSAEIM---DHSKSANEKKTTILRVEAETFLMEQTHPIIIPSYAEWFDGSKIHEIEKRSNPEFFNGRSPSKT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 459 PEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTP 538
Cdd:COG5259 87 PEVYKDYRNFMINSYRLNPNEYLTVTACRRNVAGDVAAIVRVHRFLEKWGLINYQVDPGTRPSTIGPPLTSHFQDLHDTP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 539 SGLVPLQPKTPQGRQVD-ADTKAGRKGKE------LDDLVpETAKGKPELQTSASQQMLNFPDKGKEKPTDMQNFGLRTD 611
Cdd:COG5259 167 RGLSPFLPWGPINQRVLgAKEIEYETHKEenyspsLKSPK-KESQGKVDELKDHSEKHPSSCSCCGNKSFNTRYHNLRAE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 612 MYT------KKNV-PSKS------KAAASATRE---WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI 675
Cdd:COG5259 246 KYNscsecyDQGRfPSEFtssdfkPVTISLLIRdknWSRQELLLLLEGIEMYGDDWDKVARHVGTKTKEQCILHFLQLPI 325
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1057867268 676 EDPYLEDSEASlGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAS----AAAKSALEEFSKMKEEVP 739
Cdd:COG5259 326 EDNYLSKGDGK-GDNSKGRLPFDGSENPVLSTISFLAGIVNPRVQSekqrAIIKSGKISHINRESQEH 392
|
|
| SWIRM |
pfam04433 |
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid ... |
433-512 |
8.00e-37 |
|
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Pssm-ID: 461307 [Multi-domain] Cd Length: 78 Bit Score: 133.07 E-value: 8.00e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 433 FDYNSVHAIERRALPEFFNGKnkSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Cdd:pfam04433 1 SDPDKLHPIEKRLLPEFFNGK--SKTPEVYLEIRNFILNLWRENPKEYLTKTDARRALKGDVNLISRIHEFLERWGLINF 78
|
|
| SWIRM-assoc_3 |
pfam16498 |
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex ... |
715-781 |
4.15e-34 |
|
SWIRM-associated domain at the C-terminal; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465145 [Multi-domain] Cd Length: 67 Bit Score: 125.16 E-value: 4.15e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1057867268 715 VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPER 781
Cdd:pfam16498 1 VDPRVAAAAAKAAMEEFSKIKEEVPPALVEAHVKNVEEAAKKGGKVDPAFGLEKSGIAGTDPEEPEK 67
|
|
| SWIRM-assoc_1 |
pfam16495 |
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 ... |
911-977 |
6.92e-32 |
|
SWIRM-associated region 1; Much of the higher eukaryote SWI/SNF complex subunit SMARCC2 proteins is of low-complexity and or disordered. However, there are several short regions that are quite highly conserved. This is one of these regions. The function of the individual regions is not known.
Pssm-ID: 465142 [Multi-domain] Cd Length: 84 Bit Score: 119.55 E-value: 6.92e-32
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1057867268 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRA 977
Cdd:pfam16495 18 EEREIQRLVALLVETQLKKLELKLKQFEELEKLLERERRQLERQRQQLFLERLAFKKQRLEVAEKLA 84
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
721-978 |
6.78e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.46 E-value: 6.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 721 SAAAKSALEEFSKMKEEVPTAlVEA-----HVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQ 795
Cdd:PTZ00121 1413 AAAAKKKADEAKKKAEEKKKA-DEAkkkaeEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 796 ATDEKKEPKEPREgggaiEEEAKEKTSEApKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQ--EEVLKEVVESE 873
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEA-KKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKkaEELKKAEEKKK 1565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 874 GERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEiKLRHFEELETIMDREREALEY 953
Cdd:PTZ00121 1566 AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE-ELKKAEEEKKKVEQLKKKEAE 1644
|
250 260
....*....|....*....|....*
gi 1057867268 954 QRQQLLADRQAFHMEQLKYAEMRAR 978
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIKAAEEAKK 1669
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
748-978 |
1.23e-07 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 55.64 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 748 RKVEEAAKVTGKADPAFGLESSGIAgttsDEPERIEESGNDEARVEGQATDEKKEPKEprEGGGAIEEEAKE-KTSEAPK 826
Cdd:pfam02029 77 KRLQEALERQKEFDPTIADEKESVA----ERKENNEEEENSSWEKEEKRDSRLGRYKE--EETEIREKEYQEnKWSTEVR 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 827 KDEEKG-KEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAK 905
Cdd:pfam02029 151 QAEEEGeEEEDKSEEAEEVPTENFAKEEVKDEKIKKEKKVKYESKVFLDQKRGHPEVKSQNGEEEVTKLKVTTKRRQGGL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 906 HLAAVEERKIKSLVallvETQMKKLEIKLRH---------------------FEELETIMDREREALEYQRQQllaDRQA 964
Cdd:pfam02029 231 SQSQEREEEAEVFL----EAEQKLEELRRRRqekeseefeklrqkqqeaeleLEELKKKREERRKLLEEEEQR---RKQE 303
|
250
....*....|....
gi 1057867268 965 FHMEQLKYAEMRAR 978
Cdd:pfam02029 304 EAERKLREEEEKRR 317
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
719-978 |
1.14e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.14 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 719 VASAAAKSALEEFSKMKEEVPTALveahvRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEEsgndeARVEGQATD 798
Cdd:PTZ00121 1557 LKKAEEKKKAEEAKKAEEDKNMAL-----RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE-----AKIKAEELK 1626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 799 EKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEvvesEGERKT 878
Cdd:PTZ00121 1627 KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK----EAEEAK 1702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 879 KVERdigegnlstAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQL 958
Cdd:PTZ00121 1703 KAEE---------LKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEI 1773
|
250 260
....*....|....*....|
gi 1057867268 959 LADRQAFHMEQLKYAEMRAR 978
Cdd:PTZ00121 1774 RKEKEAVIEEELDEEDEKRR 1793
|
|
| CHROMO |
smart00298 |
Chromatin organization modifier domain; |
187-222 |
1.54e-05 |
|
Chromatin organization modifier domain;
Pssm-ID: 214605 [Multi-domain] Cd Length: 55 Bit Score: 43.36 E-value: 1.54e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1057867268 187 EEEWVRPVMKR-----DKQVLLHWGYYPDSYDTWIPASEIE 222
Cdd:smart00298 1 EYEVEKILDHRwkkkgELEYLVKWKGYSYSEDTWEPEENLL 41
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
716-881 |
3.20e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.60 E-value: 3.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 716 DPRVASAAAKSalEEFSKMKEEVPTAlveAHVRKVEEAAKVTGKADPAFGLESSGIAGT---TSDEPERIEESGN-DEAR 791
Cdd:PTZ00121 1222 DAKKAEAVKKA--EEAKKDAEEAKKA---EEERNNEEIRKFEEARMAHFARRQAAIKAEearKADELKKAEEKKKaDEAK 1296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 792 V--EGQATDE-KKEPKEPREGGGAIE--EEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVL 866
Cdd:PTZ00121 1297 KaeEKKKADEaKKKAEEAKKADEAKKkaEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA 1376
|
170
....*....|....*...
gi 1057867268 867 K---EVVESEGERKTKVE 881
Cdd:PTZ00121 1377 KkkaDAAKKKAEEKKKAD 1394
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
725-884 |
5.21e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 5.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 725 KSALEEFSKMKEEVPTALVEAHVRKVEEAAKV---TGKADPAFGLESSgiAGTTSDEPERIEESGNDEARVEGQATDEKK 801
Cdd:PTZ00121 1639 KKKEAEEKKKAEELKKAEEENKIKAAEEAKKAeedKKKAEEAKKAEED--EKKAAEALKKEAEEAKKAEELKKKEAEEKK 1716
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 802 EPKEPREGggaiEEEAKEKTSEAPKKDEEKGKEGDS----EKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGE-R 876
Cdd:PTZ00121 1717 KAEELKKA----EEENKIKAEEAKKEAEEDKKKAEEakkdEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEkR 1792
|
....*...
gi 1057867268 877 KTKVERDI 884
Cdd:PTZ00121 1793 RMEVDKKI 1800
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
722-974 |
1.35e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 722 AAAKSALEEFSKMKEEVPTAlvEAHVRKVEEAAKvtgKADPAfglessgiaGTTSDEPERIEESGNDEARvegQATDEKK 801
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKA--DEAKKKAEEAKK---KADAA---------KKKAEEAKKAAEAAKAEAE---AAADEAE 1360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 802 EPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESE--KSDGDPIVDPEKEK----EPKEGQEEVLK-EVVESEG 874
Cdd:PTZ00121 1361 AAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEedKKKADELKKAAAAKkkadEAKKKAEEKKKaDEAKKKA 1440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 875 ERKTKVERdigegnlstaaAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQ 954
Cdd:PTZ00121 1441 EEAKKADE-----------AKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAK 1509
|
250 260
....*....|....*....|..
gi 1057867268 955 RQ--QLLADRQAFHMEQLKYAE 974
Cdd:PTZ00121 1510 KKadEAKKAEEAKKADEAKKAE 1531
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
999-1234 |
1.85e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 999 GSQPIPPTGAAGPPAVHGLAVAPASvvPAPAGSGAPPGslgpseqiGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHG 1078
Cdd:PHA03247 2606 GDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPH--------PPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQ 2675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1079 PSPFPNQQTPPSMMP--GAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSL-ADSISINLPAPPNlhghhhhLP 1155
Cdd:PHA03247 2676 ASSPPQRPRRRAARPtvGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASpALPAAPAPPAVPA-------GP 2748
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1156 FAPGTLPPPNLPVSMANPLHPNLPA--------TTTMPSSLPLGPGLGSA-----AAQSPAIVAAVQGNLLPSASP---L 1219
Cdd:PHA03247 2749 ATPGGPARPARPPTTAGPPAPAPPAapaagpprRLTRPAVASLSESRESLpspwdPADPPAAVLAPAAALPPAASPagpL 2828
|
250
....*....|....*
gi 1057867268 1220 PDPGTPLPPDPTAPS 1234
Cdd:PHA03247 2829 PPPTSAQPTAPPPPP 2843
|
|
| Myb_DNA-binding |
pfam00249 |
Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, ... |
646-673 |
5.96e-04 |
|
Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family.
Pssm-ID: 459731 [Multi-domain] Cd Length: 46 Bit Score: 38.64 E-value: 5.96e-04
10 20
....*....|....*....|....*...
gi 1057867268 646 MYKDDWNKVSEHVGSRTQDECILHFLRL 673
Cdd:pfam00249 18 KLGNRWKKIAKLLPGRTDNQCKNRWQNY 45
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
727-883 |
6.55e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.22 E-value: 6.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 727 ALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGK--------ADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATD 798
Cdd:TIGR00927 626 ALGDLSKGDVAEAEHTGERTGEEGERPTEAEGEngeesggeAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 799 EKKEPKEPR---EGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKEseksdGDPIVDPEKEKEPKEGQEEVLKEVVESEGE 875
Cdd:TIGR00927 706 HKGETEAEEvehEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAE-----GKHEVETEGDRKETEHEGETEAEGKEDEDE 780
|
....*...
gi 1057867268 876 RKTKVERD 883
Cdd:TIGR00927 781 GEIQAGED 788
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
745-963 |
1.87e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 42.68 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 745 AHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKE---PREGGGAIEEEAKEKT 821
Cdd:TIGR00927 622 AKVMALGDLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEgeiPAERKGEQEGEGEIEA 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 822 SEAPKKDEEKGKEGDSEKESEkSDGDpivDPEKEKEPKEGQEEVLKEV---VESEGERKTKVERDIGEGNLSTAAAAALA 898
Cdd:TIGR00927 702 KEADHKGETEAEEVEHEGETE-AEGT---EDEGEIETGEEGEEVEDEGegeAEGKHEVETEGDRKETEHEGETEAEGKED 777
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1057867268 899 AAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQ 963
Cdd:TIGR00927 778 EDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQ 842
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
702-881 |
2.16e-03 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 42.27 E-value: 2.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 702 NPVMSTVAFLASVV------DPRVASAAAKSALEEFSKMKEEVPTALVEAhvrKVEEAAKVTGKADPafGLESSGIAGTT 775
Cdd:PRK13108 257 NSFTSTFVFIGAVVyiilapKGREAPGALRGSEYVVDEALEREPAELAAA---AVASAASAVGPVGP--GEPNQPDDVAE 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 776 SDEPERIEESGNDEARVEGQ----------ATDEKKEPKEPREGGGAIEEEAkektSEAPKKDEEKGKEGDSE---KESE 842
Cdd:PRK13108 332 AVKAEVAEVTDEVAAESVVQvadrdgestpAVEETSEADIEREQPGDLAGQA----PAAHQVDAEAASAAPEEpaaLASE 407
|
170 180 190
....*....|....*....|....*....|....*....
gi 1057867268 843 KSDGDPIVDPEKEkEPKEGQEEVLKEVVESEGERKTKVE 881
Cdd:PRK13108 408 AHDETEPEVPEKA-APIPDPAKPDELAVAGPGDDPAEPD 445
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1005-1234 |
3.20e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.48 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1005 PTGAAGPPAVHglAVAPASVVPAPagsgapPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPN 1084
Cdd:pfam17823 131 PAAIAALPSEA--FSAPRAAACRA------NASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1085 QQT--PPSMMPGAVPGSGHPG---VAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSI--------SINLPAP----PNL 1147
Cdd:pfam17823 203 PATltPARGISTAATATGHPAagtALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAgtvasaagTINMGDPharrLSP 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 1148 HGHHHHLPFAPGTLPP-------PNLPVSMANPLHPNLPATTTMPSSLPLGPGL-GSAAAQSPAIVAAVQGNLL-PSASP 1218
Cdd:pfam17823 283 AKHMPSDTMARNPAAPmgaqaqgPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTpKSVASTNLAVVTTTKAQAKePSASP 362
|
250
....*....|....*.
gi 1057867268 1219 LPDPGTPLPPDPTAPS 1234
Cdd:pfam17823 363 VPVLHTSMIPEVEATS 378
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
769-887 |
8.34e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 39.95 E-value: 8.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1057867268 769 SGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREG-GGAIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGD 847
Cdd:PHA03169 102 SPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPShPGPHEPAPPESHNPSPNQQPSSFLQPSHEDSPEEPEPP 181
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1057867268 848 PIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEG 887
Cdd:PHA03169 182 TSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQ 221
|
|
| |
