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Conserved domains on  [gi|1388591357|ref|NP_001350115|]
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small integral membrane protein 19 isoform 2 [Homo sapiens]

Protein Classification

small integral membrane protein 19( domain architecture ID 10633453)

small integral membrane protein 19 (SMIM19)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UPF0697 pfam15117
Uncharacterized protein family UPF0697; This family of uncharacterized proteins is found in ...
 17-114 3.72e-65

Uncharacterized protein family UPF0697; This family of uncharacterized proteins is found in vertebrates. Proteins in this family are typically around 100 amino acids in length.


:

Pssm-ID: 373575  Cd Length: 98  Bit Score: 192.08  E-value: 3.72e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591357  17 DDGSIDYTVHEAWNEATNVYLIVILVSFGLFMYAKRNKRRIMRIFSVPPTEETLSEPNFYDTISKIRLRQQLEMYSISRK 96
Cdd:pfam15117   1 DDGSIDYSVHEAWNEATNVYLLVILVSFGLLMYARKNKRKIMRIFTVPPTAETPSEPNFYDSMKKIRLRQQLEMYSIARK 80

                          90
                  ....*....|....*...
gi 1388591357  97 YDYQQPQNQADSVQLSLE 114
Cdd:pfam15117  81 YEQQQQQNQTDSVQLSVE 98
 
Name Accession Description Interval E-value
UPF0697 pfam15117
Uncharacterized protein family UPF0697; This family of uncharacterized proteins is found in ...
 17-114 3.72e-65

Uncharacterized protein family UPF0697; This family of uncharacterized proteins is found in vertebrates. Proteins in this family are typically around 100 amino acids in length.


Pssm-ID: 373575  Cd Length: 98  Bit Score: 192.08  E-value: 3.72e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591357  17 DDGSIDYTVHEAWNEATNVYLIVILVSFGLFMYAKRNKRRIMRIFSVPPTEETLSEPNFYDTISKIRLRQQLEMYSISRK 96
Cdd:pfam15117   1 DDGSIDYSVHEAWNEATNVYLLVILVSFGLLMYARKNKRKIMRIFTVPPTAETPSEPNFYDSMKKIRLRQQLEMYSIARK 80

                          90
                  ....*....|....*...
gi 1388591357  97 YDYQQPQNQADSVQLSLE 114
Cdd:pfam15117  81 YEQQQQQNQTDSVQLSVE 98
 
Name Accession Description Interval E-value
UPF0697 pfam15117
Uncharacterized protein family UPF0697; This family of uncharacterized proteins is found in ...
 17-114 3.72e-65

Uncharacterized protein family UPF0697; This family of uncharacterized proteins is found in vertebrates. Proteins in this family are typically around 100 amino acids in length.


Pssm-ID: 373575  Cd Length: 98  Bit Score: 192.08  E-value: 3.72e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1388591357  17 DDGSIDYTVHEAWNEATNVYLIVILVSFGLFMYAKRNKRRIMRIFSVPPTEETLSEPNFYDTISKIRLRQQLEMYSISRK 96
Cdd:pfam15117   1 DDGSIDYSVHEAWNEATNVYLLVILVSFGLLMYARKNKRKIMRIFTVPPTAETPSEPNFYDSMKKIRLRQQLEMYSIARK 80

                          90
                  ....*....|....*...
gi 1388591357  97 YDYQQPQNQADSVQLSLE 114
Cdd:pfam15117  81 YEQQQQQNQTDSVQLSVE 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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