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Conserved domains on  [gi|1785914670|ref|NP_001364150|]
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plakophilin-4 isoform c [Homo sapiens]

Protein Classification

Arm domain-containing protein( domain architecture ID 11997863)

Arm domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 558-597 1.78e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 54.00  E-value: 1.78e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 1785914670  558 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 597
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 864-899 4.90e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 4.90e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 1785914670   864 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 899
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 602-643 4.95e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 4.95e-07
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 1785914670   602 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 643
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 194-347 1.56e-04

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.47  E-value: 1.56e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  194 AEGQTLVQPSVANRAMRRVSSVPSRAQSPSyvistGVSPSRGSLRTSLGSGFGSPSVTDPRPLNPSAYSSTTLP------ 267
Cdd:PHA03247  2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPD-----PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPrrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  268 --AARAASPySQRPASPTAIRRIGSVTSRQTSNPNGPTPQYQTTARV-GSPLTLTDAQTRVASPSQGQVGSSSPKRSGmT 344
Cdd:PHA03247  2671 grAAQASSP-PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVsATPLPPGPAAARQASPALPAAPAPPAVPAG-P 2748


                   ...
gi 1785914670  345 AVP 347
Cdd:PHA03247  2749 ATP 2751
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 847-968 2.83e-04

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.48  E-value: 2.83e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  847 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 920
Cdd:PLN03200   169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1785914670  921 PGGNGPSVlsdetMAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 968
Cdd:PLN03200   241 GQGNEVSV-----RAEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 948-992 3.97e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 3.97e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1785914670   948 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 992
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
 
Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 558-597 1.78e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 54.00  E-value: 1.78e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 1785914670  558 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 597
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 558-598 3.32e-09

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 53.20  E-value: 3.32e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 1785914670   558 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLVF 598
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 864-899 4.90e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 4.90e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 1785914670   864 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 899
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 602-643 4.95e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 4.95e-07
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 1785914670   602 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 643
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 602-643 2.14e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 45.52  E-value: 2.14e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1785914670  602 TDENKIAMKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSS 643
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-347 1.56e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.47  E-value: 1.56e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  194 AEGQTLVQPSVANRAMRRVSSVPSRAQSPSyvistGVSPSRGSLRTSLGSGFGSPSVTDPRPLNPSAYSSTTLP------ 267
Cdd:PHA03247  2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPD-----PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPrrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  268 --AARAASPySQRPASPTAIRRIGSVTSRQTSNPNGPTPQYQTTARV-GSPLTLTDAQTRVASPSQGQVGSSSPKRSGmT 344
Cdd:PHA03247  2671 grAAQASSP-PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVsATPLPPGPAAARQASPALPAAPAPPAVPAG-P 2748


                   ...
gi 1785914670  345 AVP 347
Cdd:PHA03247  2749 ATP 2751
HEAT COG1413
HEAT repeat [General function prediction only];
525-647 1.98e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 42.69  E-value: 1.98e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  525 RDPE-LPEVIHMLQHQFPSVQANAAAYLQHLcfGDNKVkmevcrlggIKHLVDLLDHRVLEVQKNACGALRNLvfgkstd 603
Cdd:COG1413     13 GDPAaVPALIAALADEDPDVRAAAARALGRL--GDPRA---------VPALLEALKDPDPEVRAAAAEALGRI------- 74

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1785914670  604 enkiamKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSSCDAV 647
Cdd:COG1413     75 ------GDPEAVPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV 111
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 864-899 2.56e-04

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 39.36  E-value: 2.56e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1785914670  864 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 899
Cdd:pfam00514    5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 847-968 2.83e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.48  E-value: 2.83e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  847 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 920
Cdd:PLN03200   169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1785914670  921 PGGNGPSVlsdetMAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 968
Cdd:PLN03200   241 GQGNEVSV-----RAEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 948-992 3.97e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 3.97e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1785914670   948 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 992
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 529-643 6.98e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.86  E-value: 6.98e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  529 LPEVIHMLQHQFPSVQANAAAYLQHLCfGDNKVKMEVCrLGG-IKHLVDLLDHRVLEVQKNACGALRNLVFGKSTDEnkI 607
Cdd:PLN03200    60 MPLLVSLLRSGTLGAKVNAAAVLGVLC-KEEDLRVKVL-LGGcIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDH--V 135

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1785914670  608 AMK---NVGGIPALLRLL--RKSIDAEVRELVTGVLWNLSS 643
Cdd:PLN03200   136 GSKifsTEGVVPSLWDQLqpGNKQDKVVEGLLTGALRNLCG 176
 
Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 558-597 1.78e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 54.00  E-value: 1.78e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 1785914670  558 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 597
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 558-598 3.32e-09

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 53.20  E-value: 3.32e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 1785914670   558 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLVF 598
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 864-899 4.90e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 4.90e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 1785914670   864 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 899
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 602-643 4.95e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 4.95e-07
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 1785914670   602 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 643
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 602-643 2.14e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 45.52  E-value: 2.14e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1785914670  602 TDENKIAMKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSS 643
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-347 1.56e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.47  E-value: 1.56e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  194 AEGQTLVQPSVANRAMRRVSSVPSRAQSPSyvistGVSPSRGSLRTSLGSGFGSPSVTDPRPLNPSAYSSTTLP------ 267
Cdd:PHA03247  2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPD-----PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPrrarrl 2670

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  268 --AARAASPySQRPASPTAIRRIGSVTSRQTSNPNGPTPQYQTTARV-GSPLTLTDAQTRVASPSQGQVGSSSPKRSGmT 344
Cdd:PHA03247  2671 grAAQASSP-PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVsATPLPPGPAAARQASPALPAAPAPPAVPAG-P 2748


                   ...
gi 1785914670  345 AVP 347
Cdd:PHA03247  2749 ATP 2751
HEAT COG1413
HEAT repeat [General function prediction only];
525-647 1.98e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 42.69  E-value: 1.98e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  525 RDPE-LPEVIHMLQHQFPSVQANAAAYLQHLcfGDNKVkmevcrlggIKHLVDLLDHRVLEVQKNACGALRNLvfgkstd 603
Cdd:COG1413     13 GDPAaVPALIAALADEDPDVRAAAARALGRL--GDPRA---------VPALLEALKDPDPEVRAAAAEALGRI------- 74

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1785914670  604 enkiamKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSSCDAV 647
Cdd:COG1413     75 ------GDPEAVPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV 111
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 864-899 2.56e-04

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 39.36  E-value: 2.56e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1785914670  864 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 899
Cdd:pfam00514    5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 847-968 2.83e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.48  E-value: 2.83e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  847 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 920
Cdd:PLN03200   169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1785914670  921 PGGNGPSVlsdetMAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 968
Cdd:PLN03200   241 GQGNEVSV-----RAEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 948-992 3.97e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 3.97e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1785914670   948 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 992
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 529-643 6.98e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.86  E-value: 6.98e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1785914670  529 LPEVIHMLQHQFPSVQANAAAYLQHLCfGDNKVKMEVCrLGG-IKHLVDLLDHRVLEVQKNACGALRNLVFGKSTDEnkI 607
Cdd:PLN03200    60 MPLLVSLLRSGTLGAKVNAAAVLGVLC-KEEDLRVKVL-LGGcIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDH--V 135

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1785914670  608 AMK---NVGGIPALLRLL--RKSIDAEVRELVTGVLWNLSS 643
Cdd:PLN03200   136 GSKifsTEGVVPSLWDQLqpGNKQDKVVEGLLTGALRNLCG 176
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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