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Conserved domains on  [gi|1859470595|ref|NP_001371408|]
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angiotensinogen precursor [Homo sapiens]

Protein Classification

serpinA8_AGT domain-containing protein( domain architecture ID 10114481)

serpinA8_AGT domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
serpinA8_AGT cd02054
serpin family A member 8, angiotensinogen; Angiotensinogen (AGT) is part of the ...
28-474 0e+00

serpin family A member 8, angiotensinogen; Angiotensinogen (AGT) is part of the renin-angiotensin system (RAS), which plays an important role in blood pressure regulation, renal hemodynamics, as well as fluid and electrolyte homeostasis. It is also involved in normal and abnormal growth processes. The growth promoting actions of angiotensin have been shown in a variety of cells and tissues. This subgroup represents clade A8 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


:

Pssm-ID: 381010 [Multi-domain]  Cd Length: 446  Bit Score: 746.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  28 YIHPFHLVIHNESTCEQLAKANAGKPKDPTFIPAPIQAKTSPVDEKALQDQLVLVAAKLDTEDKLRAAMVGMLANFLGFR 107
Cdd:cd02054     1 YIHPFHLFAHNNSTCEQLQKQNAGKPKDPTFIPPPIQAKTSPVDEKTLDDQLVLAAEKLRDEDTQRAAVVAMLANFLGFR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 108 IYGMHSELWGVvHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLDAHKVLSALQAVQGLLVAQGR 187
Cdd:cd02054    81 MYGMLSELWGV-HTNTLLSPVAAFGTLVSLYLGALDKTASSLQALLGVPWKSEDCTSRLDGHKVLSALQAVQGLLVAQGR 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 188 ADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLPRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTL 267
Cdd:cd02054   160 ADSQAQLLLSTVVGTFTAPGLDLKQPFVQGLADFTPASFPRSLDFTEPEVAEEKINRFIQAVTGWKMKSSLKGVSPDSTL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 268 AFNTYVHFQGKMKGFSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHYASDLDKV 347
Cdd:cd02054   240 LFNTYVHFQGKMRGFSQLTSPQEFWVDNSTSVSVPMMSGTGTFQHWSDAQDNFSVTQVPLSERATLLLIQPHEASDLDKV 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 348 EGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIRVGEVLNSIFFELEADE 427
Cdd:cd02054   320 EALLFQNNILTWIKNLSPRTIELTLPQLSLSGSYDLQDLLAQMKLPALLGTEANLQKSSKENFRVGEVLNSIVFELSAGE 399
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1859470595 428 REPTESTQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANPLS 474
Cdd:cd02054   400 REVQESTEQGNKPEVLKVTLNRPFLFAVYEQNSNALHFLGRVTNPTS 446
 
Name Accession Description Interval E-value
serpinA8_AGT cd02054
serpin family A member 8, angiotensinogen; Angiotensinogen (AGT) is part of the ...
28-474 0e+00

serpin family A member 8, angiotensinogen; Angiotensinogen (AGT) is part of the renin-angiotensin system (RAS), which plays an important role in blood pressure regulation, renal hemodynamics, as well as fluid and electrolyte homeostasis. It is also involved in normal and abnormal growth processes. The growth promoting actions of angiotensin have been shown in a variety of cells and tissues. This subgroup represents clade A8 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381010 [Multi-domain]  Cd Length: 446  Bit Score: 746.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  28 YIHPFHLVIHNESTCEQLAKANAGKPKDPTFIPAPIQAKTSPVDEKALQDQLVLVAAKLDTEDKLRAAMVGMLANFLGFR 107
Cdd:cd02054     1 YIHPFHLFAHNNSTCEQLQKQNAGKPKDPTFIPPPIQAKTSPVDEKTLDDQLVLAAEKLRDEDTQRAAVVAMLANFLGFR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 108 IYGMHSELWGVvHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLDAHKVLSALQAVQGLLVAQGR 187
Cdd:cd02054    81 MYGMLSELWGV-HTNTLLSPVAAFGTLVSLYLGALDKTASSLQALLGVPWKSEDCTSRLDGHKVLSALQAVQGLLVAQGR 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 188 ADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLPRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTL 267
Cdd:cd02054   160 ADSQAQLLLSTVVGTFTAPGLDLKQPFVQGLADFTPASFPRSLDFTEPEVAEEKINRFIQAVTGWKMKSSLKGVSPDSTL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 268 AFNTYVHFQGKMKGFSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHYASDLDKV 347
Cdd:cd02054   240 LFNTYVHFQGKMRGFSQLTSPQEFWVDNSTSVSVPMMSGTGTFQHWSDAQDNFSVTQVPLSERATLLLIQPHEASDLDKV 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 348 EGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIRVGEVLNSIFFELEADE 427
Cdd:cd02054   320 EALLFQNNILTWIKNLSPRTIELTLPQLSLSGSYDLQDLLAQMKLPALLGTEANLQKSSKENFRVGEVLNSIVFELSAGE 399
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1859470595 428 REPTESTQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANPLS 474
Cdd:cd02054   400 REVQESTEQGNKPEVLKVTLNRPFLFAVYEQNSNALHFLGRVTNPTS 446
SERPIN smart00093
SERine Proteinase INhibitors;
106-472 3.74e-94

SERine Proteinase INhibitors;


Pssm-ID: 214513 [Multi-domain]  Cd Length: 359  Bit Score: 289.08  E-value: 3.74e-94
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  106 FRIYGMHSELWGvvHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDkncTSRLDAHKvlsALQAVQGLLVAq 185
Cdd:smart00093   1 FDLYKELAKESP--DKNIFFSPVSISSALAMLSLGAKGSTATQILEVLGFNLTE---TSEADIHQ---GFQHLLHLLNR- 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  186 gradSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVvLPRSLDFTE-LDVAAEKIDRFMQAVTGWKTGCSLMGASVD 264
Cdd:smart00093  72 ----PDSQLELKTANALFVDKSLKLKDSFLEDIKKLYGA-EVQSVDFSDkAEEAKKQINDWVEKKTQGKIKDLLSDLDSD 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  265 STLAFNTYVHFQGKMKGFSLLAEPQE--FWVDNSTSVSVPMLSGMGT-FQHWSDIQDNFSVTQVPFTESACLLLIQPHYa 341
Cdd:smart00093 147 TRLVLVNAIYFKGKWKTPFDPELTREedFHVDETTTVKVPMMSQTGRtFNYGHDEELNCQVLELPYKGNASMLIILPDE- 225
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  342 SDLDKVEGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIF 420
Cdd:smart00093 226 GGLEKLEKALTPETLKKWMKSLTKRSVELYLPKFKIEGTYDLKDVLEKLGITDLFSNKADLSGISEDKdLKVSKVLHKAV 305
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1859470595  421 FELEADEREPTESTQQLNKPEVL--EVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:smart00093 306 LEVNEEGTEAAAATGVIAVPRSLppEFKANRPFLFLIRDNKTGSILFMGKVVNP 359
Serpin pfam00079
Serpin (serine protease inhibitor); Structure is a multi-domain fold containing a bundle of ...
99-472 1.24e-79

Serpin (serine protease inhibitor); Structure is a multi-domain fold containing a bundle of helices and a beta sandwich.


Pssm-ID: 459662 [Multi-domain]  Cd Length: 368  Bit Score: 252.16  E-value: 1.24e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  99 MLANFLGFRIYGMHSELWGvvHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRlDAHKVLSALQAv 178
Cdd:pfam00079   1 AANNDFAFDLYKELAKENP--DKNIFFSPLSISSALAMLYLGAKGETAEQLLEALGFNELDEEDVHQ-GFQKLLQSLNK- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 179 qgllvaqgradSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLpRSLDFTELDVAAEKIDRFMQAVTGWKTGcSL 258
Cdd:pfam00079  77 -----------PDKGYELKLANALFVEKGLKLKPDFLQLAKKYYGAEV-ESVDFSDPSEARKKINSWVEKKTNGKIK-DL 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 259 MGASVDST--LAFNTYVHFQGKMK-GFSLLA-EPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLL 334
Cdd:pfam00079 144 LPEGLDSDtrLVLVNAIYFKGKWKtPFDPENtREEPFHVNEGTTVKVPMMSQEGQFRYAEDEELGFKVLELPYKGNLSML 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 335 LIQPHYASDLDKVEGLTFQQNSLNWMKKLSPRTIH-LTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSND-RIRV 412
Cdd:pfam00079 224 IILPDEIGGLEELEKSLTAETLLEWTSSLKMRKVReLSLPKFKIEYSYDLKDVLKKLGITDAFSEEADFSGISDDePLYV 303
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1859470595 413 GEVLNSIFFELEADEREPTEST-----QQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:pfam00079 304 SEVVHKAFIEVNEEGTEAAAATgvvvvLLSAPPSPPEFKADRPFLFFIRDNKTGSILFLGRVVNP 368
SERPIN COG4826
Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones];
88-472 6.32e-18

Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443854 [Multi-domain]  Cd Length: 411  Bit Score: 85.72  E-value: 6.32e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  88 TEDKLRAAMVGMLANFlGFRIYgmhSELWG-VVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPwkdknctsrL 166
Cdd:COG4826    36 VDAADLAALVAANNAF-AFDLF---KELAKeEADGNLFFSPLSISSALAMTYNGARGETAEEMAKVLGFG---------L 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 167 DAHKVLSALQAvqgLLVAQGRADSQAQLllSTVVGVFTAPGLHLKQPFVQGLALY--TPVvlpRSLDFTELDVAAEKIDR 244
Cdd:COG4826   103 DLEELNAAFAA---LLAALNNDDPKVEL--SIANSLWAREGFTFKPDFLDTLADYygAGV---TSLDFSNDEAARDTINK 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 245 fmqavtgW---KTGC---SLMGASVDS-TLAF--NTyVHFQGK-MKGFSLLA-EPQEFWVDNSTSVSVPMLSGMGTFQHW 313
Cdd:COG4826   175 -------WvseKTNGkikDLLPPAIDPdTRLVltNA-IYFKGAwATPFDKSDtEDAPFTLADGSTVQVPMMHQTGTFPYA 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 314 SDiqDNFSVTQVPFTESAC-LLLIQPHYASDLDKVE-GLTfQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAE 391
Cdd:COG4826   247 EG--DGFQAVELPYGGGELsMVVILPKEGGSLEDFEaSLT-AENLAEILSSLSSQEVDLSLPKFKFEYEFELKDALKALG 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 392 LPAILHTELNLQKLSNDR-IRVGEVLNSIFfeLEADErEPTE---STQ-----QLNKPEVLEVTLNRPFLFAVYDQSATA 462
Cdd:COG4826   324 MPDAFTDAADFSGMTDGEnLYISDVIHKAF--IEVDE-EGTEaaaATAvgmelTSAPPEPVEFIADRPFLFFIRDNETGT 400
                         410
                  ....*....|
gi 1859470595 463 LHFLGRVANP 472
Cdd:COG4826   401 ILFMGRVVDP 410
 
Name Accession Description Interval E-value
serpinA8_AGT cd02054
serpin family A member 8, angiotensinogen; Angiotensinogen (AGT) is part of the ...
28-474 0e+00

serpin family A member 8, angiotensinogen; Angiotensinogen (AGT) is part of the renin-angiotensin system (RAS), which plays an important role in blood pressure regulation, renal hemodynamics, as well as fluid and electrolyte homeostasis. It is also involved in normal and abnormal growth processes. The growth promoting actions of angiotensin have been shown in a variety of cells and tissues. This subgroup represents clade A8 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381010 [Multi-domain]  Cd Length: 446  Bit Score: 746.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  28 YIHPFHLVIHNESTCEQLAKANAGKPKDPTFIPAPIQAKTSPVDEKALQDQLVLVAAKLDTEDKLRAAMVGMLANFLGFR 107
Cdd:cd02054     1 YIHPFHLFAHNNSTCEQLQKQNAGKPKDPTFIPPPIQAKTSPVDEKTLDDQLVLAAEKLRDEDTQRAAVVAMLANFLGFR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 108 IYGMHSELWGVvHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLDAHKVLSALQAVQGLLVAQGR 187
Cdd:cd02054    81 MYGMLSELWGV-HTNTLLSPVAAFGTLVSLYLGALDKTASSLQALLGVPWKSEDCTSRLDGHKVLSALQAVQGLLVAQGR 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 188 ADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLPRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTL 267
Cdd:cd02054   160 ADSQAQLLLSTVVGTFTAPGLDLKQPFVQGLADFTPASFPRSLDFTEPEVAEEKINRFIQAVTGWKMKSSLKGVSPDSTL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 268 AFNTYVHFQGKMKGFSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHYASDLDKV 347
Cdd:cd02054   240 LFNTYVHFQGKMRGFSQLTSPQEFWVDNSTSVSVPMMSGTGTFQHWSDAQDNFSVTQVPLSERATLLLIQPHEASDLDKV 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 348 EGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIRVGEVLNSIFFELEADE 427
Cdd:cd02054   320 EALLFQNNILTWIKNLSPRTIELTLPQLSLSGSYDLQDLLAQMKLPALLGTEANLQKSSKENFRVGEVLNSIVFELSAGE 399
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1859470595 428 REPTESTQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANPLS 474
Cdd:cd02054   400 REVQESTEQGNKPEVLKVTLNRPFLFAVYEQNSNALHFLGRVTNPTS 446
SERPIN smart00093
SERine Proteinase INhibitors;
106-472 3.74e-94

SERine Proteinase INhibitors;


Pssm-ID: 214513 [Multi-domain]  Cd Length: 359  Bit Score: 289.08  E-value: 3.74e-94
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  106 FRIYGMHSELWGvvHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDkncTSRLDAHKvlsALQAVQGLLVAq 185
Cdd:smart00093   1 FDLYKELAKESP--DKNIFFSPVSISSALAMLSLGAKGSTATQILEVLGFNLTE---TSEADIHQ---GFQHLLHLLNR- 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  186 gradSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVvLPRSLDFTE-LDVAAEKIDRFMQAVTGWKTGCSLMGASVD 264
Cdd:smart00093  72 ----PDSQLELKTANALFVDKSLKLKDSFLEDIKKLYGA-EVQSVDFSDkAEEAKKQINDWVEKKTQGKIKDLLSDLDSD 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  265 STLAFNTYVHFQGKMKGFSLLAEPQE--FWVDNSTSVSVPMLSGMGT-FQHWSDIQDNFSVTQVPFTESACLLLIQPHYa 341
Cdd:smart00093 147 TRLVLVNAIYFKGKWKTPFDPELTREedFHVDETTTVKVPMMSQTGRtFNYGHDEELNCQVLELPYKGNASMLIILPDE- 225
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  342 SDLDKVEGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIF 420
Cdd:smart00093 226 GGLEKLEKALTPETLKKWMKSLTKRSVELYLPKFKIEGTYDLKDVLEKLGITDLFSNKADLSGISEDKdLKVSKVLHKAV 305
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1859470595  421 FELEADEREPTESTQQLNKPEVL--EVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:smart00093 306 LEVNEEGTEAAAATGVIAVPRSLppEFKANRPFLFLIRDNKTGSILFMGKVVNP 359
Serpin pfam00079
Serpin (serine protease inhibitor); Structure is a multi-domain fold containing a bundle of ...
99-472 1.24e-79

Serpin (serine protease inhibitor); Structure is a multi-domain fold containing a bundle of helices and a beta sandwich.


Pssm-ID: 459662 [Multi-domain]  Cd Length: 368  Bit Score: 252.16  E-value: 1.24e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  99 MLANFLGFRIYGMHSELWGvvHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRlDAHKVLSALQAv 178
Cdd:pfam00079   1 AANNDFAFDLYKELAKENP--DKNIFFSPLSISSALAMLYLGAKGETAEQLLEALGFNELDEEDVHQ-GFQKLLQSLNK- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 179 qgllvaqgradSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLpRSLDFTELDVAAEKIDRFMQAVTGWKTGcSL 258
Cdd:pfam00079  77 -----------PDKGYELKLANALFVEKGLKLKPDFLQLAKKYYGAEV-ESVDFSDPSEARKKINSWVEKKTNGKIK-DL 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 259 MGASVDST--LAFNTYVHFQGKMK-GFSLLA-EPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLL 334
Cdd:pfam00079 144 LPEGLDSDtrLVLVNAIYFKGKWKtPFDPENtREEPFHVNEGTTVKVPMMSQEGQFRYAEDEELGFKVLELPYKGNLSML 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 335 LIQPHYASDLDKVEGLTFQQNSLNWMKKLSPRTIH-LTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSND-RIRV 412
Cdd:pfam00079 224 IILPDEIGGLEELEKSLTAETLLEWTSSLKMRKVReLSLPKFKIEYSYDLKDVLKKLGITDAFSEEADFSGISDDePLYV 303
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1859470595 413 GEVLNSIFFELEADEREPTEST-----QQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:pfam00079 304 SEVVHKAFIEVNEEGTEAAAATgvvvvLLSAPPSPPEFKADRPFLFFIRDNKTGSILFLGRVVNP 368
serpin cd00172
SERine Proteinase INhibitors (serpin) family; SERine Proteinase INhibitors (serpins) exhibit ...
102-468 7.98e-48

SERine Proteinase INhibitors (serpin) family; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381000 [Multi-domain]  Cd Length: 365  Bit Score: 168.61  E-value: 7.98e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 102 NFLGFRIYGMHSElwGVVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNctsrlDAHKVLSALQAVQGl 181
Cdd:cd00172     3 NDFALDLYKQLAK--DNPDENIVFSPLSISTALSMLYLGARGETREELKKVLGLDSLDEE-----DLHSAFKELLSSLK- 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 182 lvaqgraDSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLpRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGA 261
Cdd:cd00172    75 -------SSNENYTLKLANRIFVDKGFELKEDFKDALKKYYGAEV-ESVDFSNPEEARKEINKWVEEKTNGKIKDLLPPG 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 262 SVDST--LAFNTYVHFQGK-MKGFSL-LAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFT-ESACLLLI 336
Cdd:cd00172   147 SIDPDtrLVLVNAIYFKGKwKKPFDPeLTRKEPFYLSDGKTVKVPMMHQKGKFKYAEDEDLGAQVLELPYKgDRLSMVII 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 337 QPHYASDLDKVEGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILH--TELNLQKLSNDRIRVGE 414
Cdd:cd00172   227 LPKEGDGLAELEKSLTPELLSKLLSSLKPTEVELTLPKFKLESSYDLKEVLKKLGITDAFSpgAADLSGISSNKPLYVSD 306
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1859470595 415 VLNSIFFELEADEREPTESTQQLNK-----PEVLEVTLNRPFLFAVYDQSATALHFLGR 468
Cdd:cd00172   307 VIHKAFIEVDEEGTEAAAATAVVIVlrsapPPPIEFIADRPFLFLIRDKKTGTILFMGR 365
serpinA2_PIL cd19550
serpin family A member 2, protease inhibitor 1-like; Protease inhibitor 1-like (also called ...
123-472 1.35e-26

serpin family A member 2, protease inhibitor 1-like; Protease inhibitor 1-like (also called serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2, ARGS, protease inhibitor 1 (alpha-1-antitrypsin)-like)/PIL, and alpha-1-antitrypsin-related protein/ATR) belongs to the serpin superfamily and is encoded by the SERPINA2 gene in humans. SERPINA2 was once thought to be a pseudogene, but recent evidence shows that it produces an active transcript. It is very similar in structure and function to SERPINA1. This family belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381018 [Multi-domain]  Cd Length: 363  Bit Score: 110.47  E-value: 1.35e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 123 TVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDkncTSRLDAHKVLsalqavQGLLVAQGRADSQAQLLLSTVVgv 202
Cdd:cd19550    22 ILFSPVSIAAAFAMLSLGTKGDTHTQILEGLRFNLKE---TPEAEIHKCF------QQLLNTLHQPDNQLQLTTGSSL-- 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 203 FTAPGLHLKQPFVQGLA-LYTPVVLPrsLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKMKG 281
Cdd:cd19550    91 FIDKNLKPVDKFLEGVKkLYHSEAIP--INFRDTEEAKKQINNYVEKETQRKIVDLVKDLDKDTALALVNYISFHGKWKD 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 282 ----FSLLAEPqeFWVDNSTSVSVPMLSGMGTFQ-HWSDiqdNFS--VTQVPFTESACLLLIQPhyasDLDKV----EGL 350
Cdd:cd19550   169 kfeaEHTVEED--FHVDEKTTVKVPMINRLGTFYlHRDE---ELSswVLVQHYVGNATAFFILP----DPGKMqqleEGL 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 351 TFQQnsLNWMKK-LSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIFFELEADER 428
Cdd:cd19550   240 TYEH--LSNILRhIDIRSANLHFPKLSISGTYDLKTILGKLGITKVFSNEADLSGITEEApLKLSKAVHKAVLTIDENGT 317
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1859470595 429 EPTESTQQLNKP--EVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19550   318 EVSGATDLEDKAwsRVLTIKFNRPFLIIIKDENTNFPLFMGKVVNP 363
serpinA_A1AT-like cd19549
serpin family A member, alpha-1-antitrypsin and similar proteins; This group contains proteins ...
126-472 1.47e-25

serpin family A member, alpha-1-antitrypsin and similar proteins; This group contains proteins similar to alpha-1-antitrypsin (also called A1AT, A1A, AAT, alpha1-proteinase inhibitor/A1PI, alpha1-antiproteinase/A1AP, and serum trypsin inhibitor), a protease inhibitor that belongs to the serpin superfamily. It is encoded in humans by the SERPINA1 gene. When the blood contains inadequate amounts of A1AT or functionally defective A1AT (such as in alpha-1 antitrypsin deficiency), neutrophil elastase is excessively free to break down elastin, degrading the elasticity of the lungs, which results in respiratory complications, such as chronic obstructive pulmonary disease. Normally, A1AT leaves its site of origin, the liver, and joins the systemic circulation; defective A1AT can fail to do so, building up in the liver, which results in cirrhosis. This group belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381017 [Multi-domain]  Cd Length: 367  Bit Score: 107.47  E-value: 1.47e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 126 SPTAVFGTLASLYLGALDHTADRLQAILGVpwkDKNCTSRLDAHkvlsalQAVQGLLVAQGRadsQAQLLLSTVVGVFTA 205
Cdd:cd19549    27 SPLSVSVALAALSLGARGETHQQLFSGLGF---NSSQVTQAQVN------EAFEHLLHMLGH---SEELDLSAGNAVFID 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 206 PGLHLKQPFVQGLALY--TPVVlprSLDFTELDVAAEKIDRFMQAVTGWKTgcSLMGASVD-STLAF-NTYVHFQGKM-K 280
Cdd:cd19549    95 DTFKPNPEFLKDLKHYylSEGF---TVDFTKTTEAADTINKYVAKKTHGKI--DKLVKDLDpSTVMYlISYIYFKGKWeK 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 281 GF-SLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHyaSDLDKVEGLTFQQNSLNW 359
Cdd:cd19549   170 PFdPKLTQEDDFHVDEDTTVPVQMMKRTDRFDIYYDQEISTTVLRLPYNGSASMMLLLPD--KGMATLEEVICPDHIKKW 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 360 MKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSND-RIRVGEVLNSIffELEADEREPTESTQQ-- 436
Cdd:cd19549   248 HKWMKRRSYDVSVPKFSVKTSYSLKDILSEMGMTDMFGDSADLSGISEEvKLKVSEVVHKA--TLDVDEAGATAAAATgi 325
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1859470595 437 ----LNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19549   326 eimpMSFPDAPTLKFNRPFMVLIVEHTTKSILFMGKITNP 365
serpinA cd19957
serpin family A; The clade A of the serpin superfamily includes the classical serine ...
124-472 8.89e-24

serpin family A; The clade A of the serpin superfamily includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381073 [Multi-domain]  Cd Length: 363  Bit Score: 102.29  E-value: 8.89e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVpwkdkNCTSRLDAhKVLSALQAVQGLLVAQGRadsqaQLLLSTVVGVF 203
Cdd:cd19957    23 FFSPVSISTALAMLSLGAKSTTRTQILEGLGF-----NLTETPEA-EIHEGFQHLLQTLNQPKK-----ELQLKIGNALF 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFVQGL-ALYTPVVLPrsLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGK-MKG 281
Cdd:cd19957    92 VDKQLKLLKKFLEDAkKLYNAEVFP--TNFSDPEEAKKQINDYVKKKTHGKIVDLVKDLDPDTVMVLVNYIFFKGKwKKP 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 282 FSLLA-EPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPhyasDLDKVEGL--TFQQNSLN 358
Cdd:cd19957   170 FDPEHtREEDFFVDDNTTVKVPMMSQKGQYAYLYDRELSCTVLQLPYKGNASMLFILP----DEGKMEQVeeALSPETLE 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 359 -WMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIffELEADER--EPTEST 434
Cdd:cd19957   246 rWNRSLRKSQVELYLPKFSISGSYKLEDILPQMGISDLFTNQADLSGISEQSnLKVSKVVHKA--VLDVDEKgtEAAAAT 323
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1859470595 435 ----QQLNKPEVLEVtlNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19957   324 gveiTPRSLPPTIKF--NRPFLLLIYEETTGSILFLGKVVNP 363
serpinA11 cd19557
serpin family A member 11; Serpin A11, in rats also called liver regeneration-related protein ...
100-474 3.27e-22

serpin family A member 11; Serpin A11, in rats also called liver regeneration-related protein LRRG023, is a serpin encoded by the gene SERPINA11. It maps on chromosome 14, at 14q32.13 and is strongly expressed in the human liver. The function of this protein is unknown. It belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381025 [Multi-domain]  Cd Length: 373  Bit Score: 97.80  E-value: 3.27e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 100 LANFlGFRIYgmhSELWGVVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDkncTSRLDAHkvlsalQAVQ 179
Cdd:cd19557     5 ITNF-ALRLY---KQLAEEAPGNILFSPVSLSSTLALLSLGAHADTQAQILESLGFNLTE---TPAADIH------RGFQ 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 180 GLLVAQGRADSQAQLLLSTvvGVFTAPGLHLKQPFVQGLA-LYTPVVLprSLDFTELDVAAEKIDRFMQAVT-GWKTGCs 257
Cdd:cd19557    72 SLLHTLDLPSPKLELKLGH--SLFLDRQLKPQQRFLDSAKeLYGALAF--SANFTEAAATGQQINDLVRKQTyGQVVGC- 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 258 LMGASVDSTLAFNTYVHFQGKMKG-FS-LLAEPQE-FWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLL 334
Cdd:cd19557   147 LPEFSQDTLMVLLNYIFFKAKWKHpFDrYQTRKQEsFFVDQRTSLRIPMMRQKEMHRFLYDQEASCTVLQIEYSGTALLL 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 335 LIQPHyASDLDKVEGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIR-VG 413
Cdd:cd19557   227 LVLPD-PGKMQQVEAALQPETLRRWGQRFLPSLLDLHLPRFSISATYNLEEILPLIGLTNLFDLEADLSGIMGQLNKtVS 305
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1859470595 414 EVLNSIFFELEADEREPTESTQQLNKPEVLEVT------LNRPFLFAVYDQSATALHFLGRVANPLS 474
Cdd:cd19557   306 RVSHKAMVDMNEKGTEAAAASGLLSQPPSLNMTsaphahFNRPFLLLLWEVTTQSLLFLGKVVNPAA 372
serpinA_A1AT-like cd19548
serpin family A member, alpha-1-antitrypsin and similar serpin proteins in birds and reptiles; ...
187-472 2.77e-20

serpin family A member, alpha-1-antitrypsin and similar serpin proteins in birds and reptiles; The alpha-1-antitrypsin family has a variety of different members of sauropsida belonging to the clade A of the serpin superfamily. This branch includes members from zebra finch, green anole, king cobra, gekko, crocodile, and central bearded dragon. Alpha-1-antitrypsin (also called A1AT, A1A, AAT, alpha1-proteinase inhibitor/A1PI, alpha1-antiproteinase/A1AP, and serum trypsin inhibitor) is a protease inhibitor. Clade A includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381016 [Multi-domain]  Cd Length: 370  Bit Score: 91.98  E-value: 2.77e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 187 RADSQAQLLLSTvvGVFTAPGLHLKQPFVQGL-ALYTPVVLprSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDS 265
Cdd:cd19548    83 RPDSEAQLNIGN--ALFIEESLKLLQKFLDDAkELYEAEGF--STNFQNPTEAEKQINDYVENKTHGKIVDLVKDLDPDT 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 266 TLAFNTYVHFQGKM-KGFSL-LAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHyASD 343
Cdd:cd19548   159 VMVLVNYIFFKGYWeKPFDPeSTRERDFFVDANTTVKVPMMHRDGYYKYYFDEDLSCTVVQIPYKGDASALFILPD-EGK 237
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 344 LDKVEGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIFFE 422
Cdd:cd19548   238 MKQVEAALSKETLSKWAKSLRRQRINLSIPKFSISTSYDLKDLLQKLGVTDVFTDNADLSGITGERnLKVSKAVHKAVLD 317
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1859470595 423 L-----EADEREPTESTQQLNKPevlEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19548   318 VhesgtEAAAATAIEIVPTSLPP---EPKFNRPFLVLIVDKLTNSILFLGKIVNP 369
serpinA6_CBG cd19554
serpin family A member 6, corticosteroid-binding globulin; Corticosteroid-binding globulin ...
123-473 5.96e-20

serpin family A member 6, corticosteroid-binding globulin; Corticosteroid-binding globulin (CBG, also known as transcortin) is encoded by the SERPINA6 gene in humans which encodes an alpha-globulin with corticosteroid-binding properties. It is produced in the liver. CBG binds several steroid hormones at high rates including cortisol, cortisone, deoxycorticosterone (DOC), corticosterone, aldosterone, progesterone, and 17a-hydroxyprogesterone. This family belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381022 [Multi-domain]  Cd Length: 373  Bit Score: 91.28  E-value: 5.96e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 123 TVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDkncTSRLDAHKvlsALQAVQGLLvaqGRADSQAQLLLSTVVgv 202
Cdd:cd19554    31 IFISPVSISMALAMLSLGACGHTRTQLLQGLGFNLTE---ISEAEIHQ---GFQHLHHLL---RESDTSLEMTMGNAL-- 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 203 FTAPGLHLKQPFVQGLA-LYTPVVLPrsLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKMK- 280
Cdd:cd19554   100 FLDQSLELLESFSADIKhYYESEALA--TDFQDWATASRQINEYVKNKTQGKIVDLFSELDSPATLILVNYIFFKGTWEh 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 281 GFSLLAEPQE-FWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHyASDLDKVEGLTFQQNSLNW 359
Cdd:cd19554   178 PFDPESTREEnFYVNETTVVKVPMMFQSSTIKYLHDSELPCQLVQLDYVGNGTVFFILPD-KGKMDTVIAALSRDTIQRW 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 360 MKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLS-NDRIRVGEVLNSIFFELE---ADEREPTESTQ 435
Cdd:cd19554   257 SKSLTSSQVDLYIPKVSISGAYDLGDILEDMGIADLFTNQTDFSGITqDAQLKLSKVVHKAVLQLDekgVEAAAPTGSTL 336
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1859470595 436 QLnKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANPL 473
Cdd:cd19554   337 HL-RSEPLTLRFNRPFIIMIFDHFTWSSLFLGKVVNPA 373
serpinA5_PCI cd19553
serpin family A member 5, protein C inhibitor; Protein C inhibitor (PCI/PROCI, also called ...
126-472 1.13e-19

serpin family A member 5, protein C inhibitor; Protein C inhibitor (PCI/PROCI, also called PAI3, plasminogen activator inhibitor-3/PLANH3, plasma serine protease inhibitor) has many biological functions. It acts as a pro-coagulant in blood and in the seminal vesicles, it is required for spermatogenesis. It is a member of the clade A serpin family that includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381021 [Multi-domain]  Cd Length: 364  Bit Score: 90.21  E-value: 1.13e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 126 SPTAVFGTLASLYLGALDHTADRLQAILGV----PWKDKnctsrldAHKvlsalqAVQGLLVAQGRADSQAQLLLSTvvG 201
Cdd:cd19553    25 SPLSISMSLAMLSLGAGSSTKAQILEGLGLnpqkGSEEQ-------LHR------GFQQLLQELNQPRDGFQLSLGN--A 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 202 VFTAPGLHLKQPFVQGL-ALYTPVVLPrsLDFTELDVAAEKIDRFMQAVTGWKTgCSLMgASVDST--LAFNTYVHFQGK 278
Cdd:cd19553    90 LFTDLVVDIQDTFLSAMkTLYLADTFP--TNFEDPAGAKKQINDYVAKQTKGKI-VDLI-KNLDSTtvMVMVNYIFFKAK 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 279 MK-GFSLL-AEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHYASdLDKVEGLTFQQNS 356
Cdd:cd19553   166 WEtSFNPKgTQEQDFYVTPETVVQVPMMNREDQYHYLLDRNLSCRVVGVPYQGNATALFILPSEGK-MEQVENGLSEKTL 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 357 LNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSN-DRIRVGEVLNSIFFELEADEREPTESTQ 435
Cdd:cd19553   245 RKWLKMFRKRQLNLYLPKFSIEGSYQLEKVLPKLGIRDVFTSHADLSGISNhSNIQVSEMVHKAVVEVDESGTRAAAATG 324
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1859470595 436 QL-----NKPEVLEVTLNRPFLFAVYDQSatALHFLGRVANP 472
Cdd:cd19553   325 MVftfrsARLNSQRIVFNRPFLMFIVENS--NILFLGKVTRP 364
serpinA16_HongrES1-like cd19587
serpin family A member 16, HongrES1 and similar proteins; HongrES1 is an epididymis-specific ...
202-472 1.33e-19

serpin family A member 16, HongrES1 and similar proteins; HongrES1 is an epididymis-specific secretory protein and is encoded by the SERPINA16 gene. It is one of several potential decapacitation factors of rodents, including a 40-kDa glycoprotein, phosphatidylethanolamine-binding protein 1 (PEBP1), a cysteine-rich secretory protein 1, an acrosome-stabilizing factor, SVA, SVS2, and SPINKL. In humans, some potential decapacitation factors that have been reported are glycodelin-S, semenogelin I, a 130-kDa glycoprotein, and some mannosyl glycopeptides. Decapitation factors are removed from the sperm head surface during the capacitation process and are able to reverse sperm capacitation. The clade A of the serpin superfamily includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381053 [Multi-domain]  Cd Length: 373  Bit Score: 90.24  E-value: 1.33e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 202 VFTAPGLHLKQPFVQ-GLALY-TPVVLprsLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKM 279
Cdd:cd19587    97 LFLDKRRKLARKFVQtAQSLYhTEVVL---ISFKNYGTARKQMDLAIRKKTHGKIEKLLQILKPHTVLILANYIFFKGKW 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 280 KGF--SLLAEPQEFWVDNSTSVSVPMLSGMGTFQ--HWSDIQDNfsVTQVPFTESACLLLIQPHYASdLDKVEGLTFQQN 355
Cdd:cd19587   174 KYRfdPKLTEMRPFSVSEGLTVPVPMMQRLGWFQlqYFSHLHSY--VLQLPFTCNITAVFILPDDGK-LKEVEEALMKES 250
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 356 SLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAIL--HTELN---LQKLSndrIRVGEVLNSIFFELEAD--ER 428
Cdd:cd19587   251 FETWTQPFPSSRRRLYFPKFSLPVNLQLDQLVPVNSILDIFsyHMDLSgisLQTAP---MRVSKAVHRVELTVDEDgeEK 327
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1859470595 429 EPTESTQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19587   328 EDITDFRFLPKHLIPALHFNRPFLLLIFEEGSHNLLFMGKVVNP 371
serpinA1_A1AT cd02056
serpin family A member 1, alpha-1-antitrypsin; Alpha-1-antitrypsin (also called A1AT, A1A, AAT, ...
125-472 1.73e-19

serpin family A member 1, alpha-1-antitrypsin; Alpha-1-antitrypsin (also called A1AT, A1A, AAT, alpha1-proteinase inhibitor/A1PI, alpha1-antiproteinase/A1AP, proteinase inhibitor/PI, and serum trypsin inhibitor) is a protease inhibitor that belongs to the serpin superfamily. It is encoded in humans by the SERPINA1 gene. When the blood contains inadequate amounts of A1AT or functionally defective A1AT (such as in alpha-1 antitrypsin deficiency), neutrophil elastase is excessively free to break down elastin, degrading the elasticity of the lungs, which results in respiratory complications, such as chronic obstructive pulmonary disease. Normally, A1AT leaves its site of origin, the liver, and joins the systemic circulation; defective A1AT fails to do so, building up in the liver, which results in cirrhosis. This family contains other A1AT-like members of clade A of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381012 [Multi-domain]  Cd Length: 368  Bit Score: 89.77  E-value: 1.73e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 125 LSPTAVFGTLASLYLGALDHTadRLQAILGVpwkDKNCT--SRLDAHkvlsalQAVQGLLVAQGRADSQAQLllSTVVGV 202
Cdd:cd02056    27 FSPVSIATAFAMLSLGTKGDT--HTQILEGL---QFNLTeiAEADIH------KGFQHLLQTLNRPDSQLQL--TTGNGL 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 203 FTAPGLHLKQPFVQGL-ALYTPVVLPrsLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKM-K 280
Cdd:cd02056    94 FLNENLKLVDKFLEDVkNLYHSEAFS--VNFADTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALVNYIFFKGKWeK 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 281 GFSLLA-EPQEFWVDNSTSVSVPMLSGMGTF--QHWSDIQDnfSVTQVPFTESACLLLIQPhyasDLDKVEGLtfqQNSL 357
Cdd:cd02056   172 PFEVEHtEEEDFHVDEATTVKVPMMNRLGMFdlHHCSTLSS--WVLLMDYLGNATAIFLLP----DEGKMQHL---EDTL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 358 N------WMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIFfeLEADER-- 428
Cdd:cd02056   243 TkeiiskFLENRERRSANLHLPKLSISGTYDLKTVLGSLGITKVFSNGADLSGITEEApLKLSKALHKAV--LTIDEKgt 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1859470595 429 EPTESTQQLNKPEVL--EVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd02056   321 EAAGATVLEAIPMSLppEVKFNKPFLFLIYEHNTKSPLFVGKVVNP 366
serpinA7_TBG cd19555
serpin family A member 7, thyroxine-binding globulin; Thyroxine-binding globulin (TBG, also ...
125-472 2.11e-19

serpin family A member 7, thyroxine-binding globulin; Thyroxine-binding globulin (TBG, also called T4-binding globulin) is a globulin that binds thyroid hormones in circulation. It is one of three transport proteins (along with transthyretin and serum albumin) responsible for carrying the thyroid hormones thyroxine (T4) and triiodothyronine (T3) in the bloodstream. TBG is synthesized primarily in the liver and is a serpin with no inhibitory function like many other members of this class of proteins. There are two forms of inherited thyroxine-binding globulin deficiency: the complete form (TBG-CD), which results in a total loss of thyroxine-binding globulin, and the partial form (TBG-PD), which reduces the amount of this protein or alters its structure. Neither of these conditions causes any problems with thyroid function, but it can be mistaken for more serious thyroid disorders, such as hypothyroidism. This family belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381023 [Multi-domain]  Cd Length: 379  Bit Score: 89.67  E-value: 2.11e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 125 LSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKnctsrldahKVLSALQAVQGLLVAQGRADSQAQLLLSTVVGVft 204
Cdd:cd19555    32 FSPVSISAALAMLSFGACSSTQTQILETLGFNLTDT---------PMVEIQQGFQHLICSLNFPKKELELQMGNALFI-- 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 205 apGLHLKqPFVQGL----ALYTPVVLprSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKMK 280
Cdd:cd19555   101 --GKQLK-PLAKFLddvkTLYETEVF--STDFSNVSAAQQEINSHVEMQTKGKIVGLIQDLKPNTIMVLVNYIHFKAQWA 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 281 G---FSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHyASDLDKVEGLTFQQNSL 357
Cdd:cd19555   176 NpfdPSKTEESSSFLVDKTTTVQVPMMHQMEQYYHLVDMELNCTVLQMDYSKNALALFVLPK-EGQMEWVEAAMSSKTLK 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 358 NWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQ----------AELPAIlhTELNLQKLSNDR----IRVGEvlnsiffel 423
Cdd:cd19555   255 KWNRLLQKGWVDLFVPKFSISATYDLGATLLKmgiqdafaenADFSGL--TEDNGLKLSNAAhkavLHIGE--------- 323
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1859470595 424 EADEREPTESTQQLNKPEVLE----VTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19555   324 KGTEAAAVPEVELSDQPENTFlhpiIQIDRSFLLLILEKSTRSILFLGKVVDP 376
serpinA10_PZI cd02055
serpin family A member 10, protein Z-dependent protease inhibitor; Protein Z-dependent ...
101-472 5.10e-19

serpin family A member 10, protein Z-dependent protease inhibitor; Protein Z-dependent protease inhibitor (ZPI) is a member of the serpin superfamily of proteinase inhibitors (clade A10). ZPI inhibits coagulation factor Xa, dependent on protein Z (PZ), a vitamin K-dependent plasma protein. ZPI also inhibits factor XIa in a process that does not require PZ. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381011 [Multi-domain]  Cd Length: 380  Bit Score: 88.46  E-value: 5.10e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 101 ANFlGFRIY---GMHSElwgvvhGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNctsrLDAHKVLSALQA 177
Cdd:cd02055    17 SDF-GFNLYrkiASRHD------DNVFFSPLSLSLALAALLLGAGGSTREQLLQGLNLQALDRD----LDPDLLPDLFQQ 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 178 VQGLlVAQGRADSQAQlllstVVGVFTAPGLHLKQPFVQGLALY--TPVVlprSLDFTELDVAAEKIDRFMQAVTGWKTg 255
Cdd:cd02055    86 LREN-ITQNGELSLDQ-----GSALFIHQDFEVKETFLNLSKKYfgAEVQ---SVDFSNTSQAKDTINQYIRKKTGGKI- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 256 cSLMGASVD--STLAFNTYVHFQGKMK-GF-SLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDiqDNFSVT--QVPFTE 329
Cdd:cd02055   156 -PDLVDEIDpqTKLMLVDYIFFKGKWLlPFnPSFTEDERFYVDKYHIVQVPMMFRADKFALAYD--KSLKCGvlKLPYRG 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 330 SACLLLIQPHYASDLDKVE-GLT---FQQnslnWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKL 405
Cdd:cd02055   233 GAAMLVVLPDEDVDYTALEdELTaelIEG----WLRQLKKTKLEVQLPKFKLEQSYSLHELLPQLGITQVFQDSADLSGL 308
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1859470595 406 SNDR-IRVGEVLNSIFfeLEADER--EPTESTQQLNKPEVL--EVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd02055   309 SGERgLKVSEVLHKAV--IEVDERgtEAAAATGSEITAYSLppRLTVNRPFIFIIYHETTKSLLFMGRVVDP 378
serpinA3_A1AC cd19551
serpin family A member 3, alpha 1-antichymotrypsin; Alpha 1-antichymotrypsin (a1AC/A1AC/a1ACT ...
124-472 9.63e-19

serpin family A member 3, alpha 1-antichymotrypsin; Alpha 1-antichymotrypsin (a1AC/A1AC/a1ACT/AACT) is an alpha globulin glycoprotein that is a member of the serpin superfamily. In humans, it is encoded by the SERPINA3 gene. It inhibits the activity of proteases, such as cathepsin G that is found in neutrophils, and chymases found in mast cells, by cleaving them into a different shape or conformation. This activity protects some tissues, such as the lower respiratory tract, from damage caused by proteolytic enzymes. Deficiency of this protein has been associated with liver disease. Mutations have been identified in patients with Parkinson disease and chronic obstructive pulmonary disease. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381019 [Multi-domain]  Cd Length: 382  Bit Score: 87.71  E-value: 9.63e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTadrLQAILGVPWKDKNCTSRLDAHkvlsalQAVQGLLVAQGRADSQAQLllSTVVGVF 203
Cdd:cd19551    36 IFSPLSISTALAFLSLGAKGNT---LTEILEGLKFNLTETPEADIH------QGFQHLLQTLSQPSDQLQL--SVGNAMF 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFVQG-LALYTPVVLprSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKMKgf 282
Cdd:cd19551   105 VEKQLQLLAEFKEKaRALYQAEAF--TTDFQDPTAAKKLINDYVKNKTQGKIKELISDLDPRTSMVLVNYIYFKAKWK-- 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 283 sLLAEPQ-----EFWVDNSTSVSVPMLS-GMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPhyasDLDKVEGL--TFQQ 354
Cdd:cd19551   181 -MPFDPDdtfqsEFYLDKKRSVKVPMMKiENLTTPYFRDEELSCTVVELKYTGNASALFILP----DQGKMQQVeaSLQP 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 355 NSL-NWMKKLSPRTIH-LTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIffELEADErEPT 431
Cdd:cd19551   256 ETLkRWRDSLRPRRIDeLYLPKFSISSDYNLEDILPELGIREVFSQQADLSGITGAKnLSVSQVVHKA--VLDVAE-EGT 332
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1859470595 432 E----------STQQLNKPEVleVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19551   333 EaaaatgvkivLTSAKLKPII--VRFNRPFLVAIVDTDTQSILFLGKVTNP 381
serpinJ_IRS-2-like cd19577
serpin family J, Ixodes ricinus serpin-2 (IRS-2); The serpin family J clade contains serpins ...
102-472 1.57e-18

serpin family J, Ixodes ricinus serpin-2 (IRS-2); The serpin family J clade contains serpins from the Chelicerates. This model includes serpins from the Japanese horseshoe crab, mites, ticks, and spiders. The Limulus intracellular coagulation inhibitor, designated LICI, was isolated from hemocytes of the Japanese horseshoe crab. It blocks the amidolytic activities of Limulus lipopolysaccharide-sensitive serine protease, factor C and also inhibits human alpha-thrombin, rat salivary kallikrein, bovine plasmin, and trypsin but not Limulus clotting enzyme, Limulus factor B, bovine factor Xa, human factor XIa, human tissue plasminogen activator, human urokinase, chymotrypsin, elastase, and papain. Glycosaminoglycans such as heparin and heparan sulfate had no effect on the inhibitory activity. The castor bean tick, Ixodes ricinus serpin-2 (IRS-2) whose structure has been solved, unlike that of the LICI, is found in the saliva of the tick and primarily targets 2 proinflammatory serine proteases: cathepsin G and mast cell chymase, and in higher molar excess, thrombin. It also blocks cathepsin G- and thrombin-induced platelet aggregation. Thus it has a dual role and can interfere with both inflammation and wound healing during tick feeding. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381043 [Multi-domain]  Cd Length: 372  Bit Score: 86.84  E-value: 1.57e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 102 NFLGFRIYgmhSELWGVVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPwkdkncTSRLDAHKVLSALQAVQGL 181
Cdd:cd19577     7 NQFGLNLL---KELPSENEENVFFSPYSLSTALGMVYAGARGETAKELSSVLGYE------SAGLTRDDVLSAFRQLLNL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 182 LvaqgrADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLA-LYTPVVlpRSLDFT-ELDVAAEKIDRFMQavtgWKTG---C 256
Cdd:cd19577    78 L-----NSTSGNYTLDIANAVLVQEGLSVLDSYKRELEeYFDAEV--EEVDFAnDGEKVVDEINEWVK----EKTHgkiP 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 257 SLMGASVDST---LAFNTyVHFQGK-MKGF-SLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFT-ES 330
Cdd:cd19577   147 KLLEEPLDPStvlVLLNA-VYFKGTwKTPFdPKLTRKGPFYNNGGTPKNVPMMHLRGRFPYAYDPDLNVDALELPYKgDD 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 331 ACLLLIQPHYASDLDKVEgltfqqNSLNW------MKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQK 404
Cdd:cd19577   226 ISMVILLPRSRNGLPALE------QSLTSdklddiLSQLRERKVKVTLPKFKLEYSYDLKEPLKALGLKSAFSESADLSG 299
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1859470595 405 LSNDR-IRVGEVLNSIFfeLEADErEPTE-------STQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19577   300 ITGDRdLYVSDVVHKAV--IEVNE-EGTEaaavtgvVIVVRSLAPPPEFTADHPFLFFIRDKRTGLILFLGRVNEL 372
SERPIN COG4826
Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones];
88-472 6.32e-18

Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443854 [Multi-domain]  Cd Length: 411  Bit Score: 85.72  E-value: 6.32e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  88 TEDKLRAAMVGMLANFlGFRIYgmhSELWG-VVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPwkdknctsrL 166
Cdd:COG4826    36 VDAADLAALVAANNAF-AFDLF---KELAKeEADGNLFFSPLSISSALAMTYNGARGETAEEMAKVLGFG---------L 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 167 DAHKVLSALQAvqgLLVAQGRADSQAQLllSTVVGVFTAPGLHLKQPFVQGLALY--TPVvlpRSLDFTELDVAAEKIDR 244
Cdd:COG4826   103 DLEELNAAFAA---LLAALNNDDPKVEL--SIANSLWAREGFTFKPDFLDTLADYygAGV---TSLDFSNDEAARDTINK 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 245 fmqavtgW---KTGC---SLMGASVDS-TLAF--NTyVHFQGK-MKGFSLLA-EPQEFWVDNSTSVSVPMLSGMGTFQHW 313
Cdd:COG4826   175 -------WvseKTNGkikDLLPPAIDPdTRLVltNA-IYFKGAwATPFDKSDtEDAPFTLADGSTVQVPMMHQTGTFPYA 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 314 SDiqDNFSVTQVPFTESAC-LLLIQPHYASDLDKVE-GLTfQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAE 391
Cdd:COG4826   247 EG--DGFQAVELPYGGGELsMVVILPKEGGSLEDFEaSLT-AENLAEILSSLSSQEVDLSLPKFKFEYEFELKDALKALG 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 392 LPAILHTELNLQKLSNDR-IRVGEVLNSIFfeLEADErEPTE---STQ-----QLNKPEVLEVTLNRPFLFAVYDQSATA 462
Cdd:COG4826   324 MPDAFTDAADFSGMTDGEnLYISDVIHKAF--IEVDE-EGTEaaaATAvgmelTSAPPEPVEFIADRPFLFFIRDNETGT 400
                         410
                  ....*....|
gi 1859470595 463 LHFLGRVANP 472
Cdd:COG4826   401 ILFMGRVVDP 410
serpinA12_vaspin cd19558
serpin family A member 12, visceral adipose tissue-derived serpin; Vaspin, also called ...
229-472 1.21e-17

serpin family A member 12, visceral adipose tissue-derived serpin; Vaspin, also called visceral adipose tissue-derived serpin or serpinA12, was identified as an adipokine with insulin-sensitizing effects and has been shown to significantly reduce blood glucose concentrations in various mouse models. As such, vaspin may represent a novel treatment tool for diabetes intervention strategies. Human kallikrein 7 (hK7), which cleaves human insulin within A and B chain, was the first protease target of vaspin inhibited by classical serpin mechanism with high specificity in vitro. This family belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381026 [Multi-domain]  Cd Length: 372  Bit Score: 84.44  E-value: 1.21e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 229 SLDFTELDVAAEKIDRFMQAVTGWKTgcSLMGASVDS--TLAFNTYVHFQGK-MKGFS-LLAEPQEFWVDNSTSVSVPML 304
Cdd:cd19558   125 LTNFQDLEMAQKQINDYISQKTHGKI--NNLVKNIDPgtVMLLANYIFFQARwKHEFDpKQTKEEDFFLEKNKSVKVPMM 202
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 305 SGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHyASDLDKVE-GL---TFQQnslnWMKKLSPRTIHLTMPQLVLQGS 380
Cdd:cd19558   203 FRRGIYQVGYDDQLSCTILEIPYKGNITATFILPD-EGKLKHLEkGLqkdTFAR----WKTLLSRRVVDVSVPKLHISGT 277
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 381 YDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIffELEADEREpTE-----STQQLNKPEVLEVTLNRPFLFA 454
Cdd:cd19558   278 YDLKKTLSYLGVSKIFEEHGDLTKIAPHRsLKVGEAVHKA--ELKMDEKG-TEgaagtGAQTLPMETPLLVKLNKPFLLI 354
                         250
                  ....*....|....*...
gi 1859470595 455 VYDQSATALHFLGRVANP 472
Cdd:cd19558   355 IYDDKMPSVLFLGKIVNP 372
serpinH1_CBP1 cd02046
serpin family H member 1, collagen-binding protein 1; Collagen-binding protein 1 (CBP1, also ...
291-472 5.07e-17

serpin family H member 1, collagen-binding protein 1; Collagen-binding protein 1 (CBP1, also called heat shock protein 47/hsp47 or colligin), because of its collagen binding ability, is a chaperone specific protein for the correct folding of types I-V procollagen in the endoplasmic reticulum (ER). It is induced under stress conditions through heat shock element-heat shock factor interaction and has been shown to be essential for collagen biosynthesis. Hsp47 transiently binds to procollagen in the ER, dissociates in the cis-Golgi or ER-Golgi intermediate compartment, and is then transported back to the ER via its RDEL retention sequence. Hsp47 recognizes collagenous (Gly-Xaa-Arg) repeats on triple-helical procollagen and can prevent local unfolding and/or aggregate formation of procollagen. Hsp47 is a non-inhibitory member of the SERPIN superfamily and corresponds to clade H. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381003 [Multi-domain]  Cd Length: 382  Bit Score: 82.63  E-value: 5.07e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 291 FWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTES-ACLLLIQPHYASDLDKVEGLTFQQNSLNWMKKLSPRTIH 369
Cdd:cd02046   189 FMVTRSYTVGVPMMHRTGLYNYYDDEKEKLQIVEMPLAHKlSSLIILMPHHVEPLERLEKLLTKEQLKTWMGKMQKKAVA 268
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 370 LTMPQLVLQGSYDLQDLLAQAELP-AILHTELNLQKLSNDR-IRVGEVLNSIFFELEAdEREPTEST----QQLNKPEVL 443
Cdd:cd02046   269 ISLPKGVVEVTHDLQKHLAGLGLTeAIDKNKADLSRMSGKKdLYLASVFHATAFEWDT-EGNPFDQDiygrEELRSPKLF 347
                         170       180
                  ....*....|....*....|....*....
gi 1859470595 444 EVtlNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd02046   348 YA--DHPFIFLVRDTQSGSLLFIGRLVRP 374
serpinB3_B4_SCCA1_2 cd19563
serpin family B members 3 and 4, squamous cell carcinoma antigens 1 and 2; Squamous cell ...
126-472 1.89e-16

serpin family B members 3 and 4, squamous cell carcinoma antigens 1 and 2; Squamous cell carcinoma antigen 1 (SCCA1, also called HsT1196 or protein T4-A) and squamous cell carcinoma antigen 2 (SCCA2, also called PI11 or leupin), which are encoded by the SERPINB3 and SERPINB4 genes, respectively, are members of the serpin family of serine protease inhibitors. SCCA1 is a so called cross-class serpin, inhibiting cysteine proteinases such as cathepsin S, K, L, and papain. SCCA2 inhibits chymotrypsin-like serine proteases including chymase, cathepsin G, and Der p1. Elevated levels of SCCA1 and SCCA2 have been detected in chronic inflammatory conditions involving the skin, especially atopic dermatitis (AD)and psoriasis, as well as in respiratory inflammatory diseases such as asthma, chronic obstructive pulmonary disease (COPD), and tuberculosis. They are both normally co-expressed in squamous epithelial cells of tongue, esophagus, tonsils, epidermal hair follicles, lung and uterus, and become highly up-regulated in squamous carcinomas of these organs. Diseases associated with SERPINB3 include anal cancer and cervical squamous cell carcinoma, whereas SERPINB4 include squamous cell carcinoma and chromosome 18Q deletion syndrome. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381030 [Multi-domain]  Cd Length: 390  Bit Score: 80.85  E-value: 1.89e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 126 SPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLDAHKV---LSALQAVQGLLVAQGRADSQAQLLLSTvvGV 202
Cdd:cd19563    30 SPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENTTGKAATYHVdrsGNVHHQFQKLLTEFNKSTDAYELKIAN--KL 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 203 FTAPGLHLKQPFVQGLALYTPVVLpRSLDFTEldvAAE----KIDRFMQAVTGWKTGCSLMGASV--DSTLAFNTYVHFQ 276
Cdd:cd19563   108 FGEKTYLFLQEYLDAIKKFYQTSV-ESVDFAN---APEesrkKINSWVESQTNEKIKNLIPEGNIgsNTTLVLVNAIYFK 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 277 GKM-KGFSLLAEPQE-FWVDNSTSVSVPMLSGMGTFqHWSDIQD-NFSVTQVPFT-ESACLLLIQPHYASDLDKVEGLTF 352
Cdd:cd19563   184 GQWeKKFNKEDTKEEkFWPNKNTYKSIQMMRQYTSF-HFASLEDvQAKVLEIPYKgKDLSMIVLLPNEIDGLQKLEEKLT 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 353 QQNSLNW--MKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIFFELEADERE 429
Cdd:cd19563   263 AEKLMEWtsLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNGDADLSGMTGSRgLVLSGVLHKAFVEVTEEGAE 342
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1859470595 430 PTESTQQL-------NKPEvlEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19563   343 AAAATAVVgfgssptSTNE--EFHCNHPFLFFIRQNKTNSILFYGRFSSP 390
serpinI2_pancpin cd19576
serpin family I member 2, pancpin; Pancpin (also called proteinase inhibitor 14/PI14 or ...
124-472 8.66e-16

serpin family I member 2, pancpin; Pancpin (also called proteinase inhibitor 14/PI14 or myoepithelium-derived serine protease inhibitor/MEPI ) is an inhibitory member of the serpin superfamily. It is downregulated in pancreatic and breast cancer, and is associated with acinar cell apoptosis and pancreatic insufficiency when absent in mice. Pancpin was found to inhibit pancreatic chymotrypsin and elastase. It is thought that pancpin protects pancreatic cells from the consequences of premature activation of their respective zymogens. This subgroup belongs to clade I of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381042 [Multi-domain]  Cd Length: 371  Bit Score: 78.74  E-value: 8.66e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTadrLQAILGVPWKDKNctsrlDAHKVLSALQAVQGLLVAQGRadsqaQLLLSTVVGVF 203
Cdd:cd19576    25 IFSPLGTTLILGMVQLGAKGTA---LQQIRKALKFQGT-----QAGEEFSVLKTLSSVISESKK-----EFTFNLANALY 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFVQG-LALYTPVVlpRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVD--STLAFNTYVHFQG--K 278
Cdd:cd19576    92 LQEGFQVKEQYLHSnKEFFNSAI--KLVDFQDSKASAEAISTWVERQTDGKIKNMFSSQDFNplTRMVLVNAIYFKGtwK 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 279 MKGFSLLAEPQEFWVDNSTSVSVPMLSG--MGTFQHWSDIQDNFSVTQVPFT-ESACLLLIQPHYASDLDKVEGLTFQQN 355
Cdd:cd19576   170 QKFRKEDTHLMEFTKKDGSTVKVPMMKAqvRTKYGYFSASSLSYQVLELPYKgDEFSLILILPAEGTDIEEVEKLVTAQL 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 356 SLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSND-RIRVGEVLNSIFFELEADEREPTEST 434
Cdd:cd19576   250 IKTWLSEMSEEDVEISLPRFKVEQKLDLKESLYSLNITEIFSGGCDLSGITDSsELYISQVFQKVFIEINEEGSEAAAST 329
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1859470595 435 qQLNKPEVLEVT-----LNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19576   330 -GMQIPAIMSLPqhrfvANHPFLFIIRHNLTGSILFMGRVMNP 371
serpinG1_C1-INH cd02050
serpin family G member 1, plasma proteinase C1 inhibitor; Plasma proteinase C1 inhibitor ...
124-469 5.78e-15

serpin family G member 1, plasma proteinase C1 inhibitor; Plasma proteinase C1 inhibitor (C1-INH/C1IN) is a protease inhibitor of the serpin family. It plays a pivotal role in regulating the activation of the classical complement pathway and of the contact system, via regulating bradykinin formation, inhibiting factor XII and kallikrein of the contact system, and via acting on factor XI in the coagulation cascade. This subgroup corresponds to clade G of the serpin superfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381006 [Multi-domain]  Cd Length: 362  Bit Score: 76.25  E-value: 5.78e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVPwKDKNCTsrldaHKVLSALQAVQGLLVAqgradSQaqlllstvvgVF 203
Cdd:cd02050    32 LFSPFSIAGLLTHLLLGARGKTKTNLESALSYP-KDFTCV-----HSALKGLKKKLALTSA-----SQ----------IF 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFV-QGLALY--TPVVLprsLDFTELDVaaEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKMK 280
Cdd:cd02050    91 YSPDLKLRETFVnQSRTFYdsRPQVL---SNNSEANL--EMINSWVAKKTNNKIKRLLDSLPSDTQLVLLNAVYFNGKWK 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 281 GFSLLAEPQ--EFWVDNSTSVSVPMLSGM---GTFQHWSDIQDNfsVTQVPFTESACL-LLIQPHYASDLDKVEG-LT-- 351
Cdd:cd02050   166 TTFDPKKTKlePFYKKNGDSIKVPMMYSKkypVAHFYDPNLKAK--VGRLQLSHNLSLvILLPQSLKHDLQDVEQkLTds 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 352 -FQQnSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHtELNLQKLS-NDRIRVGEVLNSIFFELEADERE 429
Cdd:cd02050   244 vFKA-MMEKLEGSKPQPTEVTLPKIKLDSSQDMLSILEKLGLFDLFY-DANLCGLYeDEDLQVSAAQHRAVLELTEEGVE 321
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1859470595 430 PTESTQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRV 469
Cdd:cd02050   322 AAAATAISFARSALSFEVQQPFLFLLWSDQAKFPLFMGRV 361
serpin42Da-like cd19601
serpins similar to Drosophila melanogaster Serpin 42Da; This subfamily is composed mainly of ...
124-468 8.59e-15

serpins similar to Drosophila melanogaster Serpin 42Da; This subfamily is composed mainly of insect serpins, including Drosophila melanogaster serpin 42Da. Serpins in insects function within development, wound healing and immunity. Serpin 42Da, previously serpin 4, is a serine protease inhibitor that is capable of remarkable functional diversity through the alternative splicing of four different reactive center loop exons. Insect serpins from stink bug, alfalfa leafcutting bee, red flour beetle, house fly, and brown planthopper are also included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381065 [Multi-domain]  Cd Length: 361  Bit Score: 75.63  E-value: 8.59e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLdaHKVLSALQAVQG--LLVAQGradsqaqlllstvvg 201
Cdd:cd19601    22 ICSPLSAHIVLAMAAYGARGETAEELRSVLHLPSDDESIAEGY--KSLIDSLNNVKSvtLKLANK--------------- 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 202 VFTAPGLHLKQPFVQGLALY--TPVVlprSLDFTELDVAAEKIDRFMQAVTGWKTGcSLMGASV---DSTLAF-NTyVHF 275
Cdd:cd19601    85 IYVAKGFELKPEFKSILTNYfrSEAE---NVDFSNSEEAAKTINSWVEEKTNNKIK-DLISPDDldeDTRLVLvNA-IYF 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 276 QGK-MKGFS-LLAEPQEFWVDNSTSVSVPMLSGMGTFqHWSDIQD-NFSVTQVPFTESA-CLLLIQPHYASDLDKVEglt 351
Cdd:cd19601   160 KGEwKKKFDkKNTKERPFHVDETTTKKVPMMYKKGKF-KYGELPDlDAKFIELPYKNSDlSMVIILPNEIDGLKDLE--- 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 352 fqqNSLNWM------KKLSPRTIHLTMPQLVLQGSYDLQDLLaqaelpailhTELNLQKL-----------SNDRIRVGE 414
Cdd:cd19601   236 ---ENLKKLnlsdllSSLRKREVELYLPKFKIESTIDLKDIL----------KKLGMKDMfsdganffsgiSDEPLKVSK 302
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1859470595 415 VLNSIFFELeaDErEPTES--------TQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGR 468
Cdd:cd19601   303 VIQKAFIEV--NE-EGTEAaaatgvvvVLRSMPPPPIEFRVDRPFLFAIVDKDTKTPLFVGR 361
serpinA4_KST cd19552
serpin family A member 4, kallistatin; Kallistatin (KST, also called proteinase inhibitor 4 ...
125-472 1.19e-14

serpin family A member 4, kallistatin; Kallistatin (KST, also called proteinase inhibitor 4/PI4, or kallikrein inhibitor/KAL) is a protein that in humans is encoded by the SERPINA4 gene. Kallistatin inhibits human amidolytic and kininogenase activities of tissue kallikrein. Heparin blocks kallistatin's complex formation with tissue kallikrein and abolishes its inhibitory effect on tissue kallikrein's activity. Kallistatin was found to be expressed in human liver, stomach, pancreas, kidney, aorta, testes, prostate, artery, atrium, ventricle, lung, renal proximal tubular cell, and a colonic carcinoma cell line T84. This family belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381020 [Multi-domain]  Cd Length: 383  Bit Score: 75.24  E-value: 1.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 125 LSPTAVFGTLASLYLGALDHTADRLQAILGVpwkdkNCT--SRLDAHkvlsalQAVQGLLVAQGRADSQaqllLSTVVG- 201
Cdd:cd19552    34 FSPLSISAALAMLSLGARSHTQSQILEGLGF-----NLTqlSEPEIH------EGFQHLQHTLNHPNQG----LETHVGn 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 202 -VFTAPGLHLKQPFVQGL-ALYTPVVLprSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKM 279
Cdd:cd19552    99 aLFLSQNLKLLPAFLNDIeAFYNAKVF--HTNFQDAVGAERLINDHVREETRGKISDLVSDLSRDVKMVLVNYIYFKALW 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 280 -KGF-SLLAEPQEFWVDNSTSVSVPMlsgMGTFQ--HW--SDIQDNFSVTQVPFTESACLLLIQPHyASDLDKVEGLTFQ 353
Cdd:cd19552   177 eKPFpPSRTAPSDFHVDENTVVQVPM---MLQDQeyHWylHDRRLPCSVLRMDYKGDATAFFILPD-QGKMREVEQVLSP 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 354 QNSLNWMKKLSPRTIH----LTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSN-DRIRVGEVLNSIffELEADEr 428
Cdd:cd19552   253 GMLMRWDRLLQNRYFYrkleLHFPKFSISGSYELDQILPELGFQDLFSPNADFSGITKqQKLRVSKSFHKA--TLDVNE- 329
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1859470595 429 EPTE------------STQQLNKPevleVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19552   330 VGTEaaaatslftvflSAQKKTRV----LRFNRPFLVAIFSTSTQSLLFLGKVVNP 381
serpinF1_PEDF cd02052
serpin family F member 1, Pigment epithelium-derived factor (PEDF); Pigment epithelium-derived ...
94-469 3.84e-14

serpin family F member 1, Pigment epithelium-derived factor (PEDF); Pigment epithelium-derived factor (PEDF, also called capsin or EPC-1) is an extracellular component of the retinal interphotoreceptor matrix, vitreous humor, and aqueous humor of the adult eye. PEDF is non-inhibitory member of the serpin superfamily. It exhibits neurotrophic, neuroprotective and antiangiogenic properties and is widely expressed in the developing and adult nervous systems. This subgroup corresponds to clade F1 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381008 [Multi-domain]  Cd Length: 373  Bit Score: 73.59  E-value: 3.84e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595  94 AAMVGmlaNFlGFRIYGMHSElwgVVHGATV-LSPTAVFGTLASLYLGALDHTADRLQAILGVpwkdkNCTSRLDAHKVL 172
Cdd:cd02052    15 AAAVS---NF-GYDLYRQLAS---ASPNANVfLSPLSVATALSQLSLGAGERTESQIHRALYY-----DLLNDPDIHATY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 173 SALQAVqglLVAQGRAdsqaqllLSTVVGVFTAPGLHLKQPFVQGLALYTPVvLPRSL-DFTELDVAaeKIDRFMQAVTG 251
Cdd:cd02052    83 KELLAS---LTAPRKS-------LKSASRIYLEKKLRIKSDFLNQVEKSYGA-RPRILtGNPRLDLQ--EINNWVQQQTE 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 252 WKTGCSLMGASVDSTLAFNTYVHFQGK-MKGF-SLLAEPQEFWVDNSTSVSVPMLSGMG-TFQHWSDIQDNFSVTQVPFT 328
Cdd:cd02052   150 GKIARFVKELPEEVSLLLLGAAYFKGQwLTKFdPRETSLKDFHLDESRTVQVPMMSDPNyPLRYGLDSDLNCKIAQLPLT 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 329 ESACLLLIQPhyasdlDKV-EGLTFQQNSLN------WMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAiLHTELN 401
Cdd:cd02052   230 GGVSLLFFLP------DEVtQNLTLIEESLTsefihdLVRELQTVKAVLTLPKLKLSYEGELKQSLQEMRLQS-LFTSPD 302
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1859470595 402 LQKLSNDRIRVGEVLNSIFFELEADERE----PTESTQQLNKPevLEVTLNRPFLFAVYDQSATALHFLGRV 469
Cdd:cd02052   303 LSKITSKPLKLSQVQHRATLELNEEGAKttpaTGSAPRQLTFP--LEYHVDRPFLFVLRDDDTGALLFIGKV 372
serpinD1_HCF2 cd02047
serpin family D member 1, Heparin cofactor II; Heparin cofactor II (HCF2/HC-II, also called ...
196-475 5.08e-14

serpin family D member 1, Heparin cofactor II; Heparin cofactor II (HCF2/HC-II, also called protease inhibitor leuserpin-2/hLS2) is a protein encoded by the SERPIND1 gene that inhibits thrombin, the final protease of the coagulation cascade. HCII is allosterically activated by binding to cell surface glycosaminoglycans (GAGs). The specificity of HCII for thrombin is conferred by a highly acidic hirudin-like N-terminal tail, which becomes available after GAG binding for interaction with the anion-binding exosite I of thrombin. HCII deficiency can lead to increased thrombin generation and a hypercoagulable state. This subgroup corresponds to clade D of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381004 [Multi-domain]  Cd Length: 449  Bit Score: 73.99  E-value: 5.08e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 196 LSTVVGVFTAPGLHLKQPFVQGLALYTpVVLPRSLDFTELDVAAeKIDRFMQAVTGWKTGCSLmgASVDSTLAFNTY--V 273
Cdd:cd02047   168 LRSVNDLYVQKQFPILESFKANLRTYY-FAEAQSVDFSDPAFIT-KANQRILKLTKGLIKEAL--ENVDPATLMMILncL 243
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 274 HFQGK-MKGFSL-LAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHYASDLDKVEG-L 350
Cdd:cd02047   244 YFKGTwENKFPVeMTHNRNFRLNEKEVVKVPMMQTKGNFLAAADHELDCDILQLPYVGNISMLIVVPHKLSGMKTLEAqL 323
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 351 TFQQNSlNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIRVGEVLNSIFfeLEADErEP 430
Cdd:cd02047   324 TPQVVE-KWQKSMTNRTREVLLPKFKLEKNYDLIEVLKEMGVTDLFTANGDFSGISDKDIIIDLFKHQGT--ITVNE-EG 399
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1859470595 431 TESTQQLN---KPEVLEV--TLNRPFLFAVYDQSATALHFLGRVANPLST 475
Cdd:cd02047   400 TEAAAVTTvgfMPLSTQNrfTVDRPFLFLIYEHRTSCLLFMGRVANPAKS 449
serpinF2_A2AP cd02053
serpin family F member 2, alpha2-antiplasmin inhibitor; Alpha2-antiplasmin inhibitor (A2AP/API, ...
123-472 6.92e-14

serpin family F member 2, alpha2-antiplasmin inhibitor; Alpha2-antiplasmin inhibitor (A2AP/API, also called plasmin inhibitor/PLI or alpha-2-antiplasmin) is the primary inhibitor of plasmin, a proteinase that digests fibrin, the main component of blood clots. Alpha2AP forms an inactive 1:1 stoichiometric complex with plasmin. It also rapidly crosslinks to fibrin during blood clotting by activated coagulation factor XIII, and as a consequence fibrin becomes more resistant to fibrinolysis. Therefore alpha2AP is important in modulating the effectiveness and persistence of fibrin with respect to its susceptibility to digestion and removal by plasmin. This subgroup corresponds to clade F2 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381009 [Multi-domain]  Cd Length: 363  Bit Score: 72.70  E-value: 6.92e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 123 TVLSPTAVFGTLASLYLGALDHTADRLQAILGVpwkdkncTSRLDAHKVLSALQAvqgllvaqgRADSQAqllLSTVVGV 202
Cdd:cd02053    32 VILSPLSIALALSQLALGAENETEKLLLETLHA-------DSLPCLHHALRRLLK---------ELGKSA---LSVASRI 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 203 FTAPGLHLKQPFV-QGLALY--TPVVLPRSldfTELDVAAekIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQG-- 277
Cdd:cd02053    93 YLKKGFEIKKDFLeESEKLYgsKPVTLTGN---SEEDLAE--INKWVEEATNGKITEFLSSLPPNVVLLLLNAVHFKGfw 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 278 KMKGFSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHW-SDIQDNFSVTQVPFTESACLLLIQP-HYASDLDKVegltfqQN 355
Cdd:cd02053   168 KTKFDPSLTSKDLFYLDDEFSVPVDMMKAPKYPLSWfTDEELDAQVARFPFKGNMSFVVVMPtSGEWNVSQV------LA 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 356 SLNWMKKLSP----RTIHLTMPQLVLQGSYDLQDLLAQAELpAILHTELNLQKLSNDRIRVGEVLNSIFFELEADEREPT 431
Cdd:cd02053   242 NLNISDLYSRfpkeRPTQVKLPKLKLDYSLELNEALTQLGL-GELFSGPDLSGISDGPLFVSSVQHQSTLELNEEGVEAA 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1859470595 432 ESTQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd02053   321 AATSVAMSRSLSSFSVNRPFFFAIMDDTTGVPLFLGSVTNP 361
serpinA9_centerin cd19556
serpin family A member 9, centerin; Centerin, also known as germinal center B-cell-expressed ...
125-472 9.07e-14

serpin family A member 9, centerin; Centerin, also known as germinal center B-cell-expressed transcript 1/GCET1, is a serpin whose expression is restricted to germinal center B-cells and lymphoid malignancies with germinal center B-cell maturation. Expression of centerin, together with bcl-6 and GCET2, constitutes a germinal center B-cell signature, which is associated with a good prognosis in diffuse large B-cell lymphomas. Centerin is thought to function in vivo in the germinal centre as an efficient inhibitor of a trypsin-like protease. It also inhibits the trypsin-like serine proteases trypsin, thrombin and plasmin and is able to bind heparin and DNA. The centerin gene maps to the A clade serpin cluster on chromosome 14q32.1, which also contains a1-antitrypsin and a1-antichymotrypsin together with seven other serpins. The clade A of the serpin superfamily includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381024 [Multi-domain]  Cd Length: 388  Bit Score: 72.76  E-value: 9.07e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 125 LSPTAVFGTLASLYLGAldHTADRLQAILGV----PWKDKNCTSRLDAHKVLSALQAVQGLLVAQGRAdsqaqlllstvv 200
Cdd:cd19556    41 FSPVSVSTSLAMLSLGA--HSVTKTQILQGLgfnlTHTPESAIHQGFQHLVHSLTVPSKDLTLKMGSA------------ 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 201 gVFTAPGLHLKQPFVQGLA-LYTPVVLprSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGK- 278
Cdd:cd19556   107 -LFVKKELQLQANFLGNVKrLYEAEVF--STDFSNPSIAQARINSHVKKKTQGKVVDIIQGLDLLTAMVLVNHIFFKAKw 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 279 MKGFSLLAEPQEF--WVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHyASDLDKVEGLTFQQNS 356
Cdd:cd19556   184 EKPFHPEYTRKNFpfLVGEQVTVHVPMMHQKEQFAFGVDTELNCFVLQMDYKGDAVAFFVLPS-KGKMRQLEQALSARTL 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 357 LNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSN-DRIRVGEVLNSIFFELEADEREPTEST- 434
Cdd:cd19556   263 RKWSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNAFDKNADFSGIAKrDSLQVSKATHKAVLDVSEEGTEATAATt 342
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1859470595 435 -----QQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19556   343 tkfivRSKDGPSYFTVSFNRTFLMMITNKATDGILFLGKVENP 385
serpin42Dd-like_insects cd19954
insect serpins similar to Drosophila melanogaster Serpin 42Dd; Serpins in insects function ...
123-472 1.18e-13

insect serpins similar to Drosophila melanogaster Serpin 42Dd; Serpins in insects function within development, wound healing and immunity. Drosophila melanogaster Serpin 42Dd, also called serpin 1 (Spn1), regulates Toll-mediated immune responses, functioning as a repressor of Toll activation upon fungal infection. Insect serpins from house flies, fruit flies, and stable flies are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381070 [Multi-domain]  Cd Length: 366  Bit Score: 72.24  E-value: 1.18e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 123 TVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKnctsrldaHKVLSALQAVqgLLVAQGRADSQAQLLLStvvgV 202
Cdd:cd19954    23 VVVSPLSIESALALLYMGAEGKTAEELRKVLQLPGDDK--------EEVAKKYKEL--LQKLEQREGATLKLANR----L 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 203 FTAPGLHLKQPFVQgLALYTPVVLPRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLAF---NTyVHFQGK- 278
Cdd:cd19954    89 YVNERLKILPEYQK-LAREYFNAEAEAVNFADPAKAADIINKWVAQQTNGKIKDLVTPSDLDPDTKAllvNA-IYFKGKw 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 279 MKGFSLLA-EPQEFWVDNSTSVSVPMLSGMGTFQHwSDIQD-NFSVTQVPFTESA-CLLLIQPHYASDLDKVEgltfQQ- 354
Cdd:cd19954   167 QKPFDPKDtKKRDFYVSPGRSVPVDMMYQDDNFRY-GELPElDATAIELPYANSNlSMLIILPNEVDGLAKLE----QKl 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 355 ---NSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKL-SNDRIRVGEVLNSIFFEL-----EA 425
Cdd:cd19954   242 kelDLNELTERLQMEEVTLKLPKFKIEFDLDLKEPLKKLGINEIFTDSADFSGLlAKSGLKISKVLHKAFIEVneagtEA 321
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1859470595 426 DEREPTESTQQLNKPEVLEVTLNRPFLFAVYDQSATalHFLGRVANP 472
Cdd:cd19954   322 AAATVSKIVPLSLPKDVKEFTADHPFVFAIRDEEAI--YFAGHVVNP 366
serpinE1_PAI-1 cd02051
serpin family E member 1, plasminogen activator inhibitor-1; Plasminogen activator inhibitor-1 ...
124-472 2.11e-13

serpin family E member 1, plasminogen activator inhibitor-1; Plasminogen activator inhibitor-1 (PAI-1/PLANH1, also called endothelial PAI) is the primary, fast-acting inhibitor of plasminogen activators. It is often bound to vitronectin, an abundant component of the extracellular matrix in many tissues. PAI1 deficiency is a rare bleeding disorder that causes excessive or prolonged bleeding due to blood clots being broken down too early. PAI-1 is a member of the serpin superfamily and belongs to clade E. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381007 [Multi-domain]  Cd Length: 374  Bit Score: 71.31  E-value: 2.11e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNctsrldahkVLSALQAVQGLLVAQGRADsqaqlLLSTVVGVF 203
Cdd:cd02051    28 AFSPYGVASVLAMLQLGAGGETLQQIQAAMGFKLQEKG---------MAPALRHLQKDLMGPWNKD-----GVSTADAVF 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFVQGLAlYTPVVLPRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVD--STLAFNTYVHFQGKMKg 281
Cdd:cd02051    94 VQRDLKLVKGFMPHFF-RAFRSTVKQVDFSEPERARFIINDWVKDHTKGMISDFLGSGALDqlTRLVLLNALHFNGLWK- 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 282 fslLAEPQE------FWVDNSTSVSVPMLSGMGTFQHW---SDIQDNFSVTQVPFT-ESACLLLIQPhyasdLDKVEGLT 351
Cdd:cd02051   172 ---TPFPEKstherlFHKSDGSTVSVPMMAQTNKFNYGeftTPDGVDYDVIELPYEgETLSMLIAAP-----FEKEVPLS 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 352 FQQNSLN------WMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTE-LNLQKLSND-RIRVGEVLNSIffEL 423
Cdd:cd02051   244 ALTNILSaqlisqWKQNMRRVTRLLVLPKFSLESEVDLKKPLENLGMTDMFRQFkADFTRLSDQePLCVSKALQKV--KI 321
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1859470595 424 EADEREPTESTQQ----LNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd02051   322 EVNESGTKASSATaaivYARMAPEEIILDRPFLFVVRHNPTGAVLFMGQVMEP 374
serpin_thermopin-like cd19590
serpin thermopin and similar proteins; Thermopin, the serpin from Thermobifida fusca, ...
123-471 4.90e-13

serpin thermopin and similar proteins; Thermopin, the serpin from Thermobifida fusca, functions as an irreversible proteinase inhibitor with resistance to polymerization at high temperatures. The crystal structure of the cleaved thermopin was found to adopt the canonical serpin fold, supporting its inclusion as a classical inhibitory member of the serpin superfamily. A detailed structural comparison revealed unique features, including charge-stabilizing interactions, a deleted element of secondary structure (the G helix), and a C-terminal "tail" that interacts with the top of the A beta sheet and plays an important role in the folding/unfolding of the molecule. These unique features provide structural and biophysical evidence as to how this unusual serpin member has adapted to remain functional in an extreme environment. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381056 [Multi-domain]  Cd Length: 366  Bit Score: 70.23  E-value: 4.90e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 123 TVLSPTAVFGTLASLYLGALDHTADRLQAILGVPwkdkncTSRLDAHKVLSALQAvqgllvAQGRADSQAQLLLSTVVGV 202
Cdd:cd19590    21 LFFSPYSISSALAMTYAGARGETAAEMAAVLHFP------LPQDDLHAAFNALDL------ALNSRDGPDPPELAVANAL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 203 FTAPGLHLKQPFVQGLALY--TPVvlpRSLDF-TELDVAAEKIDRFMQAVTGWK------TGcslmgaSVDS----TLAf 269
Cdd:cd19590    89 WGQKGYPFLPEFLDTLAEYygAGV---RTVDFaGDPEGARKTINAWVAEQTNGKikdllpPG------SIDPdtrlVLT- 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 270 NTyVHFQGK-MKGFS-LLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDiqDNFSVTQVPFTESAC-LLLIQPHyASDLDK 346
Cdd:cd19590   159 NA-IYFKAAwATPFDpEATKDAPFTLLDGSTVTVPMMHQTGRFRYAEG--DGWQAVELPYAGGELsMLVLLPD-EGDGLA 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 347 VE-GLTFQQnsLN-WMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIFfeL 423
Cdd:cd19590   235 LEaSLDAEK--LAeWLAALREREVDLSLPKFKFESSFDLKETLKALGMPDAFTPAADFSGGTGSKdLFISDVVHKAF--I 310
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1859470595 424 EADErEPTE---------STQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVAN 471
Cdd:cd19590   311 EVDE-EGTEaaaatavvmGLTSAPPPPPVEFRADRPFLFLIRDRETGAILFLGRVVD 366
serpinN_SPI-1_SPI-2 cd19583
serpin family N, viral serpin-1 and serpin-2; This group of viral serpins are from the ...
229-468 2.50e-11

serpin family N, viral serpin-1 and serpin-2; This group of viral serpins are from the Orthopoxvirus branch (cowpox, ectromelia, vaccinia, variola, and rabbitpox) and corresponding to clade N which contains viral serpin-1 (SPI-1-like) and viral serpin-2 (SPI-2-like) serpins. The other is clade O which contains the viral serpin-3 (SPI-3-like) serpins. SPI-2, also called cytokine response modifier A (crmA), acts to inhibit inflammation and apoptosis. SPI-1, a serpin that is approximately 45% identical to SPI-2, has also been implicated in the inhibition of apoptosis, since certain cells infected with RPV SPI-1 mutants undergo apoptotic cell death. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381049 [Multi-domain]  Cd Length: 347  Bit Score: 64.89  E-value: 2.50e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 229 SLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGA-SVDSTLAFNTYVHFQGKMK-GFSL-LAEPQEFWVDNSTSVSVPMLS 305
Cdd:cd19583    97 TVDFNNANQTKDLINEWVKTMTNGKINPLLTSPlSINTRMIVISAVYFKAMWLyPFSKhLTYTDKFYISKTIVVSVDMMV 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 306 GMGTFQHWSDIQD---NFSVTQVPFTESACLLLIQPhyasdlDKVEGLTFQQNSLN------WMKKLSPRTIHLTMPQL- 375
Cdd:cd19583   177 GTENDFQYVHINElfgGFSIIDIPYEGNTSMVVILP------DDIDGLYNIEKNLTdenfkkWCNMLSTKSIDLYMPKFk 250
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 376 VLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIRVGEVLNSIFFELEADEREPTESTQQL---NKPEVLEVTLNRPFL 452
Cdd:cd19583   251 VETESYNLVPILEKLGLTDIFGYYADFSNMCNETITVEKFLHKTYIDVNEEYTEAAAATGVLmtdCMVYRTKVYINHPFI 330
                         250
                  ....*....|....*.
gi 1859470595 453 FAVYDQSATALhFLGR 468
Cdd:cd19583   331 YMIKDNTGKIL-FIGR 345
serpin1K-like cd19579
Manduca sexta Serpin 1K and similar proteins; Serpin 1K is a chymotrypsin inhibitor and is 1 ...
124-455 8.56e-11

Manduca sexta Serpin 1K and similar proteins; Serpin 1K is a chymotrypsin inhibitor and is 1 of 12 serpins found in the hemolymph of the hornworm moth Manduca sexta. Serpins may be involved in the immune response in insect hemolymph. All of these serpins are encoded by the same gene, and the message for each is produced by alternative splicing of the final exon. This exon encodes the RCL and two strands of sheet B. Serpin 1K has a canonical structure at the reactive center, as is observed in a1-antitrypsin, whereas hinge residues (P17-P13) adopt the position and conformation observed in ovalbumin. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381045 [Multi-domain]  Cd Length: 368  Bit Score: 63.42  E-value: 8.56e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDkncTSRLDAHKVLSALQAVQG--LLVAQgR--ADSQAQL---LL 196
Cdd:cd19579    28 VCSPFSVLIPLAQLALGAEGETHDELLKALGLPNDD---EIRSVFPLLSSNLRSLKGvtLDLAN-KiyVSDGYELsddFK 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 197 STVVGVFTAPGlhlkqpfvqglalytpvvlpRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTLA---FNTyV 273
Cdd:cd19579   104 KDSKDVFDSEV--------------------ENIDFSKPQEAAKIINDWVEEQTNGRIKNLVSPDMLSEDTRlvlVNA-I 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 274 HFQGKMKG-F-SLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFT-ESACLLLIQPHyasdldKVEGL 350
Cdd:cd19579   163 YFKGNWKTpFnPNDTKDKDFHVSKDKTVKVPMMYQKGSFKYAESPELDAKLLELPYKgDNASMVIVLPN------EVDGL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 351 TFQQ------NSLNW-MKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAIL---HTELNLQKLSNDRIRVGEVLNSIF 420
Cdd:cd19579   237 PALLeklkdpKLLNSaLDKLSPTEVEVYLPKFKIESEIDLKDILKKLGVTKIFdpdASGLSGILVKNESLYVSAAIQKAF 316
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1859470595 421 feLEADErEPTE----------STQQLNKPEVLEVtlNRPFLFAV 455
Cdd:cd19579   317 --IEVNE-EGTEaaaanafivvLTSLPVPPIEFNA--DRPFLYYI 356
serpinC1_AT3 cd02045
serpin family C member 1, antithrombin III; Antithrombin III (AT3/ATIII) is a non-vitamin ...
291-472 9.17e-11

serpin family C member 1, antithrombin III; Antithrombin III (AT3/ATIII) is a non-vitamin K-dependent serine protease that inhibits coagulation by neutralizing the enzymatic activity of thrombin (factors IIa, IXa, Xa). It is the most important anticoagulant molecule in mammalian circulation systems, controlled by its interaction with the cofactor, heparin, which accelerates its interaction with target proteases. This subgroup corresponds to clade C of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381002 [Multi-domain]  Cd Length: 395  Bit Score: 63.65  E-value: 9.17e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 291 FWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPF-TESACLLLIQPHYASDLDKVEGLTFQQNSLNWMKKLSPRTIH 369
Cdd:cd02045   202 FYKADGESCSVPMMYQEGKFRYRRVAEDGVQVLELPYkGDDITMVLILPKPEKSLAKVEKELTPEKLQEWLDELEETMLV 281
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 370 LTMPQLVLQGSYDLQDLL-----------AQAELPAILHTElnlqklsNDRIRVGEVLNSIFFELEADEREPTEST---- 434
Cdd:cd02045   282 VHMPRFRIEDSFSLKEQLqdmglvdlfspEKAKLPGIVAGG-------RDDLYVSDAFHKAFLEVNEEGSEAAASTavvi 354
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1859470595 435 --QQLNkPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd02045   355 agRSLN-PNRVTFKANRPFLVFIREVPINTIIFMGRVANP 393
serpinE2_GDN cd19573
serpin family E member 2, glia derived nexin (GDN); Serpin glia-derived nexin (GDN; also ...
120-470 3.20e-10

serpin family E member 2, glia derived nexin (GDN); Serpin glia-derived nexin (GDN; also called peptidase inhibitor 7/PI-7 or protease nexin 1/PN-1) is a specific and extremely efficient inhibitor of thrombin. Unlike other thrombin inhibitors, it is not synthesized in the liver and does not circulate in the blood. It is instead expressed by multiple cell types and is located on the surface of these cells, bound to glycosaminoglycans. GDN plays a role in thrombosis and atherosclerosis and is a clade E serpin. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381039 [Multi-domain]  Cd Length: 375  Bit Score: 61.69  E-value: 3.20e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 120 HGATVLSPTAVFGTLASLYLGALDHTADRLQAILgvpwkdknctsRLDAHKVLSALQAVQGLLVAQGRADsqaqlLLSTV 199
Cdd:cd19573    28 HENVVISPHGIASVLGMLQLGADGRTKKQLTTVM-----------RYNVNGVGKSLKKINKAIVSKKNKD-----IVTIA 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 200 VGVFTAPGLHLKQPFV-QGLALYTPVVlpRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVDSTL----AFNTyVH 274
Cdd:cd19573    92 NAVFAKSGFKMEVPFVtRNKDVFQCEV--RSVDFEDPESAADSINQWVKNQTRGMIDNLVSPDLIDGALtrlvLVNA-VY 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 275 FQG--KMKGFSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDN---FSVTQVPFT-ESACLLLIQP-HYASDLDKV 347
Cdd:cd19573   169 FKGlwKSRFQPENTKKRTFYAADGKSYQVPMLAQLSVFRCGSTSTPNglwYNVIELPYHgESISMLIALPtESSTPLSAI 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 348 EGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILH-TELNLQKLS-NDRIRVGEVLNSIFFELEA 425
Cdd:cd19573   249 IPHISTKTIQSWMNTMVPKRVQLILPKFTAEAETDLKEPLKALGITDMFDsSKANFAKITrSESLHVSHVLQKAKIEVNE 328
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1859470595 426 DEREPTESTQQ--LNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVA 470
Cdd:cd19573   329 DGTKASAATTAilIARSSPPWFIVDRPFLFFIRHNPTGAILFMGQIN 375
serpin_miropin-like cd19588
serpin miropin and similar proteins; Miropin, the serpin from Tannerella forsythia, is thought ...
123-468 4.35e-10

serpin miropin and similar proteins; Miropin, the serpin from Tannerella forsythia, is thought to contribute to the virulence of periodontal pathogens by inhibiting neutrophil serine proteases. Miropin broadly inhibits serine endopeptidases (SEPs) including trypsin, neutrophil elastase, pancreatic elastase, subtilisin, and cathepsin G and cysteine endopeptidases (CEPs) including papain, calpain-like peptidase Tpr, and gingipain K through various reactive-site bonds. This is achieved by offering several target bonds of the RCL for cleavage within a bait region, instead of a single RSB as found in canonical serpins. In addition, promiscuous inhibition is facilitated by the capacity to insert strands deviating from the canonical length into the central sheet A, while keeping the prey peptidase bound and inactivated. The structural adaptation of miropin to provide a relaxed inhibitory specificity, which allows for formation of inhibitory complexes using different sites, is unique among serpins. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381054 [Multi-domain]  Cd Length: 365  Bit Score: 61.35  E-value: 4.35e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 123 TVLSPTAVFGTLASLYLGALDHTADRLQAILGVpwkdknctSRLDAHKVLSALQAVQGLLVaqgRADSQAQLLL--Stvv 200
Cdd:cd19588    28 VFISPLSISMALGMTYNGAAGETKEEMAKVLGL--------EGLSLEEINEAYKSLLELLP---SLDPKVELSIanS--- 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 201 gVFTAPGLHLKQPFVQGL-ALYTPVVlpRSLDFTELDvAAEKIDRfmqavtgW---KT-GC--SLMGASVDSTLAF--NT 271
Cdd:cd19588    94 -IWYRKGFPVKPDFLDTNkDYYDAEV--EELDFSDPA-AVDTINN-------WvseKTnGKipKILDEIIPDTVMYliNA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 272 yVHFQGK-MKGFSLLA-EPQEFWVDNSTSVSVPMLSGMGTFQHWSDiqDNFSVTQVPFTESA-CLLLIQPHYASDLDKV- 347
Cdd:cd19588   163 -IYFKGDwTYPFDKENtKEEPFTLADGSTKQVPMMHQTGTFPYLEN--EDFQAVRLPYGNGRfSMTVFLPKEGKSLDDLl 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 348 EGLTFQQNSlNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELP-AILHTELNLQKLSNDRIRVGEVLNSIFfeLEAD 426
Cdd:cd19588   240 EQLDAENWN-EWLESFEEQEVTLKLPRFKLEYETELNDALKALGMGiAFDPGAADFSIISDGPLYISEVKHKTF--IEVN 316
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1859470595 427 ErEPTE------------STQqlnkPEVLEVTLNRPFLFAVYDQSATALHFLGR 468
Cdd:cd19588   317 E-EGTEaaavtsvgmgttSAP----PEPFEFIVDRPFFFAIRENSTGTILFMGK 365
serpin_crustaceans_chelicerates_insects cd19594
serpin family proteins from crustaceans, chelicerates, and insects; This group includes a ...
126-472 4.87e-10

serpin family proteins from crustaceans, chelicerates, and insects; This group includes a variety of serpins from crustaceans (sea louse, Chinese mitten crab, signal crayfish, red king crab, Asian tiger shrimp), chelicerates (Atlantic horseshoe crab, common house spider), and insects (Asian tiger mosquito, caddisfly, pea aphid, bed bug, fruit fly, Australian sheep blowfly, tobacco hornworm, alfalfa leafcutting bee). SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381059 [Multi-domain]  Cd Length: 374  Bit Score: 61.04  E-value: 4.87e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 126 SPTAVFGTLASLYLGALDHTADRLQAILGVPWK-DKNCTsrLDAHKVLSALQavqgllvaQGRADSQAQLLLSTVVGVFT 204
Cdd:cd19594    28 SPYSIWSALLLAYFGARGETEKELKKALGLPWAlSKADV--LRAYRLEKFLR--------KTRQNNSSSYEFSSANRLYF 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 205 APGLHLKQPFVQglALYTPVvlpRSLDFT-ELDVAAEKIDRFMQAVTGWKTGCSLMGASVDST----LAfNTyVHFQGKM 279
Cdd:cd19594    98 SKTLKLRECMLD--LFKDEL---EKVDFRsDPEEARKEINDWVSNQTKGHIKDLLPPGSITEDtklvLA-NA-AYFKGLW 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 280 KGF--SLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPF-TESACLLLIQPHYASD-LDK-VEGLTfqQ 354
Cdd:cd19594   171 LSQfdPENTKKEPFYTSPSEQTFVDMMKQKGTFNYGVSEELGAHVLELPYkGDDISMFILLPPFSGNgLDNlLSRLN--P 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 355 NSL-NWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSND--RIRVGEVLNSIFFELeaDErEPT 431
Cdd:cd19594   249 NTLqNALEEMYPREVEVSLPKFKLEQELELVPALQKMGVGDLFDPSAADLSLFSDepGLHLDDAIHKAKIEV--DE-EGT 325
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1859470595 432 E--------STQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19594   326 EaaaatalfSFRSSRPLEPTKFICNHPFVFLIYDKKTNTILFMGVYRDP 374
serpin_mollusks cd19602
serpin family proteins from mollusks; This group includes a variety of serpins from mollusks ...
111-471 1.02e-09

serpin family proteins from mollusks; This group includes a variety of serpins from mollusks (freshwater snail, sea slug, and disk abalone). SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381066 [Multi-domain]  Cd Length: 374  Bit Score: 60.04  E-value: 1.02e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 111 MHSELwGVVHGATVLSPTAVFGTLASLYLGALDHTADRLQAILGVpwKDKNCTSRLDAHKVLSALQAVQgllvaqgraDS 190
Cdd:cd19602    17 LYQKL-SQSESNIVYSPFSIHSALTMTSLGARGDTAREMKRTLGL--SSLGDSVHRAYKELIQSLTYVG---------DV 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 191 QaqllLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLpRSLDFTELDVAAEKIDRFMQAVTGWKTGCSLMGASVD-ST--L 267
Cdd:cd19602    85 Q----LSVANGIFVKPGFTIVPKFIDDLTSFYQAVT-DNIDLSAPGGPETPINDWVANETRNKIQDLLAPGTINdSTalI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 268 AFNTyVHFQGKMKG-FSL-LAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFT-ESACLLLIQPHYASDL 344
Cdd:cd19602   160 LVNA-IYFNGSWKTpFDRfETKKQDFTQSNSAVKTVDMMHDTGRYRYKRDPALGADVVELPFKgDRFSMYIALPHAVSSL 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 345 DKVEGLTFQQ---NSLNwmKKLSPRTIHLTMPQLVLQGSYDLQDLL-----------AQAELPAILHTelnlQKLSndri 410
Cdd:cd19602   239 ADLENLLASPdkaETLL--TGLETRRVKLKLPKFKIETSLSLKKALqelgmgkafdpAAADFTGITST----GQLY---- 308
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1859470595 411 rVGEVLNSIFFELEADEREPTEST------QQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVAN 471
Cdd:cd19602   309 -ISDVIHKAVIEVNETGTTAAAATaviisgKSSFLPPPVEFIVDRPFLFFLRDKVTGAILFQGKFSG 374
serpinH2 cd19575
serpin family H member 2; The function of Danio rerio serpin H2 is not known. In general, ...
123-467 3.72e-09

serpin family H member 2; The function of Danio rerio serpin H2 is not known. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381041 [Multi-domain]  Cd Length: 382  Bit Score: 58.41  E-value: 3.72e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 123 TVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLDahkvlSALQAVQGllvAQGRAdsqaqLLLSTVVGV 202
Cdd:cd19575    32 TVFSPLLLASSLLALGGGAKGTTASQFQDLLRISSNENVVGETLT-----TALKSVHE---ANGTS-----FILHSSSAL 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 203 FTAPGLHLKQPFVQGLALYTPVvlprslDFTELDVAAEKIDrfMQAVTGW-KTGC-SLMGASVDSTLAFNT-------YV 273
Cdd:cd19575    99 FSKQAPELEKSFLKKLQTRFRV------QHVALGDADKQAD--MEKLHYWaKSGMgGEETAALKTELEVKAgalilanAL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 274 HFQGKM-KGFSLLAEPQEFWVdNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTES-ACLLLIQPHYASDLDKVEGLT 351
Cdd:cd19575   171 HFKGLWdRGFYHENQDVRSFL-GTKYTKVPMMHRSGVYRHYEDMENMVQVLELGLWEGkASIVLLLPFHVESLARLDKLL 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 352 FQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTEL----NLQKLSNDRIRVGEVLNSIFFEL--EA 425
Cdd:cd19575   250 TLELLEKWLGKLNSTSMAISLPRTKLSSALSLQKQLSALGLTDAWDETSadfsTLSSLGQGKLHLGAVLHWASLELapES 329
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1859470595 426 DEREPTESTQQLNKPEVLEVtlNRPFLFAVYDQSATALHFLG 467
Cdd:cd19575   330 GSKDDVLEDEDIKKPKLFYA--DHSFIILVRDNTTGALLLMG 369
serpinA14_UTMP_UABP-2 cd19559
serpin family A member 14, uterine milk protein and uteroferrin-associated basic protein 2; ...
124-473 5.37e-09

serpin family A member 14, uterine milk protein and uteroferrin-associated basic protein 2; The uteroferrin(Uf)-associated basic proteins-2(UABP-2/UABP/UfAP) are a group of three (Mr = 42K, 48K, and 50K) antigenically related, basic glycoproteins secreted by the porcine uterus under the influence of progesterone (P4), which exist as heterodimers (Mr = 80,000) with the iron-binding acid phosphatase, Uf. This group also contains UTMP (uterine milk protein), encoded by SERPINA14. UTMP binds noncovalently to the iron-containing glycoprotein uteroferrin, which displays phosphatase activity and is thought to be involved with iron transport to the fetus. Synthesis of these serpins is induced by progesterone in the uterus. UTMP is also an activin-binding protein and has been implicated in regulation of uterine immune function. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381027 [Multi-domain]  Cd Length: 386  Bit Score: 57.84  E-value: 5.37e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDkncTSRLDAHKVLSALQAVQGLLVAQGRADSQAQLllstvvgvF 203
Cdd:cd19559    40 IFSPMSISTSLATLSLGTRSTTLTNLLEVLGFDLKN---IRVWDVHQSFQHLVQLLHELVRQKQLKHQDIL--------F 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFVQGLALYTPVVLpRSLDFTELDVAAEKIDRFMqAVTGWKTGCSLMGASVDSTLAF-NTYVHFQG--KMK 280
Cdd:cd19559   109 IDSNRKINQMFLHEIEKLYKVDI-QMIDFRDKEKAKKQINHFV-AEKMHKKIKELITDLDPHTFLClVNYIFFKGiwERA 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 281 GFSLLAEPQEFWVDNSTSVSVPMLSGmgTFQHWSDIQDNFSVTQV--PFTESACLLLIQP---HYASDLDKvegLTFQQN 355
Cdd:cd19559   187 FQTNLTQKEDFFVNEKTKVQVDMMRK--TERMIYSRSEELFATMVkmPCKGNVSLVLVLPdagQFDSALKE---MAAKRA 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 356 SLnwMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRI-RVGEVLNSIFFELEAD--EREPTE 432
Cdd:cd19559   262 RL--QKSSDFRLVHLILPKFKISSKIDLKHLLPKIGIEDIFTTKANFSGITEEAFpAILEAVHEARIEVSEKglTKDAAK 339
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1859470595 433 STQQLNKP------EVLEVTLNRPFLFAVYDQSATALHFLGRVANPL 473
Cdd:cd19559   340 HMDNKLAPpakqkaVPVVVKFNRPFLLFVEDEKTQRDLFVGKVFNPK 386
serpinB13_headpin cd19572
serpin family B member 13, headpin; Headpin (also known as hurpin or proteinase inhibitor 13 ...
289-472 2.33e-08

serpin family B member 13, headpin; Headpin (also known as hurpin or proteinase inhibitor 13/P113) maps to chromosome 18q21.3 and is expressed in normal squamous epithelium of the oral mucosa, skin, and cervix. Inhibitory serpins are known to play an important role in tumor invasion, metastasis, tumor suppression and apoptosis. Headpin belongs to the ovalbumin family of serpins (ov-serpins), a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381038 [Multi-domain]  Cd Length: 391  Bit Score: 55.89  E-value: 2.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 289 QEFWVDNSTSVSVPMLSGMGTFQHWS--DIQDNfsVTQVPFTES-ACLLLIQPhyaSDLDKVEGLTFQQNSLNWMKKLSP 365
Cdd:cd19572   199 EEFWLNKSTSKSVLMMTQCHSFSFTFleDLQAK--ILGIPYKNNdLSMFVLLP---NDIDGLEKIIDKISPEKLVEWTSP 273
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 366 -----RTIHLTMPQLVLQGSYDLQDLLAQAELPAILhTELNLQKL---SNDRIRVGEVLNSIFFELEADEREPTEST--- 434
Cdd:cd19572   274 ghmeeRNVSLHLPRFEVEDSYDLEDVLAALGLGDAF-SECQADYSgmsARSGLHAQKFLHRSFVVVTEEGTEAAAATgvg 352
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1859470595 435 -QQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19572   353 fTVSSAPGCENVHCNHPFLFFIRHNESDSVLFFGRFSSP 391
serpin11-like_insects cd19600
insect serpins similar to Bombyx mori Serpin-11; Serpins in insects function within ...
121-472 2.71e-08

insect serpins similar to Bombyx mori Serpin-11; Serpins in insects function within development, wound healing and immunity. The specific function of Bombyx mori serpin-11 (SPN19) is unknown. Insect serpins from sawfly, mealworm, riceborer, moth, silkworm, bollworm are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381064 [Multi-domain]  Cd Length: 366  Bit Score: 55.74  E-value: 2.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 121 GATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPwkDKNCTSRLDAHKVLSALQAVqgllvaqgraDSQAQLLLSTvv 200
Cdd:cd19600    21 GNVMVSPASIKSALAMLLEGARGRTAEEIRSALRLP--PDKSDIREQLSRYLASLKVN----------TSGTELENAN-- 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 201 GVFTAPGLHLKQPFVQGLALY--TPVvlpRSLDFTELDVAAEKIDRFM-QAVTGWKTGCSLMG-ASVDSTLAFNTYVHFQ 276
Cdd:cd19600    87 RLFVSKKLAVKKEYEDALRRYygTEI---QKVDFGNPVNAANTINDWVrQATHGLIPSIVEPGsISPDTQLLLTNALYFK 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 277 GK-MKGFSLLAEPQE-FWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTES-ACLLLIQPH---YASDLdkVEGL 350
Cdd:cd19600   164 GRwLKSFDPKATRLRcFYVPGRGCQNVSMMELVSKYRYAYVDSLRAHAVELPYSDGrYSMLILLPNdreGLQTL--SRDL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 351 TFQQNSlNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQK-LSNDRIRVGEVLNSIFFELEADERE 429
Cdd:cd19600   242 PYVSLS-QILDLLEETEVLLSIPKFSIEYKLDLVPALKSLGIQDLFSSNANLTGiFSGESARVNSILHKVKIEVDEEGTV 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1859470595 430 PTESTQQLNKP---EVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19600   321 AAAVTEAMVVPligSSVQLRVDRPFVFFIRDNETGSVLFEGRIEEP 366
serpinK_insect_SRPN2-like cd19578
serpin family K, insect Serpin-2 and similar proteins; Serpin-2 (SRPN2) is a negative ...
124-472 4.36e-08

serpin family K, insect Serpin-2 and similar proteins; Serpin-2 (SRPN2) is a negative regulator of the melanization response in the malaria vector Anopheles gambiae. SRPN2 irreversibly inhibits clip domain serine proteinase 9 (CLIPB9), which functions in a serine proteinase cascade ending in the activation of prophenoloxidase and melanization. Silencing of SRPN2 results in spontaneous melanization and decreased life span of the mosquito and is a promising target for vector control. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381044 [Multi-domain]  Cd Length: 376  Bit Score: 54.90  E-value: 4.36e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVPwkDKNCTSRLDAHKVLSALQAVqgllvaqgraDSQAQLLLST--VVG 201
Cdd:cd19578    30 LISPISLKLLLALLYEGAGGQTAKELSNVLGFP--DKKDETRDKYSKILDSLQKE----------NPEYTLNIGTriFVD 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 202 VFTAPglhlKQPFVQGL-ALY-TPVVlprSLDFTELDVAAEKIDRFMQAVTgwktgcslMG--------ASVDST--LAF 269
Cdd:cd19578    98 KSITP----RQRYAAIAkTFYnTDIE---NVNFSDPTAAAATINSWVSEIT--------NGrikdlvteDDVEDSvmLLA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 270 NTyVHFQGKMKG--FSLLAEPQEFWVDNSTSVSVPMLSGMGTFqHWSDIQD-NFSVTQVPFT-ESACLLLIQPHYASDLD 345
Cdd:cd19578   163 NA-IYFKGLWRHqfPENETKTGPFYVTPGTTVTVPFMEQTGQF-YYAESPElDAKILRLPYKgNKFSMYIILPNAKNGLD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 346 KV-EGLTFQQ-NSLNWMkkLSPRTIHLTMPQLVLQGSYDLQDLL----------AQAELPAILHTELNLQKL--SNDRIR 411
Cdd:cd19578   241 QLlKRINPDLlHRALWL--MEETEVDVTLPKFKFDFTTSLKEVLqelgirdifsDTASLPGIARGKGLSGRLkvSNILQK 318
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1859470595 412 VGevlnsiffeLEADEREPTEST----QQLNK--PEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19578   319 AG---------IEVNEKGTTAYAateiQLVNKfgGDVEEFNANHPFLFFIEDETTGTILFAGKVENP 376
serpinB_MENT-like cd02058
serpin family B, Myeloid and Erythroid Nuclear Termination stage-specific protein (MENT) and ...
126-472 1.15e-07

serpin family B, Myeloid and Erythroid Nuclear Termination stage-specific protein (MENT) and similar proteins; Gallus gallus Myeloid and Erythroid Nuclear Termination stage-specific protein (MENT) is a nonhistone heterochromatin-associated serpin that is an effective inhibitor of cathepsin L as well as the papain-like cysteine proteases cathepsins K, L, and V in vitro. It's reactive center loop, which is essential for chromatin bridging, is able to mediate formation of a loop-sheet oligomer. It also contains an M-loop which contains two critical functional motifs: a classical nuclear localization signal (NLS) that is required for nuclear import and an AT-hook motif that is involved in chromatin and DNA binding. MENT belongs to the clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381014 [Multi-domain]  Cd Length: 406  Bit Score: 53.84  E-value: 1.15e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 126 SPTAVFGTLASLYLGALDHTADRLQAIL------------------GVPWKDKNCTSRLDAHKVLSALQAvqgLLVAQGR 187
Cdd:cd02058    30 SPWSIASALAMVYLGAKGSTARQMAEVLhftqavraesssvarpsrGRPKRRRMDPEHEQAENIHSGFKE---LLSAFNK 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 188 adSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVlPRSLDF-TELDVAAEKIDRFMQAVTGWKTGCSLMGASVDST 266
Cdd:cd02058   107 --PRNNYSLKSANRLYVEKTYALLPTYLQLIKKYYKAE-PQAVNFkTAPEQSRKEINTWVEKQTESKIKNLLPSDSVDST 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 267 --LAFNTYVHFQG--KMKGFSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQphYAS 342
Cdd:cd02058   184 trLVLVNAIYFKGnwEVKFQAEKTSIQPFRLSKTKTKPVKMMFMRDTFPMFIMEKMNFKMIELPYVKRELSMFIL--LPD 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 343 DL-DKVEGLTFQQNSLNWmKKLSPRT---------IHLTMPQLVLQGSYDLQDLLAQAELPAILHTEL-NLQKLSNDR-I 410
Cdd:cd02058   262 DIkDNTTGLEQLERELTY-ERLSEWAdskmmmeteVELHLPKFSLEENYDLRSTLSNMGMTTAFTPNKaDFRGISDKKdL 340
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1859470595 411 RVGEVLNSIFFELEADEREPTESTQQL----NKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd02058   341 AISKVIHKSFVAVNEEGTEAAAATAVIisfrTSVIVLKFKADHPFLFFIRHNKTKTILFFGRFCSP 406
serpinB8_CAP-2 cd19567
serpin family B member 8, cytoplasmic antiproteinase 2; Cytoplasmic antiproteinase 2 (CAP-2 or ...
125-472 1.32e-07

serpin family B member 8, cytoplasmic antiproteinase 2; Cytoplasmic antiproteinase 2 (CAP-2 or peptidase inhibitor 8/PI-8) is a member of the ovalbumin family of serpins (ov-serpins). Serpin B8 is produced by platelets and can bind to and inhibit the function of furin, a serine protease involved in platelet functions. In addition, this protein has been found to enhance the mechanical stability of cell-cell adhesion in the skin, and defects in this gene have been associated with an autosomal-recessive form of exfoliative ichthyosis. Diseases associated with SERPINB8 include Peeling Skin Syndrome 5 and Exfoliative Ichthyosis. Among its related pathways are Response to elevated platelet cytosolic Ca2+ and CFTR-dependent regulation of ion channels in Airway Epithelium (norm and CF). The ov-serpins are a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381033 [Multi-domain]  Cd Length: 374  Bit Score: 53.48  E-value: 1.32e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 125 LSPTAVFGTLASLYLGALDHTADRLQAILGVpwkdkncTSRLDAHkvlsalQAVQGLLVAQGRADSQaqLLLSTVVGVFT 204
Cdd:cd19567    30 FSPMSVSSALAMVYMGAKGNTAAQMSQALCL-------SGNGDVH------RGFQSLLAEVNKTGTQ--YLLRTANRLFG 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 205 APGLHLKQPFVQGLALYTPVVLpRSLDFTE---------LDVAAEKIDRFMQAVTGWKTGCSLmgasvdSTLAFNTYVHF 275
Cdd:cd19567    95 EKTCDFLPTFKESCQKFYQAGL-EELSFAEdteecrkhiNDWVSEKTEGKISEVLSAGTVCPL------TKLVLVNAIYF 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 276 QGKMKG-FSLLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESA-CLLLIQPHYASDLDKVE-GLTF 352
Cdd:cd19567   168 KGKWNEqFDRKYTRGMPFKTNQEKKTVQMMFKHAKFKMGHVDEVNMQVLELPYVEEElSMVILLPDENTDLAVVEkALTY 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 353 QQNSlNWM--KKLSPRTIHLTMPQLVLQGSYDLQDLLAQAEL-PAILHTELNLQKLSNDR-IRVGEVLNSIFFELEADER 428
Cdd:cd19567   248 EKFR-AWTnpEKLTESKVQVFLPRLKLEESYDLETFLRNLGMtDAFEEAKADFSGMSTKKnVPVSKVAHKCFVEVNEEGT 326
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1859470595 429 EPTESTQQLNKPEVLEV----TLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19567   327 EAAAATAVVRNSRCCRMeprfCADHPFLFFIRHHKTNSILFCGRFSSP 374
serpinI1_NSP cd02048
serpin family I member 1, neuroserpin; Neuroserpin (NSP, also called proteinase inhibitor 12 ...
124-469 1.68e-07

serpin family I member 1, neuroserpin; Neuroserpin (NSP, also called proteinase inhibitor 12/PI-12) is an inhibitory member of the serpin family that reacts preferentially with tissue-type plasminogen activator (tPA). It is located in neurons in regions of the brain where tPA is also found, suggesting that neuroserpin is the selective inhibitor of tPA in the central nervous system (CNS). This subgroup corresponds to clade I of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381005 [Multi-domain]  Cd Length: 372  Bit Score: 53.29  E-value: 1.68e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVpwkdknctSRLDAHKVLSALQAVQGLLVAQgradsQAQLLLSTVVGVF 203
Cdd:cd02048    25 LFSPLSIALAMGMVELGAQGSTLKEIRHSMGY--------DSLKNGEEFSFLKDFSNMVTAK-----ESQYVMKIANSLF 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFVQGLALYTPVVLpRSLDFTELDVAAEKIDRFMQAVTG--WKTGCSLMGASVDSTLAFNTYVHFQGKMKG 281
Cdd:cd02048    92 VQNGFHVNEEFLQMMKKYFNAEV-NHVDFSQNVAVANYINKWVENHTNnlIKDLVSPRDFDALTYLALINAVYFKGNWKS 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 282 ---------FSllaepqeFWVDNSTSVSVPMLSGMGTFQH--WSDIQDN----FSVTQVPFT-ESACLLLIQPHYASDLD 345
Cdd:cd02048   171 qfrpentrtFS-------FTKDDESEVQIPMMYQQGEFYYgeFSDGSNEaggiYQVLEIPYEgDEISMMIVLSRQEVPLA 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 346 KVEGLTFQQNSLNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLS-NDRIRVGEVLNSIFFEL- 423
Cdd:cd02048   244 TLEPLVKAQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKDADLTAMSdNKELFLSKAVHKSFLEVn 323
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1859470595 424 -EADEREPTESTQQLNKPEVL--EVTLNRPFLFAVYDQSATALHFLGRV 469
Cdd:cd02048   324 eEGSEAAAVSGMIAISRMAVLypQVIVDHPFFFLIRNRKTGTILFMGRV 372
serpinL_nematode cd19581
serpin family L, serpin family proteins from nematodes; The role of nematode serpins remains ...
120-455 2.96e-07

serpin family L, serpin family proteins from nematodes; The role of nematode serpins remains largely elusive. The only nematode serpin for which experimental evidence indicates an evasive function is Brugia malayi SPN-2 which specifically inhibits two human neutrophil-derived serine proteinases, cathepsin G and elastase. Less is known of Brugia malayi SPN-1, which is present at all stages of the parasite life cycle and could exist to inhibit a cognate proteinase endogenous to the parasite. Schistosoma serpins are hypothesized to play a role in both the physiological control of elastase within the schistosomes, and protection of the parasite from activated neutrophils during inflammation. Caenorhabditis elegans serpins are thought to regulate endogenous serine proteinases as well as inhibit proteinases produced by pathogenic microorganisms. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381047 [Multi-domain]  Cd Length: 357  Bit Score: 52.28  E-value: 2.96e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 120 HGATVLSPTAVFGTLASLYLGALDHTADRL-QAILgvpwkdKNCT-SRLDAH--KVLSALQAvqgllvaqgrADSQAQLL 195
Cdd:cd19581    16 TESLVFSPLSIALALALVHAGAKGETRTEIrNALL------KGATdEQIINHfsNLSKELSN----------ATNGVEVN 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 196 LSTvvGVFTAPGLHLKQPFVQGL-ALYTPVVlpRSLDFTELDVAAEKIDRFMQAVTGWKTgCSLMGA--SVDSTLAFNTY 272
Cdd:cd19581    80 IAN--RIFVNKGFTIKKAFLDTVrKKYNAEA--ESLDFSKTEETAKTINDFVREKTKGKI-KNIITPesSKDAVALLINA 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 273 VHFQGKMK-GFS-LLAEPQEFWVDNSTSVSVPMLSGMGTFQHWSDiQDNFSVTQVPFTESACLLLI-----QPHYASDLD 345
Cdd:cd19581   155 IYFKADWQnKFSkESTSKREFFTSENEKREVDFMHETNADRAYAE-DDDFQVLSLPYKDSSFALYIflpkeRFGLAEALK 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 346 KVEGLTFQqnslNWMKKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIRVGEVLNSIFFELEA 425
Cdd:cd19581   234 KLNGSRIQ----NLLSNCKRTLVNVTIPKFKIETEFNLKEALQALGITEAFSDSADLSGGIADGLKISEVIHKALIEVNE 309
                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 1859470595 426 DEREPTEST------QQLNKPEVLEVTLNRPFLFAV 455
Cdd:cd19581   310 EGTTAAAATalrmvfKSVRTEEPRDFIADHPFLFAL 345
serpinB14_OVA cd02059
serpin family B member 14, ovalbumin; The chicken protein ovalbumin (OVA3), a storage protein ...
126-472 4.01e-07

serpin family B member 14, ovalbumin; The chicken protein ovalbumin (OVA3), a storage protein from egg white, lacking a loop insertion mechanism and therefore protease inhibitory activity, is a historical member of the serpin superfamily and the founding member of the subgroup known as ov-serpins (ovalbumin-related serpins). It has several modifications, including N-terminal acetylation, phosphorylation, and glycosylation. Ovalbumin is secreted from the cell, targeted by an internal signal sequence, rather than the N-terminal signal sequence commonly found in other secreted proteins. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381015 [Multi-domain]  Cd Length: 385  Bit Score: 52.18  E-value: 4.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 126 SPTAVFGTLASLYLGALDHTADRLQAILgvpwkdknctsRLDAhkvlsaLQAVQGLLVAQGRADSQAQLLLSTVVGVFTA 205
Cdd:cd02059    30 SPLSIISALAMVYLGAKDSTRTQINKVV-----------HFDK------LPGFGDSIEAQCGTSVNVHSSLRDILNQITK 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 206 P----GLHLKQPFvqgLALYTPVVLP--------------RSLDF-TELDVAAEKIDRFMQAVTGWKTGCSLMGASVDS- 265
Cdd:cd02059    93 PndvySFSLASRL---YAEETYPILPeylqcvkelyrgglEPVNFqTAADQARELINSWVESQTNGIIRNVLQPSSVDSq 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 266 -TLAFNTYVHFQGKMKGFSLLAEPQE--FWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTE-SACLLLIQPHYA 341
Cdd:cd02059   170 tAMVLVNAIYFKGLWEKAFKDEDTQEmpFRVTEQESKPVQMMYQIGSFKVASMASEKMKILELPFASgTMSMLVLLPDEV 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 342 SDLDKVEG-LTFQQ----NSLNWMKKlspRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSN-DRIRVGEV 415
Cdd:cd02059   250 SGLEQLEStISFEKltewTSSNVMEE---RKIKVYLPRMKMEEKYNLTSVLMAMGITDLFSSSANLSGISSaESLKISQA 326
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1859470595 416 LNSIFFELEADEREPTESTQQLN--KPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd02059   327 VHAAHAEINEAGREVVGSAEAGVdaASVSEEFRADHPFLFCIKHNPTNAILFFGRCVSP 385
serpin77Ba-like_insects cd19598
insect serpins similar to Drosophila melanogaster Serpin 77Ba; Serpins in insects function ...
124-472 2.90e-06

insect serpins similar to Drosophila melanogaster Serpin 77Ba; Serpins in insects function within development, wound healing and immunity. Drosophila melanogaster Serpin 77Ba plays an essential role in regulating the tracheal melanization immune response to bacterial and fungal infection. Insect serpins from pine beetle, diamondback moth, red flour beetle, mosquito, silkworm, and fruit fly are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381062 [Multi-domain]  Cd Length: 376  Bit Score: 49.47  E-value: 2.90e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVPwKDKNCTSRldAHKVLSalqavQGLLVaqgradSQAQLLLSTVVGVF 203
Cdd:cd19598    27 VISPFSVWSLLSLLSEGASGETLKELRKVLRLP-VDNKCLRN--FYRALS-----NLLNV------KTSGVELESLNAIF 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFVQgLALYTPVVLPRSLDFTELDVAAEKIDRFMQAVTGwktgcslmGA---SVDSTLAFNTYV------H 274
Cdd:cd19598    93 TDKNFPVKPDFRS-VVQKTYDVKVVPVDFSNSTKTANIINEYISNATH--------GRiknAVKPDDLENARMlllsalY 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 275 FQGK-MKGF-SLLAEPQEFWVDNSTSV-SVPMLSGMGTFQHWSDIQDNFSVTQVPF--TESACLLLIQPHYASDLDKVEG 349
Cdd:cd19598   164 FKGKwKFPFnKSDTKVEPFYDENGNVIgEVNMMYQKGPFPYSNIKELKAHVLELPYgkDNRLSMLVILPYKGVKLNTVLN 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 350 LtFQQNSLNWM-KKL-------SPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTEL-NLQKLSNDRIRVGEVLNSIf 420
Cdd:cd19598   244 N-LKTIGLRSIfDELerskeefSDDEVEVYLPRFKISSDLNLNEPLIDMGIRDIFDPSKaNLPGISDYPLYVSSVIQKA- 321
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1859470595 421 fELEADER-----EPTESTQQlNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19598   322 -EIEVTEEgtvaaAVTGAEFA-NKILPPRFEANRPFAYLIVEKSTNLILFAGVYSNP 376
serpinB cd19956
serpin B family, ov-serpins; The clade B of the serpin superfamily corresponds to the ...
124-469 4.82e-06

serpin B family, ov-serpins; The clade B of the serpin superfamily corresponds to the ovalbumin family of serpins (ov-serpins), a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). Family members are also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381072 [Multi-domain]  Cd Length: 376  Bit Score: 48.71  E-value: 4.82e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAIL---GVPWKDKNCTSRLDAHkvlSALQAvqgLLVAQGRADsqAQLLLSTVV 200
Cdd:cd19956    23 FFSPLSISSALAMVLLGARGNTAAQMEKVLhfnKVTESGNQCEKPGGVH---SGFQA---LLSEINKPS--TSYLLSIAN 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 201 GVFTAPGLHLKQPFVQG-LALYTPVvlPRSLDFTE-LDVAAEKIDRFMQAVTGWKTGCSLMGASVDST--LAFNTYVHFQ 276
Cdd:cd19956    95 RLFGEKTYPFLQQYLDCtKKLYQAE--LETVDFKNaPEEARKQINSWVESQTEGKIKNLLPPGSIDSStkLVLVNAIYFK 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 277 GK-MKGFS-LLAEPQEFWVDNSTSVSVPMLSGMGTFqHWSDIQD-NFSVTQVPFTE---SACLLLiqPHYASDLDKVE-G 349
Cdd:cd19956   173 GKwEKQFDkENTKEMPFRLNKNESKPVQMMYQKGKF-KLGYIEElNAQVLELPYAGkelSMIILL--PDDIEDLSKLEkE 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 350 LTFqQNSLNWMK--KLSPRTIHLTMPQLVLQGSYDLQDLLAQAELP-AILHTELNLQKLSNDR-IRVGEVLNSIFfeLEA 425
Cdd:cd19956   250 LTY-EKLTEWTSpeNMKETEVEVYLPRFKLEESYDLKSVLESLGMTdAFDEGKADFSGMSSAGdLVLSKVVHKSF--VEV 326
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1859470595 426 DErEPTEST-------QQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRV 469
Cdd:cd19956   327 NE-EGTEAAaatgaviVERSLPIPEEFKADHPFLFFIRHNKTNSILFFGRF 376
serpinM_ShSPI cd19582
serpin family M, Schistosoma haematobium serpin; ShSPI is a serpin from the trematode ...
124-472 2.21e-05

serpin family M, Schistosoma haematobium serpin; ShSPI is a serpin from the trematode Schistosoma haematobium. The protein is exposed on the surface of invading cercaria as well as of adult worms, suggesting its involvement in the parasite-host interaction. It has several distinctive features, mostly concerning the helical subdomain of the protein. It is proposed that these peculiarities are related to the unique biological properties of a small serpin subfamily which is conserved among pathogenic schistosomes. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381048 [Multi-domain]  Cd Length: 388  Bit Score: 46.60  E-value: 2.21e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYL--GALDHTADRL-QAILGvpwKDKN--CTSRLDAHKVLSALQAVQ-GLLVAQGRADSQAQLLLS 197
Cdd:cd19582    24 VASPIGVLFLLSALLGsgGPQGNTAKEIaQALVL---KSDKetCNLDEAQKEAKSLYRELRtSLTNEKTEINRSGKKVIS 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 198 TVVGVFTAPGLHLKQPFVQGLALYTPVVLPRsLDFTELDVAAEKIDRFMQAVTG------WKTGCSLmgaSVDSTLAFNT 271
Cdd:cd19582   101 ISNGVFLKKGYKVEPEFNESIANFFEDKVKQ-VDFTNQSEAFEDINEWVNSKTNglipqfFKSKDEL---PPDTLLVLLN 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 272 YVHFQGK-MKGFSLL-AEPQEFWVDNSTSVSVPMLSGMGTFQHWSDIQDNFSVTQVPF-TESACLLLIQPHYASDLDKVE 348
Cdd:cd19582   177 VFYFKDVwKKPFMPEyTTKEDFYLSKGRSIQVPMMHIEEQLVYGKFPLDGFEMVSKPFkNTRFSFVIVLPTEKFNLNGIE 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 349 GLTFQQNSL-NWMKKLSPRTIHLTMPQLVLQGSYDLQDLL-----------AQAELPAILhtelnlqklSNDRIRVGEVL 416
Cdd:cd19582   257 NVLEGNDFLwHYVQKLESTQVSLKLPKFKLESTLDLIEILksmgirdlfdpIKADLTGIT---------SHPNLYVNEFK 327
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1859470595 417 NSIFFELEADEREPTEST------QQLNKPEVlEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19582   328 QTNVLKVDEAGVEAAAVTsiiilpMSLPPPSV-PFHVDHPFICFIYDSQLKMPLFAARIINP 388
serpin_poxvirus cd19585
serpin-like proteins found in poxviruses; These are viral serpins from poxviridae that are not ...
289-472 5.69e-05

serpin-like proteins found in poxviruses; These are viral serpins from poxviridae that are not in the Orthopoxvirus branch (cowpox, ectromelia, vaccinia, variola, and rabbitpox) that contains clade N serpins (viral serpin-1/SPI-1-like and viral serpin-2/SPI-2-like) and clade O serpins (viral serpin-3/SPI-3-like). The members here include fowlpox virus, canarypox virus, deerpox virus, tanapox virus, an cotia virus and belong to other poxviridae branches including Leporipoxvirus, Yatapoxvirus, and Avipoxvirus. These viruses have a variety of hosts including humans, birds, and mice. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381051 [Multi-domain]  Cd Length: 345  Bit Score: 45.08  E-value: 5.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 289 QEFWVDNSTSVSVPMLSGMGTFQHW--SDIQdNFSVTQVPFTES--ACLLLIQPHYASDLDKVEGLTFQQNSLN-WMKKL 363
Cdd:cd19585   159 HIFYVDKYTTKTVPMMATKGMFGTFycPEIN-KSSVIEIPYKDNtiSMLLVFPDDYKNFIYLESHTPLILTLSKfWKKNM 237
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 364 SPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDR-IRVGEVLNSIffELEADEREPTESTQQLNKPEV 442
Cdd:cd19585   238 KYDDIQVSIPKFSIESQHDLKSVLTKLGITDIFDKDNAMFCASPDKvSYVSKAVQSQ--IIFIDERGTTADQKTWILLIP 315
                         170       180       190
                  ....*....|....*....|....*....|
gi 1859470595 443 LEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19585   316 RSYYLNRPFMFLIEYKPTGTILFSGKIKDP 345
serpinB6_CAP cd19565
serpin family B member 6, cytoplasmic antiproteinase; Cytoplasmic antiproteinase (CAP, also ...
125-472 1.04e-04

serpin family B member 6, cytoplasmic antiproteinase; Cytoplasmic antiproteinase (CAP, also called proteinase inhibitor 6/PI6 or placental thrombin inhibitor/PTI) is thought to be involved in the regulation of serine proteinases present in the brain or extravasated from the blood. It may play an important role in the inner ear in the protection against leakage of lysosomal content during stress; loss of this protection results in cell death and sensorineural hearing loss. It is an inhibitor of cathepsin G, kallikrein-8 and thrombin. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381031 [Multi-domain]  Cd Length: 378  Bit Score: 44.51  E-value: 1.04e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 125 LSPTAVFGTLASLYLGALDHTADRLQAILGVpwkDKNCTSRLDAHkvlsalQAVQGLLVAQGRADSqaQLLLSTVVGVFT 204
Cdd:cd19565    29 FSPMSISSALAMVYMGAKGNTAAQMAQTLSL---NKSSGGGGDIH------QGFQSLLTEVNKTGT--QYLLRTANRLFG 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 205 APGLHLKQPFVQGLALYTPVVLpRSLDF-TELDVAAEKIDRFMQAVTGWKTGCSLMGASVDS--TLAFNTYVHFQGKM-K 280
Cdd:cd19565    98 EKTCDFLSSFKDSCQKFYQAEM-EELDFiSATEKSRKHINTWVAEKTEGKIAELLSPGSVNPltRLVLVNAVYFKGNWdE 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 281 GFSLL-AEPQEFWVDNSTSVSVPMLSGMGTFQHwSDIQDNFS-VTQVPFTESACLLLIQ-PHYASDLDKVEGLTFQQNSL 357
Cdd:cd19565   177 QFNKEnTEERPFKVSKNEEKPVQMMFKKSTFKK-TYIGEIFTqILVLPYVGKELNMIIMlPDETTDLRTVEKELTYEKFV 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 358 NWMK--KLSPRTIHLTMPQLVLQGSYDLQDLLAQAELP-AILHTELNLQKLSNDR-IRVGEVLNSIFFELEADEREPTES 433
Cdd:cd19565   256 EWTRldMMDEEEVEVFLPRFKLEESYDMESVLYKLGMTdAFELGRADFSGMSSKQgLFLSKVVHKSFVEVNEEGTEAAAA 335
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1859470595 434 TQQLNKPEVLEVT----LNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19565   336 TAAIMMMRCARFVprfcADHPFLFFIQHSKTNGILFCGRFSSP 378
serpinB11_epipin cd19570
serpin family B member 11, epipin; Epipin/SERPINB11 has no serine protease inhibitory activity, ...
298-472 1.29e-04

serpin family B member 11, epipin; Epipin/SERPINB11 has no serine protease inhibitory activity, probably due to mutations in the scaffold, impairing conformational changes, and may have evolved a non-inhibitory function. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381036 [Multi-domain]  Cd Length: 392  Bit Score: 44.01  E-value: 1.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 298 SVSVPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQ-PHYASDLDKVEGL----TFQQ--NSLNWMKklspRTIHL 370
Cdd:cd19570   209 SVPVEMMYQSGTFKLASIKEPQMQVLELPYVNNKLSMIILlPVGTANLEQIEKQlnvkTFKEwtSSSNMVE----REVEV 284
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 371 TMPQLVLQGSYDLQDLLAQAELPAIL-HTELNLQKLSNDR-IRVGEVLNSIFFELEADEREPTESTQQLNKPEVLEVTL- 447
Cdd:cd19570   285 HIPRFKLEIKYELNSLLKSLGMTDIFdQAKADLSGMSPDKgLYLSKVIHKSYVDVNEEGTEAAAATGDSIAVKRLPVRAq 364
                         170       180
                  ....*....|....*....|....*...
gi 1859470595 448 ---NRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19570   365 fvaNHPFLFFIRHISTNTILFAGKFASP 392
serpinB12_yukopin cd19571
serpin family B member 12, yukopin; Yukopin, encoded by the SERPINB12 gene, is a member of the ...
291-472 2.75e-04

serpin family B member 12, yukopin; Yukopin, encoded by the SERPINB12 gene, is a member of the serpin superfamily of serine protease inhibitors. It inhibits trypsin and plasmin, but not thrombin, coagulation factor Xa, or urokinase-type plasminogen activator. An important paralog of this gene is SERPINB4. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381037 [Multi-domain]  Cd Length: 420  Bit Score: 43.32  E-value: 2.75e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 291 FWVDNSTSVSVPMLSGMGTFQ--HWSDIQDNfsVTQVPFTESA-CLLLIQPHYASD----LDKVEGLTFQQNSLNWM--K 361
Cdd:cd19571   227 FCLNENEKKTVKMMNQKGLFRigFIEELKAQ--ILEMKYTKGKlSMFVLLPSCSSDnlkgLEELEKKITHEKILAWSssE 304
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 362 KLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAIL-HTELNLQKLS-NDRIRVGEVLNSIFFELEADEREPTEST---QQ 436
Cdd:cd19571   305 NMSEETVAISFPQFTLEDSYDLNSILQDMGITDIFdETKADLTGISkSPNLYLSKIVHKTFVEVDEDGTQAAAASgavGA 384
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1859470595 437 LNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19571   385 ESLRSPVTFNANHPFLFFIRHNKTQTILFYGRVCSP 420
serpinB10_bomapin cd19569
serpin family B member 10, bomapin; Bomapin (also called proteinase inhibitor 10/PI10) is a ...
126-472 2.79e-04

serpin family B member 10, bomapin; Bomapin (also called proteinase inhibitor 10/PI10) is a hematopoietic- and myeloid leukaemia-specific protease inhibitor which is thought to augment proliferation or apoptosis of leukemia cells, depending on growth factor availability. Bomapin is expressed only in bone marrow, leukocytes of patients with myeloid leukaemia that correspond to myeloid progenitors, and promyelocytic leukaemia cell lines (HL60, THP1, and AML-193), but it is not present in terminally differentiated leukocytes. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381035 [Multi-domain]  Cd Length: 397  Bit Score: 43.31  E-value: 2.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 126 SPTAVFGTLASLYLGALDHTA---------DRLQAILGVPWKDKNCTSRLDAHKVLSALQAVQGLLvAQGRADSQAqLLL 196
Cdd:cd19569    31 SPWSISTSLAMVYLGTKGTTAaqmaqvlqfNRDQDVKSDPESEKKRKMEFNSSKSEEIHSDFQTLI-SEILKPSNA-YVL 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 197 STVVGVFTAPGLHLKQPFVQGLALYTPVVlPRSLDFTEL-DVAAEKIDRFMQAVTGWKTGCSLMGASVDST--LAFNTYV 273
Cdd:cd19569   109 KTANAIYGEKTYPFHNKYLEDMKTYFGAE-PQSVNFVEAsDQIRKEINSWVESQTEGKIPNLLPDDSVDSTtrMVLVNAL 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 274 HFQGKMKGFSLLAEPQE--FWVDNSTSVSVPMLSgMGTFQHWSDIQDNFSVTQVPFTESA--CLLLIQPHYASDLDKVE- 348
Cdd:cd19569   188 YFKGIWEHQFLVQNTTEkpFRINKTTSKPVQMMS-MKKKLQVFHIEKPQAIGLQLYYKSRdlSLLILLPEDINGLEQLEk 266
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 349 GLTFQQNSlNW----MKKLSprTIHLTMPQLVLQGSYDLQDLLAQAELP-AILHTELNLQKLSNDR-IRVGEVLNSIFFE 422
Cdd:cd19569   267 AITYEKLN-EWtsadMMELY--EVQLHLPKFKLEESYDLKSTLSSMGMSdAFSQSKADFSGMSSERnLFLSNVFHKAFVE 343
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1859470595 423 L-----EADEREPTESTQQLNKPEVlEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19569   344 IneqgtEAAAGTGSEISVRIKVPSI-EFNADHPFLFFIRHNKTNSILFYGRFCSP 397
serpinE3 cd19574
serpin family E member 3; The function of serpin E3 is not known. It is a member of clade E, ...
124-472 7.80e-04

serpin family E member 3; The function of serpin E3 is not known. It is a member of clade E, which also includes nexin and plasminogen activator inhibitor type 1, of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381040 [Multi-domain]  Cd Length: 384  Bit Score: 41.54  E-value: 7.80e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 124 VLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKnctsrldahKVLSALQAVQGLLvaqgrADSQAQLLLSTVVGVF 203
Cdd:cd19574    34 IVSPASVSLSLELLQFGARGNTLAQLENALGYNVHDP---------RVQDFLLKVYEDL-----TNSSQGTRLQLACTLF 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 204 TAPGLHLKQPFVQGLALYTPVVLPRSlDFTELDVAAEKIDRFMQAVTGWK-------TGCSLMGASVdSTLAFNTYVHFQ 276
Cdd:cd19574   100 VQTGVQLSPEFTQHASGWANSSLQQA-NFSEPNHTASQINQWVSRQTAGWilsqgscEGEALWWAPL-PQMALVSTMSFQ 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 277 GKMKGFSLLAEPQE--FWVDNSTSVSVPMLSGM-----GTFQHWSDIQdnFSVTQVPFT-ESACLLLIQP-HYASDLDKV 347
Cdd:cd19574   178 GTWQKQFSFTDTQNlpFTLADGSTLKVPMMYQTaevnfGQFQTPSEQR--YTVLELPYLgNSLSLFLVLPsDRKTPLSLI 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 348 EG-LTFQQNSLnWMKKLSPRTIHLTMPQLVLQGSYDLQDLL-AQAELPAILHTELNLQKLS-NDRIRVGEVLNSIFFELE 424
Cdd:cd19574   256 EPhLTARTLAL-WTTSLRRTKMDIFLPRFKIQNKFNLKSVLpALGISDAFDPLKADFKGISgQDGLYVSEAIHKAKIEVT 334
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1859470595 425 ADEREPTESTQQ--LNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19574   335 EDGTKAAAATAMvlLKRSRAPVFKADRPFLFFLRQANTGSILFIGRVMNP 384
serpinB1_LEI cd19560
serpin family B member 1 (serpin B1), leukocyte elastase inhibitor (LEI); Leukocyte elastase ...
344-472 8.54e-03

serpin family B member 1 (serpin B1), leukocyte elastase inhibitor (LEI); Leukocyte elastase inhibitor (LEI , also known as proteinase inhibitor 2/PI2, monocyte neutrophil elastase inhibitor/MNEI, EI, or ELANH2) is a member of the clade B serpins or ov-serpins (ovalbumin related serpins) that in humans is encoded by the SERPINB1 gene. Human SERPINB1 is a potent intracellular inhibitor for granzyme H (GzmH) which is constitutively expressed in NK cells and induces target cell death. GzmH cleaves SERPINB1 at Phe343 in the RCL to mediate suicide inhibition. Equine leukocyte elastase inhibitor (HLEI) in contrast to other serpins contains no carbohydrate and has a blocked amino terminus. HLEI is a thymosin beta4-binding protein suggesting a physiological role for cytoplasmic elastase inhibitors in the thymosin B4-regulated rearrangement of the cytoskeleton of leukocytes. HLEI has been proposed to be involved with the control of intracellular protein turnover or the control of elastinolytic activity during inflammation. Ov-serpins are a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381028 [Multi-domain]  Cd Length: 379  Bit Score: 38.49  E-value: 8.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859470595 344 LDKVEG-LTFQqNSLNWMK--KLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAIL-HTELNLQKLSNDR-IRVGEVLNS 418
Cdd:cd19560   243 LKKLEKqLTLE-KLHEWTKpeNLMNIDVHVHLPRFKLEESYDLKSHLARLGMQDLFdSGKADLSGMSGARdLFVSKVVHK 321
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1859470595 419 IFFEL-----EADEREPTESTQQLNKPEVlEVTLNRPFLFAVYDQSATALHFLGRVANP 472
Cdd:cd19560   322 SFVEVneegtEAAAATAGIAMFCMLMPEE-EFTADHPFLFFIRHNPTNSILFFGRYSSP 379
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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