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Conserved domains on  [gi|1924573859|ref|NP_001375340|]
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sialate:O-sulfotransferase 1 isoform 3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
WSC smart00321
present in yeast cell wall integrity and stress response component proteins; Domain present in ...
 142-234 8.54e-35

present in yeast cell wall integrity and stress response component proteins; Domain present in WSC proteins, polycystin and fungal exoglucanase


:

Pssm-ID: 214616 [Multi-domain]  Cd Length: 95  Bit Score: 122.19  E-value: 8.54e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1924573859  142 RGTYIGCFSDDgHERTLKGAVFYDLRKMTVSHCQDACAERSYVYAGLEAGAECYCGNRLPAVSV---GLEECNHECKGEK 218
Cdd:smart00321   1 GATYVGCYSDN-SSRTLAAVSSYAYHNMSVEACSNFCFSAGYALAALENGNECYCGDSLPSTSVsasDSSQCSTTCSGYP 79

                           90
                   ....*....|....*.
gi 1924573859  219 GSVCGAVDRLSVYRVD 234
Cdd:smart00321  80 AEVCGGPNRLSVYVLA 95
WSC super family cl47036
present in yeast cell wall integrity and stress response component proteins; Domain present in ...
 245-287 1.34e-10

present in yeast cell wall integrity and stress response component proteins; Domain present in WSC proteins, polycystin and fungal exoglucanase


The actual alignment was detected with superfamily member smart00321:

Pssm-ID: 214616 [Multi-domain]  Cd Length: 95  Bit Score: 57.09  E-value: 1.34e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1924573859  245 TATYRGCFRLPENITHAFPSSLIQANVTVGTCSGFCSQKVYRV 287
Cdd:smart00321   1 GATYVGCYSDNSSRTLAAVSSYAYHNMSVEACSNFCFSAGYAL 43
 
Name Accession Description Interval E-value
WSC smart00321
present in yeast cell wall integrity and stress response component proteins; Domain present in ...
 142-234 8.54e-35

present in yeast cell wall integrity and stress response component proteins; Domain present in WSC proteins, polycystin and fungal exoglucanase


Pssm-ID: 214616 [Multi-domain]  Cd Length: 95  Bit Score: 122.19  E-value: 8.54e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1924573859  142 RGTYIGCFSDDgHERTLKGAVFYDLRKMTVSHCQDACAERSYVYAGLEAGAECYCGNRLPAVSV---GLEECNHECKGEK 218
Cdd:smart00321   1 GATYVGCYSDN-SSRTLAAVSSYAYHNMSVEACSNFCFSAGYALAALENGNECYCGDSLPSTSVsasDSSQCSTTCSGYP 79

                           90
                   ....*....|....*.
gi 1924573859  219 GSVCGAVDRLSVYRVD 234
Cdd:smart00321  80 AEVCGGPNRLSVYVLA 95
WSC pfam01822
WSC domain; This domain is involved in carbohydrate binding.
 145-224 1.37e-27

WSC domain; This domain is involved in carbohydrate binding.


Pssm-ID: 460348  Cd Length: 82  Bit Score: 102.92  E-value: 1.37e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1924573859 145 YIGCFSDDGHERTLKGAVFYDLRKMTVSHCQDACAERSYVYAGLEAGAECYCGNRLPAVSVG--LEECNHECKGEKGSVC 222
Cdd:pfam01822   1 YLGCYSDGTGGRRLLLGSSGDYDDMTPEKCIAFCSAAGYTYAGLEYGGECYCGNSLPSGSALadSSDCNTPCPGDSSQTC 80


                  ..
gi 1924573859 223 GA 224
Cdd:pfam01822  81 GG 82
WSC smart00321
present in yeast cell wall integrity and stress response component proteins; Domain present in ...
 245-287 1.34e-10

present in yeast cell wall integrity and stress response component proteins; Domain present in WSC proteins, polycystin and fungal exoglucanase


Pssm-ID: 214616 [Multi-domain]  Cd Length: 95  Bit Score: 57.09  E-value: 1.34e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1924573859  245 TATYRGCFRLPENITHAFPSSLIQANVTVGTCSGFCSQKVYRV 287
Cdd:smart00321   1 GATYVGCYSDNSSRTLAAVSSYAYHNMSVEACSNFCFSAGYAL 43
WSC pfam01822
WSC domain; This domain is involved in carbohydrate binding.
 248-287 1.59e-05

WSC domain; This domain is involved in carbohydrate binding.


Pssm-ID: 460348  Cd Length: 82  Bit Score: 42.45  E-value: 1.59e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1924573859 248 YRGCFRL-PENITHAFPSSLIQANVTVGTCSGFCSQKVYRV 287
Cdd:pfam01822   1 YLGCYSDgTGGRRLLLGSSGDYDDMTPEKCIAFCSAAGYTY 41
 
Name Accession Description Interval E-value
WSC smart00321
present in yeast cell wall integrity and stress response component proteins; Domain present in ...
 142-234 8.54e-35

present in yeast cell wall integrity and stress response component proteins; Domain present in WSC proteins, polycystin and fungal exoglucanase


Pssm-ID: 214616 [Multi-domain]  Cd Length: 95  Bit Score: 122.19  E-value: 8.54e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1924573859  142 RGTYIGCFSDDgHERTLKGAVFYDLRKMTVSHCQDACAERSYVYAGLEAGAECYCGNRLPAVSV---GLEECNHECKGEK 218
Cdd:smart00321   1 GATYVGCYSDN-SSRTLAAVSSYAYHNMSVEACSNFCFSAGYALAALENGNECYCGDSLPSTSVsasDSSQCSTTCSGYP 79

                           90
                   ....*....|....*.
gi 1924573859  219 GSVCGAVDRLSVYRVD 234
Cdd:smart00321  80 AEVCGGPNRLSVYVLA 95
WSC pfam01822
WSC domain; This domain is involved in carbohydrate binding.
 145-224 1.37e-27

WSC domain; This domain is involved in carbohydrate binding.


Pssm-ID: 460348  Cd Length: 82  Bit Score: 102.92  E-value: 1.37e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1924573859 145 YIGCFSDDGHERTLKGAVFYDLRKMTVSHCQDACAERSYVYAGLEAGAECYCGNRLPAVSVG--LEECNHECKGEKGSVC 222
Cdd:pfam01822   1 YLGCYSDGTGGRRLLLGSSGDYDDMTPEKCIAFCSAAGYTYAGLEYGGECYCGNSLPSGSALadSSDCNTPCPGDSSQTC 80


                  ..
gi 1924573859 223 GA 224
Cdd:pfam01822  81 GG 82
WSC smart00321
present in yeast cell wall integrity and stress response component proteins; Domain present in ...
 245-287 1.34e-10

present in yeast cell wall integrity and stress response component proteins; Domain present in WSC proteins, polycystin and fungal exoglucanase


Pssm-ID: 214616 [Multi-domain]  Cd Length: 95  Bit Score: 57.09  E-value: 1.34e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 1924573859  245 TATYRGCFRLPENITHAFPSSLIQANVTVGTCSGFCSQKVYRV 287
Cdd:smart00321   1 GATYVGCYSDNSSRTLAAVSSYAYHNMSVEACSNFCFSAGYAL 43
WSC pfam01822
WSC domain; This domain is involved in carbohydrate binding.
 248-287 1.59e-05

WSC domain; This domain is involved in carbohydrate binding.


Pssm-ID: 460348  Cd Length: 82  Bit Score: 42.45  E-value: 1.59e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1924573859 248 YRGCFRL-PENITHAFPSSLIQANVTVGTCSGFCSQKVYRV 287
Cdd:pfam01822   1 YLGCYSDgTGGRRLLLGSSGDYDDMTPEKCIAFCSAAGYTY 41
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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