View
Concise Results
Standard Results
Full Results
janus kinase and microtubule-interacting protein 3 isoform i [Homo sapiens]
Protein Classification
SMC_prok_B and JAKMIP_CC3 domain-containing protein ( domain architecture ID 13531091 )
SMC_prok_B and JAKMIP_CC3 domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
427-621
1.26e-83
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 265.59
E-value: 1.26e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 427 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 505
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 506 EYQALQRAYALLQEQ V GGTLDAERE -- TREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 583
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE ak TREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1972711383 584 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 621
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B super family
cl37069 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-816
5.07e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
TIGR02168 :Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 60.07
E-value: 5.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 265 relphaagagdasdh SGSPQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L SR 344
Cdd:TIGR02168 425 --------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L QA 489
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 345 KNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYVKS 424
Cdd:TIGR02168 490 RLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKAIA 563
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 425 V L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEGMA 492
Cdd:TIGR02168 564 F L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNALE 636
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 493 - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE t R E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK wi EE 565
Cdd:TIGR02168 637 l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE - I E E L EEKIEELEEK I AE LEKALAE lrk ELEELE -- EE 713
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 566 KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E AEGVT 645
Cdd:TIGR02168 714 LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E EAEEE 776
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 646 DIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D E ELD 725
Cdd:TIGR02168 777 LAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S E DIE 855
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 726 YRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L AQQR 805
Cdd:TIGR02168 856 SLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L RLEG 933
810
....*....|.
gi 1972711383 806 IKELEERIEAQ 816
Cdd:TIGR02168 934 LEVRIDNLQER 944
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
427-621
1.26e-83
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 265.59
E-value: 1.26e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 427 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 505
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 506 EYQALQRAYALLQEQ V GGTLDAERE -- TREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 583
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE ak TREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1972711383 584 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 621
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-816
5.07e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 60.07
E-value: 5.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 265 relphaagagdasdh SGSPQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L SR 344
Cdd:TIGR02168 425 --------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L QA 489
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 345 KNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYVKS 424
Cdd:TIGR02168 490 RLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKAIA 563
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 425 V L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEGMA 492
Cdd:TIGR02168 564 F L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNALE 636
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 493 - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE t R E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK wi EE 565
Cdd:TIGR02168 637 l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE - I E E L EEKIEELEEK I AE LEKALAE lrk ELEELE -- EE 713
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 566 KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E AEGVT 645
Cdd:TIGR02168 714 LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E EAEEE 776
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 646 DIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D E ELD 725
Cdd:TIGR02168 777 LAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S E DIE 855
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 726 YRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L AQQR 805
Cdd:TIGR02168 856 SLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L RLEG 933
810
....*....|.
gi 1972711383 806 IKELEERIEAQ 816
Cdd:TIGR02168 934 LEVRIDNLQER 944
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
498-819
1.35e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 58.79
E-value: 1.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 498 L R F R Q L TM E YQA L QRAYA LL Q - EQVGGT L DAERETR E Q L Q AE VQRAQ A RIED LE KA L A E QGQDMK wi E EKQA L YRRNQ E L 576
Cdd:COG1196 213 E R Y R E L KE E LKE L EAELL LL K l RELEAE L EELEAEL E E L E AE LEELE A ELAE LE AE L E E LRLELE -- E LELE L EEAQA E E 290
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 577 V E KIKQMETE E ARLRHEVQDA R DQN E L LE FRIL EL E E R E R kspaisfhhtpfvdgksplqvyc E A E GVTDIVVAELMKKL 656
Cdd:COG1196 291 Y E LLAELARL E QDIARLEERR R ELE E R LE ELEE EL A E L E E ----------------------- E L E ELEEELEELEEELE 347
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 657 DILGDNA vsnltn E EQVVVIQ A RTV L TL AE KW L QQI EE TEAA L QRKMVDLESEKELFSK Q KGY L D E ELDYRKQA L DQANK 736
Cdd:COG1196 348 EAEEELE ------ E AEAELAE A EEA L LE AE AE L AEA EE ELEE L AEELLEALRAAAELAA Q LEE L E E AEEALLER L ERLEE 421
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 737 HIL ELE AM L YDALQQ E AGAKV A ELLSE EE REK L KVAV E Q w KRQVMS EL R E RD A QILRERM ELL QLAQQRIKE L EERI EA Q 816
Cdd:COG1196 422 ELE ELE EA L AELEEE E EEEEE A LEEAA EE EAE L EEEE E A - LLELLA EL L E EA A LLEAALA ELL EELAEAAAR L LLLL EA E 500
...
gi 1972711383 817 KRQ 819
Cdd:COG1196 501 ADY 503
PTZ00121
PTZ00121 MAEBL; Provisional
38-599
1.72e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.05
E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 38 E LQQEKSKVS K V E R E K N Q E LRQVR E ----- H EQHKT A VLLT E LKT K LH E E K MK E LQAVRETLLRQH E AELLRVI K I K DN E 112
Cdd:PTZ00121 1234 E AKKDAEEAK K A E E E R N N E EIRKF E earma H FARRQ A AIKA E EAR K AD E L K KA E EKKKADEAKKAE E KKKADEA K K K AE E 1313
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 113 NQRLQALLSALRDG gpe K V K TVLLSEAK EEAKK GF E VE K VKMQQEIS E LKG A KRQ v E EA LTLVIQAD K I KA AEIRSVYH l 192
Cdd:PTZ00121 1314 AKKADEAKKKAEEA --- K K K ADAAKKKA EEAKK AA E AA K AEAEAAAD E AEA A EEK - A EA AEKKKEEA K K KA DAAKKKAE - 1388
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 193 HQEEITRI KK EC E r E IRRLME E I K FKDR A VFVLER ----- E LGVQ A GH A QRLQLQKEAL DE QLSQVR EA DRHPGSPRR -- 265
Cdd:PTZ00121 1389 EKKKADEA KK KA E - E DKKKAD E L K KAAA A KKKADE akkka E EKKK A DE A KKKAEEAKKA DE AKKKAE EA KKAEEAKKK ae 1467
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 266 E LPH A AG A GDASDHSGSPQLDE K D A RRFQL K IA E LSAIIRKLEDRNALLSE E RNELLKRVRE AE SQY K PLLD K NKRLSR K 345
Cdd:PTZ00121 1468 E AKK A DE A KKKAEEAKKADEAK K K A EEAKK K AD E AKKAAEAKKKADEAKKA E EAKKADEAKK AE EAK K ADEA K KAEEKK K 1547
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 346 NED L SH A -- L RRM E N K L K f VTQENIEMRQRAGII R RPS sln DLDQSQDE R EVDFL KL QIV E QQNLID E LS K TL E TA gyvk 423
Cdd:PTZ00121 1548 ADE L KK A ee L KKA E E K K K - AEEAKKAEEDKNMAL R KAE --- EAKKAEEA R IEEVM KL YEE E KKMKAE E AK K AE E AK ---- 1619
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 424 sv LERDK L LRFRKQR KK MAK L P K PVVV E T ff GYD EE ASLESDGSSVSYQTDRTDQ tpc TP D DDLE E GMA K E E TELRFRQL 503
Cdd:PTZ00121 1620 -- IKAEE L KKAEEEK KK VEQ L K K KEAE E K -- KKA EE LKKAEEENKIKAAEEAKKA --- EE D KKKA E EAK K A E EDEKKAAE 1692
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 504 TMEYQ A LQRAY A llq E QVGGTLDA E RETR E Q L QAEVQRAQARI E DLE K ala E QGQ D M K WI EE kqal YRRNQ E LVE KI KQM 583
Cdd:PTZ00121 1693 ALKKE A EEAKK A --- E ELKKKEAE E KKKA E E L KKAEEENKIKA E EAK K --- E AEE D K K KA EE ---- AKKDE E EKK KI AHL 1762
570
....*....|....*.
gi 1972711383 584 ET EE ARLRH E VQDARD 599
Cdd:PTZ00121 1763 KK EE EKKAE E IRKEKE 1778
COG2433
COG2433 Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
525-613
1.89e-03
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain]
Cd Length: 644
Bit Score: 41.77
E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 525 L DA E R E TREQ L QAE V Q R AQ A RI E D LE KA L A E QGQDMKWI E EKQALY R RNQELV ---- EK I KQMET E EA RL RH E VQDA R DQ 600
Cdd:COG2433 408 L TE E E E EIRR L EEQ V E R LE A EV E E LE AE L E E KDERIERL E RELSEA R SEERRE irkd RE I SRLDR E IE RL ER E LEEE R ER 487
90
....*....|...
gi 1972711383 601 N E L L EFRILE L E E 613
Cdd:COG2433 488 I E E L KRKLER L K E 500
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
427-621
1.26e-83
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 265.59
E-value: 1.26e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 427 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 505
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 506 EYQALQRAYALLQEQ V GGTLDAERE -- TREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 583
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE ak TREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1972711383 584 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 621
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-816
5.07e-09
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 60.07
E-value: 5.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 265 relphaagagdasdh SGSPQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L SR 344
Cdd:TIGR02168 425 --------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L QA 489
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 345 KNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYVKS 424
Cdd:TIGR02168 490 RLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKAIA 563
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 425 V L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEGMA 492
Cdd:TIGR02168 564 F L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNALE 636
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 493 - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE t R E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK wi EE 565
Cdd:TIGR02168 637 l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE - I E E L EEKIEELEEK I AE LEKALAE lrk ELEELE -- EE 713
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 566 KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK spaisfhhtpfvdgksp L QVYC E AEGVT 645
Cdd:TIGR02168 714 LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE ----------------- L EERL E EAEEE 776
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 646 DIVVAELMKK L DILGDNAVSN L TNEEQVVVI q A R TV LTL AEKWLQQIE E TEAA L Q R KMVDL E SEK E LFSK Q KGY L D E ELD 725
Cdd:TIGR02168 777 LAEAEAEIEE L EAQIEQLKEE L KALREALDE - L R AE LTL LNEEAANLR E RLES L E R RIAAT E RRL E DLEE Q IEE L S E DIE 855
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 726 YRKQALDQANKH I L ELE AM L YDA L QQE A GAKV A EL L SEE E R E K L KVAVEQWKRQVMSEL RE RDA qi LRE RMEL L Q L AQQR 805
Cdd:TIGR02168 856 SLAAEIEELEEL I E ELE SE L EAL L NER A SLEE A LA L LRS E L E E L SEELRELESKRSELR RE LEE -- LRE KLAQ L E L RLEG 933
810
....*....|.
gi 1972711383 806 IKELEERIEAQ 816
Cdd:TIGR02168 934 LEVRIDNLQER 944
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
498-819
1.35e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 58.79
E-value: 1.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 498 L R F R Q L TM E YQA L QRAYA LL Q - EQVGGT L DAERETR E Q L Q AE VQRAQ A RIED LE KA L A E QGQDMK wi E EKQA L YRRNQ E L 576
Cdd:COG1196 213 E R Y R E L KE E LKE L EAELL LL K l RELEAE L EELEAEL E E L E AE LEELE A ELAE LE AE L E E LRLELE -- E LELE L EEAQA E E 290
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 577 V E KIKQMETE E ARLRHEVQDA R DQN E L LE FRIL EL E E R E R kspaisfhhtpfvdgksplqvyc E A E GVTDIVVAELMKKL 656
Cdd:COG1196 291 Y E LLAELARL E QDIARLEERR R ELE E R LE ELEE EL A E L E E ----------------------- E L E ELEEELEELEEELE 347
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 657 DILGDNA vsnltn E EQVVVIQ A RTV L TL AE KW L QQI EE TEAA L QRKMVDLESEKELFSK Q KGY L D E ELDYRKQA L DQANK 736
Cdd:COG1196 348 EAEEELE ------ E AEAELAE A EEA L LE AE AE L AEA EE ELEE L AEELLEALRAAAELAA Q LEE L E E AEEALLER L ERLEE 421
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 737 HIL ELE AM L YDALQQ E AGAKV A ELLSE EE REK L KVAV E Q w KRQVMS EL R E RD A QILRERM ELL QLAQQRIKE L EERI EA Q 816
Cdd:COG1196 422 ELE ELE EA L AELEEE E EEEEE A LEEAA EE EAE L EEEE E A - LLELLA EL L E EA A LLEAALA ELL EELAEAAAR L LLLL EA E 500
...
gi 1972711383 817 KRQ 819
Cdd:COG1196 501 ADY 503
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-616
4.79e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 56.87
E-value: 4.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 26 ED L R A K L TDIQIELQQEKSKVSKV E R E KNQELRQVR E H E QHKTAVL L T EL KTK L H E EK m K EL QAVRET l LRQHE AEL L R V 105
Cdd:COG1196 223 KE L E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAE L E EL RLE L E E LE - L EL EEAQAE - EYELL AEL A R L 300
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 106 IKIKDNENQ R LQA L LSA L rdggpekvktvlls E AK EE AKKGF E V E KVKMQQ E IS EL KGAKRQV EE A L TLVIQADKIKAAE 185
Cdd:COG1196 301 EQDIARLEE R RRE L EER L -------------- E EL EE ELAEL E E E LEELEE E LE EL EEELEEA EE E L EEAEAELAEAEEA 366
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 186 irsvyhlh QE E ITRIKK E C E R E IRR L M EE IKFKD RA VFV L ERE L GVQAGHAQR L QLQK E A L D E Q L SQVR EA DRH pgsprr 265
Cdd:COG1196 367 -------- LL E AEAELA E A E E E LEE L A EE LLEAL RA AAE L AAQ L EELEEAEEA L LERL E R L E E E L EELE EA LAE ------ 432
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 266 elphaagagdasdhsgspql D E KDARRFQLKIA E LSAIIRK LE DRNAL L S E ERN ELL KRVREA E SQYKP LL DKNKRLSRK 345
Cdd:COG1196 433 -------------------- L E EEEEEEEEALE E AAEEEAE LE EEEEA L L E LLA ELL EEAALL E AALAE LL EELAEAAAR 492
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 346 NED L SH A LRRM E NK L KF V T qeni EMRQR AG IIRRPSSLND L DQSQDER E VDFLK - L QIVE Q QNLIDELSKTLETAG Y V K S 424
Cdd:COG1196 493 LLL L LE A EADY E GF L EG V K ---- AALLL AG LRGLAGAVAV L IGVEAAY E AALEA a L AAAL Q NIVVEDDEVAAAAIE Y L K A 568
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 425 - VLE R DKL L RFR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSVS Y Q - T D RTDQTPCTPDDDLEEGMAKEETEL R F R Q 502
Cdd:COG1196 569 a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y V l G D TLLGRTLVAARLEAALRRAVTLAG R L R E 648
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 503 L T M E YQALQRAYA L LQEQVGGT L D A ER E TREQ L QAEVQ R AQARIED LE K AL AEQGQDMKWIE E KQALYRRNQELV E KIKQ 582
Cdd:COG1196 649 V T L E GEGGSAGGS L TGGSRREL L A A LL E AEAE L EELAE R LAEEELE LE E AL LAEEEEERELA E AEEERLEEELEE E ALEE 728
570 580 590
....*....|....*....|....*....|....
gi 1972711383 583 METE E ARLRH E VQDARDQNELL E FRILEL E ERER 616
Cdd:COG1196 729 QLEA E REELL E ELLEEEELLEE E ALEELP E PPDL 762
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
492-819
6.59e-07
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 53.40
E-value: 6.59e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 492 AK EE TE L RFRQ L TM E YQAL Q RAYAL L QEQVG --- GTLDAER E T R EQ L QAEVQRAQARIED LE KA L A E QGQD mkw I EE KQA 568
Cdd:COG1196 268 EL EE LR L ELEE L EL E LEEA Q AEEYE L LAELA rle QDIARLE E R R RE L EERLEELEEELAE LE EE L E E LEEE --- L EE LEE 344
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 569 LYRRNQ E LV E KIKQMET E EARLRH E VQDARDQN E LLEFRIL E LEERERKS paisfhhtpfvdgksplqvyc E AE GVTDIV 648
Cdd:COG1196 345 ELEEAE E EL E EAEAELA E AEEALL E AEAELAEA E EELEELA E ELLEALRA --------------------- A AE LAAQLE 403
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 649 VA E LMKKLDILGDNAVSNLTN E EQVVVIQARTVLTLA E KW L QQIE E T EA A L QRKMVD L ESEKELFSKQKGY L DEE L DYRK 728
Cdd:COG1196 404 EL E EAEEALLERLERLEEELE E LEEALAELEEEEEEE E EA L EEAA E E EA E L EEEEEA L LELLAELLEEAAL L EAA L AELL 483
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 729 QA L DQ A NKHI L E L EAMLY D ALQQEA G A K V A E LL SEEEREKLK VAV EQWK rqvms E LRERD A QILRERME L LQLAQQRIKE 808
Cdd:COG1196 484 EE L AE A AARL L L L LEAEA D YEGFLE G V K A A L LL AGLRGLAGA VAV LIGV ----- E AAYEA A LEAALAAA L QNIVVEDDEV 558
330
....*....|.
gi 1972711383 809 LEER IE AQ K RQ 819
Cdd:COG1196 559 AAAA IE YL K AA 569
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
45-815
1.28e-05
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 48.91
E-value: 1.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 45 KVSKVER EK N Q E L RQV R EHEQHKTAVL lt E L KTKLH E EKMK EL QAVR E T L L RQ H EA e LL R VIKIKDN E NQR L QALL S A L R 124
Cdd:TIGR02169 188 RLDLIID EK R Q Q L ERL R REREKAERYQ -- A L LKEKR E YEGY EL LKEK E A L E RQ K EA - IE R QLASLEE E LEK L TEEI S E L E 264
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 125 DGGP E KVK tv LL S E AKEEA K KGF E V E KVKMQQE I S EL KG ---- AK R QVE E ALTLVIQ A DK i KA A EIRSVYHLHQE EI TRI 200
Cdd:TIGR02169 265 KRLE E IEQ -- LL E E LNKKI K DLG E E E QLRVKEK I G EL EA eias LE R SIA E KERELED A EE - RL A KLEAEIDKLLA EI EEL 341
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 201 KK E C E R E IR R --- L M EE IKFKDRAVFV L ER EL GVQAGHAQRLQLQKEALD E Q L SQV - RE ADRHPGSPR R EL phaagagda 276
Cdd:TIGR02169 342 ER E I E E E RK R rdk L T EE YAELKEELED L RA EL EEVDKEFAETRDELKDYR E K L EKL k RE INELKRELD R LQ --------- 412
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 277 sdhsgspqlde KDAR R FQLKI A E L S A I I RKL E DRNAL L S EE RNELLKRVREA E SQYKP L LDKNKRLSRKNE DL SHALR R M 356
Cdd:TIGR02169 413 ----------- EELQ R LSEEL A D L N A A I AGI E AKINE L E EE KEDKALEIKKQ E WKLEQ L AADLSKYEQELY DL KEEYD R V 481
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 357 E NK L KFVTQ E NI E MRQR A GIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTL E T A G ------- Y V KSVLERD 429
Cdd:TIGR02169 482 E KE L SKLQR E LA E AEAQ A RASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAI E V A A gnrlnnv V V EDDAVAK 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 430 KLLRFR K Q RK ---------- KM AKLPKPVVVETFF G YDEE A ---- SLESDGSSVSYQTDRTDQTP ctpd D D L E EG mak EE 495
Cdd:TIGR02169 562 EAIELL K R RK agratflpln KM RDERRDLSILSED G VIGF A vdlv EFDPKYEPAFKYVFGDTLVV ---- E D I E AA --- RR 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 496 TELRF R QL T M E YQALQRAY A L lqeq V GG TLDAERETREQLQ -- AE V QR AQA R I E D L EKA L AEQGQDMKW IE ek QA L YRRN 573
Cdd:TIGR02169 635 LMGKY R MV T L E GELFEKSG A M ---- T GG SRAPRGGILFSRS ep AE L QR LRE R L E G L KRE L SSLQSELRR IE -- NR L DELS 708
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 574 QEL VEKIKQMETE E ARLRHEV Q DARDQN E L LE FRILE L EER E RKSPAI sfhhtpfvdg KS P L Q vyc E A E GVTDIVVAE L M 653
Cdd:TIGR02169 709 QEL SDASRKIGEI E KEIEQLE Q EEEKLK E R LE ELEED L SSL E QEIENV ---------- KS E L K --- E L E ARIEELEED L H 775
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 654 K KLDI L G D NAVSNLTNEEQVVVIQARTVLTLAEKWLQQIE E T E AA L Q R KMVD --- LE S E KELFSK Q KGY L D E ELDYRKQA 730
Cdd:TIGR02169 776 K LEEA L N D LEARLSHSRIPEIQAELSKLEEEVSRIEARLR E I E QK L N R LTLE key LE K E IQELQE Q RID L K E QIKSIEKE 855
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 731 LDQA N KHIL ELE AM L -- YD A LQQEAGAKVAE L LS E EEREKLKVAVEQW K RQVMSELR E RDAQI L R E RMEL L QLAQQRIK E 808
Cdd:TIGR02169 856 IENL N GKKE ELE EE L ee LE A ALRDLESRLGD L KK E RDELEAQLRELER K IEELEAQI E KKRKR L S E LKAK L EALEEELS E 935
....*..
gi 1972711383 809 L E ERIEA 815
Cdd:TIGR02169 936 I E DPKGE 942
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
284-821
4.19e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 47.24
E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 284 Q L D E KD A RRFQ LK IA EL S A IIRK LE DRNAL L SE E RN EL LKRVR E A E SQYKP L LDKNKR L SRKN E DLSHALRRMENK L kfv 363
Cdd:COG1196 221 E L K E LE A ELLL LK LR EL E A ELEE LE AELEE L EA E LE EL EAELA E L E AELEE L RLELEE L ELEL E EAQAEEYELLAE L --- 297
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 364 tq ENI E MRQRAGII RR PSSLND L DQSQD E REV df L KLQIV E QQNLID EL SKT LE T A gyvksvlerdk LLRFRKQRKKM A K 443
Cdd:COG1196 298 -- ARL E QDIARLEE RR RELEER L EELEE E LAE -- L EEELE E LEEELE EL EEE LE E A ----------- EEELEEAEAEL A E 362
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 444 L pkpvvvetffgyd EEA S LE SDGSSVSYQTDRTDQT pctp DDD LE EGM A KE E TELRFRQ L TMEYQ AL QRAYAL L Q E QVGG 523
Cdd:COG1196 363 A ------------- EEA L LE AEAELAEAEEELEELA ---- EEL LE ALR A AA E LAAQLEE L EEAEE AL LERLER L E E ELEE 425
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 524 TLD A ER E TR E QLQA E VQRAQARI E DLEKALA E QGQDMKWIE E KQALYRRNQELVEKIKQMET E E A RLRHEVQD A RDQN E L 603
Cdd:COG1196 426 LEE A LA E LE E EEEE E EEALEEAA E EEAELEE E EEALLELLA E LLEEAALLEAALAELLEELA E A A ARLLLLLE A EADY E G 505
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 604 LEFRILELEERERKSPAISFHHTPFVDGKSP ------- L QVYCEAEG V T D IV VA E -------------------- LMKKL 656
Cdd:COG1196 506 FLEGVKAALLLAGLRGLAGAVAVLIGVEAAY eaaleaa L AAALQNIV V E D DE VA A aaieylkaakagratflpld KIRAR 585
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 657 DI L GDNAVSNLTN --------------------- EEQVVVIQARTV L TL A EKWLQQIEETEAALQRKMVDLESEKE L FSK 715
Cdd:COG1196 586 AA L AAALARGAIG aavdlvasdlreadaryyvlg DTLLGRTLVAAR L EA A LRRAVTLAGRLREVTLEGEGGSAGGS L TGG 665
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 716 QKGY L DEE L DYRKQA L DQANKHIL E L E AM L YD AL QQ E AGAKVAELLS EEER EKLKVAV E Q w KRQVMSEL RE RDAQI L R E R 795
Cdd:COG1196 666 SRRE L LAA L LEAEAE L EELAERLA E E E LE L EE AL LA E EEEERELAEA EEER LEEELEE E A - LEEQLEAE RE ELLEE L L E E 744
570 580
....*....|....*....|....*.
gi 1972711383 796 M ELL QLAQQRIKELEERI E AQK R QIK 821
Cdd:COG1196 745 E ELL EEEALEELPEPPDL E ELE R ELE 770
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
9-591
7.41e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 46.47
E-value: 7.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 9 RAKGDKAEA L AALQ A AN E DL R AK L TDIQI EL QQ E K skvskverekn Q EL RQVR E HEQHKTAV L LT EL KTK lh EE KMK E LQ 88
Cdd:COG1196 291 YELLAELAR L EQDI A RL E ER R RE L EERLE EL EE E L ----------- A EL EEEL E ELEEELEE L EE EL EEA -- EE ELE E AE 357
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 89 A VRETLLRQHEAELLRVIKIKDNENQRLQA LL S ALR dggp EKVKTVLLS E AK EEA KKGFEVEKVKMQQ E IS EL KG A KRQV 168
Cdd:COG1196 358 A ELAEAEEALLEAEAELAEAEEELEELAEE LL E ALR ---- AAAELAAQL E EL EEA EEALLERLERLEE E LE EL EE A LAEL 433
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 169 EE ALTLVIQ A DKIK A A E irsvyhlh QE E ITRIKKECEREIRR L M EE IKFKDR A VFV L ER EL GVQ A GHAQR L QLQKEALDE 248
Cdd:COG1196 434 EE EEEEEEE A LEEA A E E -------- EA E LEEEEEALLELLAE L L EE AALLEA A LAE L LE EL AEA A ARLLL L LEAEADYEG 505
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 249 Q L SQ V RE A DRHP G SPRRELPH A AGA G D asdhsgspqldek D A RRFQLKI A E L S A IIRKLEDRNALLSEERN E L LK RVREA 328
Cdd:COG1196 506 F L EG V KA A LLLA G LRGLAGAV A VLI G V ------------- E A AYEAALE A A L A A ALQNIVVEDDEVAAAAI E Y LK AAKAG 572
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 329 ESQYK PL LDKNK R LSRKNEDLSH A LRRMENKLKFVTQ E NIEMRQRA G IIRRPSS L NDLDQSQDE R EVDF L KLQIV E QQNL 408
Cdd:COG1196 573 RATFL PL DKIRA R AALAAALARG A IGAAVDLVASDLR E ADARYYVL G DTLLGRT L VAARLEAAL R RAVT L AGRLR E VTLE 652
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 409 IDEL S KTLETA G YVKSV L ERDK L LRFRKQRKKMAK L pkpvvvetffg YD EE AS LE SDGSSVSYQTDRTDQ tpc TPDDD LE 488
Cdd:COG1196 653 GEGG S AGGSLT G GSRRE L LAAL L EAEAELEELAER L ----------- AE EE LE LE EALLAEEEEERELAE --- AEEER LE 718
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 489 E GMAK E ET E LRFRQLTM E YQALQRAYAL L Q E QVGGTLDA E RETR E Q L QA E VQ R AQAR IE D L EK -- A LA eqgqdmkw IEE K 566
Cdd:COG1196 719 E ELEE E AL E EQLEAERE E LLEELLEEEE L L E EEALEELP E PPDL E E L ER E LE R LERE IE A L GP vn L LA -------- IEE Y 790
570 580
....*....|....*....|....*
gi 1972711383 567 QA L YR R NQE L V E KIKQM E TEEAR L R 591
Cdd:COG1196 791 EE L EE R YDF L S E QREDL E EARET L E 815
YhaN
COG4717 Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
486-820
4.13e-04
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain]
Cd Length: 641
Bit Score: 43.99
E-value: 4.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 486 D L E E GMA K E E TE L RFRQ L TM E YQ AL QRAY A L L Q E QVG g T L DAER E TREQ L QA E VQRAQ A RIED L EKA L A E QGQDMKWIE E 565
Cdd:COG4717 113 E L R E ELE K L E KL L QLLP L YQ E LE AL EAEL A E L P E RLE - E L EERL E ELRE L EE E LEELE A ELAE L QEE L E E LLEQLSLAT E 191
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 566 KQA -- L YRRNQ EL VEKIKQM E T E EARLRH E VQDARDQN E L LE FRILELEER ER KSP A ISF hh TPFVDGKSP L QVYCEAEG 643
Cdd:COG4717 192 EEL qd L AEELE EL QQRLAEL E E E LEEAQE E LEELEEEL E Q LE NELEAAALE ER LKE A RLL -- LLIAAALLA L LGLGGSLL 269
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 644 VTDIVV A ELMKKLDI L GDNAVSN L TN E EQVVVIQ A RTVLT L AEKWLQQI EE T E AA L QRKMVDLESEK E LFSKQKGYLD E E 723
Cdd:COG4717 270 SLILTI A GVLFLVLG L LALLFLL L AR E KASLGKE A EELQA L PALEELEE EE L E EL L AALGLPPDLSP E ELLELLDRIE E L 349
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 724 LDYRKQ A LDQANKHI LE LEAMLYD AL QQ EAG AKVA E L L SE ----- EE REK LK VAV E QWKR Q VMSE L R E R ---- D A QILR E 794
Cdd:COG4717 350 QELLRE A EELEEELQ LE ELEQEIA AL LA EAG VEDE E E L RA aleqa EE YQE LK EEL E ELEE Q LEEL L G E L eell E A LDEE E 429
330 340
....*....|....*....|....*.
gi 1972711383 795 RM E L L QLAQQRIK ELEE RI E AQKRQI 820
Cdd:COG4717 430 LE E E L EELEEELE ELEE EL E ELREEL 455
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
26-256
1.19e-03
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 42.06
E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 26 EDLR A K L TDI Q I E LQQEKSKVSKVER E KNQE L R Q VREH E Q hkt AVLLTELKTKLH E EKMKE L Q A V retl L RQH E A E LLRV 105
Cdd:COG4942 23 AEAE A E L EQL Q Q E IAELEKELAALKK E EKAL L K Q LAAL E R --- RIAALARRIRAL E QELAA L E A E ---- L AEL E K E IAEL 95
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 106 IKIKDNENQR L QA LL S AL - R D G GPEKVKTV L LS E AKEE A kkgfevek V KMQ Q EISE L KG A K R QVE E A L TLVIQADKIKA A 184
Cdd:COG4942 96 RAELEAQKEE L AE LL R AL y R L G RQPPLALL L SP E DFLD A -------- V RRL Q YLKY L AP A R R EQA E E L RADLAELAALR A 167
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1972711383 185 E IRS vyhl HQE E ITRIKK E C E R E IRR L MEEIKFKDRAVFV LE R EL GVQ A GHAQR LQ LQK E A L DEQLSQVREA 256
Cdd:COG4942 168 E LEA ---- ERA E LEALLA E L E E E RAA L EALKAERQKLLAR LE K EL AEL A AELAE LQ QEA E E L EALIARLEAE 235
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
493-817
1.49e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 42.35
E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 493 K E ET EL RFRQ L TMEYQA L QRAYAL LQE Q vggt L DAER E TR E Q L Q AE V Q RAQARI E D L EKALA E QG qdmkwi EE KQA L YRR 572
Cdd:TIGR02168 220 A E LR EL ELAL L VLRLEE L REELEE LQE E ---- L KEAE E EL E E L T AE L Q ELEEKL E E L RLEVS E LE ------ EE IEE L QKE 289
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 573 NQE L VEK I KQM E TEEAR LR HEVQDARD Q N E L LE FRIL ELE ERERKSPAIS fhh TPFVDGKSP L QVYC E AE gvtdivv AEL 652
Cdd:TIGR02168 290 LYA L ANE I SRL E QQKQI LR ERLANLER Q L E E LE AQLE ELE SKLDELAEEL --- AELEEKLEE L KEEL E SL ------- EAE 359
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 653 MKK L DILGDNAV S N L TNE E QVVVIQART V LT L aekw LQ QI EETEAALQ R kmvd LE SEK E LFSKQKGY L DE E LDYRKQA L D 732
Cdd:TIGR02168 360 LEE L EAELEELE S R L EEL E EQLETLRSK V AQ L ---- EL QI ASLNNEIE R ---- LE ARL E RLEDRRER L QQ E IEELLKK L E 431
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 733 Q A NKHI L EL E AMLYDALQQ E AGAKVAE L LSEE E REKLKVAVEQWKRQ vmse LR ER DAQI L RE R MEL L QLA Q QRIKELE E R 812
Cdd:TIGR02168 432 E A ELKE L QA E LEELEEELE E LQEELER L EEAL E ELREELEEAEQALD ---- AA ER ELAQ L QA R LDS L ERL Q ENLEGFS E G 507
....*
gi 1972711383 813 IE A QK 817
Cdd:TIGR02168 508 VK A LL 512
PTZ00121
PTZ00121 MAEBL; Provisional
38-599
1.72e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.05
E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 38 E LQQEKSKVS K V E R E K N Q E LRQVR E ----- H EQHKT A VLLT E LKT K LH E E K MK E LQAVRETLLRQH E AELLRVI K I K DN E 112
Cdd:PTZ00121 1234 E AKKDAEEAK K A E E E R N N E EIRKF E earma H FARRQ A AIKA E EAR K AD E L K KA E EKKKADEAKKAE E KKKADEA K K K AE E 1313
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 113 NQRLQALLSALRDG gpe K V K TVLLSEAK EEAKK GF E VE K VKMQQEIS E LKG A KRQ v E EA LTLVIQAD K I KA AEIRSVYH l 192
Cdd:PTZ00121 1314 AKKADEAKKKAEEA --- K K K ADAAKKKA EEAKK AA E AA K AEAEAAAD E AEA A EEK - A EA AEKKKEEA K K KA DAAKKKAE - 1388
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 193 HQEEITRI KK EC E r E IRRLME E I K FKDR A VFVLER ----- E LGVQ A GH A QRLQLQKEAL DE QLSQVR EA DRHPGSPRR -- 265
Cdd:PTZ00121 1389 EKKKADEA KK KA E - E DKKKAD E L K KAAA A KKKADE akkka E EKKK A DE A KKKAEEAKKA DE AKKKAE EA KKAEEAKKK ae 1467
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 266 E LPH A AG A GDASDHSGSPQLDE K D A RRFQL K IA E LSAIIRKLEDRNALLSE E RNELLKRVRE AE SQY K PLLD K NKRLSR K 345
Cdd:PTZ00121 1468 E AKK A DE A KKKAEEAKKADEAK K K A EEAKK K AD E AKKAAEAKKKADEAKKA E EAKKADEAKK AE EAK K ADEA K KAEEKK K 1547
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 346 NED L SH A -- L RRM E N K L K f VTQENIEMRQRAGII R RPS sln DLDQSQDE R EVDFL KL QIV E QQNLID E LS K TL E TA gyvk 423
Cdd:PTZ00121 1548 ADE L KK A ee L KKA E E K K K - AEEAKKAEEDKNMAL R KAE --- EAKKAEEA R IEEVM KL YEE E KKMKAE E AK K AE E AK ---- 1619
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 424 sv LERDK L LRFRKQR KK MAK L P K PVVV E T ff GYD EE ASLESDGSSVSYQTDRTDQ tpc TP D DDLE E GMA K E E TELRFRQL 503
Cdd:PTZ00121 1620 -- IKAEE L KKAEEEK KK VEQ L K K KEAE E K -- KKA EE LKKAEEENKIKAAEEAKKA --- EE D KKKA E EAK K A E EDEKKAAE 1692
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 504 TMEYQ A LQRAY A llq E QVGGTLDA E RETR E Q L QAEVQRAQARI E DLE K ala E QGQ D M K WI EE kqal YRRNQ E LVE KI KQM 583
Cdd:PTZ00121 1693 ALKKE A EEAKK A --- E ELKKKEAE E KKKA E E L KKAEEENKIKA E EAK K --- E AEE D K K KA EE ---- AKKDE E EKK KI AHL 1762
570
....*....|....*.
gi 1972711383 584 ET EE ARLRH E VQDARD 599
Cdd:PTZ00121 1763 KK EE EKKAE E IRKEKE 1778
COG2433
COG2433 Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
525-613
1.89e-03
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain]
Cd Length: 644
Bit Score: 41.77
E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 525 L DA E R E TREQ L QAE V Q R AQ A RI E D LE KA L A E QGQDMKWI E EKQALY R RNQELV ---- EK I KQMET E EA RL RH E VQDA R DQ 600
Cdd:COG2433 408 L TE E E E EIRR L EEQ V E R LE A EV E E LE AE L E E KDERIERL E RELSEA R SEERRE irkd RE I SRLDR E IE RL ER E LEEE R ER 487
90
....*....|...
gi 1972711383 601 N E L L EFRILE L E E 613
Cdd:COG2433 488 I E E L KRKLER L K E 500
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
521-772
3.99e-03
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 40.52
E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 521 VGGTLD A ERETREQLQ AE VQRA Q AR I ED LEK A LA EQGQDM K WIEEK - Q AL Y RR NQE L VEK I KQM E T E E A R L RH E VQDARD 599
Cdd:COG4942 11 LALAAA A QADAAAEAE AE LEQL Q QE I AE LEK E LA ALKKEE K ALLKQ l A AL E RR IAA L ARR I RAL E Q E L A A L EA E LAELEK 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 600 QNEL L EFRILELE E RERKSPAISFHH tpfv DGKS PL QVYCEA E GVT D ivvaelmkkldilgdn AV SN L TNEEQVVVIQAR 679
Cdd:COG4942 91 EIAE L RAELEAQK E ELAELLRALYRL ---- GRQP PL ALLLSP E DFL D ---------------- AV RR L QYLKYLAPARRE 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 680 TVLT L AEK w L QQIEETE A A L QRKMVD LE SEKELFSKQKGY L DEELDY R KQA L DQAN K HIL EL E A M L YDAL Q QEA -- G A KV 757
Cdd:COG4942 151 QAEE L RAD - L AELAALR A E L EAERAE LE ALLAELEEERAA L EALKAE R QKL L ARLE K ELA EL A A E L AELQ Q EAE el E A LI 229
250
....*....|....*
gi 1972711383 758 A E L LS E EEREKLKVA 772
Cdd:COG4942 230 A R L EA E AAAAAERTP 244
PTZ00121
PTZ00121 MAEBL; Provisional
50-617
6.08e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 40.51
E-value: 6.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 50 E RE K NQEL R QVREHEQHKTAVLLT E LKTKLHEE K MKELQAVR E T ll RQHEA E LLRVIKIKD NE NQ R lqalls ALRDGGPE 129
Cdd:PTZ00121 1192 E LR K AEDA R KAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE E A -- KKDAE E AKKAEEERN NE EI R ------ KFEEARMA 1263
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 130 KVKTVLLSEAK EEA K K GF E VE K VKMQQEIS E L K G A -- K RQVE EA ltlviqad K I KA A E IRSVYHL h QEEITRI KK ECE r E 207
Cdd:PTZ00121 1264 HFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee K KKAD EA -------- K K KA E E AKKADEA - KKKAEEA KK KAD - A 1333
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 208 IRRLM EE I K FKDR A VFVLERELGVQ A GH A QRLQLQK E ALD E QLSQVRE A DRHPGSPRRELPH A AGAGD a S D HSGSPQ L DE 287
Cdd:PTZ00121 1334 AKKKA EE A K KAAE A AKAEAEAAADE A EA A EEKAEAA E KKK E EAKKKAD A AKKKAEEKKKADE A KKKAE - E D KKKADE L KK 1412
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 288 KD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRVRE AE SQY K PLLD K N K RLSR K NE D LSHALRRMEN K LKFVTQEN 367
Cdd:PTZ00121 1413 AA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K AEEA K KA D EAKKKAEEAK K ADEAKKKA 1492
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 368 I E MRQR A GIIRRPSS ---- LNDLDQSQDEREV D fl KLQIV E QQNLI DE LS K T -------- L ET A GYV K SVL E RD K LLRFR 435
Cdd:PTZ00121 1493 E E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K A eekkkade L KK A EEL K KAE E KK K AEEAK 1570
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 436 K -- QR K K MA -------- K LPKPVVV E TFFG Y D EE ASLES dgssvsyqtdrtdqtpctpdddl EE GMAK EE TELRFRQ L TM 505
Cdd:PTZ00121 1571 K ae ED K N MA lrkaeeak K AEEARIE E VMKL Y E EE KKMKA ----------------------- EE AKKA EE AKIKAEE L KK 1627
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972711383 506 EYQALQRAYA L LQEQVGGTLD AE RETREQLQAEVQR A Q - A RIEDLE K AL AE QGQDMKWI E E K -- Q AL YRRNQ E L -- V E KI 580
Cdd:PTZ00121 1628 AEEEKKKVEQ L KKKEAEEKKK AE ELKKAEEENKIKA A E e A KKAEED K KK AE EAKKAEED E K K aa E AL KKEAE E A kk A E EL 1707
570 580 590
....*....|....*....|....*....|....*..
gi 1972711383 581 K QM E T EE ARLRH E VQD A RDQ N ELLEFRILELE E RER K 617
Cdd:PTZ00121 1708 K KK E A EE KKKAE E LKK A EEE N KIKAEEAKKEA E EDK K 1744
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
