|
Name |
Accession |
Description |
Interval |
E-value |
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
47-272 |
1.57e-37 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 142.79 E-value: 1.57e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 47 KSDERLLQAVENNDAPRVAALIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYG 126
Cdd:COG0666 52 ALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 127 HPQCLKQLLQASCVVDVVDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAA 206
Cdd:COG0666 132 NLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGAD 211
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1988312898 207 ANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEAAQR 272
Cdd:COG0666 212 VNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLL 277
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
47-293 |
1.41e-35 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 137.39 E-value: 1.41e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 47 KSDERLLQAVENNDAPRVAALIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYG 126
Cdd:COG0666 19 LLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNG 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 127 HPQCLKQLLQASCVVDVVDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAA 206
Cdd:COG0666 99 DLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGAD 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 207 ANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEAAQRPSPPSALTEDDSGE 286
Cdd:COG0666 179 VNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLL 258
|
....*..
gi 1988312898 287 ASSQNSM 293
Cdd:COG0666 259 AAAAGAA 265
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
52-251 |
2.85e-29 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 118.90 E-value: 2.85e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 52 LLQAVENNDAPRVAALIArKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCL 131
Cdd:COG0666 91 LHAAARNGDLEIVKLLLE-AGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIV 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 132 KQLLQASCVVDVVDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQD 211
Cdd:COG0666 170 KLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKD 249
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1988312898 212 LQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAA 251
Cdd:COG0666 250 KDGLTALLLAAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
64-269 |
3.53e-26 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 110.04 E-value: 3.53e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 64 VAALIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDV 143
Cdd:COG0666 3 LLLLLLLLLLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 144 VDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACE 223
Cdd:COG0666 83 KDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAA 162
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1988312898 224 GASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEA 269
Cdd:COG0666 163 NGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEA 208
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
324-1100 |
1.59e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 101.67 E-value: 1.59e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 324 EEIVRLRQERGRLLQKIRGLEQHKERRQQespeasSLHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERE 403
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRE------RLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 404 NTSYDVTTLQDEEGELPDLPGAevllSRQLSPSAQEHLASLQEQVAVLTRQNQELMEKVQILENfEKDETQMEVEALAEV 483
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEE----LEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED-RRERLQQEIEELLKK 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 484 IPLALYDSLRAEFDQLRRQHAEALQALRQQETREVPREEGAACGESEVAGATAtkngpthmELNGSVApetKVNGAETID 563
Cdd:TIGR02168 430 LEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER--------ELAQLQA---RLDSLERLQ 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 564 EEAAGDETMEARTMEAEATGAEATGAEATGAKVTEtkptgaevremettEEEANMETkptgaqatdtettgVEAMGVEAT 643
Cdd:TIGR02168 499 ENLEGFSEGVKALLKNQSGLSGILGVLSELISVDE--------------GYEAAIEA--------------ALGGRLQAV 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 644 KTKAEEAEMQAYgvgAGQAEPPVTGTTNMEATGSRATGMESTGVSATGVENPGVEATVPGISAGPILHPGAAEASEKLQV 723
Cdd:TIGR02168 551 VVENLNAAKKAI---AFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLV 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 724 eletrIRGLEEALRQREREAAAELE-----AALGKC-----EAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQ 793
Cdd:TIGR02168 628 -----VDDLDNALELAKKLRPGYRIvtldgDLVRPGgvitgGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAE 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 794 AREDLRDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAE 873
Cdd:TIGR02168 703 LRKELEELEEELEQLRKE---LEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 874 LGRARDAAEARVAELPAACEEARQGLAELREasealrqsvvpasEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAE 953
Cdd:TIGR02168 780 AEAEIEELEAQIEQLKEELKALREALDELRA-------------ELTLLNEEAANLRERLESLERRIAATERRLEDLEEQ 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 954 LERERvcsvalsehERIVGtLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTE 1033
Cdd:TIGR02168 847 IEELS---------EDIES-LAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRE 916
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1988312898 1034 AERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQE 1100
Cdd:TIGR02168 917 LEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
119-211 |
2.32e-20 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 86.71 E-value: 2.32e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 119 LHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAAAGGCLSCSEVLCSfKAHLNPQDrSGATPLIIAAQMCHTDLCR 198
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE-HADVNLKD-NGRTALHYAARSGHLEIVK 78
|
90
....*....|...
gi 1988312898 199 LLLQQGAAANDQD 211
Cdd:pfam12796 79 LLLEKGADINVKD 91
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
793-1130 |
1.86e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 94.62 E-value: 1.86e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 793 QAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAA 872
Cdd:COG1196 219 KEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 873 ELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVvpASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRA 952
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL--EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 953 ELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRT 1032
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1033 EAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALY 1112
Cdd:COG1196 457 EEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAY 536
|
330
....*....|....*...
gi 1988312898 1113 RSHLLYAIQGQMDEDVQR 1130
Cdd:COG1196 537 EAALEAALAAALQNIVVE 554
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
86-178 |
3.40e-17 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 77.85 E-value: 3.40e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 86 FHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQaSCVVDVVDsSGWTALHHAAAGGCLSCSE 165
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLE-HADVNLKD-NGRTALHYAARSGHLEIVK 78
|
90
....*....|...
gi 1988312898 166 VLCSFKAHLNPQD 178
Cdd:pfam12796 79 LLLEKGADINVKD 91
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
827-1119 |
1.57e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.99 E-value: 1.57e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 827 EEARGLRAELAQREeaRLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREAS 906
Cdd:COG1196 213 ERYRELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 907 EALRQSVV-PASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVcsvALSEHERIVGTLQANVAQLEGQL 985
Cdd:COG1196 291 YELLAELArLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEE---ELEEAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 986 EELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEV 1065
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1066 FNLKEALKEQPAALATPEVEALR------DQVKDLQQQLQEAARDHSSVVALYRSHLLYA 1119
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEeaalleAALAELLEELAEAAARLLLLLEAEADYEGFL 507
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
837-1101 |
4.25e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.95 E-value: 4.25e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 837 AQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsvvpa 916
Cdd:TIGR02168 666 AKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEA----- 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 917 sEHRRLQEealelrgRAASLEQEVVATGKEAARLRAELERERVcsvALSEHERIVGTLQANVAQLEGQLEELGRRHEKTS 996
Cdd:TIGR02168 741 -EVEQLEE-------RIAQLSKELTELEAEIEELEERLEEAEE---ELAEAEAEIEELEAQIEQLKEELKALREALDELR 809
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 997 AEVFQVQREAL-------FMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLK 1069
Cdd:TIGR02168 810 AELTLLNEEAAnlrerleSLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
250 260 270
....*....|....*....|....*....|..
gi 1988312898 1070 EALKEQPAALATpEVEALRDQVKDLQQQLQEA 1101
Cdd:TIGR02168 890 ALLRSELEELSE-ELRELESKRSELRRELEEL 920
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
758-1097 |
8.03e-15 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 79.70 E-value: 8.03e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 758 EAEAGRLRERVREAEGSGASGGGGGDTTQL----RAALEQAREDLRDRDSRLRELeaasacLDEARASRLLAEEEARGLR 833
Cdd:PRK02224 275 EELAEEVRDLRERLEELEEERDDLLAEAGLddadAEAVEARREELEDRDEELRDR------LEECRVAAQAHNEEAESLR 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 834 AELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSV 913
Cdd:PRK02224 349 EDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRERE 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 914 VPASEHRRLQEEALElrgraasleqevvatgkEAARLRAE----------LERERVCsvALSEHERIVGTLQANVAQLEG 983
Cdd:PRK02224 429 AELEATLRTARERVE-----------------EAEALLEAgkcpecgqpvEGSPHVE--TIEEDRERVEELEAELEDLEE 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 984 QLEELGRRHEKTSAEVfQVQREALFMKSERHAAEAQLATAE-------QQLRGLRTEA-----------ERARQAQSRAQ 1045
Cdd:PRK02224 490 EVEEVEERLERAEDLV-EAEDRIERLEERREDLEELIAERRetieekrERAEELRERAaeleaeaeekrEAAAEAEEEAE 568
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1988312898 1046 EALDKAKEKDKKITELSKEVFNLkEALKEQPAALA--TPEVEALRDQVKDLQQQ 1097
Cdd:PRK02224 569 EAREEVAELNSKLAELKERIESL-ERIRTLLAAIAdaEDEIERLREKREALAEL 621
|
|
| PHA02875 |
PHA02875 |
ankyrin repeat protein; Provisional |
67-242 |
1.40e-13 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165206 [Multi-domain] Cd Length: 413 Bit Score: 74.26 E-value: 1.40e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 67 LIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGS---NVMSADGAgyNALHLAAKYGHPQCLKQLLQASCVVDV 143
Cdd:PHA02875 53 LLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKfadDVFYKDGM--TPLHLATILKKLDIMKLLIARGADPDI 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 144 VDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALM-LAC 222
Cdd:PHA02875 131 PNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALcYAI 210
|
170 180
....*....|....*....|
gi 1988312898 223 EGASPETVEVLLQGGAQPGI 242
Cdd:PHA02875 211 ENNKIDIVRLFIKRGADCNI 230
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
783-1108 |
3.70e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.33 E-value: 3.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 783 DTTQLRAALEQAREDL----RDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLA 858
Cdd:TIGR02169 668 FSRSEPAELQRLRERLeglkRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 859 taratgeqqrtaaaELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPA------SEHRRLQEEALELRGR 932
Cdd:TIGR02169 748 --------------SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSripeiqAELSKLEEEVSRIEAR 813
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 933 AASLEQEVVATGKEAARLRAELERERVCSVALSEHERivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSE 1012
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIK---SIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKE 890
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1013 RHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEkdkkitelskevfNLKEALKEQPAALATPEVEALRDQVK 1092
Cdd:TIGR02169 891 RDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE-------------ELSEIEDPKGEDEEIPEEELSLEDVQ 957
|
330
....*....|....*.
gi 1988312898 1093 DLQQQLQEAARDHSSV 1108
Cdd:TIGR02169 958 AELQRVEEEIRALEPV 973
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
322-909 |
1.21e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.66 E-value: 1.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 322 AYEEIVRLRQERGRLLQKIRGLEQHKERRQQESPEASSLHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENE 401
Cdd:COG1196 217 ELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 402 RENTSYDVTTLQDEEGELPDlpgAEVLLSRQLSpSAQEHLASLQEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALA 481
Cdd:COG1196 297 LARLEQDIARLEERRRELEE---RLEELEEELA-ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEA 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 482 EVIP-LALYDSLRAEFDQLRRQHAEALQALRQQETREVPREEGAACGESEVAGATATKNgpthmELNGSVAPETKVNGAE 560
Cdd:COG1196 373 ELAEaEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALA-----ELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 561 TIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTETkpTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAMGV 640
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL--AEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGA 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 641 EATKTKAEEAEMQAYGVGAGQAEPPVTGTTNMEATGSRATGMESTGVSATgvenpgveatvpgISAGPILHPGAAEASEK 720
Cdd:COG1196 526 VAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAT-------------FLPLDKIRARAALAAAL 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 721 LQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRD 800
Cdd:COG1196 593 ARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 801 RDSRLRELEAASAclDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDA 880
Cdd:COG1196 673 ALLEAEAELEELA--ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE 750
|
570 580
....*....|....*....|....*....
gi 1988312898 881 AEARVAELPAACEEARQGLAELREASEAL 909
Cdd:COG1196 751 EALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
52-145 |
2.37e-12 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 63.98 E-value: 2.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 52 LLQAVENNDAPRVAALIaRKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSnvMSADGAGYNALHLAAKYGHPQCL 131
Cdd:pfam12796 1 LHLAAKNGNLELVKLLL-ENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHAD--VNLKDNGRTALHYAARSGHLEIV 77
|
90
....*....|....
gi 1988312898 132 KQLLQASCVVDVVD 145
Cdd:pfam12796 78 KLLLEKGADINVKD 91
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
79-238 |
3.10e-12 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 71.05 E-value: 3.10e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 79 DPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAAAG 158
Cdd:PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA 601
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 159 GCLSCSEVLCSFKAHLNPQdrSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGA 238
Cdd:PLN03192 602 KHHKIFRILYHFASISDPH--AAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGA 679
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
757-1100 |
3.41e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 71.33 E-value: 3.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 757 AEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRdRDSRLRELEAASACLDEARASRLLAEEEARglRAEL 836
Cdd:PTZ00121 1092 ATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEAR-KAEDARKAEEARKAEDAKRVEIARKAEDAR--KAEE 1168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 837 AQR-EEAR-LEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVV 914
Cdd:PTZ00121 1169 ARKaEDAKkAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEE 1248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 915 PASEHRRLQEEAlelrgRAASLEQEVVATGKEAARLRAEL----ERERVCSVALSEHERivgtlqaNVAQLEGQLEELGR 990
Cdd:PTZ00121 1249 RNNEEIRKFEEA-----RMAHFARRQAAIKAEEARKADELkkaeEKKKADEAKKAEEKK-------KADEAKKKAEEAKK 1316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 991 RHE-KTSAEVFQVQREALFMKSE--RHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFN 1067
Cdd:PTZ00121 1317 ADEaKKKAEEAKKKADAAKKKAEeaKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEA 1396
|
330 340 350
....*....|....*....|....*....|...
gi 1988312898 1068 LKEALKEQPAALATPEVEALRDQVKDLQQQLQE 1100
Cdd:PTZ00121 1397 KKKAEEDKKKADELKKAAAAKKKADEAKKKAEE 1429
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
62-221 |
5.24e-12 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 69.67 E-value: 5.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 62 PRVAALIARKGLVPTKLDPEGKSAFHlAAMRGAASCLEV---MIAHGSNVMSADGAGYNALHLAAKYGHP--QCLKQLLQ 136
Cdd:PHA03095 132 PKVIRLLLRKGADVNALDLYGMTPLA-VLLKSRNANVELlrlLIDAGADVYAVDDRFRSLLHHHLQSFKPraRIVRELIR 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 137 ASCVVDVVDSSGWTALHHAAAGGclSCSEVLCSF----KAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDL 212
Cdd:PHA03095 211 AGCDPAATDMLGNTPLHSMATGS--SCKRSLVLPlliaGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSS 288
|
....*....
gi 1988312898 213 QGRTALMLA 221
Cdd:PHA03095 289 DGNTPLSLM 297
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
714-1127 |
8.99e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 8.99e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 714 AAEASEKLQVELETRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQ 793
Cdd:COG1196 342 LEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEE 421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 794 AREDLRDRDSRLRELEAASACLDEARASRLLAEEEArgLRAELAQREEARLEQSRELEVLREQLAT-ARATGEQQRTAAA 872
Cdd:COG1196 422 ELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE--EEALLELLAELLEEAALLEAALAELLEElAEAAARLLLLLEA 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 873 ELGRARDAAEARVAELPAACEEARQGLAELREASEALRQsVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRA 952
Cdd:COG1196 500 EADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEA-ALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 953 ELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREAL----FMKSERHAAEAQLATAEQQLR 1028
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEaalrRAVTLAGRLREVTLEGEGGSA 658
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1029 GLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSV 1108
Cdd:COG1196 659 GGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELL 738
|
410
....*....|....*....
gi 1988312898 1109 VALYRSHLLYAIQGQMDED 1127
Cdd:COG1196 739 EELLEEEELLEEEALEELP 757
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
365-958 |
1.42e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.20 E-value: 1.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 365 RQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELpdlpGAEVLLSRQLSPSAQEHLASL 444
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEA----QAEEYELLAELARLEQDIARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 445 QEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALAEViplalyDSLRAEFDQLRRQHAEALQALRQQETREVPREEGA 524
Cdd:COG1196 308 EERRRELEERLEELEEELAELEEELEELEEELEELEEEL------EEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 525 ACGESEVAGATATkngpthmelngsvapETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTETKPTGA 604
Cdd:COG1196 382 EELAEELLEALRA---------------AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 605 EVREMETTEEEANMETKP---TGAQATDTETTGVEAMGVEATKTKAEEAEMQAYGVGAGQAEppvtgttnmeATGSRATG 681
Cdd:COG1196 447 AAEEEAELEEEEEALLELlaeLLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE----------GVKAALLL 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 682 MESTGVSATGVENPGVEATVPgisagPILHPGAAEASEKLQVELETRIRGLEEALRQREREAAAELEAalgkceAAEAEA 761
Cdd:COG1196 517 AGLRGLAGAVAVLIGVEAAYE-----AALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPL------DKIRAR 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 762 GRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREE 841
Cdd:COG1196 586 AALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGG 665
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 842 ARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAElpaaceEARQGLAELREASEALRQSVVPASEHRR 921
Cdd:COG1196 666 SRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE------AEEERLEEELEEEALEEQLEAEREELLE 739
|
570 580 590
....*....|....*....|....*....|....*..
gi 1988312898 922 LQEEALELRGRAASLEQEVVATGKEAARLRAELERER 958
Cdd:COG1196 740 ELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
790-1023 |
5.59e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 67.25 E-value: 5.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 790 ALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQsrELEVLREQLATARAtgeqqrt 869
Cdd:COG4913 239 RAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEA--ELEELRAELARLEA------- 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 870 AAAELGRARDAAEARVAELPAACEEA-RQGLAELREASEALRQsvvpasEHRRLQEEALELRGRAASLEQEVVATGKEAA 948
Cdd:COG4913 310 ELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLER------ELEERERRRARLEALLAALGLPLPASAEEFA 383
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1988312898 949 RLRAELERervcsvALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATA 1023
Cdd:COG4913 384 ALRAEAAA------LLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEA 452
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
755-1101 |
6.13e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 67.09 E-value: 6.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 755 EAAEAEAGRLRERVREAEgsgasgggggdttQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRA 834
Cdd:PTZ00121 1174 DAKKAEAARKAEEVRKAE-------------ELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAE 1240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 835 ELAQREEAR-LEQSRELEVLREQLATAR--ATGEQQRTAAAELGRA---RDAAEARVAELPAACEEARQGLAELREASEA 908
Cdd:PTZ00121 1241 EAKKAEEERnNEEIRKFEEARMAHFARRqaAIKAEEARKADELKKAeekKKADEAKKAEEKKKADEAKKKAEEAKKADEA 1320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 909 LRQS---------VVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSV-ALSEHERIVGTLQANV 978
Cdd:PTZ00121 1321 KKKAeeakkkadaAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAkKKAEEKKKADEAKKKA 1400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 979 AQLEGQLEELGRRHE--------KTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRG--LRTEAERARQAQS------ 1042
Cdd:PTZ00121 1401 EEDKKKADELKKAAAakkkadeaKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAeeAKKKAEEAKKADEakkkae 1480
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1988312898 1043 ---RAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEA 1101
Cdd:PTZ00121 1481 eakKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA 1542
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
713-1093 |
6.67e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 67.09 E-value: 6.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 713 GAAEASEKLQVELETRIRGLEEALRQREREAAAEleaalgkcEAAEAEAGRLRERVREAEGSGASGGGggdttqlRAALE 792
Cdd:PTZ00121 1098 GKAEEAKKTETGKAEEARKAEEAKKKAEDARKAE--------EARKAEDARKAEEARKAEDAKRVEIA-------RKAED 1162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 793 QAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARglRAELAQR--EEARLEQSRELEVLREQLATARAtgEQQRta 870
Cdd:PTZ00121 1163 ARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDAR--KAEAARKaeEERKAEEARKAEDAKKAEAVKKA--EEAK-- 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 871 aaelgraRDAAEARVAELPAACEEARQgLAELREASEALRQSVVPASEHRRLQE--EALELRGRAASLEQEVVATGKEAA 948
Cdd:PTZ00121 1237 -------KDAEEAKKAEEERNNEEIRK-FEEARMAHFARRQAAIKAEEARKADElkKAEEKKKADEAKKAEEKKKADEAK 1308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 949 RlRAELERERvcsvalSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLR 1028
Cdd:PTZ00121 1309 K-KAEEAKKA------DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKAD 1381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1988312898 1029 GLRTEAERARqaqsRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKD 1093
Cdd:PTZ00121 1382 AAKKKAEEKK----KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
834-1144 |
9.58e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 9.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 834 AELAQREEARLEQSRELE--VLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALrq 911
Cdd:TIGR02168 209 AEKAERYKELKAELRELElaLLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL-- 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 912 svvpasehrrlQEEALELRGRAASLEQEVVATGKEAARLRAELERervCSVALSEHERIVGTLQANVAQLEGQLEELGRR 991
Cdd:TIGR02168 287 -----------QKELYALANEISRLEQQKQILRERLANLERQLEE---LEAQLEELESKLDELAEELAELEEKLEELKEE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 992 HEKTSAEVfqvqrealfmkserHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEK----DKKITELSKEVFN 1067
Cdd:TIGR02168 353 LESLEAEL--------------EELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEierlEARLERLEDRRER 418
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1988312898 1068 LKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVAlyrshLLYAIQGQMDEDVQRILSQILQMQRLQAQ 1144
Cdd:TIGR02168 419 LQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE-----ALEELREELEEAEQALDAAERELAQLQAR 490
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
185-266 |
1.55e-10 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 58.59 E-value: 1.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 185 LIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDalGQDAAHYGALAGDKLILH 264
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLKDN--GRTALHYAARSGHLEIVK 78
|
..
gi 1988312898 265 LL 266
Cdd:pfam12796 79 LL 80
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
501-1109 |
2.41e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 65.16 E-value: 2.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 501 RQHAEALQALRQQETREVPREEGAACGESEVAGATATKNGPTHMELNGSVAPETKVNGAETIDEEAAGDEtmEARTMEAE 580
Cdd:PTZ00121 1212 RKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAD--ELKKAEEK 1289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 581 ATGAEATGAEATgAKVTETKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAmgvEATKTKAEEAEMQAygvgAG 660
Cdd:PTZ00121 1290 KKADEAKKAEEK-KKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAA---EAAKAEAEAAADEA----EA 1361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 661 QAEPPVTGTTNMEATGSRATGMESTGVSATGVENPGVEATVPGISAGPIlhpGAAEASEKLQVELETR---IRGLEEALR 737
Cdd:PTZ00121 1362 AEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADEL---KKAAAAKKKADEAKKKaeeKKKADEAKK 1438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 738 QREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR---EDLRDRDSRLRELEAASAC 814
Cdd:PTZ00121 1439 KAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKkkaDEAKKAAEAKKKADEAKKA 1518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 815 LDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLRE-----QLATARATGEQQRTAAAELGRARDAAEARVAELP 889
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKaeekkKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVM 1598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 890 AACEEARQGLAE-LREASEALrqsvVPASEHRRLQEEALELRGRAASLEQEVvatgKEAARLRAELERERVCSVAL---S 965
Cdd:PTZ00121 1599 KLYEEEKKMKAEeAKKAEEAK----IKAEELKKAEEEKKKVEQLKKKEAEEK----KKAEELKKAEEENKIKAAEEakkA 1670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 966 EHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREAlfmKSERHAAEaQLATAEQQLRGLRTEAERARQAQSRAQ 1045
Cdd:PTZ00121 1671 EEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKE---AEEKKKAE-ELKKAEEENKIKAEEAKKEAEEDKKKA 1746
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1988312898 1046 EALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVV 1109
Cdd:PTZ00121 1747 EEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANI 1810
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
330-1101 |
3.13e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.78 E-value: 3.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 330 RQERGRLLQKIRGLEQHKERRQQESPEASSLHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENtsydv 409
Cdd:PTZ00121 1177 KAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNN----- 1251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 410 ttlqdEEGELPDLPGAEVLLSRQLSPSAQEhlaslqeqvavlTRQNQEL--MEKVQILENFEKDETQMEVEAL---AEVI 484
Cdd:PTZ00121 1252 -----EEIRKFEEARMAHFARRQAAIKAEE------------ARKADELkkAEEKKKADEAKKAEEKKKADEAkkkAEEA 1314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 485 PLAlyDSLRAEFDQLRRQhAEALQalRQQETREVPREEGAACGESEVAGATATKNGPTHMELNGSVApETKVNGAETIDE 564
Cdd:PTZ00121 1315 KKA--DEAKKKAEEAKKK-ADAAK--KKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA-KKKADAAKKKAE 1388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 565 EAAGDETMEARTMEAEATGAEATGAEATGAKVTETKPTGAEVREMETTEEEANMETKptgaqATDTETTGVEAMGVEATK 644
Cdd:PTZ00121 1389 EKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK-----ADEAKKKAEEAKKAEEAK 1463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 645 TKAEEAEmqaygvgagQAEppvtgttNMEATGSRATGMESTGVSATGVENPGVEATvpgisagpilhpGAAEASEKLQve 724
Cdd:PTZ00121 1464 KKAEEAK---------KAD-------EAKKKAEEAKKADEAKKKAEEAKKKADEAK------------KAAEAKKKAD-- 1513
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 725 letRIRGLEEALRQREREAAAeleaalgkcEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAalEQAREDLRDRDSR 804
Cdd:PTZ00121 1514 ---EAKKAEEAKKADEAKKAE---------EAKKADEAKKAEEKKKADELKKAEELKKAEEKKKA--EEAKKAEEDKNMA 1579
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 805 LRELEAASAcLDEARASRL--LAEEEARGLRAELAQREEARL--EQSRELEVLREQLATARATGEQQRTAAAELGRARDA 880
Cdd:PTZ00121 1580 LRKAEEAKK-AEEARIEEVmkLYEEEKKMKAEEAKKAEEAKIkaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEE 1658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 881 AEARVAELPAACEEARQGLAELREASEALRQSvvpASEHRRLQEEALELRGRAASLEQEVvatgKEAARLRAELERERVc 960
Cdd:PTZ00121 1659 NKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKA---AEALKKEAEEAKKAEELKKKEAEEK----KKAEELKKAEEENKI- 1730
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 961 svalseherivgtlqaNVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLR-GLRTEAERARQ 1039
Cdd:PTZ00121 1731 ----------------KAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEeELDEEDEKRRM 1794
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1988312898 1040 aqsraqealdkakEKDKKITELSKEVFNLKEALKEQPAALATP---EVEALRDQVKDLQQQLQEA 1101
Cdd:PTZ00121 1795 -------------EVDKKIKDIFDNFANIIEGGKEGNLVINDSkemEDSAIKEVADSKNMQLEEA 1846
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
70-235 |
2.08e-09 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 61.81 E-value: 2.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 70 RKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDvvDSSGW 149
Cdd:PLN03192 546 KAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISD--PHAAG 623
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 150 TALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQgrtalmlacEGASPET 229
Cdd:PLN03192 624 DLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTD---------DDFSPTE 694
|
....*.
gi 1988312898 230 VEVLLQ 235
Cdd:PLN03192 695 LRELLQ 700
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
722-1144 |
3.12e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.47 E-value: 3.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 722 QVELETRIRGLEEALRQREREAaaeleaalGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDR 801
Cdd:COG4913 250 QIELLEPIRELAERYAAARERL--------AELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 802 DSRLRELEAASACLDEARASRLlaEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAE----LGRA 877
Cdd:COG4913 322 REELDELEAQIRGNGGDRLEQL--EREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAAlleaLEEE 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 878 RDAAEARVAELPAACEEARQGLAELREASEAL--RQSVVPASEHRRLQ-----------------------------EEA 926
Cdd:COG4913 400 LEALEEALAEAEAALRDLRRELRELEAEIASLerRKSNIPARLLALRDalaealgldeaelpfvgelievrpeeerwRGA 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 927 LE--LRGRAASLeqeVVATGKEAA------------RLRAELERERVCSVALS--EHERIVGTLQ--------------- 975
Cdd:COG4913 480 IErvLGGFALTL---LVPPEHYAAalrwvnrlhlrgRLVYERVRTGLPDPERPrlDPDSLAGKLDfkphpfrawleaelg 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 976 --------ANVAQL---------EGQLEELGRRHEK------TSAEVF----QVQREALfmKSERHAAEAQLATAEQQLR 1028
Cdd:COG4913 557 rrfdyvcvDSPEELrrhpraitrAGQVKGNGTRHEKddrrriRSRYVLgfdnRAKLAAL--EAELAELEEELAEAEERLE 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1029 GLRTEaERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEqpAALATPEVEALRDQVKDLQQQLQEAARdhssv 1108
Cdd:COG4913 635 ALEAE-LDALQERREALQRLAEYSWDEIDVASAEREIAELEAELER--LDASSDDLAALEEQLEELEAELEELEE----- 706
|
490 500 510
....*....|....*....|....*....|....*.
gi 1988312898 1109 valyRSHLLYAIQGQMDEDVQRILSQILQMQRLQAQ 1144
Cdd:COG4913 707 ----ELDELKGEIGRLEKELEQAEEELDELQDRLEA 738
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
825-1081 |
1.00e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.93 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 825 AEEEARGLRAELAQREEARleqsRELEVLREQ---LATARATGEQQRTAAAELGRARDAAEARVAElpaaceEARQGLAE 901
Cdd:COG4913 223 TFEAADALVEHFDDLERAH----EALEDAREQielLEPIRELAERYAAARERLAELEYLRAALRLW------FAQRRLEL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 902 LREASEALRQsvvpasEHRRLQEEALELRGRAASLEQEVVATgkEAARLRAELERERVCSVALSEHERIVGTLQANVAQL 981
Cdd:COG4913 293 LEAELEELRA------ELARLEAELERLEARLDALREELDEL--EAQIRGNGGDRLEQLEREIERLERELEERERRRARL 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 982 EGQLEELGRRHEkTSAEVFQVQREalfmkserhAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDkakEKDKKITEL 1061
Cdd:COG4913 365 EALLAALGLPLP-ASAEEFAALRA---------EAAALLEALEEELEALEEALAEAEAALRDLRRELR---ELEAEIASL 431
|
250 260
....*....|....*....|
gi 1988312898 1062 SKEVFNLKEALKEQPAALAT 1081
Cdd:COG4913 432 ERRKSNIPARLLALRDALAE 451
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
79-249 |
1.18e-08 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 58.82 E-value: 1.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 79 DPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAAAG 158
Cdd:PHA02874 121 DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEY 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 159 GCLSCSEVLCSFKAHLNPQDRSGATPLIIAaqMCHTDLCRLLLQQGAAANDQDLQGRTALMLACE-GASPETVEVLLQGG 237
Cdd:PHA02874 201 GDYACIKLLIDHGNHIMNKCKNGFTPLHNA--IIHNRSAIELLINNASINDQDIDGSTPLHHAINpPCDIDIIDILLYHK 278
|
170
....*....|..
gi 1988312898 238 AQPGITDALGQD 249
Cdd:PHA02874 279 ADISIKDNKGEN 290
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
899-1104 |
1.66e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.91 E-value: 1.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 899 LAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEvvatgkeaaRLRAELERERVcsvALSEHERIVGTLQANV 978
Cdd:TIGR02168 195 LNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLE---------ELREELEELQE---ELKEAEEELEELTAEL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 979 AQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERA----RQAQSRAQEALDKAKEK 1054
Cdd:TIGR02168 263 QELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELeaqlEELESKLDELAEELAEL 342
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1055 DKKITELSKEVFNLKEALKEQPAalatpEVEALRDQVKDLQQQLQEAARD 1104
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEA-----ELEELESRLEELEEQLETLRSK 387
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
825-1101 |
3.09e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.23 E-value: 3.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 825 AEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEqqrtaaaelgrARDAAEARVAELPAACEEARQgLAELRE 904
Cdd:PTZ00121 1092 ATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEE-----------ARKAEDARKAEEARKAEDAKR-VEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 905 ASEALRQSVVPASEHRRLQEE---ALELRgRAASLEQEVVATGKEAARlRAELEReRVCSVALSEHERIVGTL------- 974
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAarkAEEVR-KAEELRKAEDARKAEAAR-KAEEER-KAEEARKAEDAKKAEAVkkaeeak 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 975 ----QANVAQLEGQLEELgRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRT--EAERARQAQSRAQEAl 1048
Cdd:PTZ00121 1237 kdaeEAKKAEEERNNEEI-RKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKaeEKKKADEAKKKAEEA- 1314
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1988312898 1049 DKAKEKDKKITELSKEVFNLKEALKE--QPAALATPEVEALRDQVKDLQQQLQEA 1101
Cdd:PTZ00121 1315 KKADEAKKKAEEAKKKADAAKKKAEEakKAAEAAKAEAEAAADEAEAAEEKAEAA 1369
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
98-266 |
3.45e-08 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 57.37 E-value: 3.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 98 LEVMIAHGSNVMSADGAGYNALHLAA--KYGHPQCLKQLLQASCVVDVVDSSGWTALHHAAAGGC--LSCSEVLCSFKAH 173
Cdd:PHA03100 89 VKLLLEYGANVNAPDNNGITPLLYAIskKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKidLKILKLLIDKGVD 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 174 LNPQDRsgatpliiaaqmchtdlCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHY 253
Cdd:PHA03100 169 INAKNR-----------------VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHI 231
|
170
....*....|...
gi 1988312898 254 GALAGDKLILHLL 266
Cdd:PHA03100 232 AILNNNKEIFKLL 244
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
715-1097 |
3.49e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 57.74 E-value: 3.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 715 AEASEKLQVELETRIRGLEEALRQREREAaaeleaalgkcEAAEAEAGRLRERVREAEGSGASGGGGGDTtqLRAALEQA 794
Cdd:PRK02224 309 AEAVEARREELEDRDEELRDRLEECRVAA-----------QAHNEEAESLREDADDLEERAEELREEAAE--LESELEEA 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 795 REDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQ-------- 866
Cdd:PRK02224 376 REAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAlleagkcp 455
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 867 ---QRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALEL-------RGRAASL 936
Cdd:PRK02224 456 ecgQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLeeliaerRETIEEK 535
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 937 EQEVVATGKEAARLRAELERERvcSVALSEHERIVGTLQAnVAQLEGQLEELGRRhektsaevfqvqREALFMKSERHAA 1016
Cdd:PRK02224 536 RERAEELRERAAELEAEAEEKR--EAAAEAEEEAEEAREE-VAELNSKLAELKER------------IESLERIRTLLAA 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1017 EAQLATAEQQLRglrteaERARQAQSRAQEALDKAKEKDKKITELSKEV--FNLKEALK-----EQPAALATPEVEALRD 1089
Cdd:PRK02224 601 IADAEDEIERLR------EKREALAELNDERRERLAEKRERKRELEAEFdeARIEEAREdkeraEEYLEQVEEKLDELRE 674
|
....*...
gi 1988312898 1090 QVKDLQQQ 1097
Cdd:PRK02224 675 ERDDLQAE 682
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
734-1103 |
3.52e-08 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 58.04 E-value: 3.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 734 EALRQREREAAAELeaalgkcEAAEAEAGRLRERVReaegsgasgggggdttqLRAALEQAREDLRDRDSRLRE----LE 809
Cdd:COG3096 316 EELSARESDLEQDY-------QAASDHLNLVQTALR-----------------QQEKIERYQEDLEELTERLEEqeevVE 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 810 AASACLDEARASRLLAEEEARGLRAELAQREEA-RLEQSRELEVLREQLATARAtgeQQRTAAAELgrARDAAEARVAEL 888
Cdd:COG3096 372 EAAEQLAEAEARLEAAEEEVDSLKSQLADYQQAlDVQQTRAIQYQQAVQALEKA---RALCGLPDL--TPENAEDYLAAF 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 889 PAACEEARQGLAElreaseaLRQSVVPASEHRRLQEEALEL---------RGRAASLEQEVVatgKEAARLRAELERERV 959
Cdd:COG3096 447 RAKEQQATEEVLE-------LEQKLSVADAARRQFEKAYELvckiageveRSQAWQTARELL---RRYRSQQALAQRLQQ 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 960 CSVALSEHERivgtLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAE--RA 1037
Cdd:COG3096 517 LRAQLAELEQ----RLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEqlRA 592
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1988312898 1038 RQAQSRAQE-ALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEA--LRDQVKDLQQQLQEAAR 1103
Cdd:COG3096 593 RIKELAARApAWLAAQDALERLREQSGEALADSQEVTAAMQQLLEREREAtvERDELAARKQALESQIE 661
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
798-1140 |
3.67e-08 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 58.04 E-value: 3.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 798 LRDRDSRLRELEAASAC---LDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLA---TARATGEQQRTAA 871
Cdd:PRK04863 275 MRHANERRVHLEEALELrreLYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNlvqTALRQQEKIERYQ 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 872 AELgrarDAAEARVAELPAACEEARQGLAELREASEALRQSV-------------VPASEHRRLQ--------EEALELR 930
Cdd:PRK04863 355 ADL----EELEERLEEQNEVVEEADEQQEENEARAEAAEEEVdelksqladyqqaLDVQQTRAIQyqqavqalERAKQLC 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 931 GRAA-------SLEQEVVATGKEAARLRAELERE-RVCSVALSEHE-------RIVGTLQANVAQLEGQleELGRRHEKT 995
Cdd:PRK04863 431 GLPDltadnaeDWLEEFQAKEQEATEELLSLEQKlSVAQAAHSQFEqayqlvrKIAGEVSRSEAWDVAR--ELLRRLREQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 996 SAEVFQVQrealfmkserhAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQ 1075
Cdd:PRK04863 509 RHLAEQLQ-----------QLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEA 577
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1988312898 1076 PAalatpEVEALRDQVKDLQQQLQEAARD----HSSVVALYRshlLYAIQGQMDEDVQRILSQILQMQR 1140
Cdd:PRK04863 578 RE-----RRMALRQQLEQLQARIQRLAARapawLAAQDALAR---LREQSGEEFEDSQDVTEYMQQLLE 638
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
101-155 |
3.69e-08 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 50.81 E-value: 3.69e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1988312898 101 MIAHGS-NVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHA 155
Cdd:pfam13857 1 LLEHGPiDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
115-167 |
4.48e-08 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 50.35 E-value: 4.48e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1988312898 115 GYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAAAGGCLSCSEVL 167
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
787-1102 |
7.31e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 57.00 E-value: 7.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 787 LRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEeARGLRAELAQREEARLEQ-SRELEVLREQLATARAtge 865
Cdd:PRK03918 464 IEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQ-LKELEEKLKKYNLEELEKkAEEYEKLKEKLIKLKG--- 539
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 866 QQRTAAAELGRARDAaEARVAELPAACEEARQGLAELreasealrqsvvpaseHRRLQEEAL----ELRGRAASLE---Q 938
Cdd:PRK03918 540 EIKSLKKELEKLEEL-KKKLAELEKKLDELEEELAEL----------------LKELEELGFesveELEERLKELEpfyN 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 939 EVVATGKEAARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHektSAEVFQVQREALFMKSERHAaea 1018
Cdd:PRK03918 603 EYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKY---SEEEYEELREEYLELSRELA--- 676
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1019 qlataeqqlrGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALkeqpaalatPEVEALRDQVKDLQQQL 1098
Cdd:PRK03918 677 ----------GLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKAL---------ERVEELREKVKKYKALL 737
|
....
gi 1988312898 1099 QEAA 1102
Cdd:PRK03918 738 KERA 741
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
183-234 |
9.44e-08 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 49.58 E-value: 9.44e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1988312898 183 TPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLL 234
Cdd:pfam13637 3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
717-958 |
1.33e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.08 E-value: 1.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 717 ASEKLQvELETRIRGLEEALRQREREAaaeleaalgkcEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQARE 796
Cdd:COG4913 608 NRAKLA-ALEAELAELEEELAEAEERL-----------EALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEA 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 797 DLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGR 876
Cdd:COG4913 676 ELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERF 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 877 ARDAAEARVAELPAACEEARQGL-AELREASEALRQ----------------SVVPAS------EHRRLQEEAL-ELRGR 932
Cdd:COG4913 756 AAALGDAVERELRENLEERIDALrARLNRAEEELERamrafnrewpaetadlDADLESlpeylaLLDRLEEDGLpEYEER 835
|
250 260
....*....|....*....|....*.
gi 1988312898 933 AASLEQEvvATGKEAARLRAELERER 958
Cdd:COG4913 836 FKELLNE--NSIEFVADLLSKLRRAI 859
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
148-201 |
1.48e-07 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 49.20 E-value: 1.48e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1988312898 148 GWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLL 201
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
319-1065 |
1.92e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 55.61 E-value: 1.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 319 DRDAYEEIVRLRQErgrllqkIRGLEQHKERRQQESPEASSLHI----LERQVQELQQLLVERQEEKESLGRE------- 387
Cdd:pfam12128 229 DIQAIAGIMKIRPE-------FTKLQQEFNTLESAELRLSHLHFgyksDETLIASRQEERQETSAELNQLLRTlddqwke 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 388 -VESLQSRLSLLENERENTSYDVTTLQDEEGELPDLPGAEVLLSRQLSPSAQEHLASLQEQVAVLTRQNQELMEKVQILE 466
Cdd:pfam12128 302 kRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRR 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 467 NFEKDETQMEVEALaeviplalYDSLRAEFDQLRRQHAEALQALRQQETREVPREEGAACGESEVAGATATKNGPTHMEL 546
Cdd:pfam12128 382 SKIKEQNNRDIAGI--------KDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRL 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 547 NGSVA-PETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTEtKPTGAEVREMETTEEEANMETKPTGA 625
Cdd:pfam12128 454 NQATAtPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASE-ALRQASRRLEERQSALDELELQLFPQ 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 626 QATDTETTGVEAMGVEATKTKAEEAEMqaygVGAGQAEPPVTGttnmeatgsratgmestgvsatgvENPGVEATVPGIS 705
Cdd:pfam12128 533 AGTLLHFLRKEAPDWEQSIGKVISPEL----LHRTDLDPEVWD------------------------GSVGGELNLYGVK 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 706 agpiLHPGAAEASEKLQveletrirgLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGasgggggdtT 785
Cdd:pfam12128 585 ----LDLKRIDVPEWAA---------SEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREE---------T 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 786 QLRAALEQAREDLRDRDSRLRELEAAsacLDEARASRL-LAEEEARGLRAELAQREearLEQSRELEVLREQLATARATG 864
Cdd:pfam12128 643 FARTALKNARLDLRRLFDEKQSEKDK---KNKALAERKdSANERLNSLEAQLKQLD---KKHQAWLEEQKEQKREARTEK 716
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 865 EQQRTAAAElgrARDAAEARVAELPAACEEARqglaelreasealrqsvvpASEHRRLQEE-ALELRGRAASlEQEVVAT 943
Cdd:pfam12128 717 QAYWQVVEG---ALDAQLALLKAAIAARRSGA-------------------KAELKALETWyKRDLASLGVD-PDVIAKL 773
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 944 GKEAARLRAELERERVCSVALSEHERIVGT--------LQANVAQLEGQLEELGRRHEKTSAEVfQVQREALFMksERHA 1015
Cdd:pfam12128 774 KREIRTLERKIERIAVRRQEVLRYFDWYQEtwlqrrprLATQLSNIERAISELQQQLARLIADT-KLRRAKLEM--ERKA 850
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 1988312898 1016 AEAQLATAEQQLRGLRTEAER---------ARQAQSRAQEALDKAKEKDKKITELSKEV 1065
Cdd:pfam12128 851 SEKQQVRLSENLRGLRCEMSKlatlkedanSEQAQGSIGERLAQLEDLKLKRDYLSESV 909
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
59-209 |
3.03e-07 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 54.29 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 59 NDAPRVAALIARKGLVPTKLDPEGKSAFHLAAMR--GAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQC------ 130
Cdd:PHA03100 83 TDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKksNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLkilkll 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 131 ------------LKQLLQASCVVDVVDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCR 198
Cdd:PHA03100 163 idkgvdinaknrVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFK 242
|
170
....*....|.
gi 1988312898 199 LLLQQGAAAND 209
Cdd:PHA03100 243 LLLNNGPSIKT 253
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
714-1108 |
5.52e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 5.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 714 AAEASEKLQVELETRIRGLE---EALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLR-- 788
Cdd:TIGR02168 359 ELEELEAELEELESRLEELEeqlETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKel 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 789 ----AALEQAREDLRDRDSRLRE-LEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLAtarat 863
Cdd:TIGR02168 439 qaelEELEEELEELQEELERLEEaLEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK----- 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 864 geQQRTAAAELGRARDAAEARV---AELPAACEEARQ-----GLAELREASEALRQS--------VVPASEHRRLQEEAL 927
Cdd:TIGR02168 514 --NQSGLSGILGVLSELISVDEgyeAAIEAALGGRLQavvveNLNAAKKAIAFLKQNelgrvtflPLDSIKGTEIQGNDR 591
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 928 ELR-------GRAASLEQE----------------VVATGKEAARLRAELERE------------RVCSVALSEHERIVG 972
Cdd:TIGR02168 592 EILkniegflGVAKDLVKFdpklrkalsyllggvlVVDDLDNALELAKKLRPGyrivtldgdlvrPGGVITGGSAKTNSS 671
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 973 TL--QANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDK 1050
Cdd:TIGR02168 672 ILerRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQ 751
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1988312898 1051 A----KEKDKKITELSKEVFNLKEALKEQPAalatpEVEALRDQVKDLQQQLQEAARDHSSV 1108
Cdd:TIGR02168 752 LskelTELEAEIEELEERLEEAEEELAEAEA-----EIEELEAQIEQLKEELKALREALDEL 808
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
57-253 |
7.71e-07 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 53.10 E-value: 7.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 57 ENNDAPRVAALIARKGLVPTKlDPEGKSAFHLAAMRGAASCLEV---MIAHGSNVMSADGAGYNALHLaakyghpqclkq 133
Cdd:PHA03095 23 SNVTVEEVRRLLAAGADVNFR-GEYGKTPLHLYLHYSSEKVKDIvrlLLEAGADVNAPERCGFTPLHL------------ 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 134 LLQASCVVDVVDssgwtalhhaaaggclscseVLCSFKAHLNPQDRSGATPL-IIAAQMC-HTDLCRLLLQQGAAANDQD 211
Cdd:PHA03095 90 YLYNATTLDVIK--------------------LLIKAGADVNAKDKVGRTPLhVYLSGFNiNPKVIRLLLRKGADVNALD 149
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1988312898 212 LQGRTAL--MLACEGASPETVEVLLQGGAQPGITDALGQDAAHY 253
Cdd:PHA03095 150 LYGMTPLavLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHH 193
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
790-1103 |
4.39e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 51.11 E-value: 4.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 790 ALEQAREDLRDRDSRLRELEAASA----CLDEARASRLLAEEEARGLRAELAQREEA-RLEQSRELEVLREQLATARAtg 864
Cdd:PRK04863 349 KIERYQADLEELEERLEEQNEVVEeadeQQEENEARAEAAEEEVDELKSQLADYQQAlDVQQTRAIQYQQAVQALERA-- 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 865 eQQRTAAAELgrARDAAEARVAELPAACEEARQglaELREASEALRQsvvpASEHRRLQEEALELrgraasleqevvatg 944
Cdd:PRK04863 427 -KQLCGLPDL--TADNAEDWLEEFQAKEQEATE---ELLSLEQKLSV----AQAAHSQFEQAYQL--------------- 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 945 keAARLRAELERERVCSVA---LSEHERIVgTLQANVAQLEGQLEELGRRHEKtSAEVFQVQREALfMKSERH-----AA 1016
Cdd:PRK04863 482 --VRKIAGEVSRSEAWDVArelLRRLREQR-HLAEQLQQLRMRLSELEQRLRQ-QQRAERLLAEFC-KRLGKNlddedEL 556
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1017 EAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEA---LKEQ-PAALATPEvealrdQVK 1092
Cdd:PRK04863 557 EQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDAlarLREQsGEEFEDSQ------DVT 630
|
330
....*....|.
gi 1988312898 1093 DLQQQLQEAAR 1103
Cdd:PRK04863 631 EYMQQLLERER 641
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
800-1006 |
4.48e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 4.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 800 DRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARD 879
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 880 AAEARVAE-LPAACEEARQGLAEL----REASEALRQSVVPASEHRRLQEEALELRGRAASLE---QEVVATGKEAARLR 951
Cdd:COG4942 101 AQKEELAElLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAalrAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1988312898 952 AELERERV-CSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREA 1006
Cdd:COG4942 181 AELEEERAaLEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
865-1101 |
5.92e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.40 E-value: 5.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 865 EQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASealrQSVVPASEHRRLQEEALELRGRAASLEQEVVATG 944
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKN----GLVDLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 945 KEAARLRAELERERVCSVALSEHERIvGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREalfmkseRHAAEAQLATAE 1024
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQSPVI-QQLRAQLAELEAELAELSARYTPNHPDVIALRAQ-------IAALRAQLQQEA 311
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1988312898 1025 QQ-LRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEalkeqpaalatpEVEALRDQVKDLQQQLQEA 1101
Cdd:COG3206 312 QRiLASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLER------------EVEVARELYESLLQRLEEA 377
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
67-188 |
6.64e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 49.96 E-value: 6.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 67 LIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGhpQCLKQLLQASCVVDVVDS 146
Cdd:PHA02874 175 LLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN--RSAIELLINNASINDQDI 252
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1988312898 147 SGWTALHHAAAGGC-LSCSEVLCSFKAHLNPQDRSGATPLIIA 188
Cdd:PHA02874 253 DGSTPLHHAINPPCdIDIIDILLYHKADISIKDNKGENPIDTA 295
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
84-135 |
6.79e-06 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 44.19 E-value: 6.79e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 1988312898 84 SAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLL 135
Cdd:pfam13637 3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
789-1105 |
7.19e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.15 E-value: 7.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 789 AALEQAREDLRDRDSRLRELEAASACLDEARAsRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQR 868
Cdd:COG4717 88 EEYAELQEELEELEEELEELEAELEELREELE-KLEKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 869 TAAAELGRAR-------------------------DAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQ 923
Cdd:COG4717 167 ELEAELAELQeeleelleqlslateeelqdlaeelEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLK 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 924 EEALELRGRAASLEQEVVATGKEAARLR--------------AELERERVCSVALSEHERIVGTLQANVAQLEGQLEELG 989
Cdd:COG4717 247 EARLLLLIAAALLALLGLGGSLLSLILTiagvlflvlgllalLFLLLAREKASLGKEAEELQALPALEELEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 990 RRHEKTSAEVFQVqREALFMKSERHAAEAQLATAEQQLRGLRTEAERAR---QAQSRAQEALDKAKEKDKKITELSKEVF 1066
Cdd:COG4717 327 ALGLPPDLSPEEL-LELLDRIEELQELLREAEELEEELQLEELEQEIAAllaEAGVEDEEELRAALEQAEEYQELKEELE 405
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1988312898 1067 NLKEALKEQP----AALATPEVEALRDQVKDLQQQLQEAARDH 1105
Cdd:COG4717 406 ELEEQLEELLgeleELLEALDEEELEEELEELEEELEELEEEL 448
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
320-518 |
1.19e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 320 RDAYEEIVRLRQERGRLLQKIRGLEQHKERRQQESPEASSLHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLE 399
Cdd:COG4913 647 REALQRLAEYSWDEIDVASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAE 726
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 400 NERENTSYDVTTLQDEEGELPDLPGAEVLLSRQLSPSAQEHLASLQEQVAVLTRQNQELMEK-VQILENF------EKDE 472
Cdd:COG4913 727 EELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEElERAMRAFnrewpaETAD 806
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1988312898 473 TQMEVEALAEVipLALYDSLRAefDQLRRQHAEALQALRQQETREV 518
Cdd:COG4913 807 LDADLESLPEY--LALLDRLEE--DGLPEYEERFKELLNENSIEFV 848
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
131-237 |
1.34e-05 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 49.19 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 131 LKQLLQASCVVDVVDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQ 210
Cdd:PHA02874 107 IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK 186
|
90 100
....*....|....*....|....*..
gi 1988312898 211 DLQGRTALMLACEGASPETVEVLLQGG 237
Cdd:PHA02874 187 DNNGESPLHNAAEYGDYACIKLLIDHG 213
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
82-255 |
1.62e-05 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 48.87 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 82 GKSAFHLAAMRGA-ASCLEVMIAHGSNVMSADGAGYNALH--LAAKYGHPQCLKQLLQASCVVDVVDSSGWTALH----- 153
Cdd:PHA03095 83 GFTPLHLYLYNATtLDVIKLLIKAGADVNAKDKVGRTPLHvyLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAvllks 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 154 HAAaggCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLC--RLLLQQGAAANDQDLQGRTALMLACEGASPETVE 231
Cdd:PHA03095 163 RNA---NVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARivRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSL 239
|
170 180
....*....|....*....|....*.
gi 1988312898 232 V--LLQGGAQPGITDALGQDAAHYGA 255
Cdd:PHA03095 240 VlpLLIAGISINARNRYGQTPLHYAA 265
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
787-1100 |
2.59e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.52 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 787 LRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQlataratgeq 866
Cdd:PRK03918 212 ISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEK---------- 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 867 qrtaAAELGRARDAAEARVaELPAACEEARQGLAELREASEALRQSvvpASEHRRLQEEALELRGRAASLEQEVVATGKE 946
Cdd:PRK03918 282 ----VKELKELKEKAEEYI-KLSEFYEEYLDELREIEKRLSRLEEE---INGIEERIKELEEKEERLEELKKKLKELEKR 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 947 AARLRA---ELERERVCSVALSEHERIVGTLqaNVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERhaaeAQLATA 1023
Cdd:PRK03918 354 LEELEErheLYEEAKAKKEELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITARIGELKKEI----KELKKA 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1024 EQQLRGLR----------TEAERARQAQSRAQEALDKAKEK---DKKITELSKEVFNLKEALKEQPAALAtpeVEALRDQ 1090
Cdd:PRK03918 428 IEELKKAKgkcpvcgrelTEEHRKELLEEYTAELKRIEKELkeiEEKERKLRKELRELEKVLKKESELIK---LKELAEQ 504
|
330
....*....|
gi 1988312898 1091 VKDLQQQLQE 1100
Cdd:PRK03918 505 LKELEEKLKK 514
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
801-1133 |
2.65e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.68 E-value: 2.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 801 RDSRLRELEAASACLdEARASRLLAEEEARGLRAelaqREEARLEQSReLEVLREQLATARATGE---QQRTAAAELGRA 877
Cdd:pfam12128 403 REARDRQLAVAEDDL-QALESELREQLEAGKLEF----NEEEYRLKSR-LGELKLRLNQATATPElllQLENFDERIERA 476
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 878 RDAAEARVAELPAACEEARQGLAELREASEALRQsvvpasEHRRLQeealELRGRAASLEQEVVA---TGKEAARLRAEL 954
Cdd:pfam12128 477 REEQEAANAEVERLQSELRQARKRRDQASEALRQ------ASRRLE----ERQSALDELELQLFPqagTLLHFLRKEAPD 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 955 ERERVCSVALSE-------HERIVGTLQANVAQLEGQLEELGR-RHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQ 1026
Cdd:pfam12128 547 WEQSIGKVISPEllhrtdlDPEVWDGSVGGELNLYGVKLDLKRiDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQ 626
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1027 LRGLRTEAERARQAQSRAQEALDKAKEkdkKITELSKEVFNLKEALKEQPAALATPEVEALRD----------QVKDLQQ 1096
Cdd:pfam12128 627 LVQANGELEKASREETFARTALKNARL---DLRRLFDEKQSEKDKKNKALAERKDSANERLNSleaqlkqldkKHQAWLE 703
|
330 340 350
....*....|....*....|....*....|....*..
gi 1988312898 1097 QLQEAARDHSSVVALYRSHLLYAIQGQMDEDVQRILS 1133
Cdd:pfam12128 704 EQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAA 740
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
968-1144 |
2.89e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.09 E-value: 2.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 968 ERIVGTLQANVAQLEGQLEELGRRHEKTSAEV--FQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQ 1045
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALeeFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALR 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1046 EALDKAKEKDKKITElSKEVFNLKEALKEQPAALAT---------PEVEALRDQVKDLQQQL-QEAARDHSSVVALYRSh 1115
Cdd:COG3206 247 AQLGSGPDALPELLQ-SPVIQQLRAQLAELEAELAElsarytpnhPDVIALRAQIAALRAQLqQEAQRILASLEAELEA- 324
|
170 180
....*....|....*....|....*....
gi 1988312898 1116 lLYAIQGQMDEDVQRILSQILQMQRLQAQ 1144
Cdd:COG3206 325 -LQAREASLQAQLAQLEARLAELPELEAE 352
|
|
| FUSC |
pfam04632 |
Fusaric acid resistance protein family; This family includes a conserved region found in two ... |
755-922 |
2.98e-05 |
|
Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.
Pssm-ID: 428044 [Multi-domain] Cd Length: 655 Bit Score: 48.05 E-value: 2.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 755 EAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR---EDLRDRDSRLRELEAASAcldearasRLLAEeeARG 831
Cdd:pfam04632 167 DALRLAAAALAGAPGAEAFEAARLRLAADILALEALRSHAAfesPRGRARARALRRLLARML--------ALLPR--LRS 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 832 LRAELAQREEARLEQSRELEVLREQLATARATGEQQ---------RTAAAELGRARDAAEARVAELPAACEEARQGLAEL 902
Cdd:pfam04632 237 LARLLARLRTEGAGTVPELAALLDELAAWEAALAAEalqaalaalRARLRALRPALPLDFDTAAELLARLADLLAELAEA 316
|
170 180
....*....|....*....|
gi 1988312898 903 REASEALRQSVVPASEHRRL 922
Cdd:pfam04632 317 LASCRALRHPIAQGARPARL 336
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
834-1063 |
3.10e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 3.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 834 AELAQREEARLEQ-SRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQS 912
Cdd:COG4942 19 ADAAAEAEAELEQlQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 913 VVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERErvcsvALSEHERIVGTLQANVAQLEGQLEELGRRH 992
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKY-----LAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1988312898 993 EKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSK 1063
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
50-246 |
3.20e-05 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 48.14 E-value: 3.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 50 ERLLQavennDAPRVAALIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQ 129
Cdd:PHA02876 151 ERIQQ-----DELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNID 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 130 CLKQLLQASCVVDVVDSSgwtaLHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMchTDLCRL---LLQQGAA 206
Cdd:PHA02876 226 TIKAIIDNRSNINKNDLS----LLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQA--PSLSRLvpkLLERGAD 299
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1988312898 207 ANDQDLQGRTAL-MLACEGASPETVEVLLQGGAQPGITDAL 246
Cdd:PHA02876 300 VNAKNIKGETPLyLMAKNGYDTENIRTLIMLGADVNAADRL 340
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
82-244 |
3.47e-05 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 47.95 E-value: 3.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 82 GKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHaAAGGCL 161
Cdd:PHA02878 168 GNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHI-SVGYCK 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 162 ScsevlcsfkahlnpqdrsgatpliiaaqmchTDLCRLLLQQGAAANDQD-LQGRTALMLACEgaSPETVEVLLQGGAQP 240
Cdd:PHA02878 247 D-------------------------------YDILKLLLEHGVDVNAKSyILGLTALHSSIK--SERKLKLLLEYGADI 293
|
....
gi 1988312898 241 GITD 244
Cdd:PHA02878 294 NSLN 297
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
893-1104 |
3.47e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 3.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 893 EEARQGLAELREASEALRQSVvpasehRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVcsvALSEHERIVG 972
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKEL------AALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA---ELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 973 TLQANVAQLEGQLEELGRRHEKT-----------SAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQ 1041
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1988312898 1042 SRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQQLQEAARD 1104
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAA-ELAELQQEAEELEALIARLEAE 235
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
350-488 |
4.69e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 46.88 E-value: 4.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 350 RQQESPEASSLHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGELP---DLPGAE 426
Cdd:PRK09039 45 SREISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEgraGELAQE 124
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1988312898 427 VLLSRQLSPSAQEHLASLQEQVAVLTRQNQELMEKVQILENFEKdETQMEVEALAEVIPLAL 488
Cdd:PRK09039 125 LDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDR-ESQAKIADLGRRLNVAL 185
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
788-1090 |
5.35e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 47.20 E-value: 5.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 788 RAALEQAR--EDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAEL---AQREEARLEQSRE-LEVLREQLATAR 861
Cdd:pfam07888 28 RAELLQNRleECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELesrVAELKEELRQSREkHEELEEKYKELS 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 862 ATGEQQRTAAAELGRARDAAEARV------------------AELPAACEEARQGLAELREASEALRQS----VVPASEH 919
Cdd:pfam07888 108 ASSEELSEEKDALLAQRAAHEARIreleediktltqrvlereTELERMKERAKKAGAQRKEEEAERKQLqaklQQTEEEL 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 920 RRLQEEALELRGRAASLEQEVVA--------TGKEAARLRAELERERVCSVALSEHERIVGTLQAnVAQLEGQLEELGRR 991
Cdd:pfam07888 188 RSLSKEFQELRNSLAQRDTQVLQlqdtittlTQKLTTAHRKEAENEALLEELRSLQERLNASERK-VEGLGEELSSMAAQ 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 992 HEKTSAEVFQVQREALFMKserhaaeAQLATAEQQLRglrteAERARQAQSRaqEALDKAKEKDK-KITELSKEVFNLKE 1070
Cdd:pfam07888 267 RDRTQAELHQARLQAAQLT-------LQLADASLALR-----EGRARWAQER--ETLQQSAEADKdRIEKLSAELQRLEE 332
|
330 340
....*....|....*....|
gi 1988312898 1071 ALKEQPAALATPEVEALRDQ 1090
Cdd:pfam07888 333 RLQEERMEREKLEVELGREK 352
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
783-926 |
6.76e-05 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 46.26 E-value: 6.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 783 DTTQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARA 862
Cdd:pfam00529 52 DPTDYQAALDSAEAQLAKAQAQVARLQAELDRLQALESELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRV 131
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1988312898 863 TGEQ---QRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEA 926
Cdd:pfam00529 132 LAPIggiSRESLVTAGALVAQAQANLLATVAQLDQIYVQITQSAAENQAEVRSELSGAQLQIAEAEA 198
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
736-1048 |
8.27e-05 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 46.93 E-value: 8.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 736 LRQREREAAAEleaalgkCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACL 815
Cdd:COG3903 557 LRGLLREGRRW-------LERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAAL 629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 816 DEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEA 895
Cdd:COG3903 630 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAA 709
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 896 RQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSVALSEHERIVGTLQ 975
Cdd:COG3903 710 ALAAAAAAAAAAAAAAALLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAAALAAA 789
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1988312898 976 ANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEAL 1048
Cdd:COG3903 790 AAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAALAAALAAAAAAAAAAAAAAAAAAALAAALAAAA 862
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
716-1041 |
8.34e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.98 E-value: 8.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 716 EASEKLQVELETRIRGLeealrqrereaaaeleaalgkceaAEAEAGRLRERVReaegsgasgggggdttQLRAALEQAR 795
Cdd:TIGR02169 268 EEIEQLLEELNKKIKDL------------------------GEEEQLRVKEKIG----------------ELEAEIASLE 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 796 EDLRDRDSRLRELEaasacldearasrllaeeearglrAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELG 875
Cdd:TIGR02169 308 RSIAEKERELEDAE------------------------ERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELK 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 876 RARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPA-SEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAEL 954
Cdd:TIGR02169 364 EELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELkRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEK 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 955 ErervcsvalseherivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEA 1034
Cdd:TIGR02169 444 E-----------------DKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERV 506
|
....*..
gi 1988312898 1035 ERARQAQ 1041
Cdd:TIGR02169 507 RGGRAVE 513
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
785-1100 |
8.58e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.04 E-value: 8.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 785 TQLRAALEQAREDLRDRDSRL-RELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARAT 863
Cdd:pfam15921 327 SQLRSELREAKRMYEDKIEELeKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDR 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 864 GEQQRTAAAELGRARDAAEARVAELPAACEEARqglaelreaSEALRQsvvpasehrrLQEEALELRGRAASLEQEVVAT 943
Cdd:pfam15921 407 DTGNSITIDHLRRELDDRNMEVQRLEALLKAMK---------SECQGQ----------MERQMAAIQGKNESLEKVSSLT 467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 944 gkeaARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVqrealfmkseRHAAEAQLata 1023
Cdd:pfam15921 468 ----AQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKL----------RSRVDLKL--- 530
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1988312898 1024 eQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEA--LRDQVKDLQQQLQE 1100
Cdd:pfam15921 531 -QELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKaqLEKEINDRRLELQE 608
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
320-516 |
9.55e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 9.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 320 RDAYEEIVRLRQERGRLLQkirgLEQHKERRQQESPEASSLHIL---------ERQVQELQQLLVERQEEKESLGREVES 390
Cdd:COG4913 238 ERAHEALEDAREQIELLEP----IRELAERYAAARERLAELEYLraalrlwfaQRRLELLEAELEELRAELARLEAELER 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 391 LQSRLSLLENERENtsydvttlqdeegelpdlpgaevlLSRQLSPSAQEHLASLQEQVAVLTRQNQELMEKVQILenfek 470
Cdd:COG4913 314 LEARLDALREELDE------------------------LEAQIRGNGGDRLEQLEREIERLERELEERERRRARL----- 364
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1988312898 471 detqmevEALAEVIPLALYDSlRAEFDQLRRQHAEALQALRQQETR 516
Cdd:COG4913 365 -------EALLAALGLPLPAS-AEEFAALRAEAAALLEALEEELEA 402
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
786-1107 |
1.06e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.87 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 786 QLRAALEQAREDLRDRDSRLRELeaaSACLDEARASRLLAEEEARGLRAELAQREEArLEQSRELEVLREQLATARATGE 865
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEM---ARELEELSARESDLEQDYQAASDHLNLVQTA-LRQQEKIERYQEDLEELTERLE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 866 QQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEAL-------RQSVVPASEHRRLQEEALELRGRAASLEQ 938
Cdd:COG3096 365 EQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQqtraiqyQQAVQALEKARALCGLPDLTPENAEDYLA 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 939 EVVATGKEAARLRAELE-RERVCSVALSEHERIVGTLQANVAQLEgqleelgrrhektSAEVFQVQREALFMKSERHAAE 1017
Cdd:COG3096 445 AFRAKEQQATEEVLELEqKLSVADAARRQFEKAYELVCKIAGEVE-------------RSQAWQTARELLRRYRSQQALA 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1018 AQLATAEQQLRglrtEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQQ 1097
Cdd:COG3096 512 QRLQQLRAQLA----ELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEE-QAAEAVEQRSELRQQ 586
|
330
....*....|
gi 1988312898 1098 LQEAARDHSS 1107
Cdd:COG3096 587 LEQLRARIKE 596
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
803-913 |
1.30e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 46.23 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 803 SRLR-ELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSR-ELEVLREQLATARATGEQQRTAAAELGRARDA 880
Cdd:COG0542 400 ARVRmEIDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAELRdELAELEEELEALKARWEAEKELIEEIQELKEE 479
|
90 100 110
....*....|....*....|....*....|...
gi 1988312898 881 AEARVAELPAACEEARQGLAELREASEALRQSV 913
Cdd:COG0542 480 LEQRYGKIPELEKELAELEEELAELAPLLREEV 512
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
786-1146 |
1.34e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.49 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 786 QLRAALEQAREDLRDRDS---RLRELEAASA--CLDEARASRLLAEEEAR--GLRAELAQREEARLEQSRELEVLREQLA 858
Cdd:PRK04863 517 QLRMRLSELEQRLRQQQRaerLLAEFCKRLGknLDDEDELEQLQEELEARleSLSESVSEARERRMALRQQLEQLQARIQ 596
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 859 TARATGEQQRTAAAELGRARDAAEARVAElPAACEEARQGLAE-LREASEALRQSvvpASEHRRLQEEALELRGRAASLE 937
Cdd:PRK04863 597 RLAARAPAWLAAQDALARLREQSGEEFED-SQDVTEYMQQLLErERELTVERDEL---AARKQALDEEIERLSQPGGSED 672
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 938 QE---------------------------------------VVATGKEAARLRAELE----------------RERVCSV 962
Cdd:PRK04863 673 PRlnalaerfggvllseiyddvsledapyfsalygparhaiVVPDLSDAAEQLAGLEdcpedlyliegdpdsfDDSVFSV 752
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 963 ALSEHERIVGTLQANV--------------------AQLEGQLEELGRRHEKTSAEVFQVQR--EALFMKSERHAA---- 1016
Cdd:PRK04863 753 EELEKAVVVKIADRQWrysrfpevplfgraarekriEQLRAEREELAERYATLSFDVQKLQRlhQAFSRFIGSHLAvafe 832
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1017 ---EAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEK-------------------DKKITELSKEVFNLKEA--- 1071
Cdd:PRK04863 833 adpEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGlsalnrllprlnlladetlADRVEEIREQLDEAEEAkrf 912
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1072 ----------LKEQPAALATP--EVEALRDQVKDLQQQLQEA---ARDHSSVVALyRSHLLYA----IQGQMDEDVQRIL 1132
Cdd:PRK04863 913 vqqhgnalaqLEPIVSVLQSDpeQFEQLKQDYQQAQQTQRDAkqqAFALTEVVQR-RAHFSYEdaaeMLAKNSDLNEKLR 991
|
490
....*....|....
gi 1988312898 1133 SQILQMQRLQAQGR 1146
Cdd:PRK04863 992 QRLEQAEQERTRAR 1005
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
414-647 |
1.43e-04 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 46.39 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 414 DEEGELPDLPgaEVLLSRQLSPSAQEHLASLQeqVAVLTrqnqelMEKVQILENfEKDETQMEVEALAEVIPLALY---- 489
Cdd:PLN03237 1090 DDAAEEEEEI--DVSSSSGVRGSDYDYLLSMA--IGTLT------LEKVQELCA-DRDKLNIEVEDLKKTTPKSLWlkdl 1158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 490 DSLRAEFDQLRRQHAEALQALRQQetrevprEEGAACGESEvAGATATKNGPThmelngsvAPETKVNGAETIDEEAAgD 569
Cdd:PLN03237 1159 DALEKELDKLDKEDAKAEEAREKL-------QRAAARGESG-AAKKVSRQAPK--------KPAPKKTTKKASESETT-E 1221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 570 ETMEARTMEAEATGAEA-----TGAEATGAKVTETKPTGAEVREMETTEEEANMETKPTGAQATDTETTGVEAMGVEATK 644
Cdd:PLN03237 1222 ETYGSSAMETENVAEVVkpkgrAGAKKKAPAAAKEKEEEDEILDLKDRLAAYNLDSAPAQSAKMEETVKAVPARRAAARK 1301
|
...
gi 1988312898 645 TKA 647
Cdd:PLN03237 1302 KPL 1304
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
719-1111 |
1.45e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 719 EKLQVELETRIRGLEEALRQREREAAAELeaalgKCEAAEAEAGRLRERVReaegsgasGGGGGDTTQLRAALEQAREDL 798
Cdd:COG4717 135 EALEAELAELPERLEELEERLEELRELEE-----ELEELEAELAELQEELE--------ELLEQLSLATEEELQDLAEEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 799 RDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAELaqREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRAR 878
Cdd:COG4717 202 EELQQRLAELEEE---LEEAQEELEELEEELEQLENEL--EAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIA 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 879 DAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELEREr 958
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE- 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 959 vcsvaLSEHERivgtlQANVAQLEGQLEELGRRHEKTSAEVFqvqREALFMKSERHAAEAQLATAEQQLRGLRTEAERAR 1038
Cdd:COG4717 356 -----AEELEE-----ELQLEELEQEIAALLAEAGVEDEEEL---RAALEQAEEYQELKEELEELEEQLEELLGELEELL 422
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1988312898 1039 QA------QSRAQEALDKAKEKDKKITELSKEVFNLKEALKEqpaALATPEVEALRDQVKDLQQQLQEAARDHSSVVAL 1111
Cdd:COG4717 423 EAldeeelEEELEELEEELEELEEELEELREELAELEAELEQ---LEEDGELAELLQELEELKAELRELAEEWAALKLA 498
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
719-1075 |
2.08e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.83 E-value: 2.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 719 EKLQVELE------TRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVreaegsgasGGGGGDTTQLRAALE 792
Cdd:TIGR02169 684 EGLKRELSslqselRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERL---------EELEEDLSSLEQEIE 754
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 793 QAREDLRDRDSRLRELEAASACLDEARAS--RLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTA 870
Cdd:TIGR02169 755 NVKSELKELEARIEELEEDLHKLEEALNDleARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE 834
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 871 AAELGRARDAAEARVAELPAACEEARQGLAELreasealrqsvvpASEHRRLQEEALELRGRAASLEQEVvatGKEAARL 950
Cdd:TIGR02169 835 IQELQEQRIDLKEQIKSIEKEIENLNGKKEEL-------------EEELEELEAALRDLESRLGDLKKER---DELEAQL 898
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 951 RAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRH--------EKTSAEVFQVQREALfmkserhaaeaqlat 1022
Cdd:TIGR02169 899 RELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKgedeeipeEELSLEDVQAELQRV--------------- 963
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1988312898 1023 aEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQ 1075
Cdd:TIGR02169 964 -EEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
795-913 |
2.19e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.96 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 795 REDLRDRDSRLRELEAASACLDEARAsrlLAEEEARGLRAELAQreearleqsrelevLREQLATARATGEQQRTAAAEL 874
Cdd:PRK09039 45 SREISGKDSALDRLNSQIAELADLLS---LERQGNQDLQDSVAN--------------LRASLSAAEAERSRLQALLAEL 107
|
90 100 110
....*....|....*....|....*....|....*....
gi 1988312898 875 GRARDAAEARVAELPAACEEARQGLAELREASEALRQSV 913
Cdd:PRK09039 108 AGAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQI 146
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
719-1039 |
2.56e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.11 E-value: 2.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 719 EKLQVELETRIRGLEEalRQREREAAAELEAALGKCEAAEAEAGRL-----RERVREAEGSGASGGGGGDTTQLRAALEQ 793
Cdd:pfam17380 299 ERLRQEKEEKAREVER--RRKLEEAEKARQAEMDRQAAIYAEQERMamereRELERIRQEERKRELERIRQEEIAMEISR 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 794 AREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRaelaqreearlEQSRELEVLREQLATARatgeQQRTAAAE 873
Cdd:pfam17380 377 MRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQ-----------QQKVEMEQIRAEQEEAR----QREVRRLE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 874 LGRARDAAEARVAELpaaceEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAasLEQEVvatgkeAARLRAE 953
Cdd:pfam17380 442 EERAREMERVRLEEQ-----ERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI--LEKEL------EERKQAM 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 954 LERERVCSVALSEHERivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQlaTAEQQLRGLRTE 1033
Cdd:pfam17380 509 IEEERKRKLLEKEMEE---RQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAM--EREREMMRQIVE 583
|
....*.
gi 1988312898 1034 AERARQ 1039
Cdd:pfam17380 584 SEKARA 589
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
321-513 |
2.62e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 321 DAYEEIVRLRQERGRLLQKIRGLEQHKERRQQEspeassLHILERQVQELQQLLVERQEEK--ESLGREVESLQSRLSLL 398
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAE------LDALQERREALQRLAEYSWDEIdvASAEREIAELEAELERL 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 399 enerENTSYDVTTLQDEEGELpdlpGAEVLLSRQLSPSAQEHLASLQEQVAVLTRQNQELMEKVQILENFEKDETQMEVE 478
Cdd:COG4913 681 ----DASSDDLAALEEQLEEL----EAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLE 752
|
170 180 190
....*....|....*....|....*....|....*.
gi 1988312898 479 A-LAEVIPLALYDSLRAEFDQLRRQHAEALQALRQQ 513
Cdd:COG4913 753 ErFAAALGDAVERELRENLEERIDALRARLNRAEEE 788
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
796-1113 |
2.99e-04 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 45.13 E-value: 2.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 796 EDLRDRDSrLRELEAASACLDEARASRllAEEEA---RGLRAELAQREEARLE-QSRELEVLREQLATARatgEQQRTAA 871
Cdd:pfam07111 325 QDLEHRDS-VKQLRGQVAELQEQVTSQ--SQEQAilqRALQDKAAEVEVERMSaKGLQMELSRAQEARRR---QQQQTAS 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 872 AE--LGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELrgraASLEQEVVATGKEAAR 949
Cdd:pfam07111 399 AEeqLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSNRLSYAVRKVHTIKGLMARKVAL----AQLRQESCPPPPPAPP 474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 950 LRAELERErvCSVALSEHERIVGTLQANVAQLEgqlEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLrg 1029
Cdd:pfam07111 475 VDADLSLE--LEQLREERNRLDAELQLSAHLIQ---QEVGRAREQGEAERQQLSEVAQQLEQELQRAQESLASVGQQL-- 547
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1030 lrteaERARQAQsraQEALDKAKEKDKKITElSKEVFNlkEALKEQPAALATpeveALRDQVKDLQQQLQEAARDHSSVV 1109
Cdd:pfam07111 548 -----EVARQGQ---QESTEEAASLRQELTQ-QQEIYG--QALQEKVAEVET----RLREQLSDTKRRLNEARREQAKAV 612
|
....
gi 1988312898 1110 ALYR 1113
Cdd:pfam07111 613 VSLR 616
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
152-234 |
3.12e-04 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 44.89 E-value: 3.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 152 LHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVE 231
Cdd:PTZ00322 86 LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQ 165
|
...
gi 1988312898 232 VLL 234
Cdd:PTZ00322 166 LLS 168
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
324-516 |
3.27e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 3.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 324 EEIVRLRQERGRLLQKIRGLEQH-KERRQQESPEASSLHILERQVQELQQLLVERQEEKESLGREVESLQSRLSLLENER 402
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKElAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 403 ENTSYDVTTLQDEEGELPDLPGAEVLLS--------------RQLSPSAQEHLASLQEQVAVLTRQNQELMEKVQILENF 468
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSpedfldavrrlqylKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1988312898 469 eKDETQMEVEALAEVIplALYDSLRAEFDQLRRQHAEALQALRQQETR 516
Cdd:COG4942 180 -LAELEEERAALEALK--AERQKLLARLEKELAELAAELAELQQEAEE 224
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
964-1102 |
3.75e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 3.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 964 LSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTE---------- 1033
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNkeyealqkei 98
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1988312898 1034 ---AERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATpEVEALRDQVKDLQQQLQEAA 1102
Cdd:COG1579 99 eslKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDE-ELAELEAELEELEAEREELA 169
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
975-1072 |
3.79e-04 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 44.94 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 975 QANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAErarQAQSRAQEALDKAKEK 1054
Cdd:PRK11448 141 ENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLE---QLQEKAAETSQERKQK 217
|
90
....*....|....*...
gi 1988312898 1055 DKKITELSKEVFNLKEAL 1072
Cdd:PRK11448 218 RKEITDQAAKRLELSEEE 235
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
921-1074 |
4.29e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 4.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 921 RLQE---EALELRGRAASLEQEVVATGKEAARLRAELErervcsvalsEHERIVGTLQANVAQLEGQLEELGRRHEKTSA 997
Cdd:COG1579 11 DLQEldsELDRLEHRLKELPAELAELEDELAALEARLE----------AAKTELEDLEKEIKRLELEIEEVEARIKKYEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 998 EVFQV--QREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEK-DKKITELSKEVFNLKEALKE 1074
Cdd:COG1579 81 QLGNVrnNKEYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAElEEKKAELDEELAELEAELEE 160
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
841-1100 |
5.13e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.56 E-value: 5.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 841 EARLEQ-SRELEVLREQLATARA-TGEQQRTAA----------------------AELGRARDAAEARVAELPAACEEAR 896
Cdd:COG3096 784 EKRLEElRAERDELAEQYAKASFdVQKLQRLHQafsqfvgghlavafapdpeaelAALRQRRSELERELAQHRAQEQQLR 863
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 897 QGLAELREASEALRQsVVPASEHrrLQEEALELRGRAAsleQEVVATGKEAARLRAElerervCSVALSEHERIVGTLQ- 975
Cdd:COG3096 864 QQLDQLKEQLQLLNK-LLPQANL--LADETLADRLEEL---REELDAAQEAQAFIQQ------HGKALAQLEPLVAVLQs 931
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 976 --ANVAQLEGQLEELGRRHEKTSAEVFQ----VQREALFMKSErhaAEAQLATAEQQLRGLRTEAERARQAQSRAQEALd 1049
Cdd:COG3096 932 dpEQFEQLQADYLQAKEQQRRLKQQIFAlsevVQRRPHFSYED---AVGLLGENSDLNEKLRARLEQAEEARREAREQL- 1007
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1988312898 1050 kaKEKDKKITELSKEVFNLKEALkeqpaalatpevEALRDQVKDLQQQLQE 1100
Cdd:COG3096 1008 --RQAQAQYSQYNQVLASLKSSR------------DAKQQTLQELEQELEE 1044
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
841-1100 |
5.38e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.18 E-value: 5.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 841 EARLEQ-SRELEVLREQLATARA-TGEQQRT----------------------AAAELGRARDAAEARVAELPAACEEAR 896
Cdd:PRK04863 785 EKRIEQlRAEREELAERYATLSFdVQKLQRLhqafsrfigshlavafeadpeaELRQLNRRRVELERALADHESQEQQQR 864
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 897 QGLAELREASEALR----QSVVPASEHrrLQEEALELRGRAASLEqevvatgkEAARLRAELERervcsvALSEHERIVG 972
Cdd:PRK04863 865 SQLEQAKEGLSALNrllpRLNLLADET--LADRVEEIREQLDEAE--------EAKRFVQQHGN------ALAQLEPIVS 928
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 973 TLQA---NVAQLEGQLEELGRRHEKTSAEVFQ----VQREALFMKSErhaaEAQLATAEQQLR-GLRTEAERARQAQSRA 1044
Cdd:PRK04863 929 VLQSdpeQFEQLKQDYQQAQQTQRDAKQQAFAltevVQRRAHFSYED----AAEMLAKNSDLNeKLRQRLEQAEQERTRA 1004
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1988312898 1045 QEALdkaKEKDKKITELSKEVFNLKEALkeqpaalatpevEALRDQVKDLQQQLQE 1100
Cdd:PRK04863 1005 REQL---RQAQAQLAQYNQVLASLKSSY------------DAKRQMLQELKQELQD 1045
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
784-1006 |
5.82e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.17 E-value: 5.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 784 TTQLRAALEQAREDLrdrdSRLRELEAASACLDEARAsrllaEEEARGLRAELAQREEARL---EQSRELEVLREQLATA 860
Cdd:COG3096 859 EQQLRQQLDQLKEQL----QLLNKLLPQANLLADETL-----ADRLEELREELDAAQEAQAfiqQHGKALAQLEPLVAVL 929
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 861 RATGEQQRTAAAELGRA---RDAAEAR-------VAELPA-ACEEARQGLAELREASEALRQSVVPASEHRRLQEEALE- 928
Cdd:COG3096 930 QSDPEQFEQLQADYLQAkeqQRRLKQQifalsevVQRRPHfSYEDAVGLLGENSDLNEKLRARLEQAEEARREAREQLRq 1009
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 929 --------------LRGRA-------ASLEQEVVATGKEA---ARLRAELERERVCSvALSEHERIVGTLQANVAQLEGQ 984
Cdd:COG3096 1010 aqaqysqynqvlasLKSSRdakqqtlQELEQELEELGVQAdaeAEERARIRRDELHE-ELSQNRSRRSQLEKQLTRCEAE 1088
|
250 260
....*....|....*....|..
gi 1988312898 985 LEELGRRHEKTSAEVFQVQREA 1006
Cdd:COG3096 1089 MDSLQKRLRKAERDYKQEREQV 1110
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
716-911 |
6.87e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.85 E-value: 6.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 716 EASEKLQVELETRIRGLEEALRQrereaaaeleaalgkceaAEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAR 795
Cdd:COG3206 171 EEARKALEFLEEQLPELRKELEE------------------AEAALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEAR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 796 EDLRDRDSRLRELEAASAcLDEARASRLLAEEEARGLRAELAQREEARLEQSR-------ELEVLREQLATARATGEQQ- 867
Cdd:COG3206 233 AELAEAEARLAALRAQLG-SGPDALPELLQSPVIQQLRAQLAELEAELAELSArytpnhpDVIALRAQIAALRAQLQQEa 311
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1988312898 868 RTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQ 911
Cdd:COG3206 312 QRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRR 355
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
214-266 |
7.10e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 38.79 E-value: 7.10e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 1988312898 214 GRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLL 266
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
785-1074 |
7.48e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 43.89 E-value: 7.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 785 TQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARG---------------------LRAELAQREEAR 843
Cdd:PRK10929 140 SQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAQLTALQAESAALKalvdelelaqlsannrqelarLRSELAKKRSQQ 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 844 LEQsrELEVLREQLATARatgeqQRTAAAELGRARDAAEaRVAELPAACEEArqgLAELREASEALRQSV----VPASEH 919
Cdd:PRK10929 220 LDA--YLQALRNQLNSQR-----QREAERALESTELLAE-QSGDLPKSIVAQ---FKINRELSQALNQQAqrmdLIASQQ 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 920 RRLQEEALELRgraasleqEVVATGKEAARLRAElerervcSVALSEherivgTLQANVA---------QLEGQLEELgr 990
Cdd:PRK10929 289 RQAASQTLQVR--------QALNTLREQSQWLGV-------SNALGE------ALRAQVArlpempkpqQLDTEMAQL-- 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 991 rhektsaevfQVQR---EALFmksERHAAEAQLATAEQQlrGLRTEAERARQAQSRAQEALDKA--KEKDKKITELSK-E 1064
Cdd:PRK10929 346 ----------RVQRlryEDLL---NKQPQLRQIRQADGQ--PLTAEQNRILDAQLRTQRELLNSllSGGDTLILELTKlK 410
|
330
....*....|..
gi 1988312898 1065 VFN--LKEALKE 1074
Cdd:PRK10929 411 VANsqLEDALKE 422
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
713-1104 |
9.37e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 9.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 713 GAAEASEKLQVELETRIRGLEEALRQREREAAAELeaalgKCEAAEAEAGRLRE-RVREAEGSGASGGGGGDTTQLRAAL 791
Cdd:PRK03918 252 GSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-----ELKEKAEEYIKLSEfYEEYLDELREIEKRLSRLEEEINGI 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 792 EQAREDLRDRDSRLREL---------------------EAASACLDEARA-SRLLAEEEARGLRAELAQREEARLEQSRE 849
Cdd:PRK03918 327 EERIKELEEKEERLEELkkklkelekrleeleerhelyEEAKAKKEELERlKKRLTGLTPEKLEKELEELEKAKEEIEEE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 850 LEVLREQLATARATGEQQRTAAAELGRA--------RDAAE-----------ARVAELPAACEEARQGLAELREASEALR 910
Cdd:PRK03918 407 ISKITARIGELKKEIKELKKAIEELKKAkgkcpvcgRELTEehrkelleeytAELKRIEKELKEIEEKERKLRKELRELE 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 911 QSVVPASEHRRLQEEALELRGRAASLE------------------QEVVATGKEAARLRAELERERVCSVALSEHERIVG 972
Cdd:PRK03918 487 KVLKKESELIKLKELAEQLKELEEKLKkynleelekkaeeyeklkEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLD 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 973 TLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQaqsRAQEALDKAK 1052
Cdd:PRK03918 567 ELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFE---ELAETEKRLE 643
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1988312898 1053 EKDKKITELSKEvFNLKE--ALKEQPAALATpEVEALRDQVKDLQQQLQEAARD 1104
Cdd:PRK03918 644 ELRKELEELEKK-YSEEEyeELREEYLELSR-ELAGLRAELEELEKRREEIKKT 695
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
789-1065 |
9.72e-04 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 43.14 E-value: 9.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 789 AALEQAREDLRDRDSRLRELEAAsacLDEARASRLLAEEEARGLRAELAQREEARLEQS--RELEVLREQLATARATGEQ 866
Cdd:COG0497 151 AGLEELLEEYREAYRAWRALKKE---LEELRADEAERARELDLLRFQLEELEAAALQPGeeEELEEERRRLSNAEKLREA 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 867 QRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVpasehrRLQEEALELRGRAASLEQevvatgkE 946
Cdd:COG0497 228 LQEALEALSGGEGGALDLLGQALRALERLAEYDPSLAELAERLESALI------ELEEAASELRRYLDSLEF-------D 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 947 AARLrAELErervcsvalsehERIvgtlqanvaqleGQLEELGRRHEKTSAEVFQVQREAlfmkserhAAE-AQLATAEQ 1025
Cdd:COG0497 295 PERL-EEVE------------ERL------------ALLRRLARKYGVTVEELLAYAEEL--------RAElAELENSDE 341
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1988312898 1026 QLRGLRTEAERARQAQSRAQEALDKAKEkdKKITELSKEV 1065
Cdd:COG0497 342 RLEELEAELAEAEAELLEAAEKLSAARK--KAAKKLEKAV 379
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
757-1048 |
1.07e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 43.47 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 757 AEAEAGRLRERVREAEGSGASGGGGGDTTQLRAALEQAREDLRDRDSRLRELEAASACLDEARA------SRLLAEEEAR 830
Cdd:COG3903 487 RAAARRRHADYYLALAERAAAELRGPDQLAWLARLDAEHDNLRAALRWALAHGDAELALRLAAAlapfwfLRGLLREGRR 566
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 831 GLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALR 910
Cdd:COG3903 567 WLERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAALAAAAAAAAAAAAAAAAA 646
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 911 QSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERVCSVALSEHERIVGTLQANVAQLEGQLEELGR 990
Cdd:COG3903 647 AAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAAALAAAAAAAAAAAAAAA 726
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1988312898 991 RHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEAL 1048
Cdd:COG3903 727 LLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAA 784
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
67-122 |
1.08e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 38.10 E-value: 1.08e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1988312898 67 LIARKGLVPTKLDPEGKSAFHLAAMRGAASCLEVMIAHGSNVMSADGAGYNALHLA 122
Cdd:pfam13857 1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
105-239 |
1.11e-03 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 43.13 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 105 GSNVMSADGAGYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAAAGGCLSCS-EVLCSFKAHLNPQDRSGAT 183
Cdd:PHA02876 365 GANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSvKTLIDRGANVNSKNKDLST 444
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1988312898 184 PLIIAAQM-CHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASpeTVEVLLQGGAQ 239
Cdd:PHA02876 445 PLHYACKKnCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYHG--IVNILLHYGAE 499
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
324-501 |
1.17e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.13 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 324 EEIVRLRQERGRLLQKIrgLEQHKERRQQESPEASSLHILERQVQELQQL---LVERQEEKESLGREVESLQSRLSLLEN 400
Cdd:PRK03918 189 ENIEELIKEKEKELEEV--LREINEISSELPELREELEKLEKEVKELEELkeeIEELEKELESLEGSKRKLEEKIRELEE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 401 ERENTSYDVTTLQDEEGELPDLPGAE---VLLSRQLSPSAQE------HLASLQEQVAVLTRQNQELMEKVQILENFEK- 470
Cdd:PRK03918 267 RIEELKKEIEELEEKVKELKELKEKAeeyIKLSEFYEEYLDElreiekRLSRLEEEINGIEERIKELEEKEERLEELKKk 346
|
170 180 190
....*....|....*....|....*....|..
gi 1988312898 471 -DETQMEVEALAEviPLALYDSLRAEFDQLRR 501
Cdd:PRK03918 347 lKELEKRLEELEE--RHELYEEAKAKKEELER 376
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
189-294 |
1.51e-03 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 42.58 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 189 AQMCHTDLC-----------RLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALA 257
Cdd:PTZ00322 79 AHMLTVELCqlaasgdavgaRILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEEN 158
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1988312898 258 GDKLILHLLQEAAQRP------SPPSALTEDDSGEASSQNSMS 294
Cdd:PTZ00322 159 GFREVVQLLSRHSQCHfelganAKPDSFTGKPPSLEDSPISSH 201
|
|
| ANK |
smart00248 |
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ... |
115-143 |
1.56e-03 |
|
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Pssm-ID: 197603 [Multi-domain] Cd Length: 30 Bit Score: 37.18 E-value: 1.56e-03
10 20
....*....|....*....|....*....
gi 1988312898 115 GYNALHLAAKYGHPQCLKQLLQASCVVDV 143
Cdd:smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADINA 30
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
131-270 |
1.64e-03 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 42.17 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 131 LKQLLQASCVVDVVD-SSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAAND 209
Cdd:PHA02878 150 TKLLLSYGADINMKDrHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDA 229
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1988312898 210 QDLQGRTALMLACEGA-SPETVEVLLQGGAQPGITDA-LGQDAAHYGALAGDKLILhLLQEAA 270
Cdd:PHA02878 230 RDKCGNTPLHISVGYCkDYDILKLLLEHGVDVNAKSYiLGLTALHSSIKSERKLKL-LLEYGA 291
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
141-188 |
1.92e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 37.33 E-value: 1.92e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1988312898 141 VDVVDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNPQDRSGATPLIIA 188
Cdd:pfam13857 9 LNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
964-1104 |
2.53e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 964 LSEHERIVGTLQANVAQLEgQLEELGRRHEKTSAE------------VFQVQREALFMKSERHAAEAQLATAEQQLRGLR 1031
Cdd:COG4913 237 LERAHEALEDAREQIELLE-PIRELAERYAAARERlaeleylraalrLWFAQRRLELLEAELEELRAELARLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1032 TEAERARQAQSRAQEALDKAkeKDKKITELSKEVFNLKEALKEQ----------------PAALATPEVEALRDQVKDLQ 1095
Cdd:COG4913 316 ARLDALREELDELEAQIRGN--GGDRLEQLEREIERLERELEERerrrarleallaalglPLPASAEEFAALRAEAAALL 393
|
....*....
gi 1988312898 1096 QQLQEAARD 1104
Cdd:COG4913 394 EALEEELEA 402
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
712-917 |
2.69e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 712 PGAAEASEKLQVELEtRIRGLEEALRQREREAAAELEAALGKCEAAEAEAGRLRERVREAEGSGASGGGGGDTTQ----- 786
Cdd:COG4942 16 AAQADAAAEAEAELE-QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEkeiae 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 787 LRAALEQAREDLRD---------RDSRLRELEAASACLDEARASRLLAE---------EEARGLRAELAQREEARLEQSR 848
Cdd:COG4942 95 LRAELEAQKEELAEllralyrlgRQPPLALLLSPEDFLDAVRRLQYLKYlaparreqaEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1988312898 849 ELEVLREQLATARATGEQQR----TAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPAS 917
Cdd:COG4942 175 ELEALLAELEEERAALEALKaerqKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
783-1089 |
2.75e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 783 DTTQLRAALEQAREDLrdrdSRLRELEAASACLDEARASRLLAEEEARGLRAELA----QREEARLEQ-SRELEVLR--- 854
Cdd:PRK04863 859 QEQQQRSQLEQAKEGL----SALNRLLPRLNLLADETLADRVEEIREQLDEAEEAkrfvQQHGNALAQlEPIVSVLQsdp 934
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 855 EQLATARATGEQ----QRTAAAelgRARDAAE--ARVAELpaACEEARQGLAELREASEALRQSVVPASEHRRLQEEalE 928
Cdd:PRK04863 935 EQFEQLKQDYQQaqqtQRDAKQ---QAFALTEvvQRRAHF--SYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRARE--Q 1007
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 929 LRGRAASLEQevvatgkeAARLRAELErervcsvalSEHErivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALF 1008
Cdd:PRK04863 1008 LRQAQAQLAQ--------YNQVLASLK---------SSYD----AKRQMLQELKQELQDLGVPADSGAEERARARRDELH 1066
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1009 M-----KSERHAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPE 1083
Cdd:PRK04863 1067 ArlsanRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAGWCAVLRLVKDNGVERRLHRRELAYLSADE 1146
|
....*.
gi 1988312898 1084 VEALRD 1089
Cdd:PRK04863 1147 LRSMSD 1152
|
|
| PHA02875 |
PHA02875 |
ankyrin repeat protein; Provisional |
115-273 |
2.75e-03 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165206 [Multi-domain] Cd Length: 413 Bit Score: 41.52 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 115 GYNALHLAAKYGHPQCLKQLLQASCVVDVVDSSGWTALHHAAAGGCLSCSEVLCSFKAHLNpqD---RSGATPLIIAAQM 191
Cdd:PHA02875 35 GISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFAD--DvfyKDGMTPLHLATIL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 192 CHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEAAQ 271
Cdd:PHA02875 113 KKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGA 192
|
..
gi 1988312898 272 RP 273
Cdd:PHA02875 193 NI 194
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
115-145 |
3.18e-03 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 36.11 E-value: 3.18e-03
10 20 30
....*....|....*....|....*....|..
gi 1988312898 115 GYNALHLAA-KYGHPQCLKQLLQASCVVDVVD 145
Cdd:pfam00023 2 GNTPLHLAAgRRGNLEIVKLLLSKGADVNARD 33
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
200-253 |
3.24e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 36.94 E-value: 3.24e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1988312898 200 LLQQG-AAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDALGQDAAHY 253
Cdd:pfam13857 1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDL 55
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
1014-1101 |
3.50e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 40.87 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1014 HAAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKekdKKITELSKEVfnlkEALKEQPAALATPEVEALRDQVKD 1093
Cdd:TIGR04320 257 AALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQ---AALATAQKEL----ANAQAQALQTAQNNLATAQAALAN 329
|
....*...
gi 1988312898 1094 LQQQLQEA 1101
Cdd:TIGR04320 330 AEARLAKA 337
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
915-1028 |
3.60e-03 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 41.48 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 915 PASEHRRLQEEALELRgraasleQEVVATGKEAARLRAELERERVCSVALsehERIVGTLQANVAQLEGQLEELGRRHEK 994
Cdd:PRK11448 140 PENLLHALQQEVLTLK-------QQLELQAREKAQSQALAEAQQQELVAL---EGLAAELEEKQQELEAQLEQLQEKAAE 209
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1988312898 995 TSAEVFQVQREAlfmkSERHAAEAQLATAE------QQLR 1028
Cdd:PRK11448 210 TSQERKQKRKEI----TDQAAKRLELSEEEtrilidQQLR 245
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
791-966 |
3.66e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 3.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 791 LEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTA 870
Cdd:PRK04863 515 LQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQAR 594
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 871 AAELGRARD---AAEARVAEL----------PAACEEARQGLAE-LREASEALRQSvvpASEHRRLQEEALELRGRAASl 936
Cdd:PRK04863 595 IQRLAARAPawlAAQDALARLreqsgeefedSQDVTEYMQQLLErERELTVERDEL---AARKQALDEEIERLSQPGGS- 670
|
170 180 190
....*....|....*....|....*....|
gi 1988312898 937 eqevvatgkEAARLRAelERERVCSVALSE 966
Cdd:PRK04863 671 ---------EDPRLNA--LAERFGGVLLSE 689
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
789-1103 |
4.20e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 789 AALEQAREDLRDRDS---RLRELEAASACLDEARaSRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGE 865
Cdd:COG3096 492 QAWQTARELLRRYRSqqaLAQRLQQLRAQLAELE-QRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELE 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 866 QQ----RTAAAELGRARDAAEARVAELPA---ACEEARQGLAELREAS-EAL--RQSVVPASEH-----RRLQEEALELR 930
Cdd:COG3096 571 EQaaeaVEQRSELRQQLEQLRARIKELAArapAWLAAQDALERLREQSgEALadSQEVTAAMQQllereREATVERDELA 650
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 931 GRAASLEQEV----VATGKEAARLRAEleRERVCSVALSE---------------------HERIVGTLQANVAQLEG-- 983
Cdd:COG3096 651 ARKQALESQIerlsQPGGAEDPRLLAL--AERLGGVLLSEiyddvtledapyfsalygparHAIVVPDLSAVKEQLAGle 728
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 984 ----------------------------------------------------------------QLEELGRRHEKTSAEV 999
Cdd:COG3096 729 dcpedlyliegdpdsfddsvfdaeeledavvvklsdrqwrysrfpevplfgraarekrleelraERDELAEQYAKASFDV 808
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1000 FQVQR--EAL--FMKSERHAA-----EAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKdkkitelskevFNLKE 1070
Cdd:COG3096 809 QKLQRlhQAFsqFVGGHLAVAfapdpEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQ-----------LQLLN 877
|
410 420 430
....*....|....*....|....*....|...
gi 1988312898 1071 ALKEQPAALATPEVEALRDQVKDLQQQLQEAAR 1103
Cdd:COG3096 878 KLLPQANLLADETLADRLEELREELDAAQEAQA 910
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
834-988 |
4.50e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 834 AELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAEL---REASEALR 910
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnnKEYEALQK 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1988312898 911 QSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAELERERvcsvalSEHERIVGTLQANVAQLEGQLEEL 988
Cdd:COG1579 97 EIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKK------AELDEELAELEAELEELEAEREEL 168
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
786-1129 |
4.57e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 41.10 E-value: 4.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 786 QLRAALEQAREDLRD-RDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARleqsRELEVLREQLATARATg 864
Cdd:COG5185 250 QTSDKLEKLVEQNTDlRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIK----KATESLEEQLAAAEAE- 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 865 eqqrtaaAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATG 944
Cdd:COG5185 325 -------QELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKSSEELDSFKDTIESTKESLDEIP 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 945 KEAARLRAELERervcsvalseherivgTLQANVAQLEGQLEELGRRHEKTSAEVFQVQREALFMKSERHAAEaQLATAE 1024
Cdd:COG5185 398 QNQRGYAQEILA----------------TLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVM-READEE 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1025 QQLRGLRTEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQpaalatpeVEALRDQVKDLQQQLQEAARD 1104
Cdd:COG5185 461 SQSRLEEAYDEINRSVRSKKEDLNEELTQIESRVSTLKATLEKLRAKLERQ--------LEGVRSKLDQVAESLKDFMRA 532
|
330 340
....*....|....*....|....*...
gi 1988312898 1105 HSSVVALYRS---HLLYAIQGQMDEDVQ 1129
Cdd:COG5185 533 RGYAHILALEnliPASELIQASNAKTDG 560
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
90-266 |
4.92e-03 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 40.72 E-value: 4.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 90 AMR-GAASCLEVMIAHGSNVMSADGAGYNALHLAAKYGHPQCLKQLLqascvVDVVDSSGWTA--LHHAAAGGCLSCSev 166
Cdd:PHA02874 42 AIRsGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLI-----DNGVDTSILPIpcIEKDMIKTILDCG-- 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 167 lcsfkAHLNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEGASPETVEVLLQGGAQPGITDAL 246
Cdd:PHA02874 115 -----IDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNN 189
|
170 180
....*....|....*....|
gi 1988312898 247 GQDAAHYGALAGDKLILHLL 266
Cdd:PHA02874 190 GESPLHNAAEYGDYACIKLL 209
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
800-1055 |
5.32e-03 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 40.73 E-value: 5.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 800 DRDSRLRELEAASACLDEARAsRLLAEEEARGLRAELAQREEARLEQSRELEVLREQlatARATGEQQRTAAAELGRARD 879
Cdd:PRK07735 4 EKDLEDLKKEAARRAKEEARK-RLVAKHGAEISKLEEENREKEKALPKNDDMTIEEA---KRRAAAAAKAKAAALAKQKR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 880 AA------EARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEAARLRAE 953
Cdd:PRK07735 80 EGteevteEEKAKAKAKAAAAAKAKAAALAKQKREGTEEVTEEEKAAAKAKAAAAAKAKAAALAKQKREGTEEVTEEEEE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 954 LERERVCSVALSEHERIVGTLQANVAQLEGQLEELGRRHEKTSAEVfqvqREALFMKSERHAAEAQLATAEQQLRGLRTE 1033
Cdd:PRK07735 160 TDKEKAKAKAAAAAKAKAAALAKQKAAEAGEGTEEVTEEEKAKAKA----KAAAAAKAKAAALAKQKASQGNGDSGDEDA 235
|
250 260
....*....|....*....|..
gi 1988312898 1034 AERARQAQSRAQEALDKAKEKD 1055
Cdd:PRK07735 236 KAKAIAAAKAKAAAAARAKTKG 257
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
319-929 |
5.61e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 40.79 E-value: 5.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 319 DRDAYEEIVRLRQERGRLLQKIRGLEQHKERRQQESPEASS-----------LHILERQVQELQQLLVERQEEKESLGRE 387
Cdd:PRK02224 201 EKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEvleeheerreeLETLEAEIEDLRETIAETEREREELAEE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 388 VESLQSRLSLLENERENT--SYDVTTLQDE--EGELPDLPGAEVLLSRQLS---PSAQEHLA---SLQEQVAVLTRQNQE 457
Cdd:PRK02224 281 VRDLRERLEELEEERDDLlaEAGLDDADAEavEARREELEDRDEELRDRLEecrVAAQAHNEeaeSLREDADDLEERAEE 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 458 LMEKVQILENfEKDETQMEVEALAEVIplalyDSLRAEFDQLRRQHAEALQAL-RQQETREVPREEGAACGESEVAGATA 536
Cdd:PRK02224 361 LREEAAELES-ELEEAREAVEDRREEI-----EELEEEIEELRERFGDAPVDLgNAEDFLEELREERDELREREAELEAT 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 537 TKNGPTHMELNGSVAPETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTETKPTGAEVREMETtEEEA 616
Cdd:PRK02224 435 LRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAED-RIER 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 617 NMETKPTGAQATDTETTGVEAMGVEATKTKAEEAEMQAygvgagqaeppvtgttnmEATGSRATGMEstgvsatgvenpg 696
Cdd:PRK02224 514 LEERREDLEELIAERRETIEEKRERAEELRERAAELEA------------------EAEEKREAAAE------------- 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 697 veatvpgisagpiLHPGAAEASEKLQvELETRIRGLEEALRQREREAAAELEAalgkcEAAEAEAGRLRERVReaegsga 776
Cdd:PRK02224 563 -------------AEEEAEEAREEVA-ELNSKLAELKERIESLERIRTLLAAI-----ADAEDEIERLREKRE------- 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 777 sgggggdttQLRAALEQAREDLRDRDSRLRELEAAsacLDEARAsrllaeEEARGLRAELAQREEARLEQSRELEVLREQ 856
Cdd:PRK02224 617 ---------ALAELNDERRERLAEKRERKRELEAE---FDEARI------EEAREDKERAEEYLEQVEEKLDELREERDD 678
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1988312898 857 LATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEhrRLQEEALEL 929
Cdd:PRK02224 679 LQAEIGAVENELEELEELRERREALENRVEALEALYDEAEELESMYGDLRAELRQRNVETLE--RMLNETFDL 749
|
|
| PRK12472 |
PRK12472 |
hypothetical protein; Provisional |
806-908 |
5.66e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237110 [Multi-domain] Cd Length: 508 Bit Score: 40.62 E-value: 5.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 806 RELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATA-------RATGEQQRT------AAA 872
Cdd:PRK12472 197 REAEDAARAADEAKTAAAAAAREAAPLKASLRKLERAKARADAELKRADKALAAAktdeakaRAEERQQKAaqqaaeAAT 276
|
90 100 110
....*....|....*....|....*....|....*.
gi 1988312898 873 ELGRARDAAEARVAELPAACEEARQGLAELREASEA 908
Cdd:PRK12472 277 QLDTAKADAEAKRAAAAATKEAAKAAAAKKAETAKA 312
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
815-972 |
5.74e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 40.84 E-value: 5.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 815 LDEArASRL-----LAEEEARGLRAELAQreearleqsreLEVLREQLATARATGEQQRtaAAELGRARDAAEARVAELP 889
Cdd:COG0542 395 IDEA-AARVrmeidSKPEELDELERRLEQ-----------LEIEKEALKKEQDEASFER--LAELRDELAELEEELEALK 460
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 890 AACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVV-----------ATGKEAARLRAElERER 958
Cdd:COG0542 461 ARWEAEKELIEEIQELKEELEQRYGKIPELEKELAELEEELAELAPLLREEVteediaevvsrWTGIPVGKLLEG-EREK 539
|
170
....*....|....*.
gi 1988312898 959 VcsVALSE--HERIVG 972
Cdd:COG0542 540 L--LNLEEelHERVIG 553
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
181-211 |
5.97e-03 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 35.34 E-value: 5.97e-03
10 20 30
....*....|....*....|....*....|..
gi 1988312898 181 GATPLIIAAQMC-HTDLCRLLLQQGAAANDQD 211
Cdd:pfam00023 2 GNTPLHLAAGRRgNLEIVKLLLSKGADVNARD 33
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
821-1144 |
5.98e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.93 E-value: 5.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 821 SRLLAEEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAaceearqGLA 900
Cdd:pfam01576 202 GRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEA-------QIS 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 901 ELREASEALRQSVVPASEHRRLQEEALELRGRAASLEQEVVATGKEaarLRAELERErvcsvaLSEHERivgTLQANVAQ 980
Cdd:pfam01576 275 ELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQE---LRSKREQE------VTELKK---ALEEETRS 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 981 LEGQLEELGRRH----EKTSAEVFQVQREALFMKSERHAAE---AQLATAEQQLRGLRTEAERARQA--------QSRAQ 1045
Cdd:pfam01576 343 HEAQLQEMRQKHtqalEELTEQLEQAKRNKANLEKAKQALEsenAELQAELRTLQQAKQDSEHKRKKlegqlqelQARLS 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1046 EALDKAKEKDKKITELSKEVFNLKEALK--EQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALYRS--HLLYAIQ 1121
Cdd:pfam01576 423 ESERQRAELAEKLSKLQSELESVSSLLNeaEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQleDERNSLQ 502
|
330 340
....*....|....*....|...
gi 1988312898 1122 GQMDEDVQRILSQILQMQRLQAQ 1144
Cdd:pfam01576 503 EQLEEEEEAKRNVERQLSTLQAQ 525
|
|
| YqiK |
COG2268 |
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; |
945-1088 |
6.11e-03 |
|
Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown];
Pssm-ID: 441869 [Multi-domain] Cd Length: 439 Bit Score: 40.63 E-value: 6.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 945 KEAARLRAELERERvcSVALSEHERivgtlQANVAQLEGQLEELGRRHEKTSAEVfQVQREALFMKSERHAAEAQLATAE 1024
Cdd:COG2268 199 RDARIAEAEAERET--EIAIAQANR-----EAEEAELEQEREIETARIAEAEAEL-AKKKAEERREAETARAEAEAAYEI 270
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1988312898 1025 QQLRGLRtEAERARQAQSRAQEALDKAKEKDKKITELSKEVFNLKEALKEQPAALATPEVEALR 1088
Cdd:COG2268 271 AEANAER-EVQRQLEIAEREREIELQEKEAEREEAELEADVRKPAEAEKQAAEAEAEAEAEAIR 333
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
901-1074 |
6.90e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.38 E-value: 6.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 901 ELREASEALRQSVVpasehrRLQEEALELRGRAASLEQEVVATGKEAARLRAELER-ERV------------CSVALSEH 967
Cdd:PHA02562 224 ELVEEAKTIKAEIE------ELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQfQKVikmyekggvcptCTQQISEG 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 968 ERIVGTLQANVAQLEGQLEELGRRHEKTSA---EVFQVQREALFMKSerhaaeaQLATAEQQLRGLRTEAERARQAQSRA 1044
Cdd:PHA02562 298 PDRITKIKDKLKELQHSLEKLDTAIDELEEimdEFNEQSKKLLELKN-------KISTNKQSLITLVDKAKKVKAAIEEL 370
|
170 180 190
....*....|....*....|....*....|.
gi 1988312898 1045 QEA-LDKAKEKDKKITELSKEVFNLKEALKE 1074
Cdd:PHA02562 371 QAEfVDNAEELAKLQDELDKIVKTKSELVKE 401
|
|
| PRK12472 |
PRK12472 |
hypothetical protein; Provisional |
788-896 |
6.95e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237110 [Multi-domain] Cd Length: 508 Bit Score: 40.24 E-value: 6.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 788 RAALEQAREDLRDRDSrLRELEAASACLDE--ARASRLLA---EEEARglraelAQREEARLEQSRELEVLREQLATARA 862
Cdd:PRK12472 211 TAAAAAAREAAPLKAS-LRKLERAKARADAelKRADKALAaakTDEAK------ARAEERQQKAAQQAAEAATQLDTAKA 283
|
90 100 110
....*....|....*....|....*....|....
gi 1988312898 863 TGEQQRTAAAELGRARDAAEARVAELPAACEEAR 896
Cdd:PRK12472 284 DAEAKRAAAAATKEAAKAAAAKKAETAKAATDAK 317
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
328-517 |
7.65e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.39 E-value: 7.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 328 RLRQERGRLLQKIRGLEQHKERRQQESPEASSLHILErQVQELQQLLVERQEEKESLGREVESLQSRLSLLENERENTSY 407
Cdd:COG3206 183 QLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQ-QLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQ 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 408 DvTTLQDEEGELPDLPGAEVLLSRQLSPSAQEhLASLQEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALAEVIpla 487
Cdd:COG3206 262 S-PVIQQLRAQLAELEAELAELSARYTPNHPD-VIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQL--- 336
|
170 180 190
....*....|....*....|....*....|
gi 1988312898 488 lyDSLRAEFDQLRRQHAEALQALRQQETRE 517
Cdd:COG3206 337 --AQLEARLAELPELEAELRRLEREVEVAR 364
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
806-1072 |
7.77e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.54 E-value: 7.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 806 RELEAASACLDEARASRLLAEEEARGLRAELAQREE---ARLEQSRELEVLREQLATARATGEQQRTAAAELGRArdaAE 882
Cdd:pfam01576 812 RELEEARASRDEILAQSKESEKKLKNLEAELLQLQEdlaASERARRQAQQERDELADEIASGASGKSALQDEKRR---LE 888
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 883 ARVAELPAACEEArQGLAELreASEALRQSVVPASEhrrLQEEALELRGRAASLEQEVVATGKEAARLRAELERERvcSV 962
Cdd:pfam01576 889 ARIAQLEEELEEE-QSNTEL--LNDRLRKSTLQVEQ---LTTELAAERSTSQKSESARQQLERQNKELKAKLQEME--GT 960
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 963 ALSEHERIVGTLQANVAQLEGQLEE----------LGRRHEKTSAEVF-QVQ---REALFMKSERHAAEAQLATAEQQLR 1028
Cdd:pfam01576 961 VKSKFKSSIAALEAKIAQLEEQLEQesrerqaankLVRRTEKKLKEVLlQVEderRHADQYKDQAEKGNSRMKQLKRQLE 1040
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1988312898 1029 GLRTEAERARQAQSRAQEALDKAKEKDKKiteLSKEVFNLKEAL 1072
Cdd:pfam01576 1041 EAEEEASRANAARRKLQRELDDATESNES---MNREVSTLKSKL 1081
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
785-1066 |
7.85e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 40.49 E-value: 7.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 785 TQLRAALEQAREDLRDRDSRLRELEAASACLDEARASRLLAEEEARGLRAELAQREEARLEQSRELEVLREQL--ATARA 862
Cdd:pfam05557 69 EALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLdlLKAKA 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 863 TGEQQRTAAAELG-RARDAAEARVAELPAACEEARQGLAELREASEALRQSVVPASEHRRLQEEALELRgraaSLEQEVV 941
Cdd:pfam05557 149 SEAEQLRQNLEKQqSSLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPELEKELERLREHNKHLN----ENIENKL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 942 ATGKEAARLRAELER-----ERVCSVALsEHERIVGTLQA--NVAQLEGQleELgRRHEKTSAEVFQVQREALFMKSERH 1014
Cdd:pfam05557 225 LLKEEVEDLKRKLEReekyrEEAATLEL-EKEKLEQELQSwvKLAQDTGL--NL-RSPEDLSRRIEQLQQREIVLKEENS 300
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1988312898 1015 AAEAQLATAEQQLRGLRTEaerARQAQSRAQEALDKAKEKDKKITELSKEVF 1066
Cdd:pfam05557 301 SLTSSARQLEKARRELEQE---LAQYLKKIEDLNKKLKRHKALVRRLQRRVL 349
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
826-1099 |
7.88e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 39.89 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 826 EEEARGLRAELAQREEARLEQSRELEVLREQLATARATGEQQRTAAAELGRARDAAEARVAELPAACEEARQGLAELREA 905
Cdd:COG1340 14 EEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELNEKVKELKEERDELNEKLNELREE 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 906 sealrqsvvpASEHRRLQEEALELRGRAASLEQEVvatgkeaarlrAELERERVCSVALSEHERivgTLQANVAQLEGQL 985
Cdd:COG1340 94 ----------LDELRKELAELNKAGGSIDKLRKEI-----------ERLEWRQQTEVLSPEEEK---ELVEKIKELEKEL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 986 EELGRRHEK--------TSAEVFQVQREALFMKSERHAAEAQLATAE-QQLRGLRTE-AERARQAQSRAQEALDKAKEKD 1055
Cdd:COG1340 150 EKAKKALEKneklkelrAELKELRKEAEEIHKKIKELAEEAQELHEEmIELYKEADElRKEADELHKEIVEAQEKADELH 229
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1988312898 1056 KKITELSKEVFNLKEALKE----QPAALATPEVEALRDQVKDLQQQLQ 1099
Cdd:COG1340 230 EEIIELQKELRELRKELKKlrkkQRALKREKEKEELEEKAEEIFEKLK 277
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
904-1141 |
8.41e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 40.42 E-value: 8.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 904 EASEALrQSVVPASEHRRLQEEalelrgRAASLEQEVVATGKEAARLRAELERERVCSVALSEHERIvGTLQANVAQLEG 983
Cdd:PRK10929 45 EIVEAL-QSALNWLEERKGSLE------RAKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPPNMST-DALEQEILQVSS 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 984 QLEELGRRHEKTSAEVFQVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQAQS---RAQEALDKAKEKDKKITE 1060
Cdd:PRK10929 117 QLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAQLtalQAESAALKALVDELELAQ 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 1061 LS----KEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALYRSHLLYAIQGQMdeDVQRILSQIL 1136
Cdd:PRK10929 197 LSannrQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQREAERALESTELLAEQSGDLPKSIVAQF--KINRELSQAL 274
|
....*..
gi 1988312898 1137 --QMQRL 1141
Cdd:PRK10929 275 nqQAQRM 281
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
174-221 |
8.95e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 35.79 E-value: 8.95e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1988312898 174 LNPQDRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLA 221
Cdd:pfam13857 9 LNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| WEMBL |
pfam05701 |
Weak chloroplast movement under blue light; WEMBL consists of several plant proteins required ... |
807-1080 |
9.30e-03 |
|
Weak chloroplast movement under blue light; WEMBL consists of several plant proteins required for the chloroplast avoidance response under high intensity blue light. This avoidance response consists in the relocation of chloroplasts on the anticlinal side of exposed cells. Acts in association with PMI2 to maintain the velocity of chloroplast photo-relocation movement via the regulation of cp-actin filaments. Thus several member-sequences are described as "myosin heavy chain-like".
Pssm-ID: 461718 [Multi-domain] Cd Length: 562 Bit Score: 40.01 E-value: 9.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 807 ELEAASACLDEARASRLLAEEeaRGLRAELAQRE-----EARLEQS-RELEVLREQLATARATGEQQRTAAAELGRARDA 880
Cdd:pfam05701 188 ELIATKESLESAHAAHLEAEE--HRIGAALAREQdklnwEKELKQAeEELQRLNQQLLSAKDLKSKLETASALLLDLKAE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 881 AEARVAelpAACEEARQGLAELREASEALRQSVVPAsehrrlQEEALELRGRAASLEQEVVATGKEAARLRAELERERVC 960
Cdd:pfam05701 266 LAAYME---SKLKEEADGEGNEKKTSTSIQAALASA------KKELEEVKANIEKAKDEVNCLRVAAASLRSELEKEKAE 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1988312898 961 SVALSEHErivGTLQANVAQLEgqlEELGRrhektsaevfqVQREALFMKSERHAAEAQLATAEQQLRGLRTEAERARQA 1040
Cdd:pfam05701 337 LASLRQRE---GMASIAVSSLE---AELNR-----------TKSEIALVQAKEKEAREKMVELPKQLQQAAQEAEEAKSL 399
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1988312898 1041 QSRAQEALDKAKEK-DKKITELSKEVFNLKEALKEQPAALA 1080
Cdd:pfam05701 400 AQAAREELRKAKEEaEQAKAAASTVESRLEAVLKEIEAAKA 440
|
|
| |
