BEN domain-containing protein 6 [Rattus norvegicus]
Protein Classification
BEN domain-containing protein( domain architecture ID 10660010)
BEN domain-containing protein similar to Homo sapiens protein BANP that controls V(D)J recombination during T-cell development by repressing T-cell receptor (TCR) beta enhancer function; the BEN domain mediates DNA-binding
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| BEN | smart01025 | The BEN domain is found in diverse animal proteins; Proteins containing BEN domains are BANP ... |
190-267 | 1.31e-12 | ||
The BEN domain is found in diverse animal proteins; Proteins containing BEN domains are BANP/SMAR1, NAC1 and the Drosophila mod(mdg4) isoform C, the chordopoxvirus virosomal protein E5R and several proteins of polydnaviruses. Computational analysis suggests that the BEN domain mediates protein-DNA and protein-protein interactions during chromatin organisation and transcription. : Pssm-ID: 214981 Cd Length: 80 Bit Score: 62.00 E-value: 1.31e-12
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| Name | Accession | Description | Interval | E-value | ||
| BEN | smart01025 | The BEN domain is found in diverse animal proteins; Proteins containing BEN domains are BANP ... |
190-267 | 1.31e-12 | ||
The BEN domain is found in diverse animal proteins; Proteins containing BEN domains are BANP/SMAR1, NAC1 and the Drosophila mod(mdg4) isoform C, the chordopoxvirus virosomal protein E5R and several proteins of polydnaviruses. Computational analysis suggests that the BEN domain mediates protein-DNA and protein-protein interactions during chromatin organisation and transcription. Pssm-ID: 214981 Cd Length: 80 Bit Score: 62.00 E-value: 1.31e-12
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| BEN | pfam10523 | BEN domain; The BEN domain is found in diverse animal proteins such as BANP/SMAR1, NAC1 and ... |
191-263 | 3.23e-12 | ||
BEN domain; The BEN domain is found in diverse animal proteins such as BANP/SMAR1, NAC1 and the Drosophila mod(mdg4) isoform C, in the chordopoxvirus virosomal protein E5R and in several proteins of polydnaviruses. Computational analysis suggests that the BEN domain mediates protein-DNA and protein-protein interactions during chromatin organization and transcription. The BEN domain-containing protein 3 (BEND3) is shown to interact (via BEN domains 1 and 3) with ERCC6L (via N-terminal TPR repeat and SNF2 HeliC region of ERCC6L) which stimulates the ERCC6L translocase and ATPase activities. Pssm-ID: 463133 Cd Length: 76 Bit Score: 60.85 E-value: 3.23e-12
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| Name | Accession | Description | Interval | E-value | ||
| BEN | smart01025 | The BEN domain is found in diverse animal proteins; Proteins containing BEN domains are BANP ... |
190-267 | 1.31e-12 | ||
The BEN domain is found in diverse animal proteins; Proteins containing BEN domains are BANP/SMAR1, NAC1 and the Drosophila mod(mdg4) isoform C, the chordopoxvirus virosomal protein E5R and several proteins of polydnaviruses. Computational analysis suggests that the BEN domain mediates protein-DNA and protein-protein interactions during chromatin organisation and transcription. Pssm-ID: 214981 Cd Length: 80 Bit Score: 62.00 E-value: 1.31e-12
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| BEN | pfam10523 | BEN domain; The BEN domain is found in diverse animal proteins such as BANP/SMAR1, NAC1 and ... |
191-263 | 3.23e-12 | ||
BEN domain; The BEN domain is found in diverse animal proteins such as BANP/SMAR1, NAC1 and the Drosophila mod(mdg4) isoform C, in the chordopoxvirus virosomal protein E5R and in several proteins of polydnaviruses. Computational analysis suggests that the BEN domain mediates protein-DNA and protein-protein interactions during chromatin organization and transcription. The BEN domain-containing protein 3 (BEND3) is shown to interact (via BEN domains 1 and 3) with ERCC6L (via N-terminal TPR repeat and SNF2 HeliC region of ERCC6L) which stimulates the ERCC6L translocase and ATPase activities. Pssm-ID: 463133 Cd Length: 76 Bit Score: 60.85 E-value: 3.23e-12
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