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Conserved domains on  [gi|19923245|ref|NP_004373|]
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corticotropin-releasing factor receptor 1 isoform 2 precursor [Homo sapiens]

Protein Classification

hormone receptor; adhesion G protein-coupled receptor L2( domain architecture ID 12183087)

hormone receptor is a class B G-protein coupled receptor (GPCR) for hormones and/or hormone-related peptides; contains a large N-terminal extracellular domain that plays a critical role in peptide hormone recognition; GPCRs transmit physiological signals from the outside of the cell to the inside via G proteins by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins; adhesion G protein-coupled receptor L2 is a calcium-independent receptor of low affinity for alpha-latrotoxin, an excitatory neurotoxin present in black widow spider venom which triggers massive exocytosis from neurons and neuroendocrine cells

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
116-380 0e+00

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


:

Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 531.43  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQSNVGWCRLVTAAY 195
Cdd:cd15445   1 YHIAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLITAFILRNATWFVVQLTMSPEVHQSNVVWCRLVTAAY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 196 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTDYIYQGP 275
Cdd:cd15445  81 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDKLRKWMFICIGWCIPFPIIVAWAIGKLYYDNEKCWFGKRAGVYTDYIYQGP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 276 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQ 355
Cdd:cd15445 161 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEISRIVFIYFNSFLESFQ 240
                       250       260
                ....*....|....*....|....*
gi 19923245 356 GFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15445 241 GFFVSVFYCFLNSEVRSAVRKRWHR 265
HormR smart00008
Domain present in hormone receptors;
40-111 1.81e-21

Domain present in hormone receptors;


:

Pssm-ID: 214468  Cd Length: 70  Bit Score: 87.57  E-value: 1.81e-21
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19923245     40 SGLQCNASVDLIgTCWPRSPAGQLVVRPCPAFFYGVRYNTTnnGYRECLANGSWAAR-VNYSECQEILNEEKK 111
Cdd:smart00008   1 TDLGCPATWDGI-ICWPQTPAGQLVEVPCPKYFSGFSYKTG--ASRNCTENGGWSPPfPNYSNCTSNDYEELK 70
 
Name Accession Description Interval E-value
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
116-380 0e+00

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 531.43  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQSNVGWCRLVTAAY 195
Cdd:cd15445   1 YHIAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLITAFILRNATWFVVQLTMSPEVHQSNVVWCRLVTAAY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 196 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTDYIYQGP 275
Cdd:cd15445  81 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDKLRKWMFICIGWCIPFPIIVAWAIGKLYYDNEKCWFGKRAGVYTDYIYQGP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 276 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQ 355
Cdd:cd15445 161 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEISRIVFIYFNSFLESFQ 240
                       250       260
                ....*....|....*....|....*
gi 19923245 356 GFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15445 241 GFFVSVFYCFLNSEVRSAVRKRWHR 265
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
116-359 4.77e-90

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 272.62  E-value: 4.77e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245   116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQSNVGW--CRLVTA 193
Cdd:pfam00002   1 ALSLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKQDLDHCSWvgCKVVAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245   194 AYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIG--KLYYDNEKCWFGKRPGVYtdYI 271
Cdd:pfam00002  81 FLHYFFLANFFWMLVEGLYLYTLLVEVFFSERKYFWWYLLIGWGVPALVVGIWAGVdpKGYGEDDGCWLSNENGLW--WI 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245   272 YQGPMILVLLINFIFLFNIVRILMTKLRASTTSETI--QYRKAVKATLVLLPLLGITYM--LFFVNPgeDEVSRVVFIYF 347
Cdd:pfam00002 159 IRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDlkQYRRLAKSTLLLLPLLGITWVfgLFAFNP--ENTLRVVFLYL 236
                         250
                  ....*....|..
gi 19923245   348 NSFLESFQGFFV 359
Cdd:pfam00002 237 FLILNSFQGFFV 248
HormR smart00008
Domain present in hormone receptors;
40-111 1.81e-21

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 87.57  E-value: 1.81e-21
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19923245     40 SGLQCNASVDLIgTCWPRSPAGQLVVRPCPAFFYGVRYNTTnnGYRECLANGSWAAR-VNYSECQEILNEEKK 111
Cdd:smart00008   1 TDLGCPATWDGI-ICWPQTPAGQLVEVPCPKYFSGFSYKTG--ASRNCTENGGWSPPfPNYSNCTSNDYEELK 70
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
41-105 1.95e-18

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 78.95  E-value: 1.95e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19923245    41 GLQCNASVDLIgTCWPRSPAGQLVVRPCPAFFYGVRYNttNNGYRECLANGSWAAR--VNYSECQEI 105
Cdd:pfam02793   1 GLGCPRTWDGI-LCWPRTPAGETVEVPCPDYFSGFDPR--GNASRNCTEDGTWSEHppSNYSNCTSN 64
 
Name Accession Description Interval E-value
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
116-380 0e+00

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 531.43  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQSNVGWCRLVTAAY 195
Cdd:cd15445   1 YHIAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLITAFILRNATWFVVQLTMSPEVHQSNVVWCRLVTAAY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 196 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTDYIYQGP 275
Cdd:cd15445  81 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDKLRKWMFICIGWCIPFPIIVAWAIGKLYYDNEKCWFGKRAGVYTDYIYQGP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 276 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQ 355
Cdd:cd15445 161 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEISRIVFIYFNSFLESFQ 240
                       250       260
                ....*....|....*....|....*
gi 19923245 356 GFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15445 241 GFFVSVFYCFLNSEVRSAVRKRWHR 265
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
116-380 5.08e-173

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 483.84  E-value: 5.08e-173
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQSNVGWCRLVTAAY 195
Cdd:cd15264   1 YKVALIIYYLGFSISLVALAVALIIFLYFRSLRCLRNNIHCNLIVTFILRNVTWFIMQNTLTEIHHQSNQWVCRLIVTVY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 196 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTDYIYQGP 275
Cdd:cd15264  81 NYFQVTNFFWMFVEGLYLHTMIVWAYSADKIRFWYYIVIGWCIPCPFVLAWAIVKLLYENEHCWLPKSENSYYDYIYQGP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 276 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQ 355
Cdd:cd15264 161 ILLVLLINFIFLFNIVWVLITKLRASNTLETIQYRKAVKATLVLLPLLGITYMLFFINPGDDKTSRLVFIYFNTFLQSFQ 240
                       250       260
                ....*....|....*....|....*
gi 19923245 356 GFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15264 241 GLFVAVFYCFLNGEVRSAIRKKFSR 265
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
116-380 1.01e-150

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 427.45  E-value: 1.01e-150
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLtMSPEVHQSNVGWCRLVTAAY 195
Cdd:cd15446   1 YKIALIINYLGHCISVGALVVAFLLFLCLRSIRCLRNIIHWNLITTFILRNVMWFLLQM-IDHNIHESNEVWCRCITTIY 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 196 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTDYIYQGP 275
Cdd:cd15446  80 NYFVVTNFFWMFVEGCYLHTAIVMTYSTDKLRKWVFLFIGWCIPCPIIVAWAIGKLYYENEQCWFGKEPGKYIDYIYQGP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 276 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQ 355
Cdd:cd15446 160 VILVLLINFVFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDDISQIVFIYFNSFLQSFQ 239
                       250       260
                ....*....|....*....|....*
gi 19923245 356 GFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15446 240 GFFVSVFYCFLNGEVRSAARKRWHR 264
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
116-380 1.58e-111

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 328.03  E-value: 1.58e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV---------VQLTMSPEVHQSNVG 186
Cdd:cd15041   1 LLVVYYIYLVGYSLSLVALLPAIVIFLYFRSLRCTRIRLHINLFLSFILRAVFWIIwdllvvydrLTSSGVETVLMQNPV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 187 WCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKrPGV 266
Cdd:cd15041  81 GCKLLSVLKRYFKSANYFWMLCEGLYLHRLIVVAFFSEPSSLKLYYAIGWGLPLVIVVIWAIVRALLSNESCWISY-NNG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 267 YTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIY 346
Cdd:cd15041 160 HYEWILYGPNLLALLVNLFFLINILRILLTKLRSHPNAEPSNYRKAVKATLILIPLFGIQYLLTIYRPPDGSEGELVYEY 239
                       250       260       270
                ....*....|....*....|....*....|....
gi 19923245 347 FNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15041 240 FNAILNSSQGFFVAVIYCFLNGEVQSELKRKWSR 273
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
116-359 4.77e-90

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 272.62  E-value: 4.77e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245   116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQSNVGW--CRLVTA 193
Cdd:pfam00002   1 ALSLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKQDLDHCSWvgCKVVAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245   194 AYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIG--KLYYDNEKCWFGKRPGVYtdYI 271
Cdd:pfam00002  81 FLHYFFLANFFWMLVEGLYLYTLLVEVFFSERKYFWWYLLIGWGVPALVVGIWAGVdpKGYGEDDGCWLSNENGLW--WI 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245   272 YQGPMILVLLINFIFLFNIVRILMTKLRASTTSETI--QYRKAVKATLVLLPLLGITYM--LFFVNPgeDEVSRVVFIYF 347
Cdd:pfam00002 159 IRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDlkQYRRLAKSTLLLLPLLGITWVfgLFAFNP--ENTLRVVFLYL 236
                         250
                  ....*....|..
gi 19923245   348 NSFLESFQGFFV 359
Cdd:pfam00002 237 FLILNSFQGFFV 248
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
118-380 3.54e-82

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 253.06  E-value: 3.54e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 118 VAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWF---VVQLTMspevhQSNVGWCRLVTAA 194
Cdd:cd15263   3 VTTTIYFIGYSLSLVALSLALWIFLYFKDLRCLRNTIHTNLMFTYILADLTWIltlTLQVSI-----GEDQKSCIILVVL 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 195 YNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLY---YDNEKCWFGKRPGV----- 266
Cdd:cd15263  78 LHYFHLTNFFWMFVEGLYLYMLVVETFSGENIKLRVYAFIGWGIPAVVIVIWAIVKALaptAPNTALDPNGLLKHcpwma 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 267 --YTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDeVSRVVF 344
Cdd:cd15263 158 ehIVDWIFQGPAILVLAVNLVFLVRIMWVLITKLRSANTVETQQYRKAAKALLVLIPLLGITYILVIAGPTEG-IAANIF 236
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 19923245 345 IYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15263 237 EYVRAVLLSTQGFTVALFYCFLNTEVRNTLRHHFER 272
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
121-380 2.53e-69

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 219.84  E-value: 2.53e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYL---GHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV--VQLTMSPEVHQSNVGWCRLVTAAY 195
Cdd:cd15260   3 FVNYVyigGYSVSLIALIISLAIFFSFRSLRCTRITIHMNLFISFALNNLLWIVwyKLVVDNPEVLLENPIWCQALHVLL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 196 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYY--DNEKCWFGKRpgvYTDYIYQ 273
Cdd:cd15260  83 QYFMVCNYFWMFCEGLYLHTVLVVAFISEKSLMRWFIAIGWGVPLVITAIYAGVRASLpdDTERCWMEES---SYQWILI 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 274 GPMILVLLINFIFLFNIVRILMTKLRA-STTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLE 352
Cdd:cd15260 160 VPVVLSLLINLIFLINIVRVLLTKLRAtSPNPAPAGLRKAVRATLILIPLLGLQFLLIPFRPEPGAPLETIYQYVSALLT 239
                       250       260
                ....*....|....*....|....*...
gi 19923245 353 SFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15260 240 SLQGLCVAVLFCFCNGEVIAAIKRKWRR 267
7tmB1_PTH-R_related cd15272
invertebrate parathyroid hormone-related receptors, member of the class B family of ...
121-380 2.69e-65

invertebrate parathyroid hormone-related receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes parathyroid hormone (PTH)-related receptors found in invertebrates such as mollusks and annelid worms. The PTH family receptors are members of the B1 subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. The parathyroid hormone type 1 receptor (PTH1R) is found in all vertebrate species and is activated by two polypeptide ligands: parathyroid hormone (PTH), an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)- protein that in turn activates adenylyl cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple signaling pathways.


Pssm-ID: 320400 [Multi-domain]  Cd Length: 285  Bit Score: 210.32  E-value: 2.69e-65
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV-----VQLTMSP-EVHQSNVG-------- 186
Cdd:cd15272   6 LMYNIGYGLSLVSLLIAVIIMLYFKKLHCPRNTIHINLFVSFILRAVLSFIkenllVQGVGFPgDVYYDSNGviefkdeg 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 187 --W-CRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWfGKR 263
Cdd:cd15272  86 shWeCKLFFTMFNYILGANYMWIFVEGLYLHMLIFVAVFSENSRVKWYILLGWLSPLLFVLPWVFVRATLEDTLCW-NTN 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 264 PGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSET--IQYRKAVKATLVLLPLLGITYMLFFVNPG--EDEV 339
Cdd:cd15272 165 TNKGYFWIIRGPIVISIAINFLFFINIVRVLFTKLKASNTQESrpFRYRKLAKSTLVLIPLFGVHYMVFVVLPDsmSSDE 244
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 19923245 340 SRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15272 245 AELVWLYFEMFFNSFQGFIVALLFCFLNGEVQSEIKKKWQR 285
7tmB1_PTHR cd15265
parathyroid hormone receptors, member of the class B family of seven-transmembrane G ...
121-380 1.38e-61

parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to a G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. On the other hand, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. Moreover, the PTH3R is more closely related to the PTH1R than PTH2R. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. The PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320393 [Multi-domain]  Cd Length: 289  Bit Score: 200.68  E-value: 1.38e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV----------------------VQLTMSP 178
Cdd:cd15265   6 LIYTVGYSISLVSLTVAVFILGYFRRLHCTRNYIHMHLFVSFMLRAVSIFVkdavlysgsgldelerpsmedlKSIVEAP 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 179 EVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKC 258
Cdd:cd15265  86 PVDKSQYVGCKVAVTLFLYFLATNYYWILVEGLYLHSLIFMAFFSDKKYLWGFTLIGWGFPAVFVIPWASVRATLADTRC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 259 WfgKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLR---ASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPg 335
Cdd:cd15265 166 W--DLSAGNYKWIYQVPILAAIVVNFILFLNIVRVLATKLRetnAGRCDTRQQYRKLAKSTLVLIPLFGVHYIVFMGMP- 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 19923245 336 EDEVSRV--VFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15265 243 YTEVGLLwqIRMHYELFFNSFQGFFVAIIYCFCNGEVQAEIKKRWER 289
7tmB1_Secretin_R-like cd15930
secretin receptor-like group of hormone receptors, member of the class B family of ...
116-380 7.41e-60

secretin receptor-like group of hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents G protein-coupled receptors for structurally similar peptide hormones that include secretin, growth-hormone-releasing hormone (GHRH), pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptors, which are expressed in the brain, pancreas, stomach, kidney, and liver. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. All B1 subfamily GPCRs are able to increase intracellular cAMP levels by coupling to adenylate cyclase via a stimulatory Gs protein. However, depending on its cellular location, some members of subfamily B1 are also capable of coupling to additional G proteins such as G(i/o) and/or G(q) proteins, thereby leading to activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320596 [Multi-domain]  Cd Length: 268  Bit Score: 195.73  E-value: 7.41e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV--VQLTMSPEVHQSNVGW--CRLV 191
Cdd:cd15930   1 YLTVKIIYTVGYSLSLTSLTTAMIILCLFRKLHCTRNYIHMNLFVSFILRAIAVFIkdAVLFSSEDVDHCFVSTvgCKAS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 192 TAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTdYI 271
Cdd:cd15930  81 MVFFQYCVMANFFWLLVEGLYLHTLLVISFFSERRYFWWYVLIGWGAPTVFVTVWIVARLYFEDTGCWDINDESPYW-WI 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 272 YQGPMILVLLINFIFLFNIVRILMTKLRASTTS--ETIQYRKAVKATLVLLPLLGITYMLFFVNPgeDEVSRVVFIYFNS 349
Cdd:cd15930 160 IKGPILISILVNFVLFINIIRILLQKLRSPDIGgnESSQYKRLARSTLLLIPLFGIHYIVFAFFP--ENISLGIRLYFEL 237
                       250       260       270
                ....*....|....*....|....*....|.
gi 19923245 350 FLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15930 238 CLGSFQGFVVAVLYCFLNGEVQAEIKRKWRS 268
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
121-374 1.26e-59

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 194.74  E-value: 1.26e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLtmspEVHQSNVGWCRLVTAAYNYFHV 200
Cdd:cd13952   6 IITYIGCSLSLVGLLLTIITYLLFPKLRNLRGKILINLCLSLLLAQLLFLIGQL----LTSSDRPVLCKALAILLHYFLL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAIVLTYSTDRLRK-WMFICIGWGVPFPIIVAWAI-------GKLYYDNEKCWFGKRPGVYtdYIY 272
Cdd:cd13952  82 ASFFWMLVEAFDLYRTFVKVFGSSERRRfLKYSLYGWGLPLLIVIITAIvdfslygPSPGYGGEYCWLSNGNALL--WAF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 273 QGPMILVLLINFIFLFNIVRILMTKLRASTT-SETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDevSRVVFIYFNSFL 351
Cdd:cd13952 160 YGPVLLILLVNLVFFILTVRILLRKLRETPKqSERKSDRKQLRAYLKLFPLMGLTWIFGILAPFVG--GSLVFWYLFDIL 237
                       250       260
                ....*....|....*....|...
gi 19923245 352 ESFQGFFVSVFYCFLNSEVRSAI 374
Cdd:cd13952 238 NSLQGFFIFLIFCLKNKEVRRLL 260
7tmB1_NPR_B7_insect-like cd15273
insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of ...
118-380 3.84e-59

insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from invertebrates. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320401 [Multi-domain]  Cd Length: 285  Bit Score: 194.13  E-value: 3.84e-59
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 118 VAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATW------FVVQLTMSPEVHQSNVG----- 186
Cdd:cd15273   3 IIKGISQIGYIVSLITLIIAFAIFLSFKKLHCARNKLHMHLFASFILRAFMTllkdslFIDGLGLLADIVERNGGgnevi 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 187 ------W-CRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCW 259
Cdd:cd15273  83 anigsnWvCKAITSLWQYFIIANYSWILMEGLYLHNLIFLALFSDENNIILYILLGWGLPLIFVVPWIVARILFENSLCW 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 260 FGKRpGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFV---NPGE 336
Cdd:cd15273 163 TTNS-NLLNFLIIRIPIMISVLINFILFLNIVRVLLVKLRSSVNEDSRRYKKWAKSTLVLVPLFGVHYTIFLIlsyLDDT 241
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 19923245 337 DEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15273 242 NEAVELIWLFCDQLFASFQGFFVALLYCFLNGEVRAEIQRKWRR 285
7tmB1_secretin cd15275
secretin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
126-380 1.29e-58

secretin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Secretin receptor is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include vasoactive intestinal peptide (VIP), growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors, and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptor, which is expressed in the brain, pancreas, stomach, kidney, and liver.


Pssm-ID: 320403 [Multi-domain]  Cd Length: 271  Bit Score: 192.65  E-value: 1.29e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 126 GHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV--VQLTMSPEVHQSNV--GWCRLVTAAYNYFHVT 201
Cdd:cd15275  11 GYSVSLVSLAIALAILCSFRRLHCTRNYIHMQLFLSFILRAISIFIkdAVLFSSEDDNHCDIytVGCKVAMVFSNYCIMA 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 202 NFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGvYTDYIYQGPMILVLL 281
Cdd:cd15275  91 NYSWLLVEGLYLHSLLSISFFSERKHLWWYIALGWGSPLIFIISWAIARYLHENEGCWDTRRNA-WIWWIIRGPVILSIF 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 282 INFIFLFNIVRILMTKLRASTT--SETIQYRKAVKATLVLLPLLGITYMLFFVNPgEDEVSRVVFI--YFNSFLESFQGF 357
Cdd:cd15275 170 VNFILFLNILRILMRKLRAPDMrgNEFSQYKRLAKSTLLLIPLFGLHYILFAFFP-EDVSSGTMEIwlFFELALGSFQGF 248
                       250       260
                ....*....|....*....|...
gi 19923245 358 FVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15275 249 VVAVLYCFLNGEVQLEIQRKWRR 271
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
116-378 2.09e-54

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 181.47  E-value: 2.09e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQ-----SNVGwCRL 190
Cdd:cd15271   1 FSTVKLLYTVGYGTSLTSLITAVLIFCTFRKLHCTRNYIHINLFVSFILRALAVFIKDAVLFADESVdhctmSTVA-CKA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 191 VTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYtdY 270
Cdd:cd15271  80 AVTFFQFCVLANFFWLLVEGMYLQTLLLLTFTSDRKYFWWYILIGWGAPSVTVTVWVLTRLQYDNRGCWDDLESRIW--W 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 271 IYQGPMILVLLINFIFLFNIVRILMTKLRA--STTSETIQYRKAVKATLVLLPLLGITYMLFFVNPgeDEVSRVVFIYFN 348
Cdd:cd15271 158 IIKTPILLSVFVNFLIFINVIRILVQKLKSpdVGGNDTSHYMRLAKSTLLLIPLFGVHYVVFAFFP--EHVGVEARLYFE 235
                       250       260       270
                ....*....|....*....|....*....|
gi 19923245 349 SFLESFQGFFVSVFYCFLNSEVRSAIRKRW 378
Cdd:cd15271 236 LVLGSFQGFIVALLYCFLNGEVQAEIKKRL 265
7tmB1_calcitonin_R cd15274
calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
116-382 1.27e-53

calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors for calcitonin (CT) and calcitonin gene-related peptides (CGRPs). Calcitonin, a 32-amino acid peptide hormone, is involved in calcium metabolism in many mammalian species and acts to reduce blood calcium levels and directly inhibits bone resorption by acting on osteoclast. Thus, CT acts as an antagonist to parathyroid hormone and is commonly used in the treatment of bone disorders. The CT receptor is predominantly found in osteoclasts, kidney, and brain, and is primarily coupled to stimulatory G(s) protein, which leads to activation of adenylate cyclase, thereby increasing cAMP production. CGRP, a member of the calcitonin family of peptides, is a potent vasodilator and may contribute to migraine. It is expressed in the peripheral and central nervous system and exists in two forms in humans (alpha-CGRP and beta-CGRP). CGRP meditates its physiological effects through calcitonin receptor-like receptor (CRLR) and receptor activity-modifying protein 1 (RAMP1), a single transmembrane domain protein. Thus, the CRLR/RAMP1 complex serves as a functional CGRP receptor. On the other hand, the CRLR/RAMP2 and CRLR/RAMP3 complexes function as adrenomedullin-specific receptors. The CT and CGRP receptors belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide.


Pssm-ID: 341343 [Multi-domain]  Cd Length: 274  Bit Score: 179.59  E-value: 1.27e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIinylGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILrNATWFVVQLTM---SPEVHQSNVGWCRLVT 192
Cdd:cd15274   5 YYLAIV----GHSLSIATLLISLGIFFFFRSLSCQRVTLHKNLFLSYIL-NSIIIIIHLVAvvpNGELVARNPVSCKILH 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 193 AAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGkrPGVYTDYIY 272
Cdd:cd15274  80 FIHQYMMGCNYFWMLCEGIYLHTLIVVAVFAEKQRLMWYYLLGWGFPLIPTTIHAITRAVYYNDNCWLS--SETHLLYII 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 273 QGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPgEDEVSRVVFIYFNSFLE 352
Cdd:cd15274 158 HGPIMAALVVNFFFLLNIVRVLVTKLRETHEAESHMYLKAVKATLILVPLLGIQFVLFPWRP-SGKILGKIYDYVMHSLI 236
                       250       260       270
                ....*....|....*....|....*....|
gi 19923245 353 SFQGFFVSVFYCFLNSEVRSAIRKRWHRWQ 382
Cdd:cd15274 237 HFQGFFVATIFCFCNGEVQATLKRQWNQYK 266
7tmB1_PDFR cd15261
The pigment dispersing factor receptor, member of the class B seven-transmembrane G ...
121-380 1.97e-53

The pigment dispersing factor receptor, member of the class B seven-transmembrane G protein-coupled receptors; The pigment dispersing factor receptor (PDFR) is a G protein-coupled receptor that binds the circadian clock neuropeptide PDF, a functional ortholog of the mammalian vasoactive intestinal peptide (VIP), on the pacemaker neurons. The PDFR is implicated in regulating flight circuit development and in modulating acute flight In Drosophila melanogaster. The PDFR activation stimulates adenylate cyclase, thereby increasing cAMP levels in many different pacemakers, and the receptor signaling has been shown to regulate behavioral circadian rhythms and geotaxis in Drosophila. The PDFR belongs to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. . These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. They play key roles in hormone homeostasis in mammals and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression).


Pssm-ID: 320389 [Multi-domain]  Cd Length: 282  Bit Score: 179.49  E-value: 1.97e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILR-------NATWFVVQLTMSPEVHQSNVG------- 186
Cdd:cd15261   6 TLEIVGLCLSLVSLIISLFIFSYFRTLRNHRTRIHKNLFLAILLQviirlvlYIDQAITRSRGSHTNAATTEGrtinstp 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 187 -WCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAI-GKLYYDNEKCWFGKRP 264
Cdd:cd15261  86 iLCEGFYVLLEYAKTVMFMWMFIEGLYLHNIIVVSVFSGKPNYLFYYILGWGIPIVHTSAWAIvTLIKMKVNRCWFGYYL 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 265 GVYTdYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFV--NPGEDEVSRV 342
Cdd:cd15261 166 TPYY-WILEGPRLAVILINLFFLLNIIRVLVSKLRESHSREIEQVRKAVKAAIVLLPLLGITNILQMIppPLTSVIVGFA 244
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 19923245 343 VFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15261 245 VWSYSTHFLTSFQGFFVALIYCFLNGEVKNVLKKFWRR 282
7tmB1_GLP2R cd15266
glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G ...
121-380 1.13e-52

glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-2 receptor (GLP2R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor (GCGR) and GLP1R. GLP2R is activated by glucagon-like peptide 2, which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. GLP2R belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320394 [Multi-domain]  Cd Length: 280  Bit Score: 177.24  E-value: 1.13e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRnATWFVVQLTMSPEVH----QSNVGW--------- 187
Cdd:cd15266   6 LIYTIGYSLSLISLSLALLILLLLRKLHCTRNYIHMNLFASFILR-ALAVLIKDIVLYSTYskrpDDETGWisylseess 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 188 --CRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDR--LRKWMFicIGWGVPFPIIVAWAIGKLYYDNEKCWfGKR 263
Cdd:cd15266  85 tsCRVAQVFMHYFVGANYFWLLVEGLYLHTLLVTAVLSERrlLKKYML--IGWGTPVLFVVPWGVAKILLENTGCW-GRN 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 264 PGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGE--DEVSR 341
Cdd:cd15266 162 ENMGIWWIIRGPILLCITVNFYIFLKILKLLLSKLKAQQMRFTDYKYRLARSTLVLIPLLGIHEVVFSFITDEqvEGFSR 241
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 19923245 342 VVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15266 242 HIRLFIQLTLSSFQGFLVAVLYCFANGEVKAELKKRWQL 280
7tmB1_GHRHR cd15270
growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane ...
121-380 1.29e-51

growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor (GHRHR) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320398 [Multi-domain]  Cd Length: 268  Bit Score: 174.21  E-value: 1.29e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEV---HQS-NVGWCRLVTAAYN 196
Cdd:cd15270   6 IIYTVGYSISIVSLCVAVAILVAFRRLHCPRNYIHIQLFFTFILKAIAVFIKDAALFQEDdtdHCSmSTVLCKVSVVFCH 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 197 YFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTdYIYQGPM 276
Cdd:cd15270  86 YCVMTNFFWLLVEAVYLNCLLASSFPRGKRYFWWLVLLGWGLPTLCTGTWILCKLYFEDTECWDINNDSPYW-WIIKGPI 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 277 ILVLLINFIFLFNIVRILMTKL--RASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPgeDEVSRVVFIYFNSFLESF 354
Cdd:cd15270 165 VISVGVNFLLFLNIIRILLKKLdpRQINFNNSAQYRRLSKSTLLLIPLFGTHYIIFNFLP--DYAGLGIRLYLELCLGSF 242
                       250       260
                ....*....|....*....|....*.
gi 19923245 355 QGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15270 243 QGFIVAVLYCFLNQEVQTEISRKWYG 268
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
121-380 8.02e-51

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 172.82  E-value: 8.02e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQ----------------------LTMSP 178
Cdd:cd15984   6 LIYTVGYSISLGSLTVAVLILGYFRRLHCTRNYIHMHLFLSFMLRAVSIFVKDavlysgsaleemeriteedlksITEAP 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 179 EVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKC 258
Cdd:cd15984  86 PADKAQFVGCKVAVTFFLYFLATNYYWILVEGLYLHSLIFMAFFSEKKYLWGFTLFGWGLPAVFVTIWASVRATLADTGC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 259 WfgKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLR---ASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPg 335
Cdd:cd15984 166 W--DLSAGNLKWIIQVPILAAIVVNFILFINIVRVLATKLRetnAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMAMP- 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 19923245 336 EDEVSRVVF---IYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15984 243 YTEVSGILWqvqMHYEMLFNSFQGFFVAIIYCFCNGEVQAEIKKSWSR 290
7tmB1_VIP-R1 cd15269
vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of ...
125-380 1.43e-50

vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 1 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320397 [Multi-domain]  Cd Length: 268  Bit Score: 171.57  E-value: 1.43e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 125 LGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTM-----SPEVHQSNVGwCRLVTAAYNYFH 199
Cdd:cd15269  10 IGHSLSLISLTAAMIILCLFRKLHCTRNYIHMHLFMSFILRAIAVFIKDAVLfesgeEDHCSVASVG-CKAAMVFFQYCI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTdYIYQGPMILV 279
Cdd:cd15269  89 MANFFWLLVEGLYLHTLLAVSFFSERKYFWWYILIGWGAPSVFITAWSVARIYFEDVGCWDTIIESLLW-WIIKTPILVS 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 280 LLINFIFLFNIVRILMTKLRASTT--SETIQYRKAVKATLVLLPLLGITYMLFFVNPgeDEVSRVVFIYFNSFLESFQGF 357
Cdd:cd15269 168 ILVNFILFICIIRILVQKLHSPDIgrNESSQYSRLAKSTLLLIPLFGIHYIMFAFFP--DNFKAEVKLVFELILGSFQGF 245
                       250       260
                ....*....|....*....|...
gi 19923245 358 FVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15269 246 VVAVLYCFLNGEVQAELKRKWRR 268
7tmB1_GlucagonR-like cd15929
glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G ...
121-380 1.91e-50

glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents the glucagon receptor family of G protein-coupled receptors, which includes glucagon receptor (GCGR), glucagon-like peptide-1 receptor (GLP1R), GLP2R, and closely related receptors. These receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341353 [Multi-domain]  Cd Length: 279  Bit Score: 171.46  E-value: 1.91e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV---VQLTMSPEVHQSNVGW---------- 187
Cdd:cd15929   6 VMYTVGYSLSLAALVLALAILLGLRKLHCTRNYIHANLFASFILRALSVLVkdaLLPRRYSQKGDQDLWStllsnqaslg 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 188 CRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWfgKRPGVY 267
Cdd:cd15929  86 CRVAQVLMQYCVAANYYWLLVEGLYLHTLLVLAVFSERSIFRLYLLLGWGAPVLFVVPWGIVKYLYENTGCW--TRNDNM 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 268 TDY-IYQGPMILVLLINFIFLFNIVRILMTKLRASTTSET-IQYRKAvKATLVLLPLLGITYMLFfvNPGEDE----VSR 341
Cdd:cd15929 164 AYWwIIRLPILLAILINFFIFVRILKILVSKLRANQMCKTdYKFRLA-KSTLTLIPLLGVHEVVF--AFVTDEqargTLR 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 19923245 342 VVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15929 241 FIKLFFELFLSSFQGLLVAVLYCFANKEVQSELRKKWHR 279
7tmB1_PTH3R cd15983
parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G ...
125-380 1.78e-47

parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 3 receptor (PTH3R), one of the three subtypes of PTH receptor family, is found in chicken and fish, but it is absent in mammals. On the other hand, the PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH1R is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. Conversely, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320649 [Multi-domain]  Cd Length: 285  Bit Score: 163.94  E-value: 1.78e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 125 LGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV------------------VQLTMSPEVHQSNVG 186
Cdd:cd15983  10 IGYSISLAALLVAVCILCYFKRLHCTRNYIHIHLFASFICRAGSIFVkdavlysgtnegealdekIEFGLSPGTRLQWVG 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 187 wCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWfgKRPGV 266
Cdd:cd15983  90 -CKVTVTLFLYFLATNHYWILVEGLYLHSLIFMAFLSDKNYLWALTIIGWGLPAVFVSVWASVRVSLADTQCW--DLSAG 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 267 YTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSET---IQYRKAVKATLVLLPLLGITYMLFFVNPgEDEVSRVV 343
Cdd:cd15983 167 NLKWIYQVPILAAILVNFFLFLNIVRVLASKLWETNTGKLdprQQYRKLLKSTLVLMPLFGVHYVLFMAMP-YTDVTGLL 245
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 19923245 344 F---IYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15983 246 WqiqMHYEMLFNSSQGFFVAFIYCFCNGEVQAEIKKAWLR 285
7tmB1_GCGR cd15267
glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled ...
121-380 6.40e-47

glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon receptor (GCGR) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon-like peptide-1 receptor (GLP1R) and GLP2R. GCGR is activated by glucagon, which is derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320395 [Multi-domain]  Cd Length: 281  Bit Score: 162.30  E-value: 6.40e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTM-------------SPEVHQSNVGW 187
Cdd:cd15267   8 VMYTVGYSLSLGALLLALAILGGFSKLHCMRNAIHMNLFASFILKASSVLVIDGLLrtrysqkieddlsSTWLSDEAVAG 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 188 CRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCW-FGKRPGV 266
Cdd:cd15267  88 CRVAAVFMQYGIVANYCWLLVEGIYLHNLLVLAVFPERSYFSLYLCIGWGAPALFVVPWVVVKCLYENVQCWtSNDNMGF 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 267 YtdYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVS--RVVF 344
Cdd:cd15267 168 W--WILRFPVFLAILINFFIFVRIIQILVSKLRARQMHYTDYKFRLAKSTLTLIPLLGIHEVVFAFVTDEHAQGtlRSAK 245
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 19923245 345 IYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15267 246 LFFDLFLSSFQGLLVAVLYCFLNKEVQSELRRRWHR 281
7tmB1_PTH2R cd15982
parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G ...
121-380 2.46e-46

parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 2 receptor (PTH2R), one of the three subtypes of PTH receptor family, is found in mammals and fish, but not in chicken or frog. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39) but not by PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs. These results suggest that TIP-39 is a natural ligand for PTH2R. Conversely, PTH1R is activated by PTH and PTHrP, but not by TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320648 [Multi-domain]  Cd Length: 289  Bit Score: 160.87  E-value: 2.46e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV----------------------VQLTMSP 178
Cdd:cd15982   6 IMYTVGYSISFSSLAVAIFIIGYFRRLHCTRNYIHMHLFVSFMLRAASIFVkdkvvhthigvkeldavlmndfQNAVDAP 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 179 EVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKC 258
Cdd:cd15982  86 PVDKSQYVGCKIAVVMFIYFLATNYYWILVEGLYLHSLIFVAFFSDTKYLWGFTLIGWGFPAVFVAAWAVVRATLADARC 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 259 WfgKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTT---SETIQYRKAVKATLVLLPLLGITYMLFFVNPG 335
Cdd:cd15982 166 W--ELSAGDIKWIYQAPILAAIGLNFILFLNTVRVLATKIWETNAvgyDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPH 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 19923245 336 EDE-VSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15982 244 TFTgLGWEIRMHCELFFNSFQGFFVSIIYCYCNGEVQTEIKKTWTR 289
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
116-378 4.40e-45

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 157.27  E-value: 4.40e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV-------VQLTMSPEVHQSNVGwC 188
Cdd:cd15986   1 YIVVKTIYTLGHSVSLIALTTGSTILCLFRKLHCTRNYIHLNLFFSFILRAISVLVkddilysSSNTEHCTVPPSLIG-C 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 189 RLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKwMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVyT 268
Cdd:cd15986  80 KVSLVILQYCIMANFYWLLVEGLYLHTLLVVIFSENRHFI-VYLLIGWGIPTVFIIAWIVARIYLEDTGCWDTNDHSV-P 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 269 DYIYQGPMILVLLINFIFLFNIVRILMTKLRASTT--SETIQYRKAVKATLVLLPLLGITYMLFFVNPgeDEVSRVVFIY 346
Cdd:cd15986 158 WWVIRIPIIISIILNFILFISIIRILLQKLRSPDVggNDQSQYKRLAKSTLLLIPLFGVHYIVFVYFP--DSSSSNYQIF 235
                       250       260       270
                ....*....|....*....|....*....|..
gi 19923245 347 FNSFLESFQGFFVSVFYCFLNSEVRSAIRKRW 378
Cdd:cd15986 236 FELCLGSFQGLVVAILYCFLNSEVQGELKRKW 267
7tmB1_PACAP-R1 cd15987
pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B ...
125-378 1.02e-44

pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Pituitary adenylate cyclase-activating polypeptide type 1 receptor (PACAP-R1) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. PACAP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level.


Pssm-ID: 320653 [Multi-domain]  Cd Length: 268  Bit Score: 156.28  E-value: 1.02e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 125 LGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQS----NVGWCRLVTAAYNYFHV 200
Cdd:cd15987  10 VGYSTSLVSLTTAMVILCRFRKLHCTRNFIHMNLFVSFILRAISVFIKDGVLYAEQDSDhcfvSTVECKAVMVFFHYCVM 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWfGKRPGVYTDYIYQGPMILVL 280
Cdd:cd15987  90 SNYFWLFIEGLYLFTLLVETFFPERRYFYWYTIIGWGTPTICVTVWAVLRLHFDDTGCW-DMNDNTALWWVIKGPVVGSI 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 281 LINFIFLFNIVRILMTKLRASTT--SETIQYRKAVKATLVLLPLLGITYMLFFVNPgeDEVSRVVFIYFNSFLESFQGFF 358
Cdd:cd15987 169 MINFVLFIGIIIILVQKLQSPDIggNESSIYLRLARSTLLLIPLFGIHYTVFAFSP--ENVSKRERLVFELGLGSFQGFV 246
                       250       260
                ....*....|....*....|
gi 19923245 359 VSVFYCFLNSEVRSAIRKRW 378
Cdd:cd15987 247 VAVLYCFLNGEVQSEIKRKW 266
7tmB1_GlucagonR-like_1 cd15985
uncharacterized group of glucagon receptor-like proteins, member of the class B family of ...
125-378 3.06e-43

uncharacterized group of glucagon receptor-like proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This group consists of uncharacterized proteins with similarity to members of the glucagon receptor family of G protein-coupled receptors, which include glucagon receptor (GCGR), and glucagon-like peptide-1 receptor (GLP1R), and GLP2R. The glucagon receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320651 [Multi-domain]  Cd Length: 280  Bit Score: 152.78  E-value: 3.06e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 125 LGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRnATWFVVQLTM-----SPEV-----------HQSNVGwC 188
Cdd:cd15985  10 VGYTLSLLTLVSALLILTSIRKLHCTRNYIHANLFASFILR-AVSVIVKDTLlerrwGREImrvadwgellsHKAAIG-C 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 189 RLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYT 268
Cdd:cd15985  88 RMAQVVMQYCILANHYWFFVEAVYLYKLLIGAVFSEKNYYLLYLYLGWGTPVLFVVPWMLAKYLKENKECWALNENMAYW 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 269 dYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDE--VSRVVFIY 346
Cdd:cd15985 168 -WIIRIPILLASLINLLIFMRILKVILSKLRANQKGYADYKLRLAKATLTLIPLFGIHEVVFIFATDEQTtgILRYIKVF 246
                       250       260       270
                ....*....|....*....|....*....|..
gi 19923245 347 FNSFLESFQGFFVSVFYCFLNSEVRSAIRKRW 378
Cdd:cd15985 247 FTLFLNSFQGFLVAVLYCFANKEVKSELLKKW 278
7tmB1_NPR_B3_insect-like cd15262
insect neuropeptide receptor subgroup B3 and related proteins belong to subfamily B1 of ...
111-380 1.19e-39

insect neuropeptide receptor subgroup B3 and related proteins belong to subfamily B1 of hormone receptors; member of the class B secretin-like seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Bombyx mori (silk worm) and its closely related proteins from arthropods. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320390 [Multi-domain]  Cd Length: 270  Bit Score: 142.58  E-value: 1.19e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 111 KSKVHYHVAVIinylghCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNAtwFVV---------QLTMS--PE 179
Cdd:cd15262   2 KQRYRFHVAAL------SVSVVTSLPAVFIFYSYKRLRITRVILHRNLLISIIIRNI--LVIiskvfvildALTSSgdDT 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 180 VHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYStDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCW 259
Cdd:cd15262  74 VMNQNAVVCRLLSIFERAARNAVFACMFVEGFYLHRLIVAVFA-EKSSIRFLYVIGAVLPLFPVIIWAIIRALHNDHSCW 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 260 FGKRPGVytDYIYQGPMILVLLINFIFLFNIVRILMTKLRasTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEV 339
Cdd:cd15262 153 VVDIEGV--QWVLDTPRLFILLVNTVLLVDIIRVLVTKLR--NTEENSQTKSTTRATLFLVPLFGLHFVITAYRPSTDDC 228
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 19923245 340 -SRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15262 229 dWEDIYYYANYLIEGLQGFLVAILFCYINKEVHYLIKNTYRK 270
7tmB1_GLP1R cd15268
glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G ...
121-380 2.67e-38

glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-1 receptor (GLP1R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor and GLP2R. GLP1R is activated by glucagon-like peptide 1 (GLP1), which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341342 [Multi-domain]  Cd Length: 279  Bit Score: 139.32  E-value: 2.67e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLT---MSPEVHQSNVG----------W 187
Cdd:cd15268   6 IIYTVGYALSFSALVIASAILLGFRHLHCTRNYIHLNLFASFILRALSVFIKDAAlkwMYSTAAQQHQWdgllsyqdslS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 188 CRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLT-YSTDRLRKwMFICIGWGVPFPIIVAWAIGKLYYDNEKCWfGKRPGV 266
Cdd:cd15268  86 CRLVFLLMQYCVAANYYWLLVEGVYLYTLLAFSvFSEQRIFR-LYLSIGWGVPLLFVIPWGIVKYLYEDEGCW-TRNSNM 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 267 YTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLF-FVNpgeDEVSRVVFI 345
Cdd:cd15268 164 NYWLIIRLPILFAIGVNFLIFIRVICIVVSKLKANLMCKTDIKCRLAKSTLTLIPLLGTHEVIFaFVM---DEHARGTLR 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 19923245 346 YFNSFLE----SFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15268 241 FVKLFTElsftSFQGLMVAILYCFVNNEVQMEFRKSWER 279
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
121-373 1.92e-37

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 136.30  E-value: 1.92e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATwfvvqLTMSPEVHQSNVGwCRLVTAAYNYFHV 200
Cdd:cd15933   6 IISYIGCGISIACLALTLIIFLVLRVLSSDRFQIHKNLCVALLLAQIL-----LLAGEWAEGNKVA-CKVVAILLHFFFM 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAIVLTYSTDRLRKwMFICIGWGVPFpIIVAWAIG---KLYYDNEKCWFGKRPGVYtdYIYQGPMI 277
Cdd:cd15933  80 AAFSWMLVEGLHLYLMIVKVFNYKSKMR-YYYFIGWGLPA-IIVAISLAilfDDYGSPNVCWLSLDDGLI--WAFVGPVI 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 278 LVLLINFIFLFNIVRILMTKLRAS---TTSETIQYRKAVKATLVLLPLLGITYmLFFVNPGEDEVsrVVFIYFNSFLESF 354
Cdd:cd15933 156 FIITVNTVILILVVKITVSLSTNDakkSQGTLAQIKSTAKASVVLLPILGLTW-LFGVLVVNSQT--IVFQYIFVILNSL 232
                       250
                ....*....|....*....
gi 19923245 355 QGFFVSVFYCFLNSEVRSA 373
Cdd:cd15933 233 QGLMIFLFHCVLNSEVRSA 251
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
121-373 6.02e-35

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 129.62  E-value: 6.02e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCL-RNIIHWNLISAFILRNATWFVVQltmspEVHQSNVGwCRLVTAAYNYFH 199
Cdd:cd15040   6 IITYIGCGLSLLGLLLTIITYILFRKLRKRkPTKILLNLCLALLLANLLFLFGI-----NSTDNPVL-CTAVAALLHYFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTD-RLRKWMFICIGWGVPFPI--IVAWAIGKLYYDNEK-CWFGKRPGVYtdYIYQGP 275
Cdd:cd15040  80 LASFMWMLVEALLLYLRLVKVFGTYpRHFILKYALIGWGLPLIIviITLAVDPDSYGNSSGyCWLSNGNGLY--YAFLGP 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 276 MILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDevsRVVFIYFNSFLESFQ 355
Cdd:cd15040 158 VLLIILVNLVIFVLVLRKLLRLSAKRNKKKRKKTKAQLRAAVSLFFLLGLTWIFGILAIFGA---RVVFQYLFAIFNSLQ 234
                       250
                ....*....|....*...
gi 19923245 356 GFFVSVFYCFLNSEVRSA 373
Cdd:cd15040 235 GFFIFIFHCLRNKEVRKA 252
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
121-380 4.01e-31

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 119.67  E-value: 4.01e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATwFVVQLTmspevHQSNVGWCRLVTAAYNYFHV 200
Cdd:cd15440   6 FITYIGCIISIVCLLLAFITFTCFRNLQCDRNTIHKNLCLCLLIAEIV-FLLGID-----QTENRTLCGVIAGLLHYFFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFpIIVAWAIGkLYYDN----EKCWFgkRPGVYTDYIYQGPM 276
Cdd:cd15440  80 AAFSWMLLEGFQLYVMLVEVFEPEKSRIKWYYLFGYGLPA-LIVAVSAG-VDPTGygteDHCWL--STENGFIWSFVGPV 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 277 ILVLLINFIFLFNIVRILMTKLRASTT----SETIQYRKAVKATLVLLPLLGITYM--LFFVNPGEdevsrVVFIYFNSF 350
Cdd:cd15440 156 IVVLLANLVFLGMAIYVMCRHSSRSASkkdaSKLKNIRGWLKGSIVLVVLLGLTWTfgLLFINQES-----IVMAYIFTI 230
                       250       260       270
                ....*....|....*....|....*....|
gi 19923245 351 LESFQGFFVSVFYCFLNSEVRSAIRkRWHR 380
Cdd:cd15440 231 LNSLQGLFIFIFHCVLNEKVRKELR-RWLR 259
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
121-380 6.46e-25

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 102.33  E-value: 6.46e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLIsafilrnATWFVVQLTMSPEVHQSNVGW-CRLVTAAYNYFH 199
Cdd:cd15441   6 IVTYIGIGISLVLLVIAFLVLSCLRGLQSNSNSIHKNLV-------ACLLLAELLFLLGINQTENLFpCKLIAILLHYFY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPfPIIVAWAIG---KLYYDNEKCWFGKRPGVYTDYIyqGPM 276
Cdd:cd15441  79 LSAFSWLLVESLHLYRMLTEPRDINHGHMRFYYLLGYGIP-AIIVGLSVGlrpDGYGNPDFCWLSVNETLIWSFA--GPI 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 277 ILVLLINFIFLFNIVRILMTKLRASTTSETIQYRkaVKATLVLLPLLGITYMLFFVNPGEDEvsrVVFIYFNSFLESFQG 356
Cdd:cd15441 156 AFVIVITLIIFILALRASCTLKRHVLEKASVRTD--LRSSFLLLPLLGATWVFGLLAVNEDS---ELLHYLFAGLNFLQG 230
                       250       260
                ....*....|....*....|....
gi 19923245 357 FFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15441 231 LFIFLFYCIFNKKVRRELKNALLR 254
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
122-377 5.98e-24

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 100.00  E-value: 5.98e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 122 INYLGHCISLVALLVAFVLFLRLRSIRCLRNI---IHWNLiSAFILRNATWFVVQLTMSPEVHQsnvgwCRLVTAAYNYF 198
Cdd:cd15256   7 ITYVGCSLSIFCLAITLVTFAVLSSVSTIRNQryhIHANL-SFAVLVAQILLLISFRFEPGTLP-----CKIMAILLHFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 199 HVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKL--YYDNEKCWFGKRPGVYtdYIYQGPM 276
Cdd:cd15256  81 FLSAFAWMLVEGLHLYSMVIKVFGSEESKHFYYYGIGWGSPLLICIISLTSALdsYGESDNCWLSLENGAI--WAFVAPA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 277 ILVLLINFIFLFNIVRILmTKLRASTTS---ETIQYRKAVKATLVLLPLLGITYMLFFVNPGEdevSRVVFIYFNSFLES 353
Cdd:cd15256 159 LFVIVVNIGILIAVTRVI-SRISADNYKvhgDANAFKLTAKAVAVLLPILGSSWVFGVLAVNT---HALVFQYMFAIFNS 234
                       250       260
                ....*....|....*....|....
gi 19923245 354 FQGFFVSVFYCFLNSEVRSAIRKR 377
Cdd:cd15256 235 LQGFFIFLFHCLLNSEVRAAFKHK 258
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
121-376 3.88e-22

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 94.88  E-value: 3.88e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFilrnatwFVVQLTMSPEVHQS-NVGWCRLVTAAYNYFH 199
Cdd:cd15252   6 RITQVGIIISLVCLAICIFTFWFFRGLQSDRTTIHKNLCISL-------FLAELVFLIGINTTtNKIFCSVIAGLLHYFF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIV-LTYSTDRLRKWMFIcIGWGVPFPII-VAWAIGKLYYDNEK-CWFgkRPGVYTDYIYQGPM 276
Cdd:cd15252  79 LAAFAWMFIEGIQLYLMLVeVFENEGSRHKNFYI-FGYGSPAVIVgVSAALGYRYYGTTKvCWL--STENYFIWSFIGPA 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 277 ILVLLINFIFLFNIVRILM--TKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEdevSRVVFIYFNSFLESF 354
Cdd:cd15252 156 TLIILLNLIFLGVAIYKMFrhTAGLKPEVSCLENIRSWARGAIALLFLLGLTWIFGVLHINH---ASVVMAYLFTVSNSL 232
                       250       260
                ....*....|....*....|..
gi 19923245 355 QGFFVSVFYCFLNSEVRSAIRK 376
Cdd:cd15252 233 QGMFIFLFHCVLSRKVRKEYYK 254
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
121-376 8.20e-22

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 94.15  E-value: 8.20e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNAtwfvvqLTMSPEVHQSNVGWCRLVTAAYNYFHV 200
Cdd:cd15255   6 TLSFIGCGVSLCALIVTFILFLAVGVPKSERTTVHKNLIFALAAAEF------LLMFSEWAKGNQVACWAVTALLHLFFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFpIIVAWAIGKL---YYDNEKCWFgkrpGVYTDYIYQ--GP 275
Cdd:cd15255  80 AAFSWMLVEGLLLWSKVVAVNMSEDRRMKFYYVTGWGLPV-VIVAVTLATSfnkYVADQHCWL----NVQTDIIWAfvGP 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 276 MILVLLINFIFLFNIVRILMTKLRASTTSET----------IQYRKAVKATLVLLPLLGITYMLffvnpGEDEVSRVVFI 345
Cdd:cd15255 155 VLFVLTVNTFVLFRVVMVTVSSARRRAKMLTpssdlekqigIQIWATAKPVLVLLPVLGLTWLC-----GVLVHLSDVWA 229
                       250       260       270
                ....*....|....*....|....*....|.
gi 19923245 346 YFNSFLESFQGFFVSVFYCFLNSEVRSAIRK 376
Cdd:cd15255 230 YVFITLNSFQGLYIFLVYAIYNSEVRNAIQR 260
HormR smart00008
Domain present in hormone receptors;
40-111 1.81e-21

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 87.57  E-value: 1.81e-21
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19923245     40 SGLQCNASVDLIgTCWPRSPAGQLVVRPCPAFFYGVRYNTTnnGYRECLANGSWAAR-VNYSECQEILNEEKK 111
Cdd:smart00008   1 TDLGCPATWDGI-ICWPQTPAGQLVEVPCPKYFSGFSYKTG--ASRNCTENGGWSPPfPNYSNCTSNDYEELK 70
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
121-381 8.61e-21

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 90.98  E-value: 8.61e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVvqltmSPEVHQSNVGwCRLVTAAYNYFHV 200
Cdd:cd15438   6 LITKVGLSVSLFCLFLCILTFLFCRSIRGTRNTIHLHLCLSLFLAHLIFLL-----GINNTNNQVA-CAVVAGLLHYFFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPII-VAWAIGKLYYDNEK-CWFGKRPGVYTDYIyqGPMIL 278
Cdd:cd15438  80 AAFCWMSLEGVELYLMVVQVFNTQSLKKRYLLLIGYGVPLVIVaISAAVNSKGYGTQRhCWLSLERGFLWSFL--GPVCL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 279 VLLINFIFLFNIVRILMTKLrASTTSETIQYRKAVKATLVL---LPLLGITYMLFFVnpgEDEVSRVVFIYFNSFLESFQ 355
Cdd:cd15438 158 IILVNAIIFVITVWKLAEKF-SSINPDMEKLRKIRALTITAiaqLCILGCTWIFGFF---QFSDSTLVMSYLFTILNSLQ 233
                       250       260
                ....*....|....*....|....*.
gi 19923245 356 GFFVSVFYCFLNSEVrsaiRKRWHRW 381
Cdd:cd15438 234 GLFIFLLHCLLSKQV----REEYSRW 255
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
121-380 2.80e-19

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 87.01  E-value: 2.80e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNaTWFVVQLTmspevHQSNVGWCRLVTAAYNYFHV 200
Cdd:cd15439   6 VITYVGLIISLLCLFLAILTFLLCRSIRNTSTSLHLQLSLCLFLAD-LLFLVGID-----RTDNKVLCSIIAGFLHYLFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAI----VLTY-STDRLRKWMFICIGWGVPfPIIVAWAIG---KLYYDNEKCWFGKRPGVYtdYIY 272
Cdd:cd15439  80 ACFAWMFLEAVHLFLTVrnlkVVNYfSSHRFKKRFMYPVGYGLP-AVIVAISAAvnpQGYGTPKHCWLSMEKGFI--WSF 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 273 QGPMILVLLINFIFLFNIVRILMTKLrASTTSETIQYRK----AVKATLVLLpLLGITYMLFFVNPGEDevsRVVFIYFN 348
Cdd:cd15439 157 LGPVCVIIVINLVLFCLTLWILREKL-SSLNAEVSTLKNtrllTFKAIAQLF-ILGCTWILGLFQVGPV---ATVMAYLF 231
                       250       260       270
                ....*....|....*....|....*....|..
gi 19923245 349 SFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15439 232 TITNSLQGVFIFLVHCLLNRQVREEYRRWITG 263
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
121-375 1.06e-18

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 85.44  E-value: 1.06e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFV---LFLRL---RSIRCLRNIIHWNlISAFILRNATWFVVQLTMSPEVHQSNVgwCRLVTAA 194
Cdd:cd15932   6 YITYVGLGISILSLVLCLIieaLVWKSvtkNKTSYMRHVCLVN-IALSLLIADIWFIIGAAISTPPNPSPA--CTAATFF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 195 YNYFHVTNFFWMFGEGCYLHTAIVLTYST---DRLRKWMFiCIGWGVPFPI----IVAWAIGKLYYDNEKCWFGKRPGvY 267
Cdd:cd15932  83 IHFFYLALFFWMLTLGLLLFYRLVLVFHDmskSTMMAIAF-SLGYGCPLIIaiitVAATAPQGGYTRKGVCWLNWDKT-K 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 268 TDYIYQGPMILVLLINFIflfnIVRILMTKLRASTTSE--TIQYRKA----VKATLVLLPLLGITYM--LFFVNPGEDEV 339
Cdd:cd15932 161 ALLAFVIPALAIVVVNFI----ILIVVIFKLLRPSVGErpSKDEKNAlvqiGKSVAILTPLLGLTWGfgLGTMIDPKSLA 236
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 19923245 340 SRVVFIYFNSFlesfQGFFVSVFYCFLNSEVRSAIR 375
Cdd:cd15932 237 FHIIFAILNSF----QGFFILVFGTLLDSKVREALL 268
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
117-380 1.13e-18

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 85.16  E-value: 1.13e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 117 HVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNI-IHWNLISAFILRNATWFV-VQLTMSPEVhqsnvGWCRLVTAA 194
Cdd:cd15258   2 HILTFISYVGCGISAIFLAITILTYIAFRKLRRDYPSkIHMNLCAALLLLNLAFLLsSWIASFGSD-----GLCIAVAVA 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 195 YNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICI-GWGvpFPIIVAWAIGKLYYDNE-KCWFGKRPGVYTDYI- 271
Cdd:cd15258  77 LHYFLLACLTWMGLEAFHLYLLLVKVFNTYIRRYILKLCLvGWG--LPALLVTLVLSVRSDNYgPITIPNGEGFQNDSFc 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 272 -YQGPMILVLLI----NFIFLFNIVRI------LMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGedeVS 340
Cdd:cd15258 155 wIRDPVVFYITVvgyfGLTFLFNMVMLatvlvqICRLREKAQATPRKRALHDLLTLLGLTFLLGLTWGLAFFAWG---PF 231
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 19923245 341 RVVFIYFNSFLESFQGFFVSVFYCFLnsevRSAIRKRWHR 380
Cdd:cd15258 232 NLPFLYLFAIFNSLQGFFIFIWYCSM----KENVRKQWRA 267
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
41-105 1.95e-18

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 78.95  E-value: 1.95e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 19923245    41 GLQCNASVDLIgTCWPRSPAGQLVVRPCPAFFYGVRYNttNNGYRECLANGSWAAR--VNYSECQEI 105
Cdd:pfam02793   1 GLGCPRTWDGI-LCWPRTPAGETVEVPCPDYFSGFDPR--GNASRNCTEDGTWSEHppSNYSNCTSN 64
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
121-375 2.76e-18

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 83.74  E-value: 2.76e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFV-VQLTMSPEVhqsnvgwCRLVTAAYNYFH 199
Cdd:cd15991   6 IITYTTVSLSLVALLITFILLVLIRTLRSNLHSIHKNLVAALFFSELIFLIgINQTENPFV-------CTVVAILLHYFY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPfPIIVAWAIG---KLYYDNEKCWFgkrpGVYTDYIYQ--G 274
Cdd:cd15991  79 MSTFAWMFVEGLHIYRMLTEVRNINTGHMRFYYVVGWGIP-AIITGLAVGldpQGYGNPDFCWL----SVQDTLIWSfaG 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 275 PMILVLLINFIFLfnIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSrvvFIYFNSFLESF 354
Cdd:cd15991 154 PIGIVVIINTVIF--VLAAKASCGRRQRYFEKSGVISMLRTAFLLLLLISATWLLGLMAVNSDTLS---FHYLFAIFSCL 228
                       250       260
                ....*....|....*....|.
gi 19923245 355 QGFFVSVFYCFLNSEVRSAIR 375
Cdd:cd15991 229 QGIFIFFFHCIFNKEVRKHLK 249
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
118-377 6.10e-18

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 82.69  E-value: 6.10e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 118 VAVIINYLGHCISLVALLVAFVLFLRLrsIRCLRNIIHWNLISAFILRNATWFVVQltmspeVHQSNVGWCRLVTAAYNY 197
Cdd:cd15251   6 VTLIVGCGVSCLALLTLLAIYAAFWRY--IRSERSIILINFCLSIISSNILILVGQ------TQTLNKGVCTMTAAFLHF 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 198 FHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKwMFICIGWGVPfPIIVAWAIG----KLYYDNEKCWFGKRPGVYtdYIYQ 273
Cdd:cd15251  78 FFLSSFCWVLTEAWQSYMAVTGRMRTRLIRK-RFLCLGWGLP-ALVVAVSVGftrtKGYGTSSYCWLSLEGGLL--YAFV 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 274 GPMILVLLINFIFLFNIVRILMTKLRASTTSETiqyrkAVKATLVLLPLLGITYMlFFVNPGEDEVSRVVFIYFNSFlES 353
Cdd:cd15251 154 GPAAAVVLVNMVIGILVFNKLVSRDGISDNAMA-----SLWSSCVVLPLLALTWM-SAVLAMTDRRSVLFQILFAVF-DS 226
                       250       260
                ....*....|....*....|....
gi 19923245 354 FQGFFVSVFYCFLNSEVRSAIRKR 377
Cdd:cd15251 227 LQGFVIVMVHCILRREVQDAVKCR 250
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
118-379 8.83e-18

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 82.79  E-value: 8.83e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 118 VAVIINYLGHCISLVALLVAFVLFLRLRSIRclRNI---IHWNLISAFILRNatwfVVQLTMSPEVHQSNVGWCRLVTAA 194
Cdd:cd15997   3 ILTLITYLGCGISSIFLGITLVTYLAFEKLR--RDYpskILINLCTALLMLN----LVFLLNSWLSSFNNYGLCITVAAF 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 195 YNYFHVTNFFWMFGEGCYLHTAIVLTYSTdRLRKWM--FICIGWGVPFPII-VAWAIGKLYYDNEK-----------CWF 260
Cdd:cd15997  77 LHYFLLASFTWMGLEAVHMYFALVKVFNI-YIPNYIlkFCIAGWGIPAVVVaLVLAINKDFYGNELssdslhpstpfCWI 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 261 GKRPGVYTDYIyqGPMILVLLINfIFLFNIVRILMTKLRASTTSETIQ--YRKAVKATLVLLPLLGITYMLFFVNPGEde 338
Cdd:cd15997 156 QDDVVFYISVV--AYFCLIFLCN-ISMFITVLIQIRSMKAKKPSRNWKqgFLHDLKSVASLTFLLGLTWGFAFFAWGP-- 230
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 19923245 339 vSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVrsaiRKRWH 379
Cdd:cd15997 231 -VRIFFLYLFSICNTLQGFFIFVFHCLMKENV----RKQWR 266
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
121-371 2.17e-17

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 81.53  E-value: 2.17e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNL-ISAFILRNATWFVVQLTMSPEVhqsnvgwCRLVTAAYNYFH 199
Cdd:cd16005   6 VITWVGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNLcISLFVAELLFLIGINRTDQPIA-------CAVFAALLHFFF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPII-VAWAIGKLYYDNEK-CWFgkRPGVYTDYIYQGPMI 277
Cdd:cd16005  79 LAAFTWMFLEGVQLYIMLVEVFESEHSRRKYFYLVGYGMPALIVaVSAAVDYRSYGTDKvCWL--RLDTYFIWSFIGPAT 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 278 LVLLINFIFLFNIVRILM--TKLRASTTSETIQYRKAVKATLVLLPLLGITYM--LFFVNPgedevSRVVFIYFNSFLES 353
Cdd:cd16005 157 LIIMLNVIFLGIALYKMFhhTAILKPESGCLDNIKSWVIGAIALLCLLGLTWAfgLMYINE-----STVIMAYLFTIFNS 231
                       250
                ....*....|....*...
gi 19923245 354 FQGFFVSVFYCFLNSEVR 371
Cdd:cd16005 232 LQGMFIFIFHCVLQKKVR 249
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
122-380 2.61e-16

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 78.65  E-value: 2.61e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 122 INYLGHCISLVALLVAFVLFlRLRSIRCLRNII----HWNLIS-AFILRNA-TWFVVQLTMSPEvHQSNVgwCRLVTAAY 195
Cdd:cd15253   7 LSQVGLGASILALLLCLGIY-RLVWRSVVRNKIsyfrHMTLVNiAFSLLLAdTCFLGATFLSAG-HESPL--CLAAAFLC 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 196 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEK------CWFGKRPGVYtd 269
Cdd:cd15253  83 HFFYLATFFWMLVQALMLFHQLLFVFHQLAKRSVLPLMVTLGYLCPLLIAAATVAYYYPKRQylhegaCWLNGESGAI-- 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 270 YIYQGPMILVLLINFIFLFnivrILMTKLRASTTSET--IQYRKA----VKATLVLLPLLGITYMLFFVNPGEDevSRVV 343
Cdd:cd15253 161 YAFSIPVLAIVLVNLLVLF----VVLMKLMRPSVSEGppPEERKAllsiFKALLVLTPVFGLTWGLGVATLTGE--SSQV 234
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 19923245 344 FIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHR 380
Cdd:cd15253 235 SHYGFAILNAFQGVFILLFGCLMDKKVREALLKRLCK 271
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
121-376 3.40e-16

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 78.03  E-value: 3.40e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHqsnvgwCRLVTAAYNYFHV 200
Cdd:cd16006   6 VITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINLFIAEFIFLIGIDKTEYKIA------CPIFAGLLHFFFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPII-VAWAIGKLYYDNEK-CWFgkRPGVYTDYIYQGPMIL 278
Cdd:cd16006  80 AAFAWMCLEGVQLYLMLVEVFESEYSRKKYYYVAGYLFPATVVgVSAAIDYKSYGTEKaCWL--RVDNYFIWSFIGPVTF 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 279 VLLINFIFLfniVRILMTKLRASTT-----SETIQYRKAVKATLVLLPLLGITYM--LFFVNPgedevSRVVFIYFNSFL 351
Cdd:cd16006 158 IILLNLIFL---VITLCKMVKHSNTlkpdsSRLENIKSWVLGAFALLCLLGLTWSfgLLFINE-----ETIVMAYLFTIF 229
                       250       260
                ....*....|....*....|....*
gi 19923245 352 ESFQGFFVSVFYCFLNSEVRSAIRK 376
Cdd:cd16006 230 NAFQGMFIFIFHCALQKKVRKEYSK 254
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
121-376 6.24e-16

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 77.27  E-value: 6.24e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNL-ISAFILRnaTWFVVQLTMSpevhQSNVGwCRLVTAAYNYFH 199
Cdd:cd16007   6 VITWVGIVISLVCLAICISTFCFLRGLQTDRNTIHKNLcINLFLAE--LLFLIGIDKT----QYQIA-CPIFAGLLHFFF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPII-VAWAIGKLYYDNEK-CWFgkRPGVYTDYIYQGPMI 277
Cdd:cd16007  79 LAAFSWLCLEGVQLYLMLVEVFESEYSRKKYYYLCGYCFPALVVgISAAIDYRSYGTEKaCWL--RVDNYFIWSFIGPVS 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 278 LVLLINFIFLFNIVRILM--TKLRASTTSETIQYRKAVKATLVLLPLLGITYM--LFFVNPgedevSRVVFIYFNSFLES 353
Cdd:cd16007 157 FVIVVNLVFLMVTLHKMIrsSSVLKPDSSRLDNIKSWALGAITLLFLLGLTWAfgLLFINK-----ESVVMAYLFTTFNA 231
                       250       260
                ....*....|....*....|...
gi 19923245 354 FQGFFVSVFYCFLNSEVRSAIRK 376
Cdd:cd16007 232 FQGMFIFIFHCALQKKVHKEYSK 254
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
121-376 7.73e-16

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 76.78  E-value: 7.73e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNAtwfvvqLTMSPEVHQSNVGWCRLVTAAYNYFHV 200
Cdd:cd15931   6 WINRVGVIVSLFCLGLAIFTFLLCRWIPKINTTAHLHLCLCLSMSHT------LFLAGIEYVENELACTVMAGLLHYLFL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 201 TNFFWMFGEGCYLHTAI-----VLTYSTDRLRKWMFICIGWGVPFPIIVAWAI--GKLYYDNEKCWFGKRPGVytDYIYQ 273
Cdd:cd15931  80 ASFVWMLLEALQLHLLVrrltkVQVIQRDGLPRPLLCLIGYGVPFLIVGVSALvySDGYGEAKMCWLSQERGF--NWSFL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 274 GPMILVLLINFIFLFNIVRILMTKLrASTTSETIQYRKAVKATLVL---LPLLGITYM--LFFVNPgedevSRVVFIYFN 348
Cdd:cd15931 158 GPVIAIIGINWILFCATLWCLRQTL-SNMNSDISQLKDTRLLTFKAvaqLFILGCTWVlgLFQTNP-----VALVFQYLF 231
                       250       260
                ....*....|....*....|....*...
gi 19923245 349 SFLESFQGFFVSVFYCFLNSEVRSAIRK 376
Cdd:cd15931 232 TILNSLQGAFLFLVHCLLNKEVREEYIK 259
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
128-375 1.97e-14

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 73.45  E-value: 1.97e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 128 CISLVALLVAFVLFLRLrsIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEvhqsnvGWCRLVTAAYNYFHVTNFFWMF 207
Cdd:cd15988  16 CMALLILLAIYAAFWRF--IRSERSIILLNFCLSILASNILILVGQSQTLSK------GVCTMTAAFLHFFFLSSFCWVL 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 208 GEGCYLHTAIVLTYSTDRLRKwMFICIGWGVPfPIIVAWAIG----KLYYDNEKCWFGKRPGVYtdYIYQGPMILVLLIN 283
Cdd:cd15988  88 TEAWQSYLAVIGRMRTRLVRK-RFLCLGWGLP-ALVVAVSVGftrtKGYGTASYCWLSLEGGLL--YAFVGPAAVIVLVN 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 284 F---IFLFNIV-----------------------RILM----------TKLRASTTSETIqyrKAVKATLVLLPLLGITY 327
Cdd:cd15988 164 MligIIVFNKLmsrdgisdkskkqragseaepcsSLLLkcskcgvvssAAMSSATASSAM---ASLWSSCVVLPLLALTW 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 19923245 328 M--LFFVNPGEDEVSRVVFIYFNsfleSFQGFFVSVFYCFLNSEVRSAIR 375
Cdd:cd15988 241 MsaVLAMTDRRSILFQVLFAVFN----SVQGFVIITVHCFLRREVQDVVK 286
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
116-371 3.13e-14

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 72.22  E-value: 3.13e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 116 YHVAVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATwFVVQLTMSpevhqSNVGWCRLVTAAY 195
Cdd:cd15437   1 YNVLTRITQLGIIISLICLSMCIFTFWFFSEIQSTRTTIHKNLCCSLFLAELI-FLIGINMN-----ANKLFCSIIAGLL 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 196 NYFHVTNFFWMFGEGCYLHTAIV-LTYSTDRLRKWMFIcIGWGVPFPII-VAWAIGKLYYDNEK-CWFGKRPGVYTDYIy 272
Cdd:cd15437  75 HYFFLAAFAWMCIEGIHLYLIVVgVIYNKGFLHKNFYI-FGYGSPAVVVgISAALGYKYYGTTKvCWLSTENNFIWSFI- 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 273 qGPMILVLLINF----IFLFNIVRILMTKLRASTTSETIqyRKAVKATLVLLPLLGITYM---LFFVNpgedevSRVVFI 345
Cdd:cd15437 153 -GPACLIILVNLlafgVIIYKVFRHTAMLKPEVSCYENI--RSCARGALALLFLLGATWIfgvLHVVY------GSVVTA 223
                       250       260
                ....*....|....*....|....*.
gi 19923245 346 YFNSFLESFQGFFVSVFYCFLNSEVR 371
Cdd:cd15437 224 YLFTISNAFQGMFIFIFLCVLSRKIQ 249
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
121-371 1.67e-13

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 70.21  E-value: 1.67e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNL-ISAFILRNATWFVVQLTMSPEVhqsnvgwCRLVTAAYNYFH 199
Cdd:cd15436   6 VITWVGIVISLVCLLICIFTFCFFRGLQTDRNTIHKNLcINLFIAELLFLIGINRTQYTIA-------CPIFAGLLHFFF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPII-VAWAIGKLYYDNEK-CWFgkRPGVYTDYIYQGPMI 277
Cdd:cd15436  79 LAAFCWLCLEGVQLYLLLVEVFESEYSRRKYFYLCGYSFPALVVaVSAAIDYRSYGTEKaCWL--RVDNYFIWSFIGPVT 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 278 LVLLINFIFL----FNIVRILMTKLRASTTSETIqyRKAVKATLVLLPLLGITYM--LFFVNPgedevSRVVFIYFNSFL 351
Cdd:cd15436 157 FVITLNLVFLvitlHKMVSHSDLLKPDSSRLDNI--KSWALGAIALLFLLGLTWSfgLMFINE-----ESVVMAYLFTIF 229
                       250       260
                ....*....|....*....|
gi 19923245 352 ESFQGFFVSVFYCFLNSEVR 371
Cdd:cd15436 230 NAFQGVFIFIFHCALQKKVR 249
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
121-373 2.33e-13

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 69.49  E-value: 2.33e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLisafilrNATWFVVQLTMSPEVHQS-NVGWCRLVTAAYNYFH 199
Cdd:cd15993   6 IVTYSSVSASLAALVLTFSVLTCLRGLKSNTRGIHSNI-------AAALFLSELLFLLGINRTeNQFLCTVVAILLHYFF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPfPIIVAWAIG---KLYYDNEKCWFGKRPGVYtdYIYQGPM 276
Cdd:cd15993  79 LSTFAWLFVQGLHIYRMQTEARNVNFGAMRFYYAIGWGVP-AIITGLAVGldpEGYGNPDFCWISIHDKLV--WSFAGPI 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 277 ILVLLINFIFLFNIVRILMTKLRASTTSETIQyrKAVKATLVLLPLLGITYM--LFFVNPgedevSRVVFIYFNSFLESF 354
Cdd:cd15993 156 VVVIVMNGVMFLLVARMSCSPGQKETKKTSVL--MTLRSSFLLLLLISATWLfgLLAVNN-----SVLAFHYLHAILCCL 228
                       250
                ....*....|....*....
gi 19923245 355 QGFFVSVFYCFLNSEVRSA 373
Cdd:cd15993 229 QGLAVLLLFCVLNEEVQEA 247
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
121-376 8.33e-13

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 68.75  E-value: 8.33e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLR----------NIIHWNLISAFILRNAT----------WFVVQLTMSPEV 180
Cdd:cd15257   6 IISTIGCVLSIAGLVITIIFHLHTRKLRKSSvtwvllnlcsSLLLFNIIFTSGVENTNndyeistvpdRETNTVLLSEEY 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 181 HQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTdrlRKWMFI----CIGWGVPfPIIVAWAIGKLYYDN- 255
Cdd:cd15257  86 VEPDTDVCTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRMMKP---LPEMFIlqasAIGWGIP-AVVVAITLGATYRFPt 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 256 ------------EKCWFGkrpGVYTDYIYQGPMI--LVLLINFIFLFNIVRILMT------KLRASTTSETIQYRKAVKA 315
Cdd:cd15257 162 slpvftrtyrqeEFCWLA---ALDKNFDIKKPLLwgFLLPVGLILITNVILFIMTsqkvlkKNNKKLTTKKRSYMKKIYI 238
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 19923245 316 TLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRK 376
Cdd:cd15257 239 TVSVAVVFGITWILGYLMLVNNDLSKLVFSYIFCITNTTQGVQIFILYTWRTPEFRKLVSK 299
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
130-377 9.67e-13

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 68.09  E-value: 9.67e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 130 SLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNAtwfvvqLTMSPEVHQSNVGWCRLVTAAYNYFHVTNFFWMFGE 209
Cdd:cd15990  19 SLTLLLLIIIYVSVWRYIRSERSVILINFCLSIISSNA------LILIGQTQTRNKVVCTLVAAFLHFFFLSSFCWVLTE 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 210 GCYLHTAiVLTYSTDRLRKWMFICIGWGVPfPIIVAWAIG----KLYYDNEKCWFGKRPGVYtdYIYQGPMILVLLINFI 285
Cdd:cd15990  93 AWQSYMA-VTGRLRNRIIRKRFLCLGWGLP-ALVVAISVGftkaKGYGTVNYCWLSLEGGLL--YAFVGPAAAVVLVNMV 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 286 FLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMlFFVNPGEDEVSRVVFIYFNSFlESFQGFFVSVFYCF 365
Cdd:cd15990 169 IGILVFNKLVSKDGITDKKLKERAGASLWSSCVVLPLLALTWM-SAVLAITDRRSALFQILFAVF-DSLEGFVIVMVHCI 246
                       250
                ....*....|..
gi 19923245 366 LNSEVRSAIRKR 377
Cdd:cd15990 247 LRREVQDAVKCR 258
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
118-377 2.01e-12

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 67.40  E-value: 2.01e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 118 VAVIINYLGHCISLVALLVAFVLFLRLrsIRCLRNIIHWNLISAFILRNatwfVVQLTMSPEVHQSNVgwCRLVTAAYNY 197
Cdd:cd15989   8 VTLIVGCGLSCLALITLAVVYAALWRY--IRSERSIILINFCLSIISSN----ILILVGQTQTHNKGI--CTMTTAFLHF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 198 FHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKwMFICIGWGVPfPIIVAWAIG----KLYYDNEKCWFGKRPGVYtdYIYQ 273
Cdd:cd15989  80 FFLASFCWVLTEAWQSYMAVTGKIRTRLIRK-RFLCLGWGLP-ALVVAISMGftkaKGYGTPHYCWLSLEGGLL--YAFV 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 274 GPMILVLLINF---IFLFNIV----RILMTKLR----------------------ASTTSETIQYRKAVKATL----VLL 320
Cdd:cd15989 156 GPAAAVVLVNMvigILVFNKLvsrdGILDKKLKhragqmsephsgltlkcakcgvVSTTALSATTASNAMASLwsscVVL 235
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 19923245 321 PLLGITYMlFFVNPGEDEVSRVVFIYFNSFlESFQGFFVSVFYCFLNSEVRSAIRKR 377
Cdd:cd15989 236 PLLALTWM-SAVLAMTDKRSILFQILFAVF-DSLQGFVIVMVHCILRREVQDAFRCR 290
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
121-378 2.45e-12

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 66.87  E-value: 2.45e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCL--RNIIhwNLISAFILRNATWFVVQLTMSPevhqsNVGWCRLVTAAYNYF 198
Cdd:cd15039   6 ILTLIGLIISLVFLLLTLAVYALLPELRNLhgKCLM--CLVLSLFVAYLLLLIGQLLSSG-----DSTLCVALGILLHFF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 199 HVTNFFWM----------FGegcylHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAI---------GKLYYDNEKCW 259
Cdd:cd15039  79 FLAAFFWLnvmsfdiwrtFR-----GKRSSSSRSKERKRFLRYSLYAWGVPLLLVAVTIIvdfspntdsLRPGYGEGSCW 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 260 FGKRPGVYTdYIYqGPMILVLLINFI-FLFNIVRILMTKlraSTTSETIQYRKAVKATLV----LLPLLGITYMLFFVNP 334
Cdd:cd15039 154 ISNPWALLL-YFY-GPVALLLLFNIIlFILTAIRIRKVK---KETAKVQSRLRSDKQRFRlylkLFVIMGVTWILEIISW 228
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 19923245 335 --GEDEVSRVVFIYFNsfleSFQGFFvsVFYCF-LNSEVRSAIRKRW 378
Cdd:cd15039 229 fvGGSSVLWYIFDILN----GLQGVF--IFLIFvCKRRVLRLLKKKI 269
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
122-381 6.31e-12

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 65.62  E-value: 6.31e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 122 INYLGHCISLVALLVAFVLFLRLRSIRclRNI---IHWNLISAFILRNATWFVVQLTmspEVHQSNVGWCRLVTAAYNYF 198
Cdd:cd15444   7 ITYIGCGLSAIFLSVTLVTYIAFEKIR--RDYpskILIQLCVALLLLNLVFLLDSWI---ALYKDIVGLCISVAVFLHYF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 199 HVTNFFWMFGEGCYLHTAIVLTYSTdRLRKWM--FICIGWGVP-FPIIVAWAIGK--------LYYDN----EKCWFGKR 263
Cdd:cd15444  82 LLVSFTWMGLEAFHMYLALVKVFNT-YIRKYIlkFCIVGWGVPaVVVAIVLAVSKdnyglgsyGKSPNgstdDFCWINNN 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 264 PGVYTDYIYQGPMILVLLINF--IFLFNIVRILMTKLRASTTSETIQYRKAVKAtlvLLPLLGITYMLFFVNPGEdevSR 341
Cdd:cd15444 161 IVFYITVVGYFCVIFLLNISMfiVVLVQLCRIKKQKQLGAQRKTSLQDLRSVAG---ITFLLGITWGFAFFAWGP---VN 234
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 19923245 342 VVFIYFNSFLESFQGFFVSVFYCFlnseVRSAIRKRWHRW 381
Cdd:cd15444 235 LAFMYLFAIFNTLQGFFIFIFYCV----AKENVRKQWRRY 270
7tmB2_GPR116_Ig-Hepta cd15254
The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family ...
121-378 3.75e-11

The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR116 (also known as Ig-hepta) is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR113, and GPR115. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR116 has four I-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. GPR116 is highly expressed in fetal and adult lung, and it has been shown to regulate lung surfactant levels as well as to stimulate breast cancer metastasis through a G(q)-p63-RhoGEF-Rho GTPase signaling pathway. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320382 [Multi-domain]  Cd Length: 275  Bit Score: 63.28  E-value: 3.75e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVL------FLRLRSIRCLRNIIHWNlISAFILRNATWFVVQLTMSPEVHQSNVGWCRLVTAA 194
Cdd:cd15254   6 YITYIGLSISILSLAICIVIeslvwkSVTKNRTSYMRHVCILN-IAVSLLIADIWFIVVAAIQDQNYAVNGNVCVAATFF 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 195 YNYFHVTNFFWMFGEGCYL--HTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYD----NEKCWFGKRPGVYT 268
Cdd:cd15254  85 IHFFYLCVFFWMLALGLMLfyRLVFILHDTSKTIQKAVAFCLGYGCPLIISVITIAVTLPRDsytrKKVCWLNWEDSKAL 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 269 DYIYQGPMILVLLINFIFLFNIVRILMTKL-RASTTSETIQYRKAVKATLVLLPLLGIT--YMLFFVNPGEDEVSRVVFI 345
Cdd:cd15254 165 LAFVIPALIIVAVNSIITVVVIVKILRPSIgEKPSKQERSSLFQIIKSIGVLTPLLGLTwgFGLATVIKGSSIVFHILFT 244
                       250       260       270
                ....*....|....*....|....*....|...
gi 19923245 346 YFNsfleSFQGFFVSVFYCFLNSEVRSAIRKRW 378
Cdd:cd15254 245 LLN----AFQGLFILVFGTLWDKKVQEALLNKY 273
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
117-366 1.90e-10

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 61.35  E-value: 1.90e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 117 HVAVIINYLGHCISLV--ALLVAFVLFLRL-RSIRCLRNI--IHWNLISAFILRNATWFV---VQLTMSPevhqsnvGWC 188
Cdd:cd15442   2 QTLVTISSAGCGVSMVflIFTIILYFFLRFtYQKFKSEDApkIHVNLSSSLLLLNLAFLLnsgVSSRAHP-------GLC 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 189 RLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFIC-IGWGvpFPIIVAWAIGKL----YYDNEK------ 257
Cdd:cd15442  75 KALGGVTHYFLLCCFTWMAIEAFHLYLLAIKVFNTYIHHYFAKLClVGWG--FPALVVTITGSInsygAYTIMDmanrtt 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 258 ---CWFgKRPGVYTDYIY-QGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN 333
Cdd:cd15442 153 lhlCWI-NSKHLTVHYITvCGYFGLTFLFNTVVLGLVAWKIFHLQSATAGKEKCQAWKGGLTVLGLSCLLGVTWGLAFFT 231
                       250       260       270
                ....*....|....*....|....*....|...
gi 19923245 334 PGEDEVSRVvfiYFNSFLESFQGFFVSVFYCFL 366
Cdd:cd15442 232 YGSMSVPTV---YIFALLNSLQGLFIFIWFVIL 261
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
122-364 8.56e-10

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 59.00  E-value: 8.56e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 122 INYLGHCISLVALLVAFVLFLRLRSIRCLRNI-IHWNLISAFILRNATWFvvqltMSPEVHQSNVGW-CRLVTAAYNYFH 199
Cdd:cd15443   7 ISIVGCSISAAASLLTILLHFFSRKQPKDSTTrIHMNLLGSLFLLNGSFL-----LSPPLATSQSTWlCRAAAALLHYSL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFIC-IGWGVPFPIIVAWAIGKL-------------YYDNEKCWFgkRPG 265
Cdd:cd15443  82 LCCLTWMAIEGFHLYLLLVKVYNIYIRRYVLKLCvLGWGLPALIVLLVLIFKReaygphtiptgtgYQNASMCWI--TSS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 266 VYTDYIYQGPMILVLLINFIFLFNIVRILmTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGedeVSRVVFI 345
Cdd:cd15443 160 KVHYVLVLGYAGLTSLFNLVVLAWVVRML-RRLRSRKQELGERARRDWVTVLGLTCLLGTTWALAFFSFG---VFLIPQL 235
                       250
                ....*....|....*....
gi 19923245 346 YFNSFLESFQGFFVSVFYC 364
Cdd:cd15443 236 FLFTIINSLYGFFICLWYC 254
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
118-380 9.83e-10

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 59.13  E-value: 9.83e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 118 VAVIINYLGHCISLV---ALLVAFVLFLRLRsiRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHqsnvGWCRLVTAA 194
Cdd:cd15996   3 VLTFITYIGCGISAIfsaATLLTYIAFEKLR--RDYPSKILMNLSTALLFLNLVFLLDGWIASFEID----ELCITVAVL 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 195 YNYFHVTNFFWMFGEGCYLHTAIVLTYSTdRLRKWM--FICIGWGVPFPII----------VAWAIGKLYYDNEK----C 258
Cdd:cd15996  77 LHFFLLATFTWMGLEAIHMYIALVKVFNT-YIRRYIlkFCIIGWGLPALIVsivlastndnYGYGYYGKDKDGQGgdefC 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 259 WFgKRPGVYtdYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYR--KAVKATLVLLPLLGITYMLFFVNPGE 336
Cdd:cd15996 156 WI-KNPVVF--YVTCAAYFGIMFLMNVAMFIVVMVQICGRNGKRSNRTLREEilRNLRSVVSLTFLLGMTWGFAFFAWGP 232
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 19923245 337 DEVSrvvFIYFNSFLESFQGFFVSVFYCFLNSEVrsaiRKRWHR 380
Cdd:cd15996 233 VNLA---FMYLFTIFNSLQGLFIFVFHCALKENV----QKQWRR 269
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
119-367 1.11e-08

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 55.90  E-value: 1.11e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 119 AVIINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSP-EVHQSNVGWCRLVTAAYNY 197
Cdd:cd14964   1 TTIILSLLTCLGLLGNLLVLLSLVRLRKRPRSTRLLLASLAACDLLASLVVLVLFFLLGLtEASSRPQALCYLIYLLWYG 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 198 FHVTNFFWMFGEGCYLHTAI--VLTYSTDRLRKWM--FICIGWGVPF-----PIIVAWAIGKLYYDNEKCWFGKRPGVYT 268
Cdd:cd14964  81 ANLASIWTTLVLTYHRYFALcgPLKYTRLSSPGKTrvIILGCWGVSLllsipPLVGKGAIPRYNTLTGSCYLICTTIYLT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 269 DYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKAT---LVLLPLLGITYMLFFVNPGEDEVSRVVFI 345
Cdd:cd14964 161 WGFLLVSFLLPLVAFLVIFSRIVLRLRRRVRAIRSAASLNTDKNLKATkslLILVITFLLCWLPFSIVFILHALVAAGQG 240
                       250       260
                ....*....|....*....|....*..
gi 19923245 346 -----YFNSFLESFQGFFVSVFYCFLN 367
Cdd:cd14964 241 lnllsILANLLAVLASTLNPFIYCLGN 267
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
121-375 1.63e-07

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 52.13  E-value: 1.63e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 121 IINYLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFilrnatwFVVQLTMSPEVHQSNVGW-CRLVTAAYNYFH 199
Cdd:cd15992   6 TLTWSSVGVTLGFLLLTFLFLLCLRALRSNKTSIRKNGATAL-------FLSELVFILGINQADNPFaCTVIAILLHFFY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 200 VTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPfPIIVAWAIG---KLYYDNEKCWFgkrpGVYTDYIYQ--G 274
Cdd:cd15992  79 LCTFSWLFLEGLHIYRMLSEVRDINYGPMRFYYLIGWGVP-AFITGLAVGldpEGYGNPDFCWL----SIYDTLIWSfaG 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 275 PMILVLLINfIFLFnivrILMTKLRASTTSETIQYRK----AVKATLVLLPLLGITYMLFFVNPGEDEvsrVVFIYFNSF 350
Cdd:cd15992 154 PVAFAVSMN-VFLY----ILSSRASCSAQQQSFEKKKgpvsGLRTAFTVLLLVSVTCLLALLSVNSDV---ILFHYLFAG 225
                       250       260
                ....*....|....*....|....*
gi 19923245 351 LESFQGFFVSVFYCFLNSEVRSAIR 375
Cdd:cd15992 226 FNCLQGPFIFLSHVVLLKEVRKALK 250
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
159-375 5.05e-06

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 47.53  E-value: 5.05e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 159 ISAFILRNATWFVVQLTMSPEVHQSNVgwCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYStdRLRKWMFIC----I 234
Cdd:cd15994  49 IATSLLIADVWFILASIVHNTALNYPL--CVAATFFLHFFYLSLFFWMLTKALLILYGILLVFF--KITKSVFIAtafsI 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 235 GWGVPFPIIV----AWAIGKLYYDNEKCWFgKRPGVYTDYIYQGPMILVLLINFI-FLFNIVRILMTKLRASTTSETIQY 309
Cdd:cd15994 125 GYGCPLVIAVltvaITEPKKGYLRPEACWL-NWDETKALLAFIIPALSIVVVNLIvVGVVVVKTQRSSIGESCKQDVSNI 203
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19923245 310 RKAVKATLVLLPLLGITYMlFFVNPGEDEVSRVVFIYFnSFLESFQGFFVSVFYCFLNSEVRSAIR 375
Cdd:cd15994 204 IRISKNVAILTPLLGLTWG-FGLATIIDSRSLPFHIIF-ALLNAFQGFFILLFGTILDRKIRIALY 267
7tmB2_GPR124-like_Adhesion_III cd15259
orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of ...
231-373 1.88e-04

orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group III adhesion GPCRs include orphan GPR123, GPR124, GPR125, and their closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 also interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Furthermore, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl.


Pssm-ID: 320387 [Multi-domain]  Cd Length: 260  Bit Score: 42.75  E-value: 1.88e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19923245 231 FICIGWGVPFPI--IVAWAIGKLYYDNEKCWFGKRPGVYTDYiyqGPMILVLLINFIFLFNIVRILmtklRASTTSETIQ 308
Cdd:cd15259 122 FYLIGWGIPLIIcgITAAVNLDNYSTYDYCWLAWDPSLGAFY---GPAALIVLVNCIYFLRIYCQL----KGAPVSFQSQ 194
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19923245 309 YRkavkATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSA 373
Cdd:cd15259 195 LR----GAVITLFLYVAMWACGALAVSQRYFLDLVFSCLYGATCSSLGLFVLIHHCLSREDVRQS 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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