NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|119703746|ref|NP_004444|]
View 

electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial isoform 1 precursor [Homo sapiens]

Protein Classification

electron transfer flavoprotein-ubiquinone oxidoreductase( domain architecture ID 11428947)

electron transfer flavoprotein-ubiquinone oxidoreductase accepts electrons from ETF and reduces ubiquinone

CATH:  3.30.70.20|3.30.9.90|3.50.50.60
EC:  1.5.5.1
Gene Ontology:  GO:0004174|GO:0022900|GO:0046872|GO:0051539
SCOP:  4000064|4000127

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 512-615 3.29e-74

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


:

Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 3.29e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  512 GQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKT 591
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 119703746  592 CDIKDPSQNINWVVPEGGGGPAYN 615
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
76-441 3.36e-58

Dehydrogenase (flavoprotein) [Energy production and conversion];


:

Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 196.73  E-value: 3.36e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  76 AGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKEkgAPLNTPVTEDRFGILTEKYr 155
Cdd:COG0644    1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 156 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHddgsvkgiatndvgiqkDGAPKATFERGL 235
Cdd:COG0644   71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 236 ELHAKVTIFAEGCHGHLAKQLYKKFDLRancEPQTYGIGLKELWVIDE-KNWKPGRVDHTVGwplDRHTYGGSFLYHLNE 314
Cdd:COG0644  128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPlEGVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 315 GEplvalgLVVGldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGFQsiPKLTFPGGLLIGCSPGFMNV 394
Cdd:COG0644  202 GR------VSVG---------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 119703746 395 PKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIglhvTEYEDNLKN 441
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
PLN02661 super family cl42517
Putative thiazole synthesis
 28-110 6.38e-03

Putative thiazole synthesis


The actual alignment was detected with superfamily member PLN02661:

Pssm-ID: 455862  Cd Length: 357  Bit Score: 39.04  E-value: 6.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  28 LCATRWSSTSTVPRITTHYTIYP-------RDKDKRWEgVNMERFAEeADVVIVGAGPAGLSAAVRLKQlavahEKDIRV 100
Cdd:PLN02661  47 APARSSSSSSTAPYDLNNFKFAPikesivsREMTRRYM-TDMITYAD-TDVVIVGAGSAGLSCAYELSK-----NPNVKV 119

                         90
                 ....*....|
gi 119703746 101 CLVEKAAQIG 110
Cdd:PLN02661 120 AIIEQSVSPG 129
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 512-615 3.29e-74

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 3.29e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  512 GQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKT 591
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 119703746  592 CDIKDPSQNINWVVPEGGGGPAYN 615
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
76-441 3.36e-58

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 196.73  E-value: 3.36e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  76 AGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKEkgAPLNTPVTEDRFGILTEKYr 155
Cdd:COG0644    1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 156 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHddgsvkgiatndvgiqkDGAPKATFERGL 235
Cdd:COG0644   71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 236 ELHAKVTIFAEGCHGHLAKQLYKKFDLRancEPQTYGIGLKELWVIDE-KNWKPGRVDHTVGwplDRHTYGGSFLYHLNE 314
Cdd:COG0644  128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPlEGVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 315 GEplvalgLVVGldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGFQsiPKLTFPGGLLIGCSPGFMNV 394
Cdd:COG0644  202 GR------VSVG---------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 119703746 395 PKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIglhvTEYEDNLKN 441
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
522-617 3.20e-42

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 146.89  E-value: 3.20e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 522 VALSGTNHEHDQPaHLTLRDDSIPVNRNLsiyDGPEQRFCPAGVYEFVpveqGDGfRLQINAQNCVHCKTCDIKDPSQNI 601
Cdd:COG2440    1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEIV----GDG-RLQINYENCLECGTCRIKCPTQNI 71

                         90
                 ....*....|....*.
gi 119703746 602 NWVVPEGGGGPAYNGM 617
Cdd:COG2440   72 TWVYPEGGGGVNYRFG 87
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 70-441 4.80e-28

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 116.93  E-value: 4.80e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  70 DVVIVGAGPAGLSAAvrlkqLAVAHEkDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKgAPLNTPVTEDRFGI 149
Cdd:PRK10157   7 DAIIVGAGLAGSVAA-----LVLARE-GAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKLAF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 150 LTEKYRIPVPILPGLPMN-NHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLfHDDGSVkgiatndVGIQKDGAPk 228
Cdd:PRK10157  80 MTEKSAMTMDYCNGDETSpSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLV-QRDGKV-------VGVEADGDV- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 229 atfergleLHAKVTIFAEGCHGHLAKQLykkfDLRANCEPQTYGIGLKELW-----VIDEK---NWKPGRVDHTVGWPLD 300
Cdd:PRK10157 151 --------IEAKTVILADGVNSILAEKL----GMAKRVKPTDVAVGVKELIelpksVIEDRfqlQGNQGAACLFAGSPTD 218

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 301 rHTYGGSFLYhlnEGEPLVALGLVVGLDY-QNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTF 379
Cdd:PRK10157 219 -GLMGGGFLY---TNENTLSLGLVCGLHHlHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVG 294

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119703746 380 PGGLLIGCSPGF-MNVP-KIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGlhvtEYEDNLKN 441
Cdd:PRK10157 295 DGVLIAGDAAGMcMNLGfTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLA----EYRQHLES 354
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 70-414 1.09e-11

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 65.80  E-value: 1.09e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746   70 DVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKekgAPLNTPVTEDRFGI 149
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLAD------KGLRVLLLEKKSFPRYKPCGGA-LSPRALEELDLPGE---LIVNLVRGARFFSP 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  150 LTEKYRIPVPILPGlpmnnhgnYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATndvgiqkdgapka 229
Cdd:TIGR02032  72 NGDSVEIPIETELA--------YVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRG------------- 130

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  230 tfeRGLELHAKVTIFAEGCHGHLAKQLykkfDLRAncEPQTYGIGLKELWVI--DEKNWKPGRVDhtvgwpLDRHTYGGS 307
Cdd:TIGR02032 131 ---SEGTVTAKIVIGADGSRSIVAKKL----GLKK--EPREYGVAARAEVEMpdEEVDEDFVEVY------IDRGIVPGG 195

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  308 FLYHLNEGEPLVALGLVVGLDYQnpYLSPFREFQRW-KHHPSIR--PTLE---GGKRIAYGARALNEGGFqsipkltfpg 381
Cdd:TIGR02032 196 YGWVFPKGDGTANVGVGSRSAEE--GEDPKKYLKDFlARRPELKdaETVEvcgALIPIGRPDEKLVRGNV---------- 263

                         330       340       350
                  ....*....|....*....|....*....|...
gi 119703746  382 gLLIGCSPGFMNVPKIKGTHTAMKSGILAAESI 414
Cdd:TIGR02032 264 -LLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 70-256 2.47e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 53.45  E-value: 2.47e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746   70 DVVIVGAGPAGLSAAVRlkqlavAHEKDIRVCLVEKAAQIGAHT-LSGACLD-PG------------AFKELF------- 128
Cdd:pfam00890   1 DVLVIGGGLAGLAAALA------AAEAGLKVAVVEKGQPFGGATaWSSGGIDaLGnppqggidspelHPTDTLkgldela 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  129 -PDW---------------KEKGAPLNTpvTED------RFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHlvswmgEQ 186
Cdd:pfam00890  75 dHPYveafveaapeavdwlEALGVPFSR--TEDghldlrPLGGLSATWRTPHDAADRRRGLGTGHALLARLL------EG 146

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119703746  187 AEALGVEVYPGYAAAEVLfHDDGSVKGIAtndVGIQKDGapkatfeRGLELHAKV-TIFAEGCHGHLAKQL 256
Cdd:pfam00890 147 LRKAGVDFQPRTAADDLI-VEDGRVTGAV---VENRRNG-------REVRIRAIAaVLLATGGFGRLAELL 206
PLN02661 PLN02661
Putative thiazole synthesis
 28-110 6.38e-03

Putative thiazole synthesis


Pssm-ID: 178267  Cd Length: 357  Bit Score: 39.04  E-value: 6.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  28 LCATRWSSTSTVPRITTHYTIYP-------RDKDKRWEgVNMERFAEeADVVIVGAGPAGLSAAVRLKQlavahEKDIRV 100
Cdd:PLN02661  47 APARSSSSSSTAPYDLNNFKFAPikesivsREMTRRYM-TDMITYAD-TDVVIVGAGSAGLSCAYELSK-----NPNVKV 119

                         90
                 ....*....|
gi 119703746 101 CLVEKAAQIG 110
Cdd:PLN02661 120 AIIEQSVSPG 129
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 512-615 3.29e-74

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 3.29e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  512 GQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKT 591
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 119703746  592 CDIKDPSQNINWVVPEGGGGPAYN 615
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
76-441 3.36e-58

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 196.73  E-value: 3.36e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  76 AGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKEkgAPLNTPVTEDRFGILTEKYr 155
Cdd:COG0644    1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 156 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHddgsvkgiatndvgiqkDGAPKATFERGL 235
Cdd:COG0644   71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 236 ELHAKVTIFAEGCHGHLAKQLYKKFDLRancEPQTYGIGLKELWVIDE-KNWKPGRVDHTVGwplDRHTYGGSFLYHLNE 314
Cdd:COG0644  128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPlEGVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 315 GEplvalgLVVGldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGFQsiPKLTFPGGLLIGCSPGFMNV 394
Cdd:COG0644  202 GR------VSVG---------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 119703746 395 PKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIglhvTEYEDNLKN 441
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
522-617 3.20e-42

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 146.89  E-value: 3.20e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 522 VALSGTNHEHDQPaHLTLRDDSIPVNRNLsiyDGPEQRFCPAGVYEFVpveqGDGfRLQINAQNCVHCKTCDIKDPSQNI 601
Cdd:COG2440    1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEIV----GDG-RLQINYENCLECGTCRIKCPTQNI 71

                         90
                 ....*....|....*.
gi 119703746 602 NWVVPEGGGGPAYNGM 617
Cdd:COG2440   72 TWVYPEGGGGVNYRFG 87
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 70-441 4.80e-28

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 116.93  E-value: 4.80e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  70 DVVIVGAGPAGLSAAvrlkqLAVAHEkDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKgAPLNTPVTEDRFGI 149
Cdd:PRK10157   7 DAIIVGAGLAGSVAA-----LVLARE-GAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKLAF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 150 LTEKYRIPVPILPGLPMN-NHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLfHDDGSVkgiatndVGIQKDGAPk 228
Cdd:PRK10157  80 MTEKSAMTMDYCNGDETSpSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLV-QRDGKV-------VGVEADGDV- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 229 atfergleLHAKVTIFAEGCHGHLAKQLykkfDLRANCEPQTYGIGLKELW-----VIDEK---NWKPGRVDHTVGWPLD 300
Cdd:PRK10157 151 --------IEAKTVILADGVNSILAEKL----GMAKRVKPTDVAVGVKELIelpksVIEDRfqlQGNQGAACLFAGSPTD 218

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 301 rHTYGGSFLYhlnEGEPLVALGLVVGLDY-QNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTF 379
Cdd:PRK10157 219 -GLMGGGFLY---TNENTLSLGLVCGLHHlHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVG 294

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119703746 380 PGGLLIGCSPGF-MNVP-KIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGlhvtEYEDNLKN 441
Cdd:PRK10157 295 DGVLIAGDAAGMcMNLGfTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLA----EYRQHLES 354
PRK10015 PRK10015
oxidoreductase; Provisional
 67-454 8.11e-27

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 113.53  E-value: 8.11e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  67 EEADVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKgAPLNTPVTEDR 146
Cdd:PRK10015   4 DKFDAIVVGAGVAGSVAAL------VMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREK 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 147 FGILTEKYRIPVPI---LPGLPmnNHGNYIVRLGHLVSWMGEQAEALGVEVYPGyAAAEVLFHDDGSVKGI-ATNDVgiq 222
Cdd:PRK10015  77 ISFLTEESAVTLDFhreQPDVP--QHASYTVLRNRLDPWLMEQAEQAGAQFIPG-VRVDALVREGNKVTGVqAGDDI--- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 223 kdgapkatfergleLHAKVTIFAEGCHGHLAKQLykkfDLRANCEPQTYGIGLKELW-----VIDEK---NWKPGRVDHT 294
Cdd:PRK10015 151 --------------LEANVVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIgltpeQINDRfniTGEEGAAWLF 212

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 295 VGWPLDrHTYGGSFLYhlnEGEPLVALGLVVGL-DYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQS 373
Cdd:PRK10015 213 AGSPSD-GLMGGGFLY---TNKDSISLGLVCGLgDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 374 IPKLTFPGGLLIGCSPGF-MNVP-KIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGlhvtEYEDNLKNSWVWKELYSV 451
Cdd:PRK10015 289 VPQLVNDGVMIVGDAAGFcLNLGfTVRGMDLAIASAQAAATTVIAAKERADFSASSLA----QYKRELEQSCVMRDMQHF 364


                 ...
gi 119703746 452 RNI 454
Cdd:PRK10015 365 RKI 367
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 67-254 5.24e-13

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 71.40  E-value: 5.24e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  67 EEADVVIVGAGPAGLSAAVRlkqlavAHEKDIRVCLVEKAAQIGAHT-LSGacldpGAF----------------KELFP 129
Cdd:COG1053    2 HEYDVVVVGSGGAGLRAALE------AAEAGLKVLVLEKVPPRGGHTaAAQ-----GGInaagtnvqkaagedspEEHFY 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 130 DWKEKGAPLNTPvteDRFGILTEK---------------YRIPVPILPGLPMNNHGNYI---VRLGH-LVSWMGEQAEAL 190
Cdd:COG1053   71 DTVKGGDGLADQ---DLVEALAEEapeaidwleaqgvpfSRTPDGRLPQFGGHSVGRTCyagDGTGHaLLATLYQAALRL 147

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119703746 191 GVEVYPGYAAAEvLFHDDGSVKGIatndVGIQKDGAPKAtfergleLHAKVTIFAEGCHGHLAK 254
Cdd:COG1053  148 GVEIFTETEVLD-LIVDDGRVVGV----VARDRTGEIVR-------IRAKAVVLATGGFGRNYE 199
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 66-256 1.49e-12

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 68.81  E-value: 1.49e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  66 AEEADVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG----AHTLSGACLDpgAFKEL--FPDWKEKGAPLN 139
Cdd:COG0654    1 MMRTDVLIVGGGPAGLALALALAR------AGIRVTVVERAPPPRpdgrGIALSPRSLE--LLRRLglWDRLLARGAPIR 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 140 T-PVTEDRFGilTEKYRIPVPILPGLPMnnhgnYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGsvkgiatnd 218
Cdd:COG0654   73 GiRVRDGSDG--RVLARFDAAETGLPAG-----LVVPRADLERALLEAARALGVELRFGTEVTGLEQDADG--------- 136

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 119703746 219 vgiqkdgaPKATFERGLELHAKVTIFAEGCHGHLAKQL 256
Cdd:COG0654  137 --------VTVTLADGRTLRADLVVGADGARSAVRRLL 166
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 70-414 1.09e-11

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 65.80  E-value: 1.09e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746   70 DVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKekgAPLNTPVTEDRFGI 149
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLAD------KGLRVLLLEKKSFPRYKPCGGA-LSPRALEELDLPGE---LIVNLVRGARFFSP 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  150 LTEKYRIPVPILPGlpmnnhgnYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATndvgiqkdgapka 229
Cdd:TIGR02032  72 NGDSVEIPIETELA--------YVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRG------------- 130

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  230 tfeRGLELHAKVTIFAEGCHGHLAKQLykkfDLRAncEPQTYGIGLKELWVI--DEKNWKPGRVDhtvgwpLDRHTYGGS 307
Cdd:TIGR02032 131 ---SEGTVTAKIVIGADGSRSIVAKKL----GLKK--EPREYGVAARAEVEMpdEEVDEDFVEVY------IDRGIVPGG 195

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  308 FLYHLNEGEPLVALGLVVGLDYQnpYLSPFREFQRW-KHHPSIR--PTLE---GGKRIAYGARALNEGGFqsipkltfpg 381
Cdd:TIGR02032 196 YGWVFPKGDGTANVGVGSRSAEE--GEDPKKYLKDFlARRPELKdaETVEvcgALIPIGRPDEKLVRGNV---------- 263

                         330       340       350
                  ....*....|....*....|....*....|...
gi 119703746  382 gLLIGCSPGFMNVPKIKGTHTAMKSGILAAESI 414
Cdd:TIGR02032 264 -LLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 70-256 2.47e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 53.45  E-value: 2.47e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746   70 DVVIVGAGPAGLSAAVRlkqlavAHEKDIRVCLVEKAAQIGAHT-LSGACLD-PG------------AFKELF------- 128
Cdd:pfam00890   1 DVLVIGGGLAGLAAALA------AAEAGLKVAVVEKGQPFGGATaWSSGGIDaLGnppqggidspelHPTDTLkgldela 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  129 -PDW---------------KEKGAPLNTpvTED------RFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHlvswmgEQ 186
Cdd:pfam00890  75 dHPYveafveaapeavdwlEALGVPFSR--TEDghldlrPLGGLSATWRTPHDAADRRRGLGTGHALLARLL------EG 146

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119703746  187 AEALGVEVYPGYAAAEVLfHDDGSVKGIAtndVGIQKDGapkatfeRGLELHAKV-TIFAEGCHGHLAKQL 256
Cdd:pfam00890 147 LRKAGVDFQPRTAADDLI-VEDGRVTGAV---VENRRNG-------REVRIRAIAaVLLATGGFGRLAELL 206
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 70-123 4.85e-07

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 52.54  E-value: 4.85e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 119703746  70 DVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG--AHTLS--GACLDPGA 123
Cdd:COG1233    5 DVVVIGAGIGGLAAAALLAR------AGYRVTVLEKNDTPGgrARTFErpGFRFDVGP 56
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 70-123 5.12e-07

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 52.53  E-value: 5.12e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 119703746  70 DVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKAAQIG----AHTLSGACLDPGA 123
Cdd:COG1232    3 RVAVIGGGIAGLTAAYRLAKA------GHEVTVLEASDRVGglirTVEVDGFRIDRGP 54
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 68-256 7.56e-07

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 51.56  E-value: 7.56e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746   68 EADVVIVGAGPAGLSAAVRLkqlavaHEKDIRVCLVEKAAqiGAHTLSGAC-LDPGAFkELFPD------WKEKGAPlnt 140
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLL------ARAGVRVVLVERHA--TTSVLPRAHgLNQRTM-ELLRQagledrILAEGVP--- 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  141 pvtEDRFGILTEKYRIPV---PILPGLPMNNHG-NYIVRLghlvswMGEQAEALGVEVYPGyaaAEVLF--HDDGSVKGI 214
Cdd:pfam01494  69 ---HEGMGLAFYNTRRRAdldFLTSPPRVTVYPqTELEPI------LVEHAEARGAQVRFG---TEVLSleQDGDGVTAV 136

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 119703746  215 ATNdvgiQKDGApkatferGLELHAKVTIFAEGCHGHLAKQL 256
Cdd:pfam01494 137 VRD----RRDGE-------EYTVRAKYLVGCDGGRSPVRKTL 167
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 68-217 9.16e-07

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 50.16  E-value: 9.16e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746   68 EADVVIVGAGPAGLSAAVRLkqlavAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKElfpdwKEKGAPLntpvteDRF 147
Cdd:pfam01946  17 ESDVVIVGAGSSGLTAAYYL-----AKNRGLKVAIIERSVSPGGGAWLGGQLFSAMVVR-----KPAHLFL------DEF 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119703746  148 GIltekyripvpilpglPMNNHGNYIVrLGHLVSWMGEQAEAL----GVEVYPGYAAAEVLFHDDGSVKGIATN 217
Cdd:pfam01946  81 GI---------------PYEDEGDYVV-VKHAALFTSTLMSKAlqlpNVKLFNATSVEDLIVRPGVGVAGVVTN 138
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 66-120 1.22e-06

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 51.02  E-value: 1.22e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 119703746  66 AEEADVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKAAQIG----AHTLSGACLD 120
Cdd:COG2072    4 TEHVDVVVIGAGQAGLAAAYHLRRA------GIDFVVLEKADDVGgtwrDNRYPGLRLD 56
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
67-117 2.00e-06

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 50.53  E-value: 2.00e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 119703746  67 EEADVVIVGAGPAGLSAAVRLKQLavaheKDIRVCLVEKAAQIGAHTlSGA 117
Cdd:COG0579    3 EMYDVVIIGAGIVGLALARELSRY-----EDLKVLVLEKEDDVAQES-SGN 47
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
62-123 2.96e-06

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 49.92  E-value: 2.96e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 119703746  62 MERFAEEADVVIVGAGPAGLSAAVRLKQLAVahekdiRVCLVEKAAQIG--AHTLSGAC----LDPGA 123
Cdd:COG1231    1 MSRRARGKDVVIVGAGLAGLAAARELRKAGL------DVTVLEARDRVGgrVWTLRFGDdglyAELGA 62
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 66-212 3.08e-06

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 50.09  E-value: 3.08e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  66 AEEADVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKaaqigaHTLSGACL-----------DPGAFKELFPDWKEk 134
Cdd:COG1249    1 MKDYDLVVIGAGPGGYVAAIRAAQL------GLKVALVEK------GRLGGTCLnvgcipskallHAAEVAHEARHAAE- 67

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 119703746 135 gaplntpvtedrFGILTEKYRIPVPilpglPMNNHGNYIVrlGHLVSWMGEQAEALGVEVYPGYAAaevlFHDDGSVK 212
Cdd:COG1249   68 ------------FGISAGAPSVDWA-----ALMARKDKVV--DRLRGGVEELLKKNGVDVIRGRAR----FVDPHTVE 122
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
70-135 3.25e-06

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 49.49  E-value: 3.25e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 119703746  70 DVVIVGAGPAGLSAAVRLkqlavaHEKDIRVCLVEKAAQIG----AHTLSGACLDPGA---------FKELFPDWKEKG 135
Cdd:COG3380    5 DIAIIGAGIAGLAAARAL------QDAGHEVTVFEKSRGVGgrmaTRRLDGGRFDHGAqyftardprFQALVEEWLAAG 77
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
67-268 3.38e-06

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 49.52  E-value: 3.38e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  67 EEADVVIVGAGPAGLSAAVRLkqlavaHEKDIRVCLVEkAAQIGAHTlSGAC-------LDPGAFKELFP---------- 129
Cdd:COG0665    1 ATADVVVIGGGIAGLSTAYHL------ARRGLDVTVLE-RGRPGSGA-SGRNagqlrpgLAALADRALVRlarealdlwr 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 130 ----------DWKEKGApLNTPVTEDRFGILTEKYR------IPVPIL---------PGLPMNN--HGNYIVRLGH---- 178
Cdd:COG0665   73 elaaelgidcDFRRTGV-LYLARTEAELAALRAEAEalralgLPVELLdaaelrerePGLGSPDyaGGLYDPDDGHvdpa 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 179 -LVSWMGEQAEALGVEVYPGYAAAEVLfHDDGSVKGIATndvgiqkdgapkatfERGlELHAKVTIFAEGCHghlAKQLY 257
Cdd:COG0665  152 kLVRALARAARAAGVRIREGTPVTGLE-REGGRVTGVRT---------------ERG-TVRADAVVLAAGAW---SARLL 211

                        250
                 ....*....|.
gi 119703746 258 KKFDLRANCEP 268
Cdd:COG0665  212 PMLGLRLPLRP 222
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 70-209 9.45e-06

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 48.16  E-value: 9.45e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746   70 DVVIVGAGPAGLSAAVRLKqlavahEKDIRVCLVEKAAQIGAHTlSGA----------CLDPGAFKELF----------- 128
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELA------RRGLSVTLLERGDDPGSGA-SGRnaglihpglrYLEPSELARLAlealdlweele 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  129 ------PDWKEKGA-PLNTPVTEDRFGILTE---KYRIPVPIL---------PGLPMNNHGNYIVRLGH-----LVSWMG 184
Cdd:pfam01266  74 eelgidCGFRRCGVlVLARDEEEEALEKLLAalrRLGVPAELLdaeelrelePLLPGLRGGLFYPDGGHvdparLLRALA 153

                         170       180
                  ....*....|....*....|....*
gi 119703746  185 EQAEALGVEVYPGYAAAEVLFHDDG 209
Cdd:pfam01266 154 RAAEALGVRIIEGTEVTGIEEEGGV 178
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
70-147 1.13e-05

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 48.03  E-value: 1.13e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  70 DVVIVGAGPAGLSAAVrlkQLAVAHEKDIRVCLVEKAAQIGA----HTLSGACL-------------DPGAFKelfpDW- 131
Cdd:COG4529    7 RIAIIGGGASGTALAI---HLLRRAPEPLRITLFEPRPELGRgvaySTDSPEHLlnvpagrmsafpdDPDHFL----RWl 79

                         90
                 ....*....|....*.
gi 119703746 132 KEKGAPLNTPVTEDRF 147
Cdd:COG4529   80 RENGARAAPAIDPDAF 95
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
70-249 2.97e-05

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 46.27  E-value: 2.97e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  70 DVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAqigahtlsgacldPGafkelfpdwkekGAPLNTPVTEDRFGi 149
Cdd:COG0492    2 DVVIIGAGPAGLTAAI------YAARAGLKTLVIEGGE-------------PG------------GQLATTKEIENYPG- 49

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 150 ltekyrIPVPIL-PGLpMNNhgnyivrlghlvswMGEQAEALGVEVYPGyaaaEVlfhddgsvkgiatndVGIQKDGAPK 228
Cdd:COG0492   50 ------FPEGISgPEL-AER--------------LREQAERFGAEILLE----EV---------------TSVDKDDGPF 89

                        170       180
                 ....*....|....*....|..
gi 119703746 229 -ATFERGLELHAKVTIFAEGCH 249
Cdd:COG0492   90 rVTTDDGTEYEAKAVIIATGAG 111
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 70-149 3.93e-05

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 45.77  E-value: 3.93e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746   70 DVVIVGAGPAGLSAAVRLKQlavaHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKGAPLNTPVTEDRFGI 149
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTLAQ----LGGKVTLIEDEGTCPYGGCVLSKALLGAAEAPEIASLWADLYKRKEEVVKKLNNGI 77
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
66-109 4.38e-05

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 46.44  E-value: 4.38e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 119703746  66 AEEADVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQI 109
Cdd:PRK06183   8 AHDTDVVIVGAGPVGLTLANLLGQ------YGVRVLVLERWPTL 45
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
73-115 5.75e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 41.36  E-value: 5.75e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 119703746   73 IVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLS 115
Cdd:pfam13450   1 IVGAGLAGLVAAALLAK------RGFRVLVLEKRDRLGGNAYS 37
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 67-119 6.56e-05

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 45.55  E-value: 6.56e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 119703746  67 EEADVVIVGAGPAGLSAAVRLKQlavaHEKdiRVCLVEKAaqigahTLSGACL 119
Cdd:PRK06292   2 EKYDVIVIGAGPAGYVAARRAAK----LGK--KVALIEKG------PLGGTCL 42
PRK08294 PRK08294
phenol 2-monooxygenase; Provisional
 50-105 8.94e-05

phenol 2-monooxygenase; Provisional


Pssm-ID: 236223 [Multi-domain]  Cd Length: 634  Bit Score: 45.36  E-value: 8.94e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 119703746  50 PRDKDKRWEGVNM-ERFAEEADVVIVGAGPAGLSAAVRLKQLAvahekDIRVCLVEK 105
Cdd:PRK08294  13 PRIQPAAGRGINRpADLPDEVDVLIVGCGPAGLTLAAQLSAFP-----DITTRIVER 64
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 65-119 1.13e-04

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 45.14  E-value: 1.13e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 119703746  65 FAEEADVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKAaqigahTLSGACL 119
Cdd:PRK06416   1 FAFEYDVIVIGAGPGGYVAAIRAAQL------GLKVAIVEKE------KLGGTCL 43
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
66-117 1.44e-04

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 44.64  E-value: 1.44e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 119703746  66 AEEADVVIVGAGPAGLSAAvrlkqLAVAHeKDIRVCLVEKAAQIGAHTL-SGA 117
Cdd:PRK07843   5 VQEYDVVVVGSGAAGMVAA-----LTAAH-RGLSTVVVEKAPHYGGSTArSGG 51
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 70-110 1.95e-04

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 44.07  E-value: 1.95e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 119703746  70 DVVIVGAGPAGLSAAVRLKqlavahEKDIRVCLVEKAAQIG 110
Cdd:COG3349    5 RVVVVGGGLAGLAAAVELA------EAGFRVTLLEARPRLG 39
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
70-105 1.96e-04

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 44.33  E-value: 1.96e-04
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 119703746  70 DVVIVGAGPAGLSAAVRLKqlavahEKDIRVCLVEK 105
Cdd:COG2509   32 DVVIVGAGPAGLFAALELA------EAGLKPLVLER 61
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
 70-104 4.15e-04

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 43.17  E-value: 4.15e-04
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 119703746   70 DVVIVGAGPAGLSAAVRLkqlaVAHEKDIRVCLVE 104
Cdd:pfam05834   1 DVVIIGAGPAGLSLAARL----AAAKPGLSVVLIE 31
PRK06134 PRK06134
putative FAD-binding dehydrogenase; Reviewed
 65-116 5.16e-04

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 180419 [Multi-domain]  Cd Length: 581  Bit Score: 43.17  E-value: 5.16e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 119703746  65 FAEEADVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAQIGAHT-LSG 116
Cdd:PRK06134   9 PDLECDVLVIGSGAAGLSAAV------TAAWHGLKVIVVEKDPVFGGTTaWSG 55
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
72-110 5.20e-04

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 42.73  E-value: 5.20e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 119703746  72 VIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG 110
Cdd:COG2081    1 IVIGAGAAGLMAAITAAE------RGARVLLLEKNPKVG 33
HI0933_like pfam03486
HI0933-like protein;
70-110 6.52e-04

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 42.57  E-value: 6.52e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 119703746   70 DVVIVGAGPAGLSAAvrlkqlAVAHEKDIRVCLVEKAAQIG 110
Cdd:pfam03486   2 DVIVIGGGAAGLMAA------ISAAKRGRRVLLIEKGKKLG 36
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
70-112 6.81e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 42.54  E-value: 6.81e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 119703746  70 DVVIVGAGPAGLSAAvrlkqLAVAhEKDIRVCLVEKAAQIGAH 112
Cdd:COG1148  142 RALVIGGGIAGMTAA-----LELA-EQGYEVYLVEKEPELGGR 178
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
68-107 6.89e-04

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 42.60  E-value: 6.89e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 119703746  68 EADVVIVGAGPAGLSAAVRLKQLAvaheKDIRVCLVEKAA 107
Cdd:PRK06854  11 DTDILIIGGGMAGCGAAFEAKEWA----PDLKVLIVEKAN 46
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 71-110 8.92e-04

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 42.14  E-value: 8.92e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 119703746  71 VVIVGAGPAGLSAAVRLKQLavahEKDIRVCLVEKAAQIG 110
Cdd:PRK11883   3 VAIIGGGITGLSAAYRLHKK----GPDADITLLEASDRLG 38
PRK07804 PRK07804
L-aspartate oxidase; Provisional
 67-108 9.31e-04

L-aspartate oxidase; Provisional


Pssm-ID: 236102 [Multi-domain]  Cd Length: 541  Bit Score: 42.27  E-value: 9.31e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 119703746  67 EEADVVIVGAGPAGLSAAVRlkqlavAHEKDIRVCLVEKAAQ 108
Cdd:PRK07804  15 DAADVVVVGSGVAGLTAALA------ARRAGRRVLVVTKAAL 50
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 68-119 9.56e-04

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 41.99  E-value: 9.56e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 119703746  68 EADVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAQIGAHT-LSGACL 119
Cdd:PRK12842   9 TCDVLVIGSGAGGLSAAI------TARKLGLDVVVLEKEPVFGGTTaFSGGVL 55
PRK09126 PRK09126
FAD-dependent hydroxylase;
70-107 1.08e-03

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 41.85  E-value: 1.08e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 119703746  70 DVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKAA 107
Cdd:PRK09126   5 DIVVVGAGPAGLSFARSLAGS------GLKVTLIERQP 36
sdhA PRK06069
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
62-115 1.28e-03

succinate dehydrogenase/fumarate reductase flavoprotein subunit;


Pssm-ID: 235689 [Multi-domain]  Cd Length: 577  Bit Score: 41.58  E-value: 1.28e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 119703746  62 MERFaeEADVVIVGAGPAGLSAAVrlkQLAVAHEKDIRVCLVEKAAQIGAHTLS 115
Cdd:PRK06069   1 MEVL--KYDVVIVGSGLAGLRAAV---AAAERSGGKLSVAVVSKTQPMRSHSVS 49
PRK06847 PRK06847
hypothetical protein; Provisional
 70-209 1.47e-03

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 41.40  E-value: 1.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  70 DVVIVGAGPAGLSAAVRLKQLAVAhekdirVCLVEKA---AQIGAH-TLSGACLDpgAFKEL--FPDWKEKGAPLNTPVT 143
Cdd:PRK06847   6 KVLIVGGGIGGLSAAIALRRAGIA------VDLVEIDpewRVYGAGiTLQGNALR--ALRELgvLDECLEAGFGFDGVDL 77

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746 144 EDRFGILTekYRIPVPIL--PGLPMNNHgnyIVR--LGHLvswMGEQAEALGVEVYPGYAAAEVLFHDDG 209
Cdd:PRK06847  78 FDPDGTLL--AELPTPRLagDDLPGGGG---IMRpaLARI---LADAARAAGADVRLGTTVTAIEQDDDG 139
PRK07233 PRK07233
hypothetical protein; Provisional
 71-110 1.73e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 41.03  E-value: 1.73e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 119703746  71 VVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG 110
Cdd:PRK07233   2 IAIVGGGIAGLAAAYRLAK------RGHEVTVFEADDQLG 35
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 67-104 1.79e-03

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 41.35  E-value: 1.79e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 119703746  67 EEADVVIVGAGPAGLSAAVRLkqlavAHEKDIRVCLVE 104
Cdd:COG2303    3 EEYDYVIVGAGSAGCVLANRL-----SEDAGLRVLLLE 35
PRK07208 PRK07208
hypothetical protein; Provisional
 70-110 2.18e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 41.03  E-value: 2.18e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 119703746  70 DVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG 110
Cdd:PRK07208   6 SVVIIGAGPAGLTAAYELLK------RGYPVTVLEADPVVG 40
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 71-110 2.46e-03

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 40.53  E-value: 2.46e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 119703746  71 VVIVGAGPAGLSAAvrlKQLAVA-HEkdirVCLVEKAAQIG 110
Cdd:PRK12810 146 VAVVGSGPAGLAAA---DQLARAgHK----VTVFERADRIG 179
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 67-107 2.52e-03

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 40.86  E-value: 2.52e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 119703746  67 EEADVVIVGAGPAGLSAAVRLKQLAvahekdiRVCLVEKAA 107
Cdd:COG0029    3 LKTDVLVIGSGIAGLSAALKLAERG-------RVTLLTKGE 36
PRK12843 PRK12843
FAD-dependent oxidoreductase;
58-117 2.84e-03

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 40.49  E-value: 2.84e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119703746  58 EGVNMERFAEEADVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAQIGAHT-LSGA 117
Cdd:PRK12843   6 SELSPERWDAEFDVIVIGAGAAGMSAAL------FAAIAGLKVLLVERTEYVGGTTaTSAG 60
PRK06370 PRK06370
FAD-containing oxidoreductase;
62-122 2.87e-03

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 40.57  E-value: 2.87e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119703746  62 MERFaeeaDVVIVGAGPAGLSAAVRLKQLAvahekdIRVCLVEKaaqigaHTLSGACLDPG 122
Cdd:PRK06370   3 AQRY----DAIVIGAGQAGPPLAARAAGLG------MKVALIER------GLLGGTCVNTG 47
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
68-120 3.08e-03

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 40.22  E-value: 3.08e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 119703746  68 EADVVIVGAGPAGLSAAVRLKqlavahEKDIRVCLVEKAaqIGAHTLSGACLD 120
Cdd:PRK05329   2 KFDVLVIGGGLAGLTAALAAA------EAGKRVALVAKG--QGALHFSSGSID 46
PRK06481 PRK06481
flavocytochrome c;
67-114 4.10e-03

flavocytochrome c;


Pssm-ID: 180584 [Multi-domain]  Cd Length: 506  Bit Score: 40.20  E-value: 4.10e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 119703746  67 EEADVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTL 114
Cdd:PRK06481  60 DKYDIVIVGAGGAGMSAAIEAKD------AGMNPVILEKMPVAGGNTM 101
PLN02661 PLN02661
Putative thiazole synthesis
 28-110 6.38e-03

Putative thiazole synthesis


Pssm-ID: 178267  Cd Length: 357  Bit Score: 39.04  E-value: 6.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119703746  28 LCATRWSSTSTVPRITTHYTIYP-------RDKDKRWEgVNMERFAEeADVVIVGAGPAGLSAAVRLKQlavahEKDIRV 100
Cdd:PLN02661  47 APARSSSSSSTAPYDLNNFKFAPikesivsREMTRRYM-TDMITYAD-TDVVIVGAGSAGLSCAYELSK-----NPNVKV 119

                         90
                 ....*....|
gi 119703746 101 CLVEKAAQIG 110
Cdd:PLN02661 120 AIIEQSVSPG 129
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 71-110 7.34e-03

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 39.47  E-value: 7.34e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 119703746  71 VVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG 110
Cdd:PRK08132  26 VVVVGAGPVGLALAIDLAQ------QGVPVVLLDDDDTLS 59
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
70-118 7.46e-03

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 38.98  E-value: 7.46e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 119703746  70 DVVIVGAGPAGLSAAVrlkQLAVAHEkdiRVCLVEKAAQIGahtlsGAC 118
Cdd:PRK05249   7 DLVVIGSGPAGEGAAM---QAAKLGK---RVAVIERYRNVG-----GGC 44
Fer4_7 pfam12838
4Fe-4S dicluster domain; Superfamily includes proteins containing domains which bind to ...
 561-592 7.96e-03

4Fe-4S dicluster domain; Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.


Pssm-ID: 463724 [Multi-domain]  Cd Length: 51  Bit Score: 34.81  E-value: 7.96e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 119703746  561 CPAGVYEFVPVEQGDG-FRLQINAQNCVHCKTC 592
Cdd:pfam12838  11 CPVGAITLDEVGEKKGtKTVVIDPERCVGCGAC 43
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 70-110 9.21e-03

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 38.74  E-value: 9.21e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 119703746   70 DVVIVGAGPAGLSAAVRLKQLAVahekdiRVCLVEKAAQIG 110
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGA------KVLLVERRGFLG 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH