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Conserved domains on  [gi|21493022|ref|NP_005091|]
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A-kinase anchor protein 12 isoform 1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
rne super family cl35953
ribonuclease E; Reviewed
883-1085 3.86e-08

ribonuclease E; Reviewed


The actual alignment was detected with superfamily member PRK10811:

Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 58.51  E-value: 3.86e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   883 ELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVlereVIAEEEPPTVTEPLPENREARG 962
Cdd:PRK10811  857 EQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV----VVETTHPEVIAAPVTEQPQVIT 932
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   963 DTVVSEAELTPEAVTAAETAgplgAEEGTEASAAEETTEMVSAVSQLTDSPDttEEATPVQEVEGGVPDIEEQERRTQEV 1042
Cdd:PRK10811  933 ESDVAVAQEVAEHAEPVVEP----QDETADIEEAAETAEVVVAEPEVVAQPA--APVVAEVAAEVETVTAVEPEVAPAQV 1006
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 21493022  1043 LQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASG 1085
Cdd:PRK10811 1007 PEATVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKG 1049
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
605-633 2.97e-06

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


:

Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 45.33  E-value: 2.97e-06
                           10        20
                   ....*....|....*....|....*....
gi 21493022    605 EGVTPWASFKKMVTPKKRVRRPSESDKED 633
Cdd:pfam03832    1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
PTZ00121 super family cl31754
MAEBL; Provisional
311-965 1.26e-05

MAEBL; Provisional


The actual alignment was detected with superfamily member PTZ00121:

Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 50.52  E-value: 1.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   311 TSFRKPKEDEVEASEKKKEQEPEKVDT---EEDGKAEVA---SEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQ 384
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETgkaEEARKAEEAkkkAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   385 VSGSQGPSEEKPAPLATEVFDEKIEVHQ-EEVVAEVHVSTVEE--------RTEE-QKTEVEETAGSVPAEELVEMDAEP 454
Cdd:PTZ00121 1162 DARKAEEARKAEDAKKAEAARKAEEVRKaEELRKAEDARKAEAarkaeeerKAEEaRKAEDAKKAEAVKKAEEAKKDAEE 1241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   455 ---QEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLS---KPPEGVVSEVEMLSSQERMKV-----------QGSPLK 517
Cdd:PTZ00121 1242 akkAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAdelKKAEEKKKADEAKKAEEKKKAdeakkkaeeakKADEAK 1321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   518 KLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGAT 597
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAE 1401
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   598 SDGEKKREGVTPWASFKKMVTPKKR---VRRPSESDKEDElDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRKVD 674
Cdd:PTZ00121 1402 EDKKKADELKKAAAAKKKADEAKKKaeeKKKADEAKKKAE-EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAE 1480
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   675 TSVSWEALICVGSSKKRARRGSSSDEEGGPKA----MGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSP 750
Cdd:PTZ00121 1481 EAKKADEAKKKAEEAKKKADEAKKAAEAKKKAdeakKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA 1560
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   751 TE---GEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESWVSIK-----KFIPGRRKKRPDGK 822
Cdd:PTZ00121 1561 EEkkkAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKaeelkKAEEEKKKVEQLKK 1640
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   823 QEQAPVEDAGPTGANEDDSDVPAVvplSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRA 902
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAA---EEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 21493022   903 ATII----EERSPSWISASVTEPLEQVEAEAA------------LLTEEVLEREVIAEEEPPTVTEPLPENREARGDTV 965
Cdd:PTZ00121 1718 AEELkkaeEENKIKAEEAKKEAEEDKKKAEEAkkdeeekkkiahLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEV 1796
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
883-1085 3.86e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 58.51  E-value: 3.86e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   883 ELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVlereVIAEEEPPTVTEPLPENREARG 962
Cdd:PRK10811  857 EQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV----VVETTHPEVIAAPVTEQPQVIT 932
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   963 DTVVSEAELTPEAVTAAETAgplgAEEGTEASAAEETTEMVSAVSQLTDSPDttEEATPVQEVEGGVPDIEEQERRTQEV 1042
Cdd:PRK10811  933 ESDVAVAQEVAEHAEPVVEP----QDETADIEEAAETAEVVVAEPEVVAQPA--APVVAEVAAEVETVTAVEPEVAPAQV 1006
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 21493022  1043 LQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASG 1085
Cdd:PRK10811 1007 PEATVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKG 1049
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
605-633 2.97e-06

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 45.33  E-value: 2.97e-06
                           10        20
                   ....*....|....*....|....*....
gi 21493022    605 EGVTPWASFKKMVTPKKRVRRPSESDKED 633
Cdd:pfam03832    1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
PTZ00121 PTZ00121
MAEBL; Provisional
311-965 1.26e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 50.52  E-value: 1.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   311 TSFRKPKEDEVEASEKKKEQEPEKVDT---EEDGKAEVA---SEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQ 384
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETgkaEEARKAEEAkkkAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   385 VSGSQGPSEEKPAPLATEVFDEKIEVHQ-EEVVAEVHVSTVEE--------RTEE-QKTEVEETAGSVPAEELVEMDAEP 454
Cdd:PTZ00121 1162 DARKAEEARKAEDAKKAEAARKAEEVRKaEELRKAEDARKAEAarkaeeerKAEEaRKAEDAKKAEAVKKAEEAKKDAEE 1241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   455 ---QEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLS---KPPEGVVSEVEMLSSQERMKV-----------QGSPLK 517
Cdd:PTZ00121 1242 akkAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAdelKKAEEKKKADEAKKAEEKKKAdeakkkaeeakKADEAK 1321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   518 KLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGAT 597
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAE 1401
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   598 SDGEKKREGVTPWASFKKMVTPKKR---VRRPSESDKEDElDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRKVD 674
Cdd:PTZ00121 1402 EDKKKADELKKAAAAKKKADEAKKKaeeKKKADEAKKKAE-EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAE 1480
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   675 TSVSWEALICVGSSKKRARRGSSSDEEGGPKA----MGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSP 750
Cdd:PTZ00121 1481 EAKKADEAKKKAEEAKKKADEAKKAAEAKKKAdeakKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA 1560
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   751 TE---GEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESWVSIK-----KFIPGRRKKRPDGK 822
Cdd:PTZ00121 1561 EEkkkAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKaeelkKAEEEKKKVEQLKK 1640
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   823 QEQAPVEDAGPTGANEDDSDVPAVvplSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRA 902
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAA---EEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 21493022   903 ATII----EERSPSWISASVTEPLEQVEAEAA------------LLTEEVLEREVIAEEEPPTVTEPLPENREARGDTV 965
Cdd:PTZ00121 1718 AEELkkaeEENKIKAEEAKKEAEEDKKKAEEAkkdeeekkkiahLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEV 1796
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
883-1085 3.86e-08

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 58.51  E-value: 3.86e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   883 ELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVlereVIAEEEPPTVTEPLPENREARG 962
Cdd:PRK10811  857 EQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVV----VVETTHPEVIAAPVTEQPQVIT 932
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   963 DTVVSEAELTPEAVTAAETAgplgAEEGTEASAAEETTEMVSAVSQLTDSPDttEEATPVQEVEGGVPDIEEQERRTQEV 1042
Cdd:PRK10811  933 ESDVAVAQEVAEHAEPVVEP----QDETADIEEAAETAEVVVAEPEVVAQPA--APVVAEVAAEVETVTAVEPEVAPAQV 1006
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 21493022  1043 LQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPEEQAEASG 1085
Cdd:PRK10811 1007 PEATVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKG 1049
WSK pfam03832
WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in ...
605-633 2.97e-06

WSK motif; This short motif is names after three conserved residues found in a WXSXK motif in protein kinase A anchoring proteins.


Pssm-ID: 461069 [Multi-domain]  Cd Length: 29  Bit Score: 45.33  E-value: 2.97e-06
                           10        20
                   ....*....|....*....|....*....
gi 21493022    605 EGVTPWASFKKMVTPKKRVRRPSESDKED 633
Cdd:pfam03832    1 EPVSAWASFKRLVTPRKRSKSSKEQKPEE 29
rne PRK10811
ribonuclease E; Reviewed
913-1083 4.61e-06

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 51.96  E-value: 4.61e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   913 WISASVTEP-----LEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAELTPEAVTAAETAGPLGA 987
Cdd:PRK10811  842 WIRYPVVRPqdvqvEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIA 921
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   988 EEGTEASAAEETTEMVSAVSqltdspdTTEEATPVQEVEGGVPDIEEQERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQ 1067
Cdd:PRK10811  922 APVTEQPQVITESDVAVAQE-------VAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETV 994
                         170
                  ....*....|....*.
gi 21493022  1068 PVQrAEAERPEEQAEA 1083
Cdd:PRK10811  995 TAV-EPEVAPAQVPEA 1009
PTZ00121 PTZ00121
MAEBL; Provisional
311-965 1.26e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 50.52  E-value: 1.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   311 TSFRKPKEDEVEASEKKKEQEPEKVDT---EEDGKAEVA---SEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQ 384
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETgkaEEARKAEEAkkkAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   385 VSGSQGPSEEKPAPLATEVFDEKIEVHQ-EEVVAEVHVSTVEE--------RTEE-QKTEVEETAGSVPAEELVEMDAEP 454
Cdd:PTZ00121 1162 DARKAEEARKAEDAKKAEAARKAEEVRKaEELRKAEDARKAEAarkaeeerKAEEaRKAEDAKKAEAVKKAEEAKKDAEE 1241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   455 ---QEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLS---KPPEGVVSEVEMLSSQERMKV-----------QGSPLK 517
Cdd:PTZ00121 1242 akkAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKAdelKKAEEKKKADEAKKAEEKKKAdeakkkaeeakKADEAK 1321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   518 KLFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGAT 597
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAE 1401
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   598 SDGEKKREGVTPWASFKKMVTPKKR---VRRPSESDKEDElDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPKRKVD 674
Cdd:PTZ00121 1402 EDKKKADELKKAAAAKKKADEAKKKaeeKKKADEAKKKAE-EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAE 1480
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   675 TSVSWEALICVGSSKKRARRGSSSDEEGGPKA----MGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSP 750
Cdd:PTZ00121 1481 EAKKADEAKKKAEEAKKKADEAKKAAEAKKKAdeakKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKA 1560
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   751 TE---GEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESWVSIK-----KFIPGRRKKRPDGK 822
Cdd:PTZ00121 1561 EEkkkAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKaeelkKAEEEKKKVEQLKK 1640
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   823 QEQAPVEDAGPTGANEDDSDVPAVvplSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADGTRA 902
Cdd:PTZ00121 1641 KEAEEKKKAEELKKAEEENKIKAA---EEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK 1717
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 21493022   903 ATII----EERSPSWISASVTEPLEQVEAEAA------------LLTEEVLEREVIAEEEPPTVTEPLPENREARGDTV 965
Cdd:PTZ00121 1718 AEELkkaeEENKIKAEEAKKEAEEDKKKAEEAkkdeeekkkiahLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEV 1796
PTZ00121 PTZ00121
MAEBL; Provisional
110-737 2.04e-05

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 49.75  E-value: 2.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   110 RDSEDVSKrdsdKEMATKSAVVHDITDDGQEETPEIIEQIPSSES--NLEELTQPTESQANDIGFKKVFKFVGFKFTVKK 187
Cdd:PTZ00121 1194 RKAEDARK----AEAARKAEEERKAEEARKAEDAKKAEAVKKAEEakKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQ 1269
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   188 DKTEKPDTVQLLTVKKDEGEGAAGAGDHKDPSLGAGEAASKESEPKQSTEKPEETLKREQSHAEISPPAESGQAVEECKE 267
Cdd:PTZ00121 1270 AAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAK 1349
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   268 EGEEKQEKEPSKSAEsptspvtSETGSTFKKFFTQGWAGWRKKTSFRKPKEDEVEASEKKKEQEPEKVDTEEDGKAEVAS 347
Cdd:PTZ00121 1350 AEAEAAADEAEAAEE-------KAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADE 1422
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   348 EKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEKIEVHQEEVVAEVHVSTVEE- 426
Cdd:PTZ00121 1423 AKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEa 1502
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   427 -RTEEQKTEVEETAGSVPAEELVEMdAEPQEAEPAKELVKLKETCVSGE-------------DPTQGADLSPDEKVLSKP 492
Cdd:PTZ00121 1503 kKAAEAKKKADEAKKAEEAKKADEA-KKAEEAKKADEAKKAEEKKKADElkkaeelkkaeekKKAEEAKKAEEDKNMALR 1581
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   493 PEGVVSEVEMLSSQERMKVQGSplKKLFTSTGLKKLSGKKQKGKRGGGDEEsgEHTQVPADSPDSQEEQKGESSASSPEE 572
Cdd:PTZ00121 1582 KAEEAKKAEEARIEEVMKLYEE--EKKMKAEEAKKAEEAKIKAEELKKAEE--EKKKVEQLKKKEAEEKKKAEELKKAEE 1657
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   573 PEEITCLEKGLAEVQQDGEAEEG--ATSDGEKKREGVTPWASFKKMVTPKKRvRRPSESDKEDELDKVKSATLSSTESTA 650
Cdd:PTZ00121 1658 ENKIKAAEEAKKAEEDKKKAEEAkkAEEDEKKAAEALKKEAEEAKKAEELKK-KEAEEKKKAEELKKAEEENKIKAEEAK 1736
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   651 SEMQEEMKGSVEEPKPEEPKRKVDTSVSWEALICVGSSKKRarrgSSSDEEGGPKAMGGDHQKADEAGKDKETGTDGILA 730
Cdd:PTZ00121 1737 KEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEK----EAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIE 1812

                  ....*..
gi 21493022   731 GSQEHDP 737
Cdd:PTZ00121 1813 GGKEGNL 1819
rne PRK10811
ribonuclease E; Reviewed
846-1007 3.78e-05

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 48.88  E-value: 3.78e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   846 VVPLSEYDAVEREKMEAQQAQKSAEQPEQKAATEVSK-----ELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTE 920
Cdd:PRK10811  847 VVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVsapvvEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTE 926
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   921 PLEQVEAEAAllteeVLEREVIAEEEPptVTEPLPEnreargDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETT 1000
Cdd:PRK10811  927 QPQVITESDV-----AVAQEVAEHAEP--VVEPQDE------TADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVET 993

                  ....*..
gi 21493022  1001 EMVSAVS 1007
Cdd:PRK10811  994 VTAVEPE 1000
rne PRK10811
ribonuclease E; Reviewed
316-464 3.18e-04

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 45.80  E-value: 3.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   316 PKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQEPAESAHEprlsaeyEKVELPSEEQVSGSQGPSEEK 395
Cdd:PRK10811  850 PQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVV-------AEPQPEEVVVVETTHPEVIAA 922
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 21493022   396 PAPLATEVFDEKIEVHQEEVVAEVHVSTVEERTEEQKTEVEETAGSVPAEELVEMDAEPQEAEPAKELV 464
Cdd:PRK10811  923 PVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEV 991
PTZ00121 PTZ00121
MAEBL; Provisional
591-1131 6.22e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 44.75  E-value: 6.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   591 EAEEGATSDGEKKREGVTPWASFKKmvtPKKRVRRPSESDKEDELDKVKSATLSSTESTASEMQEEMKGSVEEPKPEEPK 670
Cdd:PTZ00121 1213 KAEEARKAEDAKKAEAVKKAEEAKK---DAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEK 1289
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   671 RKVDTSVSWEALICVGSSKKRARRGSSSDEegGPKAMGGDHQKADEAGKDKETGTDGILAGSQEH----DPGQGSSSPEQ 746
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEAKKKAEEAKKADE--AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAeaaaDEAEAAEEKAE 1367
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   747 AGSPTEGEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEPGKEESwvsiKKFIPGRRKKRPDGKQEQA 826
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAK----KKAEEKKKADEAKKKAEEA 1443
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   827 PVEDAGPTGANEDDSDVPAVVPLSEYDAVEREKMEAQQAQKSAEQpeQKAATEVSKELSESQVHMMAAAVADGTRAATii 906
Cdd:PTZ00121 1444 KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEA--KKKAEEAKKKADEAKKAAEAKKKADEAKKAE-- 1519
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   907 eerspswisasvteplEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPENREARGDTVVSEAEltpeAVTAAETAGPLG 986
Cdd:PTZ00121 1520 ----------------EAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAE----EAKKAEEDKNMA 1579
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   987 AEEGTEASAAEETTEMVSAVSQLTDSPDTTEEATPVQEVEGGVPDI--EEQERRTQEVLQAVAEKVKEESQLPGTGGPED 1064
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELkkAEEEKKKVEQLKKKEAEEKKKAEELKKAEEEN 1659
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 21493022  1065 VLQPVQRAEAERPEEQAEASGLKKETDVVLKVDAQEAKTEPFTQGKVVGQTTPESFEKAPQVTESIE 1131
Cdd:PTZ00121 1660 KIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
955-1085 1.69e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 43.04  E-value: 1.69e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   955 PENREA----RGDTVVSE--AELTPEAVTAAETAG------------PLGAEEGTEASAAE--ETTEMVSAVSQLTDSPD 1014
Cdd:PRK13108  276 PKGREApgalRGSEYVVDeaLEREPAELAAAAVASaasavgpvgpgePNQPDDVAEAVKAEvaEVTDEVAAESVVQVADR 355
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 21493022  1015 TTEEATPVQEVEGgvPDIEEQERRTQEVLQAVAEKVKEESQLPGTGGPEDvlQPVQRAEAERPEEQAEASG 1085
Cdd:PRK13108  356 DGESTPAVEETSE--ADIEREQPGDLAGQAPAAHQVDAEAASAAPEEPAA--LASEAHDETEPEVPEKAAP 422
PTZ00121 PTZ00121
MAEBL; Provisional
623-1325 8.37e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 41.28  E-value: 8.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   623 VRRPSESDKEDELDKVKSATLSSTESTASEMQ--EEMKGSVEEPKPEEPKRKVDTSVSWEALICVGSSKKRARRGSSSDE 700
Cdd:PTZ00121 1187 VRKAEELRKAEDARKAEAARKAEEERKAEEARkaEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFA 1266
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   701 EGGPKAMGGDHQKADEAGKDKETGTDGILAGSQEHDPGQGSSSPEQAGSPTEGEGVSTWESFKRlvtPRKKSKSKLEEKS 780
Cdd:PTZ00121 1267 RRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKK---ADAAKKKAEEAKK 1343
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   781 EDSIAGSGVEHSTPDTEPGKEESWVSIKKFIPGRRKKRPDGKQ-EQAPVEDAGPTGANEDDSDVpavvplSEYDAVEREK 859
Cdd:PTZ00121 1344 AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKaEEKKKADEAKKKAEEDKKKA------DELKKAAAAK 1417
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   860 MEAQQAQKSAEqpEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPswisasvtepleqvEAEAALLTEEVLER 939
Cdd:PTZ00121 1418 KKADEAKKKAE--EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAE--------------EAKKADEAKKKAEE 1481
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022   940 EVIAEEEPPTVTEPLPENREARGdtvVSEAELTPEAVTAAETAgplgaEEGTEASAAEETTEmvsavsqltdspdtTEEA 1019
Cdd:PTZ00121 1482 AKKADEAKKKAEEAKKKADEAKK---AAEAKKKADEAKKAEEA-----KKADEAKKAEEAKK--------------ADEA 1539
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022  1020 TPVQEVEGGVPDIEEQERRTQEVLQAVAEKVKEEsqlpgtggpEDVLQPVQRAEAERPEEQAEASGLKKETDVVLKVDAQ 1099
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKAEEKKKAEEAKKAE---------EDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAE 1610
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022  1100 EAKTEPFTQGKVVGQTTPESFEKAPQVTESIESSELVTTCQ---AETLAGVKSQEMVMEQAIPPDSVETPTDSETDGSTP 1176
Cdd:PTZ00121 1611 EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEElkkAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKA 1690
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022  1177 V-ADFDAPGTTQKDEIVEIHEENEVASGTQSGGTEAEAVP--------AQKERPPAPSSFVFQEETKEQSKMEDTLEHTD 1247
Cdd:PTZ00121 1691 AeALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIkaeeakkeAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKA 1770
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21493022  1248 KEVSVETVSILSktEGTQEADQY----ADEKTKDV--PFFEGLEGSIDTGITVSREKVTEVALKGEGTEEAECKKDDALE 1321
Cdd:PTZ00121 1771 EEIRKEKEAVIE--EELDEEDEKrrmeVDKKIKDIfdNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADA 1848

                  ....
gi 21493022  1322 LQSH 1325
Cdd:PTZ00121 1849 FEKH 1852
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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